Pregenerated sensors for TPRKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054226Ensembl transcript IDs: ENSMUST00000067137.14, ENSMUST00000089570.7, ENSMUST00000113751.8, ENSMUST00000113752.8, ENSMUST00000113753.8, ENSMUST00000149026.5, ENSMUST00000200680.4, ENSMUST00000201939.4, ENSMUST00000202803.4
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGAAGACATTGGATTCCCGGGAAGTGGAGGCAGAGATGGCTATaGGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTGGGGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: RRRHWIPGKWRQRWL*ACQESAPARHLGRT Trigger: TGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGCCTCCACTTCCCGGGAATCCAATGTCTTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR GCA 90 bp | GAAGTGGAGGCAGAGATGGCTATGAGCCTGCCAGGAATCAGCCCCTaGCCGGCACTTGGGGAGGACAGCAAGTGCTCTCAACTGATGAGT | + |
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Preference number: 1 (lower is better) Translates to: EVEAEMAMSLPGISP*PALGEDSKCSQLMS Trigger: ACTCATCAGTTGAGAGCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGCCTCCACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR GCA 90 bp | CTAGAAGCCCAGGCTGAGAAGCCCCCGCAGAGGGCTCTAAAGCCCTaGTGTGGGTTTCCCTCTGATCCCTTCTGCCTTCAAGATAACAAA | + |
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Preference number: 1 (lower is better) Translates to: LEAQAEKPPQRALKP*CGFPSDPFCLQDNK Trigger: TTTGTTATCTTGAAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAGAGCCCTCTGCGGGGGCTTCTCAGCCTGGGCTTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR TCA 90 bp | GGGTGTTTTGCCTGTAGTATGTATACTACATGTGTGCAGTTCCCATaGCGGCCAGAAGAAGACATTGGATTCCCGGGAAGTGGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GCFACSMYTTCVQFP*RPEEDIGFPGSGGR Trigger: TCTGCCTCCACTTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACATGTAGTATACATACTACAGGCAAAACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR GCA 90 bp | AGGAGGGAGGGTCTCTTAAAGCCCATGCCCACAATGACACATTTCTaGCAAGGTCTTACCAACTCCAAAAAGGCCTCATCTCTAAATAGT | + |
|
Preference number: 1 (lower is better) Translates to: RREGLLKPMPTMTHF*QGLTNSKKASSLNS Trigger: ACTATTTAGAGATGAGGCCTTTTTGGAGTTGGTAAGACCTTGGCAGAAATGTGTCATTGTGGGCATGGGCTTTAAGAGACCCTCCCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR GCA 90 bp | TTTACTGGTATGGGTGTTTTGCCTGTAGTATGTATACTACATGTGTaGAGTTCCCATGACGGCCAGAAGAAGACATTGGATTCCCGGGAA | + |
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Preference number: 1 (lower is better) Translates to: FTGMGVLPVVCILHV*SSHDGQKKTLDSRE Trigger: TTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACATGTAGTATACATACTACAGGCAAAACACCCATACCAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR CCA 90 bp | CTGTCTCCAGGAGACATTAAAAGTGCAGATGATACTAGCCCCACTTaGTTAAACTTTGATCAAGAAACCAACTCCACAGCTGTCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LSPGDIKSADDTSPT*LNFDQETNSTAVCS Trigger: ACTGCAGACAGCTGTGGAGTTGGTTTCTTGATCAAAGTTTAACCAAGTGGGGCTAGTATCATCTGCACTTTTAATGTCTCCTGGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCCACACGGCTAGAAGGAGGGAGGGTCTCTTAAAGCCCATGCCCACAATGCTGGAGGGGCAGAACTaGCTGTGCTTGTGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSHTARRREGLLKPMPTMLEGQN*LCLWEE Trigger: TTCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAG...CATTGTGGGCATGGGCTTTAAGAGACCCTCCCTCCTTCTAGCCGTGTGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCAGAGGGCTCTAAAGCCCTGCTGTGGGTTTCCCTCTGATCCCTTCTGCCTTTCCAGGGCTGCCCACTaGTTGTTCAAGTCAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PQRALKPCCGFPSDPFCLSRAAH*LFKSRL Trigger: GAGCCTTGACTTGAACAAGCAGTGGGCAGCCCTGGA...AAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAGAGCCCTCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCCACACGGCTAGAAGGAGGGAGGGTCTCTTAAAGCCCATGCCCACAATGCTGTGGGTTTCCCTCTaGTCCCTTCTGCCTTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSHTARRREGLLKPMPTMLWVSL*SLLPSR Trigger: TCTTGAAGGCAGAAGGGATCAGAGGGAAACCCACAG...CATTGTGGGCATGGGCTTTAAGAGACCCTCCCTCCTTCTAGCCGTGTGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTGTGGGAAGATCCAGGGCTGCCCACTaGTTGTTCAAGTCAAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGALEGTGGAELTVLVGRSRAAH*LFKSRL Trigger: GAGCCTTGACTTGAACAAGCAGTGGGCAGCCCTGGA...TCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCCCTGCCTCAGCCTCCTaGGCAGTGGACTGTAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGPASAS*AVDCNE Trigger: CTCATTACAGTCCACTGCTCAGGAGGCTGAGGCAGG...