Pregenerated sensors for TPSAB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024173Ensembl transcript IDs: ENSMUST00000146856.3, ENSMUST00000153118.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGGAGGACAGCCCAGAGGGTCTTTAGTGGGCCATCTGGTCAGTaGCGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RRRTAQRVFSGPSGQ*RAGAEAVISLSTAG Trigger: GCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGTCACTGACCAGATGGCCCACTAAAGACCCTCTGGGCTGTCCTCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | ACGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTGGCTCTaGCCTAGGCTGGATAGAGGATTCCAGTGGAGCCCTGGTTGGACA | + |
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Preference number: 1 (lower is better) Translates to: TGRGRGSYLPQHRWL*PRLDRGFQWSPGWT Trigger: TGTCCAACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | TCAGTGACGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTaGCTCTGGCCTAGGCTGGATAGAGGATTCCAGTGGAGCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: SVTGRGRGSYLPQHR*LWPRLDRGFQWSPG Trigger: ACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGTCACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | CCTCAGCACCGCTGGCTCTGGCCTAGGCTGGATAGAGGATTCCAGTaGAGCCCTGGTTGGACACTATTCTCCTGCCCCACCTCTGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: PQHRWLWPRLDRGFQ*SPGWTLFSCPTSVY Trigger: GTACACAGAGGTGGGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 90 bp | CTGCTCACAAGTCCCTCTTTGAGTCCGGCCCATGGCATTCAGCTCTaGCAACCTGGCTTCTTCCTCCAGGCTGGACCTGGATTTCCGACC | + |
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Preference number: 1 (lower is better) Translates to: LLTSPSLSPAHGIQL*QPGFFLQAGPGFPT Trigger: GGTCGGAAATCCAGGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCATGGGCCGGACTCAAAGAGGGACTTGTGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 90 bp | CTGCCCCACCTCTGTGTACAGAGAGACTGGATCCTTCCTGTGGTCTaGAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCTAAAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: LPHLCVQRDWILPVV*SQGLPAHGPIPKAL Trigger: TAGAGCTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCACAGGAAGGATCCAGTCTCTCTGTACACAGAGGTGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | TTCTCCTGCCCCACCTCTGTGTACAGAGAGACTGGATCCTTCCTGTaGTCTGCAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: FSCPTSVYRETGSFL*SAARVCLLMALSLK Trigger: CTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCACAGGAAGGATCCAGTCTCTCTGTACACAGAGGTGGGGCAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | GCAGAGGCAGTTATCTCCCTCAGCACCGCTGGCTCTGGCCTAGGCTaGATAGAGGATTCCAGTGGAGCCCTGGTTGGACACTATTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: AEAVISLSTAGSGLG*IEDSSGALVGHYSP Trigger: AGGAGAATAGTGTCCAACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | GGCCCATGGCATTCAGCTCTGCCAACCTGGCTTCTTCCTCCAGGCTaGACCTGGATTTCCGACCTTATTCAGAGAAGGAGGACAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GPWHSALPTWLLPPG*TWISDLIQRRRTAQ Trigger: CTGGGCTGTCCTCCTTCTCTGAATAAGGTCGGAAATCCAGGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCATGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | TGGCATTCAGCTCTGCCAACCTGGCTTCTTCCTCCAGGCTGGACCTaGATTTCCGACCTTATTCAGAGAAGGAGGACAGCCCAGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: WHSALPTWLLPPGWT*ISDLIQRRRTAQRV Trigger: GACCCTCTGGGCTGTCCTCCTTCTCTGAATAAGGTCGGAAATCCAGGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | TCTGAGGATAGTTCTGCTCACAAGTCCCTCTTTGAGTCCGGCCCATaGCATTCAGCTCTGCCAACCTGGCTTCTTCCTCCAGGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: SEDSSAHKSLFESGP*HSALPTWLLPPGWT Trigger: GGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCATGGGCCGGACTCAAAGAGGGACTTGTGAGCAGAACTATCCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 90 bp | GTAGGGGGACAGGGTGGACATAGTCAGAAATGTTCACAGGGTTTGTaGGTTTCAGCAGGGCAATGTCTGCCCCATCCTGGACGATGTAGA | + |
