Pregenerated sensors for TPRN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048707Ensembl transcript IDs: ENSMUST00000114336.4
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAAGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATaGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: DKICSGLHLITDETV*TDVSLSHRQFPPVH Trigger: ATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR TCA 90 bp | TGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTaGGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGTAACAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: CQPVPQAVPTCSSLV*DSDLALKAKGGNRE Trigger: CTCTCTGTTACCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR-3UTR TCA 90 bp | CTCGCAGTGGCCACTCCTCAAAAGGTAGGAGCTGAAATTTCCGACAGCACTCTGCCACCTCATCACAGATaGGACAGTATGGACAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LAVATPQKVGAEISDSTLPPHHR*DSMDRC Trigger: ACATCTGTCCATACTGTCTCATCTGTGATGAGGTGG...CAGAGTGCTGTCGGAAATTTCAGCTCCTACCTTTTGAGGAGTGGCCACTGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTCAAAAGGTAGGAGCTGAAATTTCCGACAGCACTCTGGGACAAGATCTGTGTTCATCCTTGGTGTaGGATTCAGATCTGGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: TPQKVGAEISDSTLGQDLCSSLV*DSDLAL Trigger: TAGGGCCAGATCTGAATCTCACACCAAGGATGAACA...CAGATCTTGTCCCAGAGTGCTGTCGGAAATTTCAGCTCCTACCTTTTGAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR TCA 72 bp | AGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTaGCTGGCTTCCAGGACCACCACACCTGGGGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: RGAQNTVRAPGY*LASRTTTPGAK Trigger: CTTAGCCCCAGGTGTGGTGGTCCTGGAAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR CCA 72 bp | GGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTaGCTTCCAGGACCACCACACCTGGGGCTAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: GHRIQSGLLGID*LPGPPHLGLSL Trigger: AAGACTTAGCCCCAGGTGTGGTGGTCCTGGAAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR CCA 72 bp | TGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATaGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: CSGLHLITDETV*TDVSLSHRQFP Trigger: TGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| 3UTR TCA 72 bp | GTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTaGGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: VPQAVPTCSSLV*DSDLALKAKGG Trigger: ACCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTCCAGACTGGGAGTGGCACTaGCTGGGCTGGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QVEGHRIQSGLLGIDWLPDWEWH*LGWALG Trigger: TCCCAGCGCCCAGCCCAGCCAGTGCCACTCCCAGTC...TGGAAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTAGGCGAAATAGGGGGTaGGGGCTGGCTGAGGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SQVEGHRIQSGLLGIDWLRRNRG*GLAEAH Trigger: GTGCGCCTCAGCCAGCCCGCACCCCCTATTTCGCCT...AAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTCCAGGTTGGCCAGGGCCCTaGCCTGAAGGTCCCCGATTG | + |
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Preference number: 4 (lower is better) Translates to: QVEGHRIQSGLLGIDWLPGWPGP*PEGPRL Trigger: CAATCGGGGACCTTCAGGCCAGGGCCCTGGCCAACC...TGGAAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGAGACACGGCCGGGCTGTaGCGCCTCGTACACTACTAC | + |
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Preference number: 4 (lower is better) Translates to: QMSACPTGSSHLFILGVRDTAGL*RLVHYY Trigger: GTAGTAGTGTACGAGGCGCCACAGCCCGGCCGTGTC...TCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGGGCGCTGACTGGGAGTaGCACTGGCTGGGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRGADWE*HWLGWA Trigger: CGCCCAGCCCAGCCAGTGCCACTCCCAGTCAGCGCC...