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCAGACTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTCTGGGATTAAAGGCATaGATCACCACGCCCGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LCRLGALEGTGGAELTVLLGLKA*ITTPGF Trigger: AAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAG...AAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAGTCTGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGAGGGCTCTAAAGCCCTGCTGTGGGTTTCCCTCTGATCCCTTCTGCCTTTGTACCTGTCCTCTGTaGCTGCTTTCAGACTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PQRALKPCCGFPSDPFCLCTCPL*LLSDCK Trigger: TTTGCAGTCTGAAAGCAGCCACAGAGGACAGGTACA...AAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAGAGCCCTCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCCACACGGCTAGAAGGAGGGAGGGTCTCTTAAAGCCCATGCCCACAATGTGTACCTGTCCTCTGTaGCTGCTTTCAGACTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSHTARRREGLLKPMPTMCTCPL*LLSDCK Trigger: TTTGCAGTCTGAAAGCAGCCACAGAGGACAGGTACA...CATTGTGGGCATGGGCTTTAAGAGACCCTCCCTCCTTCTAGCCGTGTGGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTGTGGGAAGAGCTGTACTAAGCCAGTaGGCTTTAGGGTTTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LGALEGTGGAELTVLVGRAVLSQ*ALGFDC Trigger: ACAGTCAAACCCTAAAGCTCACTGGCTTAGTACAGC...TCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCTCTCAACTCCAGGGCTaGCCACTGCTTGTTCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: QRTTPELHYESTWLCRLGSQLQG*PLLVQV Trigger: GACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGA...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR CAA 90 bp | TGTATACTACATGTGTGCAGTTCCCATGACGGCCAGAAGAAGACATaGGATTCCCGGGAAGTGGAGGCAGAGATGGCTATGAGCCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CILHVCSSHDGQKKT*DSREVEAEMAMSLP Trigger: TGGCAGGCTCATAGCCATCTCTGCCTCCACTTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACATGTAGTATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATTGAGTAATTGTAGCCCTGCCTCAGCCTCCTaGGCAGTGGACTGTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: PVLCGCFQTAKVILSNCSPASAS*AVDCNE Trigger: CTCATTACAGTCCACTGCTCAGGAGGCTGAGGCAGG...GCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCGTGAATGAAAAGAGGTaGGCAATACCTGCCACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QRTTPELHYESTWLCRLGVNEKR*AIPATS Trigger: GGAAGTGGCAGGTATTGCTCACCTCTTTTCATTCAC...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCGAGGTGAGCAATACCTaGCACTTCCATGTGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGEVSNT*HFHVDA Trigger: AGCATCCACATGGAAGTGGCAGGTATTGCTCACCTC...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGACAAGCTGCACAGTAACCTAGAAGCCCAGGCTGAGAAGCCCCCGCAGAGGGCCTCTTGTATAAAGTaGGCACAAAGACATATCTAC | + |
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Preference number: 2 (lower is better) Translates to: SDKLHSNLEAQAEKPPQRASCIK*AQRHIY Trigger: GTAGATATGTCTTTGTGCCCACTTTATACAAGAGGC...CCTCTGCGGGGGCTTCTCAGCCTGGGCTTCTAGGTTACTGTGCAGCTTGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCTGGAGGGGCAGAACTaGCTGTGCTTGTGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LQVQRFSLLSSRQEHGSVLEGQN*LCLWEE Trigger: TTCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAG...GACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCCCCTCTGATCCCTTCTaGCTTCAAGATAACAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QRTTPELHYESTWLCRLGPSDPF*LQDNKM Trigger: CATTTTGTTATCTTGAAGGCAGAAGGGATCAGAGGG...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCAATAGTGCCACTCCCTaGGCCAAACATATTCAAACC | + |
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Preference number: 2 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGNSATP*AKHIQT Trigger: GGTTTGAATATGTTTGGCCCAGGGAGTGGCACTATT...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCTGGAGTCTACAGTCTCAACTCCAGGGCTGCCCACTGCTTGTTCAAGTCACTGCAAAGGTCATATTaGGTAATTGTAGCAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: NSGVYSLNSRAAHCLFKSLQRSY*VIVAGT Trigger: GGTTCCTGCTACAATTACTCAATATGACCTTTGCAG...TGACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGACTGTAGACTCCAGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCTTCTACATCTTCATCTaGAGGCCGCTAAGAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGFYIFI*RPLREN Trigger: GTTTTCTCTTAGCGGCCTTCAGATGAAGATGTAGAA...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAGGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCGAGGTGAGCAATACCTaGCACTTCCATGTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: LQVQRFSLLSSRQEHGSVEVSNT*HFHVDA Trigger: AGCATCCACATGGAAGTGGCAGGTATTGCTCACCTC...GACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACCTGTAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCCATAGTACTTTAGGCTaGTCTGGAATTTGTGGCATA | + |