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Preference number: 1 (lower is better) Translates to: VGGQGGHSQKCSQGL*VSAGQCLPHPGRCR Trigger: TCTACATCGTCCAGGATGGGGCAGACATTGCCCTGCTGAAACTCACAAACCCTGTGAACATTTCTGACTATGTCCACCCTGTCCCCCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 90 bp | AGAAAGACCATTTTGTGGGCAGAGTCTCAGGTTGGCAAGCTGGGATaGGCTCAGCTAACCCCGTTCTCTGAGGATAGTTCTGCTCACAAG | + |
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Preference number: 1 (lower is better) Translates to: RKTILWAESQVGKLG*AQLTPFSEDSSAHK Trigger: CTTGTGAGCAGAACTATCCTCAGAGAACGGGGTTAGCTGAGCCCATCCCAGCTTGCCAACCTGAGACTCTGCCCACAAAATGGTCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 90 bp | TTGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTTTACTGTAGGTaGAAGAAAGACCATTTTGTGGGCAGAGTCTCAGGTTGGCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LHLLQRKWWRQVYCR*KKDHFVGRVSGWQA Trigger: AGCTTGCCAACCTGAGACTCTGCCCACAAAATGGTCTTTCTTTCACCTACAGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCGCCCTAGAGAGGATAGGGGTCAGTACTCCTGTAAAGGCTGGGTAGGGGTGGGGCCATCTGGTCAGTaGCGGGCAGGGGCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SRPREDRGQYSCKGWVGVGPSGQ*RAGAEA Trigger: TGCCTCTGCCCCTGCCCGTCACTGACCAGATGGCCC...CACCCCTACCCAGCCTTTACAGGAGTACTGACCCCTATCCTCTCTAGGGCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCTGCAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCTAAAGCTCTACTCAAGGCAAACTGGTGCTaGAGGCTCCCAAGGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VVCSQGLPAHGPIPKALLKANWC*RLPREQ Trigger: TTGCTCCCTTGGGAGCCTCCAGCACCAGTTTGCCTT...GAGTAGAGCTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR GCA 90 bp | ACCATTTTGTGGGCAGAGTCTCAGGTTGGCAAGCTGGGATGGGCTCAGCTAACCATCCTTCCTGTGGTCTaGAGCCAGGGTCTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TILWAESQVGKLGWAQLTILPVV*SQGLPA Trigger: AGCAGGCAGACCCTGGCTGCAGACCACAGGAAGGAT...GGTTAGCTGAGCCCATCCCAGCTTGCCAACCTGAGACTCTGCCCACAAAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTTGTGGGCAGAGTCTCAGGTTGGCAAGCTGGGATGGGCTCAGCTAACCCAGTGGAGCCCTGGTTaGACACTATTCTCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TILWAESQVGKLGWAQLTQWSPG*TLFSCP Trigger: GGGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTG...GGTTAGCTGAGCCCATCCCAGCTTGCCAACCTGAGACTCTGCCCACAAAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGACAGCAGGGCAATGTCTaGCCCATCCTGGACGATGTA | + |
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Preference number: 2 (lower is better) Translates to: APAQCSYLSGRQKNWDSGQQGNV*PILDDV Trigger: TACATCGTCCAGGATGGGGCAGACATTGCCCTGCTG...TCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCGCCCTAGAGAGGATAGGGGTCAGTACTCCTGTAAAGGCTGGGTAGGGGTGTGTGTACAGAGAGACTaGATCCTTCCTGTGGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRPREDRGQYSCKGWVGVCVQRD*ILPVVC Trigger: GCAGACCACAGGAAGGATCCAGTCTCTCTGTACACA...CACCCCTACCCAGCCTTTACAGGAGTACTGACCCCTATCCTCTCTAGGGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CAA 