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | ACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGTCGGTTCAGGAGTTCTaGGGTGTGTCCAGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TDVSLSHRQFPPVHPWCESVQEF*GVSRPG Trigger: GCCAGGCCTGGACACACCTCAGAACTCCTGAACCGA...CTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | CAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGAGTAGCTGGACAGACCTaGGCTGCTCTCAGGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QMSACPTGSSHLFILGVRVAGQT*AALRSH Trigger: GTGGGACCTGAGAGCAGCTCAGGTCTGTCCAGCTAC...TCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | ACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGTCCAGGCCTGGCAGGGTaGAGGTGGTACTGGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSSQMRQYGQMSACPTGSPGLAG*RWYWEG Trigger: GCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGG...ACTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | CTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGAGAGGGCTGGCTCGCTaGGGAAGTCCGAGAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LHLITDETVWTDVSLSHRRGLAR*GSPRGR Trigger: ACGACCTCTCGGACTTCCGCAGCGAGCCAGCCCTCT...CCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | GCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGGCTTGGGGGCGGGTaGAGAGAGGGTTCCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: ACPTGSSHLFILGVRFRSGLGGG*REGSFD Trigger: GTCAAAGGAACCCTCTCTCCACCCGCCCCCAAGCCC...AGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | CACTCTGGGACAAGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGCAGGCCCCGGGGGTaGACAGTGAAAGAGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HSGTRSAQASTSSQMRQYGRPRG*TVKELL Trigger: CAGCAACTCTTTCACTGTTCACCCCCGGGGCCTGCC...ATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCTTGTCCCAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | AGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGAGACCCACTGGCGCTaGCTGGGAGTGGCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSAQASTSSQMRQYGQMSETHWR*LGVALA Trigger: AGCCAGTGCCACTCCCAGTCAGCGCCAGTGGGTCTC...TGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | AGCCAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTAGGCACACCAACTGCTaGGGAGGGCAGTTTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SQVEGHRIQSGLLGIDWLRHTNC*GGQFGF Trigger: GAAGCCAAACTGCCCTCCTCAGCAGTTGGTGTGCCT...AAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGCTCCGCCTCTTCCTGTaGCAGAGAGCTCTCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TDVSLSHRQFPPVHPWCELRLFL*QRALRR Trigger: CCTTCTGAGAGCTCTCTGGCACAGGAAGAGGCGGAG...CTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGGCCCACCTCCCCCTTTaGCTCCTCAAATTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSHRQFPPVHPWCEIQIWAHLPL*LLKLPP Trigger: GGGAGGCAATTTGAGGAGCCAAAGGGGGAGGTGGGC...CCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGAGGTGTGTCCAGGCCTaGCAGGGTGCAGGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: HLITDETVWTDVSLSHRQRCVQA*QGAGGT Trigger: AGTACCACCTGCACCCTGCCAGGCCTGGACACACCT...CTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | TATGGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTTCCGAGAGGTCGTTCTaGCTGGCAGGTGTGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: YGQMSACPTGSSHLFILGSERSF*LAGVSM Trigger: CATGCTCACACCTGCCAGTCAGAACGACCTCTCGGA...ACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTTCTCAGGTCCCACACTaGTTACAAATGTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SQVEGHRIQSGLLGIDWLSQVPH*LQMWPG Trigger: CCCGGGCCACATTTGTAAGCAGTGTGGGACCTGAGA...AAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGACGCATGAACGGGTTCTaGCTTAGTGGACCCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: QMSACPTGSSHLFILGVRRMNGF*LSGPRL Trigger: GAGTCTGGGTCCACTAAGCCAGAACCCGTTCATGCG...TCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | ACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGTACTGTAGACACCAGCTaGGATCCGAGCCCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSSQMRQYGQMSACPTGSTVDTS*DPSPWL Trigger: GAGCCAGGGGCTCGGATCCCAGCTGGTGTCTACAGT...ACTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGTGGAGGTGGCGAGGCTaGTCTCTGCCACCTAACACA | + |
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Preference number: 4 (lower is better) Translates to: LHLITDETVWTDVSLSHRWRWRG*SLPPNT Trigger: TGTGTTAGGTGGCAGAGACCAGCCTCGCCACCTCCA...CCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGCCCGGGGGTGAACAGTaGAAGAGTTGCTGCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRPGGEQ*KSCCRS Trigger: AGACCGGCAGCAACTCTTTCACTGTTCACCCCCGGG...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | CAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTAGTTCCCAGGGGCTTTaGGCTTGGGGATCAACACGA | + |