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Preference number: 2 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGHSTLG*SGICGI Trigger: TATGCCACAAATTCCAGATCAGCCTAAAGTACTATG...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCGTGAGCTTTAGGGTTTaGCTGTCACTATGTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LQVQRFSLLSSRQEHGSVVSFRV*LSLCPS Trigger: GCTAGGACATAGTGACAGTCAAACCCTAAAGCTCAC...GACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCCTTCTGCCTTCAAGATAACAAAATGTTTCCTTCTGCTGTACTAAGCCAGTCTCAACTCCAGGGCTaGCCACTGCTTGTTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: DPFCLQDNKMFPSAVLSQSQLQG*PLLVQV Trigger: GACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGA...CTGGCTTAGTACAGCAGAAGGAAACATTTTGTTATCTTGAAGGCAGAAGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATTGAGTAATTGTAGCCATAGTACTTTAGGCTaGTCTGGAATTTGTGGCATA | + |
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Preference number: 2 (lower is better) Translates to: PVLCGCFQTAKVILSNCSHSTLG*SGICGI Trigger: TATGCCACAAATTCCAGATCAGCCTAAAGTACTATG...GCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATTGAGTAATTGTAGCGCCTCTTGTATAAAGTaGGCACAAAGACATATCTAC | + |
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Preference number: 2 (lower is better) Translates to: PVLCGCFQTAKVILSNCSASCIK*AQRHIY Trigger: GTAGATATGTCTTTGTGCCCACTTTATACAAGAGGC...GCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCCATGCCCACAATGACACATTTCTGCCAAGGTCTTACCAACTCCAAAAATTGAACTTGTGTGAATaGAAAGAGGTGAGCAATACC | + |
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Preference number: 2 (lower is better) Translates to: KAHAHNDTFLPRSYQLQKLNLCE*KEVSNT Trigger: GGTATTGCTCACCTCTTTTCATTCACACAAGTTCAA...TTTTTGGAGTTGGTAAGACCTTGGCAGAAATGTGTCATTGTGGGCATGGGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR CAA 90 bp | CCCTGGGCTAGTCAGTTAATACTGCTATACTCTTTTAGCTGCCTCTaGTATAAAGTGGGCACAAAGACATATCTACCTAAAAAGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PWASQLILLYSFSCL*YKVGTKTYLPKKQL Trigger: TAGCTGCTTTTTAGGTAGATATGTCTTTGTGCCCACTTTATACAAGAGGCAGCTAAAAGAGTATAGCAGTATTAACTGACTAGCCCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR TCA 72 bp | CATTGGATTCCCGGGAAGTGGAGGCAGAGATGGCTATaGGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: HWIPGKWRQRWL*ACQESAPARHL Trigger: CAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGCCTCCACTTCCCGGGAATCCAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR GCA 72 bp | GCAGAGATGGCTATGAGCCTGCCAGGAATCAGCCCCTaGCCGGCACTTGGGGAGGACAGCAAGTGCTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: AEMAMSLPGISP*PALGEDSKCSQ Trigger: TTGAGAGCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR GCA 72 bp | ATCAGCCCCTGCCCGGCACTTGGGGAGGACAGCAAGTaGTCTCAACTGATGAGTCATCTTCCAGCCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: ISPCPALGEDSK*SQLMSHLPALH Trigger: GTGCAGGGCTGGAAGATGACTCATCAGTTGAGAGCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR CCA 72 bp | TATGAGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTaGGGAGGACAGCAAGTGCTCTCAACTGATGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: YEPARNQPLPGT*GGQQVLSTDES Trigger: TGACTCATCAGTTGAGAGCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| 3UTR CCA 72 bp | CAGGGCTGCCCACTGCTTGTTCAAGTCAAGGCTCACTaGACAGAGGCCACTCACTCTGTACCTGTCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: QGCPLLVQVKAH*TEATHSVPVLC Trigger: ACAGAGGACAGGTACAGAGTGAGTGGCCTCTGTCCAGTGAGCCTTGACTTGAACAAGCAGTGGGCAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR GCA 72 bp | TCTGGAGTCTACAGTCTCAACTCCAGGGCTGCCCACTaGTTGTTCAAGTCAAGGCTCACTGGACAGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGVYSLNSRAAH*LFKSRLTGQRP Trigger: TGGCCTCTGTCCAGTGAGCCTTGACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGACTGTAGACTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR CCA 72 bp | ACTTTACTTGGAGAAACCCAGCCCTCAGTGTCACACTaGAGCAGGTTCTGGGCAGGCACAGATGACAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TLLGETQPSVSH*SRFWAGTDDKA Trigger: GGCCTTGTCATCTGTGCCTGCCCAGAACCTGCTCCAGTGTGACACTGAGGGCTGGGTTTCTCCAAGTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
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| 3UTR CCA 72 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTaGCTTTGCAGACTTGGCGCTTTAGAGGGGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: QRTTPELHYEST*LCRLGALEGTG Trigger: TCCAGTCCCCTCTAAAGCGCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATaGCAGTGTCCAGGCAGGCATGGTGCAGGAGGATCT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSVIIKTGA*QCPGRHGAGGS Trigger: AGATCCTCCTGCACCATGCCTGCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| 3UTR CCA 72 bp | GAAACCCAGCCCTCAGTGTCACACTGGAGCAGGTTCTaGGCAGGCACAGATGACAAGGCCAACAGAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: ETQPSVSHWSRF*AGTDDKANRNK Trigger: TTTATTTCTGTTGGCCTTGTCATCTGTGCCTGCCCAGAACCTGCTCCAGTGTGACACTGAGGGCTGGGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCCAGATGAGGCGGCCTTaGAGGAGCAAAGTACTTATC | + |