90 bp | GGAAATGGTGGCGGCAGGTTTACTGTAGGTGAAAGAAAGACCATTTaGTGGGCAGAGTCTCAGGTTGGCAAGCTGGGATGGGCTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: GNGGGRFTVGERKTI*WAESQVGKLGWAQL Trigger: TAGCTGAGCCCATCCCAGCTTGCCAACCTGAGACTCTGCCCACAAAATGGTCTTTCTTTCACCTACAGTAAACCTGCCGCCACCATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR GCA 90 bp | TCCGAAATACAAGCATACTGTGGTCCCTTCAGACATGAAGTGTCTGAGATTAGATGGAGGGAAGCCCTGTaGTGTGGATGGGCGTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: SEIQAYCGPFRHEVSEIRWREAL*CGWAWP Trigger: CGGCCACGCCCATCCACAGCACAGGGCTTCCCTCCA...TCTAATCTCAGACACTTCATGTCTGAAGGGACCACAGTATGCTTGTATTTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTTCTTCCTCCAGGCTGGACCTGGATTTCCGACCTTATTCAGAGAAGGAATTAGAGGGGTCGAATaGCTTATGGTAGCTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: PGFFLQAGPGFPTLFREGIRGVE*LMVATL Trigger: CAGGGTAGCTACCATAAGTCATTCGACCCCTCTAAT...TCCTTCTCTGAATAAGGTCGGAAATCCAGGTCCAGCCTGGAGGAAGAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR TCA 90 bp | ACCATTTTGTGGGCAGAGTCTCAGGTTGGCAAGCTGGGATGGGCTCAGCTAACCAGTTGTCAAAAGAAATaGAGTAAGACCACTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TILWAESQVGKLGWAQLTSCQKK*SKTTRE Trigger: CTCCCTAGTGGTCTTACTTCATTTCTTTTGACAACT...GGTTAGCTGAGCCCATCCCAGCTTGCCAACCTGAGACTCTGCCCACAAAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CAA 90 bp | TTTGTGATACTTCAAGTCACAAAGGTGGTTTTCTATAATGGGAACTaGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTTTACTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: FVILQVTKVVFYNGN*HLLQRKWWRQVYCR Trigger: CCTACAGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCACCTTTGTGACTTGAAGTATCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCAGTGACGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTGGCTCCAGTGGAGCCCTGGTaGGACACTATTCTCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LVSDGQGQRQLSPSAPLAPVEPW*DTILLP Trigger: GGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTGG...AGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGTCACTGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | GGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTaGCTCTGGCCTAGGCTGGATAGAGGATTCCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GRGRGSYLPQHR*LWPRLDRGFQW Trigger: CCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | ACAGCCCAGAGGGTCTTTAGTGGGCCATCTGGTCAGTaGCGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: TAQRVFSGPSGQ*RAGAEAVISLS Trigger: GCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGTCACTGACCAGATGGCCCACTAAAGACCCTCTGGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | CGCTGGCTCTGGCCTAGGCTGGATAGAGGATTCCAGTaGAGCCCTGGTTGGACACTATTCTCCTGCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: RWLWPRLDRGFQ*SPGWTLFSCPT Trigger: GGTGGGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | GGCAGAGGCAGTTATCTCCCTCAGCACCGCTGGCTCTaGCCTAGGCTGGATAGAGGATTCCAGTGGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: GRGSYLPQHRWL*PRLDRGFQWSP Trigger: AGGGCTCCACTGGAATCCTCTATCCAGCCTAGGCCAGAGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 72 bp | AGTCCCTCTTTGAGTCCGGCCCATGGCATTCAGCTCTaGCAACCTGGCTTCTTCCTCCAGGCTGGACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SPSLSPAHGIQL*QPGFFLQAGPG Trigger: TCCAGGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCATGGGCCGGACTCAAAGAGGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | CAAAGTTGGAGGGAAGCCCTGTGCTGTGGATGGGCGTaGCCGCTCCCTCACCTGTCTAACCTCAGTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QSWREALCCGWA*PLPHLSNLSCL Trigger: GAGACAACTGAGGTTAGACAGGTGAGGGAGCGGCCACGCCCATCCACAGCACAGGGCTTCCCTCCAACTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 72 bp | CTCTGTGTACAGAGAGACTGGATCCTTCCTGTGGTCTaGAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCT | + |