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Preference number: 4 (lower is better) Translates to: QYGQMSACPTGSSHLFILSSQGL*AWGSTR Trigger: TCGTGTTGATCCCCAAGCGCAAAGCCCCTGGGAACT...AAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | AAGGTAGGAGCTGAAATTTCCGACAGCACTCTGGGACAAGATCTGCTCAGGCCTTGGACAGACCTGAGCTaGTCTCAGGTCCCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: KVGAEISDSTLGQDLLRPWTDLS*SQVPHC Trigger: GCAGTGTGGGACCTGAGAGCAGCTCAGGTCTGTCCA...AGGCCTGAGCAGATCTTGTCCCAGAGTGCTGTCGGAAATTTCAGCTCCTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGGCTCCTGGCCATTCTTaGCCAAGCCAGGAACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRAPGHS*PSQEPP Trigger: TGGGGGTTCCTGGCTTGGCCAAGAATGGCCAGGAGC...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | TCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCCTCCTGAAGGGTCCCTaGCTTTCTCTTGGGCACTAC | + |
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Preference number: 4 (lower is better) Translates to: STSSQMRQYGQMSACPTGLLKGP*LSLGHY Trigger: GTAGTGCCCAAGAGAAAGCCAGGGACCCTTCAGGAG...GCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGTTCTCCAGGGTAGTATaGGGTCCTGAGAGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: TDVSLSHRQFPPVHPWCEFSRVV*GPERLS Trigger: TGAGAGCCTCTCAGGACCCCATACTACCCTGGAGAA...CTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTTCAGAAATAGAGGGCTaGCTCGCTGCGGAAGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: QYGQMSACPTGSSHLFILSEIEG*LAAEVR Trigger: TCGGACTTCCGCAGCGAGCCAGCCCTCTATTTCTGA...AAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | TCTGGGACAAGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGACTTAAGTGTGGCTCCTaGAGGGTCCCTGGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGTRSAQASTSSQMRQYGLKCGS*RVPGFL Trigger: GAGAAAGCCAGGGACCCTTCAGGAGCCACACTTAAG...TCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCTTGTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGAGCATCCTGTTCCTCTaGCCCTTGCTGGGACTGACC | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRSILFL*PLLGLT Trigger: GGTCAGTCCCAGCAAGGGGCAGAGGAACAGGATGCT...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGGCTCAGCTTCAGCTGTaGCTGGTAGAAATGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSHRQFPPVHPWCEIQIWAQLQL*LVEMEV Trigger: CACCTCCATTTCTACCAGCCACAGCTGAAGCTGAGC...CCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGGCTTTGGAGTGTAGCTaGACAGACCTGAGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSHRQFPPVHPWCEIQIWALECS*TDLSCS Trigger: AGAGCAGCTCAGGTCTGTCCAGCTACACTCCAAAGC...CCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | AAGGTAGGAGCTGAAATTTCCGACAGCACTCTGGGACAAGATCTGCTCAGGCCTGAGAGAGGGTTCCTTTaGCTCCACCTTTGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVGAEISDSTLGQDLLRPERGFL*LHLWLP Trigger: TGGAAGCCAAAGGTGGAGTCAAAGGAACCCTCTCTC...AGGCCTGAGCAGATCTTGTCCCAGAGTGCTGTCGGAAATTTCAGCTCCTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | CTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCTGAAGGTCCCCGATTaGGATAGTTTCCATGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHLITDETVWTDVSLSHRLKVPD*DSFHVW Trigger: CCAGACATGGAAACTATCCCAATCGGGGACCTTCAG...CCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGGTTCCTGCCACTTGCTaGAGGCCATGGAATGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRVPATC*RPWNAL Trigger: CAAAGCATTCCATGGCCTTCAGCAAGTGGCAGGAAC...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | CACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGCCCTAAAGGCAAAAGGAGGTTCCTAACTGCCCACTaGATCTCAGCAGCCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: HLFILGVRFRSGPKGKRRFLTAH*ISAAKG Trigger: TCCCTTGGCTGCTGAGATGCAGTGGGCAGTTAGGAA...CCTCCTTTTGCCTTTAGGGCCAGATCTGAATCTCACACCAAGGATGAACAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | TCTGGGACAAGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGACACTGCTTACAAATGTaGCCCGGGGCAAGAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SGTRSAQASTSSQMRQYGHCLQM*PGARKL Trigger: CAGTTTTCTTGCCCCGGGCCACATTTGTAAGCAGTG...TCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCTTGTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CCA 90 bp | AGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGGCCATGGAATGCTTTaGAGTGTAGCTGGACAGACC | + |