|
Preference number: 3 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGQMRRP*RSKVLI Trigger: GATAAGTACTTTGCTCCTCAAAGGCCGCCTCATCTG...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCCCGGGAAGTGGAGGCAGAGATGGCTATGAGCCTGCCAGGAATCAGCCCCAAAGTTCAAAAGGTATaGAGAATAAGAGAGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DSREVEAEMAMSLPGISPKVQKV*RIREEA Trigger: TGCCTCCTCTCTTATTCTCAATACCTTTTGAACTTT...GGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGCCTCCACTTCCCGGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| 3UTR TCA 72 bp | ATAAGGTACCCAGAGAACAACCCCAGAACTGCACTATaGGAGCACCTGGCTTTGCAGACTTGGCGCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IRYPENNPRTAL*EHLALQTWRFR Trigger: TCTAAAGCGCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTGGGTACCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCACTGCAAAGGTCATATaGAGTAATTGTAGCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGTAKVI*SNCSRN Trigger: GTTCCTGCTACAATTACTCAATATGACCTTTGCAGT...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR TCA 72 bp | TCCTTCTGCTGTACTAAGCCAGTGAGCTTTAGGGTTTaGCTGTCACTATGTCCTAGCCAACTCTGGAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFCCTKPVSFRV*LSLCPSQLWSL Trigger: TAGACTCCAGAGTTGGCTAGGACATAGTGACAGTCAAACCCTAAAGCTCACTGGCTTAGTACAGCAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR GCA 72 bp | ACAGAGGCCACTCACTCTGTACCTGTCCTCTGTGGCTaGTTTCAGACTGCAAAGGTCATATTGAGTAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: TEATHSVPVLCG*FQTAKVILSNC Trigger: ACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGGTACAGAGTGAGTGGCCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR GCA 72 bp | GGTCTCTTAAAGCCCATGCCCACAATGACACATTTCTaGCAAGGTCTTACCAACTCCAAAAAGGCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GLLKPMPTMTHF*QGLTNSKKASS Trigger: AGATGAGGCCTTTTTGGAGTTGGTAAGACCTTGGCAGAAATGTGTCATTGTGGGCATGGGCTTTAAGAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR GCA 72 bp | TTAAACTTTGATCAAGAAACCAACTCCACAGCTGTCTaGAGTGCTGAACGTCTCTGCCCAGACCTCTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LNFDQETNSTAV*SAERLCPDLST Trigger: TGTAGAGAGGTCTGGGCAGAGACGTTCAGCACTGCAGACAGCTGTGGAGTTGGTTTCTTGATCAAAGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| 3UTR GCA 72 bp | CTAAAGCCCTGCTGTGGGTTTCCCTCTGATCCCTTCTaGCTTCAAGATAACAAAATGTTTCCTTCTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LKPCCGFPSDPF*LQDNKMFPSAV Trigger: TACAGCAGAAGGAAACATTTTGTTATCTTGAAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR CCA 72 bp | TCCAAAAAGGCCTCATCTCTAAATAGTGCCACTCCCTaGGCCAAACATATTCAAACCACCATAAGGTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKKASSLNSATP*AKHIQTTIRYP Trigger: TGGGTACCTTATGGTGGTTTGAATATGTTTGGCCCAGGGAGTGGCACTATTTAGAGATGAGGCCTTTTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR GCA 72 bp | ATGGGTGTTTTGCCTGTAGTATGTATACTACATGTGTaGAGTTCCCATGACGGCCAGAAGAAGACATTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MGVLPVVCILHV*SSHDGQKKTLD Trigger: ATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACATGTAGTATACATACTACAGGCAAAACACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| 3UTR TCA 72 bp | GATAACAAAATGTTTCCTTCTGCTGTACTAAGCCAGTaGGCTTTAGGGTTTGACTGTCACTATGTCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DNKMFPSAVLSQ*ALGFDCHYVLA Trigger: GGCTAGGACATAGTGACAGTCAAACCCTAAAGCTCACTGGCTTAGTACAGCAGAAGGAAACATTTTGTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR CCA 72 bp | GGAGACATTAAAAGTGCAGATGATACTAGCCCCACTTaGTTAAACTTTGATCAAGAAACCAACTCCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GDIKSADDTSPT*LNFDQETNSTA Trigger: AGCTGTGGAGTTGGTTTCTTGATCAAAGTTTAACCAAGTGGGGCTAGTATCATCTGCACTTTTAATGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| 3UTR TCA 72 bp | AAAGGAACCATCAAACATGGTTTTATACTAGTTACATaGCCCTGGGCTAGTCAGTTAATACTGCTATACTCT | + |
|