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Preference number: 3 (lower is better) Translates to: LCVQRDWILPVV*SQGLPAHGPIP Trigger: AGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCACAGGAAGGATCCAGTCTCTCTGTACACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | ATCCTACAAAGTTGGAGGGAAGCCCTGTGCTGTGGATaGGCGTGGCCGCTCCCTCACCTGTCTAACCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ILQSWREALCCG*AWPLPHLSNLS Trigger: ACTGAGGTTAGACAGGTGAGGGAGCGGCCACGCCCATCCACAGCACAGGGCTTCCCTCCAACTTTGTAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | CACTTCCGAGGTCTTCAGCTTTCCATCCTACAAAGTTaGAGGGAAGCCCTGTGCTGTGGATGGGCGTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: HFRGLQLSILQS*REALCCGWAWP Trigger: CGGCCACGCCCATCCACAGCACAGGGCTTCCCTCCAACTTTGTAGGATGGAAAGCTGAAGACCTCGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 72 bp | GAGACTGGATCCTTCCTGTGGTCTGCAGCCAGGGTCTaGCTGCTCATGGCCCTATCCCTAAAGCTCTACTCT | + |
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Preference number: 3 (lower is better) Translates to: ETGSFLWSAARV*LLMALSLKLYS Trigger: AGAGTAGAGCTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCACAGGAAGGATCCAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | ACTATTCTCCTGCCCCACCTCTGTGTACAGAGAGACTaGATCCTTCCTGTGGTCTGCAGCCAGGGTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TILLPHLCVQRD*ILPVVCSQGLP Trigger: AGGCAGACCCTGGCTGCAGACCACAGGAAGGATCCAGTCTCTCTGTACACAGAGGTGGGGCAGGAGAATAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR GCA 72 bp | GGATTCCAGTGGAGCCCTGGTTGGACACTATTCTCCTaGCCCACCTCTGTGTACAGAGAGACTGGATCCTTC | + |
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Preference number: 3 (lower is better) Translates to: GFQWSPGWTLFS*PTSVYRETGSF Trigger: GAAGGATCCAGTCTCTCTGTACACAGAGGTGGGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTGGAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | CCTAGGCTGGATAGAGGATTCCAGTGGAGCCCTGGTTaGACACTATTCTCCTGCCCCACCTCTGTGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: PRLDRGFQWSPG*TLFSCPTSVYR Trigger: TCTGTACACAGAGGTGGGGCAGGAGAATAGTGTCCAACCAGGGCTCCACTGGAATCCTCTATCCAGCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | AGTTCTGCTCACAAGTCCCTCTTTGAGTCCGGCCCATaGCATTCAGCTCTGCCAACCTGGCTTCTTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SSAHKSLFESGP*HSALPTWLLPP Trigger: TGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATGCCATGGGCCGGACTCAAAGAGGGACTTGTGAGCAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | CATTCAGCTCTGCCAACCTGGCTTCTTCCTCCAGGCTaGACCTGGATTTCCGACCTTATTCAGAGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: HSALPTWLLPPG*TWISDLIQRRR Trigger: CCTCCTTCTCTGAATAAGGTCGGAAATCCAGGTCCAGCCTGGAGGAAGAAGCCAGGTTGGCAGAGCTGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | CAGGGTGGACATAGTCAGAAATGTTCACAGGGTTTGTaGGTTTCAGCAGGGCAATGTCTGCCCCATCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: QGGHSQKCSQGL*VSAGQCLPHPG Trigger: TCCAGGATGGGGCAGACATTGCCCTGCTGAAACTCACAAACCCTGTGAACATTTCTGACTATGTCCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CCA 72 bp | GGTCGAATGACTTATGGTAGCTACCCTGGGGTATCCTaGCTTATGGACCCTGAAATCCCTGATGTCCTGATG | + |