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Preference number: 4 (lower is better) Translates to: RSAQASTSSQMRQYGQMSGHGML*SVAGQT Trigger: GGTCTGTCCAGCTACACTCCAAAGCATTCCATGGCC...TGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR TCA 90 bp | CAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGCAGGCTCTTGTCATTaGAGGAGATCTTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QYGQMSACPTGSSHLFILAGSCH*RRSSSF Trigger: AAAAGATGAAGATCTCCTTCAATGACAAGAGCCTGC...AAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGTCCATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR GCA 90 bp | AGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCATACTCAAATGTTGTATaGAGGCTCTTGTCATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSAQASTSSQMRQYGQMSYSNVV*RLLSLK Trigger: CTTCAATGACAAGAGCCTGCATACAACATTTGAGTA...TGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | GGCCGGGCTGTGGCGCCTCGTACACTACTACCTCGGCAGCGCGGATaGCCGCAGCGGGCGGCACAGCGGGTGGGAAGCCTGGCGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GRAVAPRTLLPRQRG*PQRAAQRVGSLALT Trigger: AGTCAGCGCCAGGCTTCCCACCCGCTGTGCCGCCCGCTGCGGGCATCCGCGCTGCCGAGGTAGTAGTGTACGAGGCGCCACAGCCCGGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | TTGGTAGGAGTGCGCGTGGCAGCAGATGCAGACGCCACGGGAAGCTaGGGGAGCGCAGGGCGGAAGCGCTCTGGGCTCCCGCGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVGVRVAADADATGS*GSAGRKRSGLPRRQ Trigger: CTGCCGCCGCGGGAGCCCAGAGCGCTTCCGCCCTGCGCTCCCGCAGCTTCCCGTGGCGTCTGCATCTGCTGCCACGCGCACTCCTACCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | TGCAGACGCCACGGGAAGCTGCGGGAGCGCAGGGCGGAAGCGCTCTaGGCTCCCGCGGCGGCAGGGCGCAGCAGGCGAGTCGAACTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRRHGKLRERRAEAL*APAAAGRSRRVELF Trigger: GAAAAGTTCGACTCGCCTGCTGCGCCCTGCCGCCGCGGGAGCCCAGAGCGCTTCCGCCCTGCGCTCCCGCAGCTTCCCGTGGCGTCTGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | GCTGAGCGGGCCGCGTCCCGCGCCGCCGCTCCGACTCAAGTCGCATaGACGGGTTCTGGCTTAGTGGACCCAGACTCTCGGCCAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: AERAASRAAAPTQVA*TGSGLVDPDSRPAP Trigger: TGGTGCTGGCCGAGAGTCTGGGTCCACTAAGCCAGAACCCGTTCATGCGACTTGAGTCGGAGCGGCGGCGCGGGACGCGGCCCGCTCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | GCGGATGCCCGCAGCGGGCGGCACAGCGGGTGGGAAGCCTGGCGCTaGCTCGATGATGAGGATGTTGTCCGCTCGAATGGTCCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: ADARSGRHSGWEAWR*LDDEDVVRSNGPHA Trigger: GGCGTGCGGACCATTCGAGCGGACAACATCCTCATCATCGAGTCAGCGCCAGGCTTCCCACCCGCTGTGCCGCCCGCTGCGGGCATCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | GGCGGCAGGGCGCAGCAGGCGAGTCGAACTTTTCCAGCAGGCGGCTaGCACGGCCGGGCTGTGGCGCCTCGTACACTACTACCTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRAQQASRTFPAGG*HGRAVAPRTLLPRQ Trigger: CTGCCGAGGTAGTAGTGTACGAGGCGCCACAGCCCGGCCGTGTCAGCCGCCTGCTGGAAAAGTTCGACTCGCCTGCTGCGCCCTGCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | GGCAGGAGCCAACGACCGATTGGTAGGAGTGCGCGTGGCAGCAGATaGAGACGCCACGGGAAGCTGCGGGAGCGCAGGGCGGAAGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSQRPIGRSARGSR*RRHGKLRERRAEAL Trigger: GAGCGCTTCCGCCCTGCGCTCCCGCAGCTTCCCGTGGCGTCTGCATCTGCTGCCACGCGCACTCCTACCAATCGGTCGTTGGCTCCTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | CGCGTCCCGCGCCGCCGCTCCGACTCAAGTCGCATGAACGGGTTCTaGCTTAGTGGACCCAGACTCTCGGCCAGCACCAGCCGCTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RVPRRRSDSSRMNGF*LSGPRLSASTSRSL Trigger: TAACGAGCGGCTGGTGCTGGCCGAGAGTCTGGGTCCACTAAGCCAGAACCCGTTCATGCGACTTGAGTCGGAGCGGCGGCGCGGGACGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | GCACCATCCACTGTAGACACCAGCTGGGATCCGAGCCCCTGGCTCTaGGAGGCCCAGCCCACCTCCCCCTTTGGCTCCTCAAATTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSTVDTSWDPSPWL*EAQPTSPFGSSNCL Trigger: GAGGCAATTTGAGGAGCCAAAGGGGGAGGTGGGCTGGGCCTCTCAGAGCCAGGGGCTCGGATCCCAGCTGGTGTCTACAGTGGATGGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | CTACCTCGGTTCAGGAGTTCTGAGGTGTGTCCAGGCCTGGCAGGGTaGAGGTGGTACTGGGAAGGCACACCAACTGCTGAGGAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRFRSSEVCPGLAG*RWYWEGTPTAEEGS Trigger: ACTGCCCTCCTCAGCAGTTGGTGTGCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGGACACACCTCAGAACTCCTGAACCGAGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | GGCCCAACTGAAGTGGCACTTGGAGTCCCAGGGCTTGGGGGCGGGTaGAGAGAGGGTTCCTTTGACTCCACCTTTGGCTTCCACTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPTEVALGVPGLGGG*REGSFDSTFGFHFP Trigger: GGGAAAGTGGAAGCCAAAGGTGGAGTCAAAGGAACCCTCTCTCCACCCGCCCCCAAGCCCTGGGACTCCAAGTGCCACTTCAGTTGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | TCAGAAATTGCTGGCCTGGGGCAGGCCCCCTTCCTAACTGCCCACTaGATCTCAGCAGCCAAGGGACTCTTCTCTAGGGCAGGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SEIAGLGQAPFLTAH*ISAAKGLFSRAGAP Trigger: TGGTGCACCTGCCCTAGAGAAGAGTCCCTTGGCTGCTGAGATGCAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGAGGCTCCTGGCCATTCTaGGCCAAGCCAGGAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QMSACPTGSSHLFILGVRGSWPF*AKPGTP Trigger: GGGGGTTCCTGGCTTGGCCAAGAATGGCCAGGAGCC...TCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | CGAGGCTGGTCTCTGCCACCTAACACACTTGTCTGTGTCAGAAATTaGTGGCCTGGGGCAGGCCCCCTTCCTAACTGCCCACTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGWSLPPNTLVCVRN*WPGAGPLPNCPLHL Trigger: GAGATGCAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGACACAGACAAGTGTGTTAGGTGGCAGAGACCAGCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | GGCTGGTCTCTGCCACCTAACACACTTGTCTGTGTCAGAAATTGCTaGCCTGGGGCAGGCCCCCTTCCTAACTGCCCACTGCATCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWSLPPNTLVCVRNC*PGAGPLPNCPLHLS Trigger: GCTGAGATGCAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGACACAGACAAGTGTGTTAGGTGGCAGAGACCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | AAGTGTTGCTACCTCGGTTCAGGAGTTCTGAGGTGTGTCCAGGCCTaGCAGGGTGCAGGTGGTACTGGGAAGGCACACCAACTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KCCYLGSGVLRCVQA*QGAGGTGKAHQLLR Trigger: CCTCAGCAGTTGGTGTGCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGGACACACCTCAGAACTCCTGAACCGAGGTAGCAACACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | TGCACAGTGGGGTATCGTTTCTTTAGGGTGTTCTCCAGGGTAGTATaGGGTCCTGAGAGGCTCTCAGCATCCTGTTCCTCTGCCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CTVGYRFFRVFSRVV*GPERLSASCSSAPC Trigger: GCAAGGGGCAGAGGAACAGGATGCTGAGAGCCTCTCAGGACCCCATACTACCCTGGAGAACACCCTAAAGAAACGATACCCCACTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCAGCTGTTCCTCTGCCCCTaGCTGGGACTGACCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLITDETVWTDVSLSHRQLFLCP*LGLTIG Trigger: ACCAATGGTCAGTCCCAGCAAGGGGCAGAGGAACAG...CTGCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | AGTGTGGCTCCTGAAGGGTCCCTGGCTTTCTCTTGGGCACTACTGTaGAAGTGTTGCTACCTCGGTTCAGGAGTTCTGAGGTGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVAPEGSLAFSWALL*KCCYLGSGVLRCVQ Trigger: CTGGACACACCTCAGAACTCCTGAACCGAGGTAGCAACACTTTCACAGTAGTGCCCAAGAGAAAGCCAGGGACCCTTCAGGAGCCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | CCACATCAGTTGGAGTCTGCACCAGTGTCTGTTCCTGCCACTTGCTaGAGGCCATGGAATGCTTTGGAGTGTAGCTGGACAGACCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHQLESAPVSVPATC*RPWNALECSWTDLS Trigger: GCTCAGGTCTGTCCAGCTACACTCCAAAGCATTCCATGGCCTTCAGCAAGTGGCAGGAACAGACACTGGTGCAGACTCCAACTGATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 90 bp | ATCTTCCTCTCCTTCCTCCTCCTCCTCCTCCTCCGCCTCTTCCTGTaGCAGAGAGCTCTCAGAAGGGTACTCAAATGTTGTATGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLSFLLLLLLRLFL*QRALRRVLKCCMQA Trigger: AGCCTGCATACAACATTTGAGTACCCTTCTGAGAGCTCTCTGGCACAGGAAGAGGCGGAGGAGGAGGAGGAGGAGGAAGGAGAGGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 90 bp | CAGGGCCCTGGCCTGAAGGTCCCCGATTGGGATAGTTTCCATGTCTaGCTTGGAGGATGGCCTTATTTCAAAGGAATCATTGGCGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGPGLKVPDWDSFHV*LGGWPYFKGIIGAG Trigger: ACCAGCGCCAATGATTCCTTTGAAATAAGGCCATCCTCCAAGCCAGACATGGAAACTATCCCAATCGGGGACCTTCAGGCCAGGGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | ACAGATGTCAGCCTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGCCTTTGACTCCACCTTaGGCTTCCACTTTCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TDVSLSHRQFPPVHPWCEPLTPP*ASTFPV Trigger: TACCGGGAAAGTGGAAGCCAAAGGTGGAGTCAAAGG...CTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAGGCTGACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CTGTCCCACAGGCAGTTCCCACCTGTTCATCCTTGGTGTGAGATTCAGATCTGGGGAGAGAGGGTTCCTTaGACTCCACCTTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHRQFPPVHPWCEIQIWGERVP*TPPLAS