Preference number: 3 (lower is better) Translates to: KGTIKHGFILVT*PWASQLILLYS Trigger: AGAGTATAGCAGTATTAACTGACTAGCCCAGGGTCATGTAACTAGTATAAAACCATGTTTGATGGTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGTGTCACACTGGAGCAGGTTCTGGGCAGGCACAGATGACAAGGCCAACCCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSVSHWSRFWAGTDDKANPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...GTTGGCCTTGTCATCTGTGCCTGCCCAGAACCTGCTCCAGTGTGACACTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTGGGGAGGACAGCAAGTGCGCTGCCACAAGTATCTaGAATGGATCGACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: MSLPGISPCPALGEDSKCAATSI*NGSTIT Trigger: TGTGATTGTCGATCCATTTCAGATACTTGTGGCAGC...GCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCAGGAATCAGCCCCTGCCCGGCACTTGGGGAGGACAGCAAGTGCTCTCGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACQESAPARHLGRTASALEPCYF*KTFQRH Trigger: GTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTC...GAGAGCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| 3UTR CAA 72 bp | GGAGTCTACAGTCTCAACTCCAGGGCTGCCCACTGCTaGTTCAAGTCAAGGCTCACTGGACAGAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GVYSLNSRAAHC*FKSRLTGQRPL Trigger: GAGTGGCCTCTGTCCAGTGAGCCTTGACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGACTGTAGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCCATGACGGCCAGAAGAAGACATTGGATTCCCGGGAAGTGGAGGCAGAGACCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPMTARRRHWIPGKWRQRPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...TCTCTGCCTCCACTTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| CDS-3UTR TCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCCCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRTTPELHYESTWLCRLGPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTATGAGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTGGGGAGGACATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EMAMSLPGISPCPALGEDMNGFV*CHKYLK Trigger: TTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCAT...GTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCATAGCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| 3UTR CAA 72 bp | CATGTGTGCAGTTCCCATGACGGCCAGAAGAAGACATaGGATTCCCGGGAAGTGGAGGCAGAGATGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: HVCSSHDGQKKT*DSREVEAEMAM Trigger: CATAGCCATCTCTGCCTCCACTTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGCCTGCCAGGAATCAGCCCCTGCCCGGCACTTGGGGAGGACAGCAAGTGCGATCGACAATCACATTaGGGTTTATCAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSLPGISPCPALGEDSKCDRQSH*GLSMNH Trigger: ATGGTTCATTGATAAACCCCAATGTGATTGTCGATC...GCACTTGCTGTCCTCCCCAAGTGCCGGGCAGGGGCTGATTCCTGGCAGGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACCCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR GCA 90 bp | CCGCAGAGGGCTCTAAAGCCCTGCTGTGGGTTTCCCTCTGATCCCTTCTGCCTTATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQRALKPCCGFPSDPFCLMNGFV*CHKYLK Trigger: TTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCAT...AAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAGAGCCCTCTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTGTGGGAAGAGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGALEGTGGAELTVLVGREPCYF*KTFQRH Trigger: GTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTC...TCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCGCTGCCACAAGTATCTaGAATGGATCGACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QRTTPELHYESTWLCRLGAATSI*NGSTIT Trigger: TGTGATTGTCGATCCATTTCAGATACTTGTGGCAGC...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATTGAGTAATTGTAGCCCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLCGCFQTAKVILSNCSPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...GCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR CCA 90 bp | CCGCAGAGGGCTCTAAAGCCCTGCTGTGGGTTTCCCTCTGATCCCTTCTGCCTTGATCGACAATCACATTaGGGTTTATCAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQRALKPCCGFPSDPFCLDRQSH*GLSMNH Trigger: ATGGTTCATTGATAAACCCCAATGTGATTGTCGATC...AAGGCAGAAGGGATCAGAGGGAAACCCACAGCAGGGCTTTAGAGCCCTCTGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR CAA 72 bp | GTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATaGAGTAATTGTAGCAGGAACCAGATGAGGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCGCFQTAKVI*SNCSRNQMRRP Trigger: AGGCCGCCTCATCTGGTTCCTGCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR GCA 90 bp | CTTTACTTGGAGAAACCCAGCCCTCAGTGTCACACTGGAGCAGGTTCTGGGCAGATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLEKPSPQCHTGAGSGQMNGFV*CHKYLK Trigger: TTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCAT...CTGCCCAGAACCTGCTCCAGTGTGACACTGAGGGCTGGGTTTCTCCAAGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTGTGGGAAGACCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGALEGTGGAELTVLVGRPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...TCTTCCCACAAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGCAGTTCCCATGACGGCCAGAAGAAGACATTGGATTCCCGGGAAGTGGGAACTCTTCAAAATGTaGAGGACAAACCTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MCAVPMTARRRHWIPGKWELFKM*RTNLLD Trigger: GTCAAGAAGGTTTGTCCTGCACATTTTGAAGAGTTC...CCACTTCCCGGGAATCCAATGTCTTCTTCTGGCCGTCATGGGAACTGCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACGCTGCCACAAGTATCTaGAATGGATCGACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNAATSI*NGSTIT Trigger: TGTGATTGTCGATCCATTTCAGATACTTGTGGCAGC...