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Preference number: 3 (lower is better) Translates to: GRMTYGSYPGVS*LMDPEIPDVLM Trigger: CATCAGGACATCAGGGATTTCAGGGTCCATAAGCCAGGATACCCCAGGGTAGCTACCATAAGTCATTCGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | TTCAGACATGAAGTGTCTGAGATTAGAGGGGTCGAATaGCTTATGGTAGCTACCCTGGGGTATCCTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: FRHEVSEIRGVE*LMVATLGYPGL Trigger: TAAGCCAGGATACCCCAGGGTAGCTACCATAAGTCATTCGACCCCTCTAATCTCAGACACTTCATGTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | CTGCCTGCTCATGGCCCTATCCCTAAAGCTCTACTCTaGGTTGTCAAAAGAAATGAAGTAAGACCACTAGGG | + |
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Preference number: 3 (lower is better) Translates to: LPAHGPIPKALL*VVKRNEVRPLG Trigger: CCCTAGTGGTCTTACTTCATTTCTTTTGACAACTCAGAGTAGAGCTTTAGGGATAGGGCCATGAGCAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | CTTCAAAGGAAATGGTGGCGGCAGGTTTACTGTAGGTaGAAGAAAGACCATTTTGTGGGCAGAGTCTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LQRKWWRQVYCR*KKDHFVGRVSG Trigger: ACCTGAGACTCTGCCCACAAAATGGTCTTTCTTTCACCTACAGTAAACCTGCCGCCACCATTTCCTTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR-3UTR CAA 90 bp | ATAATGGGAACTTGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTTTACTGTAGAAAGAAAGACCATTTaGTGGGCAGAGTCTCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: IMGTCTSFKGNGGGRFTVERKTI*WAESQV Trigger: AACCTGAGACTCTGCCCACAAAATGGTCTTTCTTTC...TACAGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR TCA 72 bp | ACAATGTGGACATTGTCACCTGTGATGAGACCTTTGTaGTACTTCAAGTCACAAAGGTGGTTTTCTATAATG | + |
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Preference number: 3 (lower is better) Translates to: TMWTLSPVMRPL*YFKSQRWFSIM Trigger: CATTATAGAAAACCACCTTTGTGACTTGAAGTATCACAAAGGTCTCATCACAGGTGACAATGTCCACATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR GCA 90 bp | GTGGTCTGCAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCTAAAGCTCTACTCCAACATCCCGGGGGCTaGATGCACCAGGCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: VVCSQGLPAHGPIPKALLQHPGG*MHQAGQ Trigger: CTGTCCAGCCTGGTGCATGCAGCCCCCGGGATGTTG...GAGTAGAGCTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR GCA 90 bp | AGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACAGCTGGACCGGGGGCTaGATGCACCAGGCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: RAAPAQCSYLSGRQKNWDSWTGG*MHQAGQ Trigger: CTGTCCAGCCTGGTGCATGCAGCCCCCGGTCCAGCT...GTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR TCA 90 bp | CTGTGCTGTGGATGGGCGTGGCCGCTCCCTCACCTGTCTAACCTCAGTTGTCTCAGCATTTGGACACAGTaGGGAGTAGTGCGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCCGWAWPLPHLSNLSCLSIWTQ*GVVRAQ Trigger: CTGGGCCCGCACTACTCCTCACTGTGTCCAAATGCT...GAGACAACTGAGGTTAGACAGGTGAGGGAGCGGCCACGCCCATCCACAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGCTGACCACGCCTGCCTaGAGCCAGGTGTCTTCTACC | + |