Trigger: GGAAGCCAAAGGTGGAGTCAAAGGAACCCTCTCTCC...CCAGATCTGAATCTCACACCAAGGATGAACAGGTGGGAACTGCCTGTGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | AGCCAGGTAGAGGGGCACAGAATACAGTCAGGGCTCCTGGGTATTGACTGGCTTAGGCCATGGAATGCTTaGGAGTGTAGCTGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQVEGHRIQSGLLGIDWLRPWNA*ECSWTD Trigger: GTCTGTCCAGCTACACTCCAAAGCATTCCATGGCCT...AAGCCAGTCAATACCCAGGAGCCCTGACTGTATTCTGTGCCCCTCTACCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | TCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGCGTCCCTGGCTTTCTCTaGGGCACTACTGTGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: STSSQMRQYGQMSACPTGVPGFL*GTTVKV Trigger: CACTTTCACAGTAGTGCCCAAGAGAAAGCCAGGGAC...GCCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CACTCTGGGACAAGATCTGCTCAGGCCTCCACCTCATCACAGATGAGACAGTATCTTTGGCTCCTCAAATaGCCTCCCCGCCAAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HSGTRSAQASTSSQMRQYLWLLK*PPRQRI Trigger: TATCCTTTGGCGGGGAGGCAATTTGAGGAGCCAAAG...ATACTGTCTCATCTGTGATGAGGTGGAGGCCTGAGCAGATCTTGTCCCAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 90 bp | TACTGGGAAGGCACACCAACTGCTGAGGAGGGCAGTTTGGCTTCTTaGAAGGCCTCCTCCTCTGAGTCTACTTCATCAATGAAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: YWEGTPTAEEGSLAS*KASSSESTSSMKVT Trigger: AGTCACCTTCATTGATGAAGTAGACTCAGAGGAGGAGGCCTTTCAAGAAGCCAAACTGCCCTCCTCAGCAGTTGGTGTGCCTTCCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CTCGCAGTGGCCACTCCTCAAAAGGTAGGAGCTGAAATTTCCGACAGCACTCTGTGCAGGCTCTTGTCATaGAAGGAGATCTTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVATPQKVGAEISDSTLCRLLS*KEIFIF Trigger: AAAGATGAAGATCTCCTTCAATGACAAGAGCCTGCA...CAGAGTGCTGTCGGAAATTTCAGCTCCTACCTTTTGAGGAGTGGCCACTGCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | CTCCACCTCATCACAGATGAGACAGTATGGACAGATGTCAGCCTGTCCCACAGGAAGGGTACTCAAATGTaGTATGCAGGCTCTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LHLITDETVWTDVSLSHRKGTQM*YAGSCH Trigger: ATGACAAGAGCCTGCATACAACATTTGAGTACCCTT...CCTGTGGGACAGGCTGACATCTGTCCATACTGTCTCATCTGTGATGAGGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS-3UTR CAA 90 bp | ACTCCTCAAAAGGTAGGAGCTGAAATTTCCGACAGCACTCTGGGACAAGATCTGGTTGTATGCAGGCTCTaGTCATTGAAGGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPQKVGAEISDSTLGQDLVVCRL*SLKEIF Trigger: GAAGATCTCCTTCAATGACAAGAGCCTGCATACAAC...CAGATCTTGTCCCAGAGTGCTGTCGGAAATTTCAGCTCCTACCTTTTGAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | CACGGGAAGCTGCGGGAGCGCAGGGCGGAAGCGCTCTaGGCTCCCGCGGCGGCAGGGCGCAGCAGGCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGKLRERRAEAL*APAAAGRSRRV Trigger: GACTCGCCTGCTGCGCCCTGCCGCCGCGGGAGCCCAGAGCGCTTCCGCCCTGCGCTCCCGCAGCTTCCCGTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | GCCGCGTCCCGCGCCGCCGCTCCGACTCAAGTCGCATaGACGGGTTCTGGCTTAGTGGACCCAGACTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AASRAAAPTQVA*TGSGLVDPDSR Trigger: CCGAGAGTCTGGGTCCACTAAGCCAGAACCCGTTCATGCGACTTGAGTCGGAGCGGCGGCGCGGGACGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | CAACGACCGATTGGTAGGAGTGCGCGTGGCAGCAGATaGAGACGCCACGGGAAGCTGCGGGAGCGCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QRPIGRSARGSR*RRHGKLRERRA Trigger: CGCCCTGCGCTCCCGCAGCTTCCCGTGGCGTCTGCATCTGCTGCCACGCGCACTCCTACCAATCGGTCGTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 90 bp | GGCACAGCGGGTGGGAAGCCTGGCGCTGACTCGATGATGAGGATGTaGTCCGCTCGAATGGTCCGCACGCCGGGCACGCGACAGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTAGGKPGADSMMRM*SARMVRTPGTRQYS Trigger: GCTGTACTGTCGCGTGCCCGGCGTGCGGACCATTCGAGCGGACAACATCCTCATCATCGAGTCAGCGCCAGGCTTCCCACCCGCTGTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | CGCAGCGGGCGGCACAGCGGGTGGGAAGCCTGGCGCTaGCTCGATGATGAGGATGTTGTCCGCTCGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSGRHSGWEAWR*LDDEDVVRSNG Trigger: ACCATTCGAGCGGACAACATCCTCATCATCGAGTCAGCGCCAGGCTTCCCACCCGCTGTGCCGCCCGCTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | GCGCAGCAGGCGAGTCGAACTTTTCCAGCAGGCGGCTaGCACGGCCGGGCTGTGGCGCCTCGTACACTACTA | + |
|