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGAACAACCCCAGAACTGCACTATGAGAGCACCTGGCTTTGCAGACTTGGCGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRTTPELHYESTWLCRLGVYISS*LPRALL Trigger: TAACAAGGCTCTCGGAAGTCAAGAAGATATATAAAC...GCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| 3UTR CAA 72 bp | TTGAGTAATTGTAGCAGGAACCAGATGAGGCGGCCTTaGAGGAGCAAAGTACTTATCTGGCTCTTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSNCSRNQMRRP*RSKVLIWLFTE Trigger: CTCTGTGAAGAGCCAGATAAGTACTTTGCTCCTCAAAGGCCGCCTCATCTGGTTCCTGCTACAATTACTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR TCA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCGCTGCCACAAGTATCTaGAATGGATCGACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: GIKGMHHHARLSVDILNIAATSI*NGSTIT Trigger: TGTGATTGTCGATCCATTTCAGATACTTGTGGCAGC...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR CCA 90 bp | AACTCTGGAGTCTACAGTCTCAACTCCAGGGCTGCCCACTGCTTGTTCAAGTCAGATCGACAATCACATTaGGGTTTATCAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSGVYSLNSRAAHCLFKSDRQSH*GLSMNH Trigger: ATGGTTCATTGATAAACCCCAATGTGATTGTCGATC...TGACTTGAACAAGCAGTGGGCAGCCCTGGAGTTGAGACTGTAGACTCCAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNEPCYF*KTFQRH Trigger: GTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTC...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR TCA 90 bp | TTAATCATTCAAAATTTATACAACCACAGTGATGAGCAAGCAGTGTCAGCAGAGCCCAGTCTGTGGAGATaGACGGCTTTGTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIIQNLYNHSDEQAVSAEPSLWR*TALFAA Trigger: GGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGG...CTCTGCTGACACTGCTTGCTCATCACTGTGGTTGTATAAATTTTGAATGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNMNGFV*CHKYLK Trigger: TTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCAT...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGTACTAACTTTACTTGGAGAAACCCAGCCCTCAGTGTCACACTGGAGCGATCGACAATCACATTaGGGTTTATCAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLTLLGETQPSVSHWSDRQSH*GLSMNH Trigger: ATGGTTCATTGATAAACCCCAATGTGATTGTCGATC...GCTCCAGTGTGACACTGAGGGCTGGGTTTCTCCAAGTAAAGTTAGTACTAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
||
| CDS-3UTR CCA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIKGMHHHARLSVDILNIEPCYF*KTFQRH Trigger: GTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTC...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNVYISS*LPRALL Trigger: TAACAAGGCTCTCGGAAGTCAAGAAGATATATAAAC...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
||
| CDS-3UTR GCA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GIKGMHHHARLSVDILNIMNGFV*CHKYLK Trigger: TTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCAT...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR GCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACGATCGACAATCACATTaGGGTTTATCAATGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: AGIKGMHHHARLSVDILNDRQSH*GLSMNH Trigger: ATGGTTCATTGATAAACCCCAATGTGATTGTCGATC...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR TCA 90 bp | TCTCCAGGAGACATTAAAAGTGCAGATGATACTAGCCCCACTTGGTTAAACTTTGCTGCCACAAGTATCTaGAATGGATCGACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: SPGDIKSADDTSPTWLNFAATSI*NGSTIT Trigger: TGTGATTGTCGATCCATTTCAGATACTTGTGGCAGC...AAAGTTTAACCAAGTGGGGCTAGTATCATCTGCACTTTTAATGTCTCCTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: GIKGMHHHARLSVDILNIVYISS*LPRALL Trigger: TAACAAGGCTCTCGGAAGTCAAGAAGATATATAAAC...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR GCA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: GIKGMHHHARLSVDILNIPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR GCA 90 bp | CCTGTCCTCTGTGGCTGCTTTCAGACTGCAAAGGTCATATTGAGTAATTGTAGCCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: PVLCGCFQTAKVILSNCSPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...GCTACAATTACTCAATATGACCTTTGCAGTCTGAAAGCAGCCACAGAGGACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS-3UTR TCA 90 bp | AAAGCCCATGCCCACAATGACACATTTCTGCCAAGGTCTTACCAACTCCAAAAAGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: KAHAHNDTFLPRSYQLQKVYISS*LPRALL Trigger: TAACAAGGCTCTCGGAAGTCAAGAAGATATATAAAC...TTTTTGGAGTTGGTAAGACCTTGGCAGAAATGTGTCATTGTGGGCATGGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS-3UTR