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Preference number: 4 (lower is better) Translates to: QRAAPAQCSYLSGRQKNWLTTPA*SQVSST Trigger: GGTAGAAGACACCTGGCTGCAGGCAGGCGTGGTCAG...CCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCTCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR GCA 90 bp | GCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGAAGGCCTGTTGGGCTGTaGGCAGTCCTCACCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: APAQCSYLSGRQKNWDSGRPVGL*AVLTPA Trigger: AGCTGGGGTGAGGACTGCGCACAGCCCAACAGGCCT...TCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAAACTGGTGCTGGAGGCTCCCAAGGGAGCAATCTAGCCCCACACAATACACAGGAGGGGCAGCGTaGGCAGCAGCAGCTTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KANWCWRLPREQSSPTQYTGGAA*AAAALA Trigger: TGCTAAAGCTGCTGCTGCTCACGCTGCCCCTCCTGT...GTATTGTGTGGGGCTAGATTGCTCCCTTGGGAGCCTCCAGCACCAGTTTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR TCA 90 bp | CCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGCACAGTGTGCCGCAGTaGGCACCCACTGTGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PAQCSYLSGRQKNWDSGWHSVPQ*APTVGG Trigger: TCCACCCACAGTGGGTGCTCACTGCGGCACACTGTG...CCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| 3UTR CAA 72 bp | CCACTTCCGAGGTCTTCAGCTTTCCATCCTACAAAGTaGGAGGGAAGCCCTGTGCTGTGGATGGGCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLPRSSAFHPTK*EGSPVLWMGVA Trigger: GGCCACGCCCATCCACAGCACAGGGCTTCCCTCCAACTTTGTAGGATGGAAAGCTGAAGACCTCGGAAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR TCA 90 bp | GCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGAAGCATTTGGACACAGTaGGGAGTAGTGCGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: APAQCSYLSGRQKNWDSGSIWTQ*GVVRAQ Trigger: CTGGGCCCGCACTACTCCTCACTGTGTCCAAATGCT...TCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146856.3 ENSMUST00000153118.2 |
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| CDS-3UTR TCA 90 bp | CCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGACAGGAGGGGCAGCGTaGGCAGCAGCAGCTTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAQCSYLSGRQKNWDSGWTGGAA*AAAALA Trigger: TGCTAAAGCTGCTGCTGCTCACGCTGCCCCTCCTGT...CCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146856.3 ENSMUST00000153118.2 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGCAGCAGGGCAATGTCTaGCCCATCCTGGACGATGTA | + |
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Preference number: 4 (lower is better) Translates to: QRAAPAQCSYLSGRQKNWQQGNV*PILDDV Trigger: TACATCGTCCAGGATGGGGCAGACATTGCCCTGCTG...CCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR GCA 90 bp | CAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGGGAGCAAGGTGTCTTCTACCTTaGAGACCAGAGGTCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QCSYLSGRQKNWDSGWGARCLLP*RPEVLR Trigger: CCGGAGGACCTCTGGTCTGCAAGGTAGAAGACACCT...TGCTCCCCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR CCA 90 bp | AGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACCTTCAAAGGAAATGGTaGCGGCAGGTTTACACCATT | + |
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Preference number: 4 (lower is better) Translates to: RAAPAQCSYLSGRQKNWDLQRKW*RQVYTI Trigger: AATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAG...GTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR TCA 90 bp | AGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACGTGATGAGACCTTTGTaGTACTTCAAGTCACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RAAPAQCSYLSGRQKNWDVMRPL*YFKSQR Trigger: CCTTTGTGACTTGAAGTATCACAAAGGTCTCATCAC...GTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGGGAGCAGGGTGTGTGATGATCTaGCTCACATTCATCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QCSYLSGRQKNWDSGWGAGCVMI*LTFIRW Trigger: CCACCTGATGAATGTGAGCCAGATCATCACACACCC...TGCTCCCCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR TCA 90 bp | CAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGGGAGCATGTTCACAGGGTTTGTaGGTTTCAGCAGGGCAATGT | + |