Preference number: 6 (lower is better) Translates to: AQQASRTFPAGG*HGRAVAPRTLL Trigger: TAGTAGTGTACGAGGCGCCACAGCCCGGCCGTGTCAGCCGCCTGCTGGAAAAGTTCGACTCGCCTGCTGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | CGCCGCCGCTCCGACTCAAGTCGCATGAACGGGTTCTaGCTTAGTGGACCCAGACTCTCGGCCAGCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSDSSRMNGF*LSGPRLSASTS Trigger: GCTGGTGCTGGCCGAGAGTCTGGGTCCACTAAGCCAGAACCCGTTCATGCGACTTGAGTCGGAGCGGCGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 72 bp | GGTGGGAAGCCTGGCGCTGACTCGATGATGAGGATGTaGTCCGCTCGAATGGTCCGCACGCCGGGCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GGKPGADSMMRM*SARMVRTPGTR Trigger: TCGCGTGCCCGGCGTGCGGACCATTCGAGCGGACAACATCCTCATCATCGAGTCAGCGCCAGGCTTCCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | GCTGGCCTGGGGCAGGCCCCCTTCCTAACTGCCCACTaGATCTCAGCAGCCAAGGGACTCTTCTCTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGLGQAPFLTAH*ISAAKGLFSRA Trigger: TGCCCTAGAGAAGAGTCCCTTGGCTGCTGAGATGCAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | GAGGTGTGTCCAGGCCTGGCAGGGTGCAGGTGGTACTaGGAAGGCACACCAACTGCTGAGGAGGGCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EVCPGLAGCRWY*EGTPTAEEGSL Trigger: CAAACTGCCCTCCTCAGCAGTTGGTGTGCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGGACACACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 72 bp | GGGGCGGGTGGAGAGAGGGTTCCTTTGACTCCACCTTaGGCTTCCACTTTCCCGGTACAGGCGGAGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGGERVPLTPP*ASTFPVQAESL Trigger: CAGGCTCTCCGCCTGTACCGGGAAAGTGGAAGCCAAAGGTGGAGTCAAAGGAACCCTCTCTCCACCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 90 bp | CAGGGCTTGGGGGCGGGTGGAGAGAGGGTTCCTTTGACTCCACCTTaGGCTTCCACTTTCCCGGTACAGGCGGAGAGCCTGACAACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGLGAGGERVPLTPP*ASTFPVQAESLTTH Trigger: ATGGGTTGTCAGGCTCTCCGCCTGTACCGGGAAAGTGGAAGCCAAAGGTGGAGTCAAAGGAACCCTCTCTCCACCCGCCCCCAAGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | CTTTGGCTTCCACTTTCCCGGTACAGGCGGAGAGCCTaGCAACCCATTGGCAGGGCCGGTAGGGGATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LWLPLSRYRRRA*QPIGRAGRGFL Trigger: CAGGAATCCCCTACCGGCCCTGCCAATGGGTTGTCAGGCTCTCCGCCTGTACCGGGAAAGTGGAAGCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | GAGGTTGGCCAGGGCCCTGGCCTGAAGGTCCCCGATTaGGATAGTTTCCATGTCTGGCTTGGAGGATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EVGQGPGLKVPD*DSFHVWLGGWP Trigger: AGGCCATCCTCCAAGCCAGACATGGAAACTATCCCAATCGGGGACCTTCAGGCCAGGGCCCTGGCCAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | GAACCCCCAAGCCTTCAGCCGGCTCAGCTTCAGCTGTaGCTGGTAGAAATGGAGGTGGCGAGGCTGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EPPSLQPAQLQL*LVEMEVARLVS Trigger: AGAGACCAGCCTCGCCACCTCCATTTCTACCAGCCACAGCTGAAGCTGAGCCGGCTGAAGGCTTGGGGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 90 bp | ATGAAGGTGACTGGAAGTCCTGGCCTCACAGGCTCCTGGCCATTCTaGGCCAAGCCAGGAACCCCCAAGCCTTCAGCCGGCTCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MKVTGSPGLTGSWPF*AKPGTPKPSAGSAS Trigger: TGAAGCTGAGCCGGCTGAAGGCTTGGGGGTTCCTGGCTTGGCCAAGAATGGCCAGGAGCCTGTGAGGCCAGGACTTCCAGTCACCTTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | AGAAATTGCTGGCCTGGGGCAGGCCCCCTTCCTAACTaGCCACTGCATCTCAGCAGCCAAGGGACTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RNCWPGAGPLPN*PLHLSSQGTLL Trigger: GAGAAGAGTCCCTTGGCTGCTGAGATGCAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | TTCAGGAGTTCTGAGGTGTGTCCAGGCCTGGCAGGGTaGAGGTGGTACTGGGAAGGCACACCAACTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FRSSEVCPGLAG*RWYWEGTPTAE Trigger: CTCAGCAGTTGGTGTGCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGGACACACCTCAGAACTCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | TACCTCGGTTCAGGAGTTCTGAGGTGTGTCCAGGCCTaGCAGGGTGCAGGTGGTACTGGGAAGGCACACCAA | + |