GCA 90 bp | TTTACTGGTATGGGTGTTTTGCCTGTAGTATGTATACTACATGTGTGCAGTTCCCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FTGMGVLPVVCILHVCSSPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...GGAACTGCACACATGTAGTATACATACTACAGGCAAAACACCCATACCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| CDS-3UTR CCA 90 bp | TTAATCATTCAAAATTTATACAACCACAGTGATGAGCAAGCAGTGTCAGCAGAGGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIIQNLYNHSDEQAVSAEEPCYF*KTFQRH Trigger: GTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTC...CTCTGCTGACACTGCTTGCTCATCACTGTGGTTGTATAAATTTTGAATGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
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| CDS-3UTR GCA 90 bp | TTAATCATTCAAAATTTATACAACCACAGTGATGAGCAAGCAGTGTCAGCAGAGCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LIIQNLYNHSDEQAVSAEPVVLV*FHLQCK Trigger: TTTACATTGAAGATGGAAGCAAACAAGTACCACAGG...CTCTGCTGACACTGCTTGCTCATCACTGTGGTTGTATAAATTTTGAATGATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
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| CDS-3UTR GCA 90 bp | ATGTTAATCATTCAAAATTTATACAACCACAGTGATGAGCAAGCAGTGTCAGCAGAACTCTTCAAAATGTaGAGGACAAACCTTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: MLIIQNLYNHSDEQAVSAELFKM*RTNLLD Trigger: GTCAAGAAGGTTTGTCCTGCACATTTTGAAGAGTTC...TGCTGACACTGCTTGCTCATCACTGTGGTTGTATAAATTTTGAATGATTAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
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| 3UTR CAA 72 bp | AGTCAGTTAATACTGCTATACTCTTTTAGCTGCCTCTaGTATAAAGTGGGCACAAAGACATATCTACCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SQLILLYSFSCL*YKVGTKTYLPK Trigger: TTTAGGTAGATATGTCTTTGTGCCCACTTTATACAAGAGGCAGCTAAAAGAGTATAGCAGTATTAACTGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS-3UTR CAA 90 bp | GATTCCCGGGAAGTGGAGGCAGAGATGGCTATGAGCCTGCCAGGAATCAGCCCCGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: DSREVEAEMAMSLPGISPDERLC*LPQVSE Trigger: TTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATC...GGGGCTGATTCCTGGCAGGCTCATAGCCATCTCTGCCTCCACTTCCCGGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089570.7 |
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| CDS-3UTR CAA 90 bp | CCCTCAGTGTCACACTGGAGCAGGTTCTGGGCAGGCACAGATGACAAGGCCAACGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: PSVSHWSRFWAGTDDKANDERLC*LPQVSE Trigger: TTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATC...GTTGGCCTTGTCATCTGTGCCTGCCCAGAACCTGCTCCAGTGTGACACTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113751.8 |
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| CDS-3UTR CAA 90 bp | CTTTGCAGACTTGGCGCTTTAGAGGGGACTGGAGGGGCAGAACTGACTGTGCTTGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LCRLGALEGTGGAELTVLDERLC*LPQVSE Trigger: TTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATC...AAGCACAGTCAGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAGTCTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS CCA 90 bp | ATGTGCAGGACAAACCTTCTTGACTTCCGAGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCACCTGCTGGCCTTCCACTTGAGATAC | + |
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Preference number: 5 (lower is better) Translates to: MCRTNLLDFREPCYF*KTFQRHLLAFHLRY Trigger: GTATCTCAAGTGGAAGGCCAGCAGGTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTCTCGGAAGTCAAGAAGGTTTGTCCTGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
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| CDS-3UTR CAA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GIKGMHHHARLSVDILNIDERLC*LPQVSE Trigger: TTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATC...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR CAA 90 bp | GGTTCAGAGGTTCAGTCTGTTATCATCAAGACAGGAGCATGGCAGTGTCCAGGCAGTTTATATATCTTCTaGACTTCCGAGAGCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GSEVQSVIIKTGAWQCPGSLYIF*TSESLV Trigger: AACAAGGCTCTCGGAAGTCAAGAAGATATATAAACT...GCCTGGACACTGCCATGCTCCTGTCTTGATGATAACAGACTGAACCTCTGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCCATGCCCACAATGACACATTTCTGCCAAGGTCTTACCAACTCCAAAAAGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: KAHAHNDTFLPRSYQLQKDERLC*LPQVSE Trigger: TTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATC...TTTTTGGAGTTGGTAAGACCTTGGCAGAAATGTGTCATTGTGGGCATGGGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067137.14 ENSMUST00000113753.