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Preference number: 4 (lower is better) Translates to: QCSYLSGRQKNWDSGWGACSQGL*VSAGQC Trigger: ACATTGCCCTGCTGAAACTCACAAACCCTGTGAACA...TGCTCCCCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| 3UTR CAA 72 bp | CTGTCTAACCTCAGTTGTCTCTACTACATACCACCATaGTCGATGTTACCCCAGCCTGTCACCCAGCACAAC | + |
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Preference number: 4 (lower is better) Translates to: LSNLSCLYYIPP*SMLPQPVTQHN Trigger: GTTGTGCTGGGTGACAGGCTGGGGTAACATCGACAATGGTGGTATGTAGTAGAGACAACTGAGGTTAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR GCA 90 bp | CAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGGGAGCATCTATAATGGGAACTTaGACCTCCTTCAAAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QCSYLSGRQKNWDSGWGASIMGT*TSFKGN Trigger: ATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGA...TGCTCCCCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| 3UTR CAA 72 bp | CACAATACCACAGCCCATGAAGTGCTGCTGGAGACATaGTTGGTAAGTGTGATCGGACTCTTTCTCAATCAA | + |
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Preference number: 4 (lower is better) Translates to: HNTTAHEVLLET*LVSVIGLFLNQ Trigger: TTGATTGAGAAAGAGTCCGATCACACTTACCAACAATGTCTCCAGCAGCACTTCATGGGCTGTGGTATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| 3UTR CAA 72 bp | CTTCAAGTCACAAAGGTGGTTTTCTATAATGGGAACTaGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LQVTKVVFYNGN*HLLQRKWWRQV Trigger: AACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCACCTTTGTGACTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR CAA 90 bp | CTGGTCAGTGACGGGCAGGGGCAGAGGCAGTTATCTCCCTCAGCACCGCTGGCTTGTACTCTGACCTTGTaGGGGTCAGCAACATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LVSDGQGQRQLSPSAPLACTLTL*GSATSR Trigger: CCGGGATGTTGCTGACCCCAACAAGGTCAGAGTACA...AGCCAGCGGTGCTGAGGGAGATAACTGCCTCTGCCCCTGCCCGTCACTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR CAA 90 bp | GTGGTCTGCAGCCAGGGTCTGCCTGCTCATGGCCCTATCCCTAAAGCTCTACTCGTAGTGCGGGCCCAGTaGGAGGTGAGGGCTAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: VVCSQGLPAHGPIPKALLVVRAQ*EVRASL Trigger: TAGACTAGCCCTCACCTCCAACTGGGCCCGCACTAC...GAGTAGAGCTTTAGGGATAGGGCCATGAGCAGGCAGACCCTGGCTGCAGACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146856.3 |
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| CDS-3UTR CAA 90 bp | AGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACGTAGTGCGGGCCCAGTaGGAGGTGAGGGCTAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: RAAPAQCSYLSGRQKNWDVVRAQ*EVRASL Trigger: TAGACTAGCCCTCACCTCCAACTGGGCCCGCACTAC...GTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146856.3 ENSMUST00000153118.2 |
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| CDS-3UTR CAA 90 bp | CAGAGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGTGTACTCTGACCTTGTaGGGGTCAGCAACATCCGGT | + |
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Preference number: 5 (lower is better) Translates to: QRAAPAQCSYLSGRQKNWCTLTL*GSATSG Trigger: ACCGGATGTTGCTGACCCCAACAAGGTCAGAGTACA...CCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR CAA 90 bp | CAGAGAGCGGCGCCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGCGGACAATGTGGACATaGTCACCTGTGATGAGACCT | + |