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Preference number: 6 (lower is better) Translates to: YLGSGVLRCVQA*QGAGGTGKAHQ Trigger: TTGGTGTGCCTTCCCAGTACCACCTGCACCCTGCCAGGCCTGGACACACCTCAGAACTCCTGAACCGAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 90 bp | GGTAGAAATGGAGGTGGCGAGGCTGGTCTCTGCCACCTAACACACTaGTCTGTGTCAGAAATTGCTGGCCTGGGGCAGGCCCCCTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: GRNGGGEAGLCHLTH*SVSEIAGLGQAPFL Trigger: TAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGACACAGACAAGTGTGTTAGGTGGCAGAGACCAGCCTCGCCACCTCCATTTCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | CTGCCACCTAACACACTTGTCTGTGTCAGAAATTGCTaGCCTGGGGCAGGCCCCCTTCCTAACTGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LPPNTLVCVRNC*PGAGPLPNCPL Trigger: CAGTGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGACACAGACAAGTGTGTTAGGTGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | TCTCTGCCACCTAACACACTTGTCTGTGTCAGAAATTaGTGGCCTGGGGCAGGCCCCCTTCCTAACTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLPPNTLVCVRN*WPGAGPLPNCP Trigger: TGGGCAGTTAGGAAGGGGGCCTGCCCCAGGCCAGCAATTTCTGACACAGACAAGTGTGTTAGGTGGCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | AGGATGGCCTTATTTCAAAGGAATCATTGGCGCTGGTaGCAGAGGAGACCCACTGGCGCTGACTGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RMALFQRNHWRW*QRRPTGADWEW Trigger: CCACTCCCAGTCAGCGCCAGTGGGTCTCCTCTGCCACCAGCGCCAATGATTCCTTTGAAATAAGGCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | CATCCTGTTCCTCTGCCCCTTGCTGGGACTGACCATTaGTCTGACTTAAGTGTGGCTCCTGAAGGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPVPLPLAGTDH*SDLSVAPEGSL Trigger: CAGGGACCCTTCAGGAGCCACACTTAAGTCAGACCAATGGTCAGTCCCAGCAAGGGGCAGAGGAACAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | TCCTTCCTCCTCCTCCTCCTCCTCCGCCTCTTCCTGTaGCAGAGAGCTCTCAGAAGGGTACTCAAATGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SFLLLLLLRLFL*QRALRRVLKCC Trigger: ACAACATTTGAGTACCCTTCTGAGAGCTCTCTGGCACAGGAAGAGGCGGAGGAGGAGGAGGAGGAGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS GCA 72 bp | TGGAATGCTTTGGAGTGTAGCTGGACAGACCTGAGCTaGTCTCAGGTCCCACACTGCTTACAAATGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WNALECSWTDLS*SQVPHCLQMWP Trigger: GGGCCACATTTGTAAGCAGTGTGGGACCTGAGAGCAGCTCAGGTCTGTCCAGCTACACTCCAAAGCATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | GGCACACCAACTGCTGAGGAGGGCAGTTTGGCTTCTTaGAAGGCCTCCTCCTCTGAGTCTACTTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: GTPTAEEGSLAS*KASSSESTSSM Trigger: CATTGATGAAGTAGACTCAGAGGAGGAGGCCTTTCAAGAAGCCAAACTGCCCTCCTCAGCAGTTGGTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | GGCCATGGAATGCTTTGGAGTGTAGCTGGACAGACCTaGGCTGCTCTCAGGTCCCACACTGCTTACAAATGT | + |
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Preference number: 6 (lower is better) Translates to: GHGMLWSVAGQT*AALRSHTAYKC Trigger: ACATTTGTAAGCAGTGTGGGACCTGAGAGCAGCTCAGGTCTGTCCAGCTACACTCCAAAGCATTCCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | GGGTATCGTTTCTTTAGGGTGTTCTCCAGGGTAGTATaGGGTCCTGAGAGGCTCTCAGCATCCTGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GYRFFRVFSRVV*GPERLSASCSS Trigger: AGAGGAACAGGATGCTGAGAGCCTCTCAGGACCCCATACTACCCTGGAGAACACCCTAAAGAAACGATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CAA 72 bp | GTCCCTGGCTTTCTCTTGGGCACTACTGTGAAAGTGTaGCTACCTCGGTTCAGGAGTTCTGAGGTGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VPGFLLGTTVKV*LPRFRSSEVCP Trigger: TGGACACACCTCAGAACTCCTGAACCGAGGTAGCAACACTTTCACAGTAGTGCCCAAGAGAAAGCCAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS TCA 72 bp | GGAGGGCAGTTTGGCTTCTTGAAAGGCCTCCTCCTCTaGGTCTACTTCATCAATGAAGGTGACTGGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GGQFGFLKGLLL*VYFINEGDWKS Trigger: GGACTTCCAGTCACCTTCATTGATGAAGTAGACTCAGAGGAGGAGGCCTTTCAAGAAGCCAAACTGCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | CCCGATTGGGATAGTTTCCATGTCTGGCTTGGAGGATaGCCTTATTTCAAAGGAATCATTGGCGCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PDWDSFHVWLGG*PYFKGIIGAGG Trigger: GCCACCAGCGCCAATGATTCCTTTGAAATAAGGCCATCCTCCAAGCCAGACATGGAAACTATCCCAATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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| CDS CCA 72 bp | GGCCTGAAGGTCCCCGATTGGGATAGTTTCCATGTCTaGCTTGGAGGATGGCCTTATTTCAAAGGAATCATT | + |
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Preference number: 6 (lower is better) Translates to: GLKVPDWDSFHV*LGGWPYFKGII Trigger: AATGATTCCTTTGAAATAAGGCCATCCTCCAAGCCAGACATGGAAACTATCCCAATCGGGGACCTTCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114336.4 |
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