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACAGTTTATATATCTTCTaGACTTCCGAGAGCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: AGIKGMHHHARLSVDILNSLYIF*TSESLV Trigger: AACAAGGCTCTCGGAAGTCAAGAAGATATATAAACT...GTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS-3UTR CAA 90 bp | GGGATTAAAGGCATGCATCACCACGCCCGGCTTTCTGTTGACATTTTAAACATCAGTTTATATATCTTCTaGACTTCCGAGAGCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GIKGMHHHARLSVDILNISLYIF*TSESLV Trigger: AACAAGGCTCTCGGAAGTCAAGAAGATATATAAACT...GATGTTTAAAATGTCAACAGAAAGCCGGGCGTGGTGATGCATGCCTTTAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS TCA 90 bp | ACGTCCCAATCCTCTCTTCTTGTGATGACAGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTATTTCTGGAAGACTTTCCAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TSQSSLLVMTVYISS*LPRALLFLEDFPKA Trigger: TGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTCTCGGAAGTCAAGAAGATATATAAACTGTCATCACAAGAAGAGAGGATTGGGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS TCA 72 bp | GGAAGACTTTCCAAAGGCACCTGCTGGCCTTCCACTTaGGATACTAGGTGTTCCTGTGGTACTTGTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GRLSKGTCWPST*DTRCSCGTCLL Trigger: AAGCAAACAAGTACCACAGGAACACCTAGTATCTCAAGTGGAAGGCCAGCAGGTGCCTTTGGAAAGTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067137.14 ENSMUST00000089570.7 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 ENSMUST00000202803.4 |
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| CDS CCA 72 bp | ACAAACCTTCTTGACTTCCGAGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCACCTGCTGGCCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TNLLDFREPCYF*KTFQRHLLAFH Trigger: GTGGAAGGCCAGCAGGTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTCTCGGAAGTCAAGAAGGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089570.7 ENSMUST00000202803.4 |
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| CDS CCA 72 bp | ATATATCTTCTTGACTTCCGAGAGCCTTGTTATTTCTaGAAGACTTTCCAAAGGCACCTGCTGGCCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IYLLDFREPCYF*KTFQRHLLAFH Trigger: GTGGAAGGCCAGCAGGTGCCTTTGGAAAGTCTTCCAGAAATAACAAGGCTCTCGGAAGTCAAGAAGATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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| CDS GCA 72 bp | CATTTTTCCCAGTCTGTGGAGATGAACGGCTTTGTTTaGTGCCACAAGTATCTGAAATGGATCGACAATCAC | + |
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Preference number: 6 (lower is better) Translates to: HFSQSVEMNGFV*CHKYLKWIDNH Trigger: GTGATTGTCGATCCATTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000067137.14 ENSMUST00000089570.7 ENSMUST00000113751.8 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000149026.5 ENSMUST00000200680.4 ENSMUST00000202803.4 |
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| CDS CAA 72 bp | TCATTTTTCCCAGTCTGTGGAGATGAACGGCTTTGTTaGCTGCCACAAGTATCTGAAATGGATCGACAATCA | + |
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Preference number: 6 (lower is better) Translates to: SFFPVCGDERLC*LPQVSEMDRQS Trigger: TGATTGTCGATCCATTTCAGATACTTGTGGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGGAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000067137.14 ENSMUST00000089570.7 ENSMUST00000113751.8 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000149026.5 ENSMUST00000200680.4 ENSMUST00000202803.4 |
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| CDS CAA 72 bp | TCATTTTTCCCAGTCTGTGGAGATGAACGGCTTTGTTaGCTGCCACAAGTATCACATTGGGGTTTATCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFFPVCGDERLC*LPQVSHWGLSM Trigger: CATTGATAAACCCCAATGTGATACTTGTGGCAGCAAACAAAGCCGTTCATCTCCACAGACTGGGAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201939.4 |
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| CDS GCA 72 bp | CCACTTGAGATACTAGGTGTTCCTGTGGTACTTGTTTaGTTCCATCTTCAATGTAAACAATCAGAACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PLEILGVPVVLV*FHLQCKQSELK Trigger: CTTCAGTTCTGATTGTTTACATTGAAGATGGAAGCAAACAAGTACCACAGGAACACCTAGTATCTCAAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000067137.14 ENSMUST00000089570.7 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000149026.5 ENSMUST00000200680.4 ENSMUST00000202803.4 |
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| CDS TCA 72 bp | TCCTCTCTTCTTGTGATGACAGTTTATATATCTTCTTaGCTTCCGAGAGCCTTGTTATTTCTGGAAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLLVMTVYISS*LPRALLFLEDF Trigger: AAAGTCTTCCAGAAATAACAAGGCTCTCGGAAGTCAAGAAGATATATAAACTGTCATCACAAGAAGAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067137.14 ENSMUST00000113752.8 ENSMUST00000113753.8 ENSMUST00000200680.4 |
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