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Preference number: 5 (lower is better) Translates to: QRAAPAQCSYLSGRQKNWRTMWT*SPVMRP Trigger: AGGTCTCATCACAGGTGACAATGTCCACATTGTCCG...CCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGCTCTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CCA 90 bp | GTGGTTTTCTATAATGGGAACTTGCACCTCCTTCAAAGGAAATGGTaGCGGCAGGTTTACACCATTGTCGATGTTACCCCAGCCTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: VVFYNGNLHLLQRKW*RQVYTIVDVTPACH Trigger: GTGACAGGCTGGGGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CCA 90 bp | AAGGTGGTTTTCTATAATGGGAACTTGCACCTCCTTCAAAGGAAATaGTGGCGGCAGGTTTACACCATTGTCGATGTTACCCCAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: KVVFYNGNLHLLQRK*WRQVYTIVDVTPAC Trigger: ACAGGCTGGGGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS-3UTR CAA 90 bp | CCTGCGCAGTGTAGCTACTTGAGTGGAAGGCAGAAGAATTGGGACTCAGGATGGTTCTATAATGGGAACTaGCACCTCCTTCAAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PAQCSYLSGRQKNWDSGWFYNGN*HLLQRK Trigger: TTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAA...CCATCCTGAGTCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS TCA 72 bp | AGCGTGAGCAGCAGCAGCTTTAGCATTTGGACACAGTaGGGAGTAGTGCGGGCCCAGTTGGAGGTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVSSSSFSIWTQ*GVVRAQLEVRA Trigger: AGCCCTCACCTCCAACTGGGCCCGCACTACTCCTCACTGTGTCCAAATGCTAAAGCTGCTGCTGCTCACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146856.3 ENSMUST00000153118.2 |
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| CDS CAA 90 bp | ACTTGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTTTACACCATaGTCGATGTTACCCCAGCCTGTCACCCAGCACAACGTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TCTSFKGNGGGRFTP*SMLPQPVTQHNVPE Trigger: CTCAGGAACGTTGTGCTGGGTGACAGGCTGGGGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CAA 72 bp | TCCTTCAAAGGAAATGGTGGCGGCAGGTTTACACCATaGTCGATGTTACCCCAGCCTGTCACCCAGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: SFKGNGGGRFTP*SMLPQPVTQHN Trigger: GTTGTGCTGGGTGACAGGCTGGGGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CCA 72 bp | TATAATGGGAACTTGCACCTCCTTCAAAGGAAATGGTaGCGGCAGGTTTACACCATTGTCGATGTTACCCCA | + |
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Preference number: 6 (lower is better) Translates to: YNGNLHLLQRKW*RQVYTIVDVTP Trigger: TGGGGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CCA 72 bp | TTCTATAATGGGAACTTGCACCTCCTTCAAAGGAAATaGTGGCGGCAGGTTTACACCATTGTCGATGTTACC | + |
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Preference number: 6 (lower is better) Translates to: FYNGNLHLLQRK*WRQVYTIVDVT Trigger: GGTAACATCGACAATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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| CDS CAA 90 bp | TTTGTGATACTTCAAGTCACAAAGGTGGTTTTCTATAATGGGAACTaGCACCTCCTTCAAAGGAAATGGTGGCGGCAGGTTTACACCATT | + |
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Preference number: 6 (lower is better) Translates to: FVILQVTKVVFYNGN*HLLQRKWWRQVYTI Trigger: AATGGTGTAAACCTGCCGCCACCATTTCCTTTGAAGGAGGTGCAAGTTCCCATTATAGAAAACCACCTTTGTGACTTGAAGTATCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153118.2 |
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