Pregenerated sensors for TPRGL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029030Ensembl transcript IDs: ENSMUST00000030896.15, ENSMUST00000105639.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGGATACATGCCCTCCTTCCCTCCAGCCAGTGGGTGGCATGAGGTaGCACAGGGAGTCCCCACCACCTTGGTTTCCGGGACGCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SDTCPPSLQPVGGMR*HRESPPPWFPGRSC Trigger: ACAGCTGCGTCCCGGAAACCAAGGTGGTGGGGACTCCCTGTGCCACCTCATGCCACCCACTGGCTGGAGGGAAGGAGGGCATGTATCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR TCA 90 bp | TCTAATCGGATACATGCCCTCCTTCCCTCCAGCCAGTGGGTGGCATaGGGTGGCACAGGGAGTCCCCACCACCTTGGTTTCCGGGACGCA | + |
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Preference number: 1 (lower is better) Translates to: SNRIHALLPSSQWVA*GGTGSPHHLGFRDA Trigger: TGCGTCCCGGAAACCAAGGTGGTGGGGACTCCCTGTGCCACCTCATGCCACCCACTGGCTGGAGGGAAGGAGGGCATGTATCCGATTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR CCA 90 bp | ACTATTCTAATCGGATACATGCCCTCCTTCCCTCCAGCCAGTGGGTaGCATGAGGTGGCACAGGGAGTCCCCACCACCTTGGTTTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: TILIGYMPSFPPASG*HEVAQGVPTTLVSG Trigger: CCCGGAAACCAAGGTGGTGGGGACTCCCTGTGCCACCTCATGCCACCCACTGGCTGGAGGGAAGGAGGGCATGTATCCGATTAGAATAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR TCA 90 bp | AATGTCTTTACTAGAACAAAAGCACAGGCTGAAAACAGGTGCATCTaGGGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: NVFTRTKAQAENRCI*GHLSSWIGHGIPVT Trigger: TGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACCTCAGATGCACCTGTTTTCAGCCTGTGCTTTTGTTCTAGTAAAGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR CCA 90 bp | GGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTTGTGGGTGGCATGAGGTaGCACAGGGAGTCCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: GHLSSWIGHGIPVTSMPVVGGMR*HRESPP Trigger: TGGTGGGGACTCCCTGTGCCACCTCATGCCACCCAC...AACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR TCA 90 bp | GAACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCATGGTATGGGGGCAGCTaGATCTGCCTTTGTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: ERQQQAVCGWRVKAQQCSWYGGS*ICLCKI Trigger: AATCTTACAAAGGCAGATTCAGCTGCCCCCATACCA...TGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCAGACTGTCTTTCTTAGTGACTGGCTGCTGGCTGCTACTGTATTTAGCTACATTGTGCTCGGCATaGTGGAGGGAGAACGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PGRLSFLVTGCWLLLYLATLCSA*WRENVA Trigger: CGCCACGTTCTCCCTCCAGCATGCCGAGCACAATGT...AGCTAAATACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGACAGTCTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGCCAGGCAGACTGTCTTTCTTAGTGACTGGCTGCTGGCTGCTACTGTATTTTGTAAGATTGTGTTaGCAAGATGTCCAATATCCA | + |
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Preference number: 2 (lower is better) Translates to: ELPGRLSFLVTGCWLLLYFVRLC*QDVQYP Trigger: TGGATATTGGACATCTTGGCAACACAATCTTACAAA...ATACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGACAGTCTGCCTGGCAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR CCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACGTCTTTCTTAGTGACTaGCTGCTGGCTGCTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: NPTIQSLLNRDRMIETHHVFLSD*LLAATV Trigger: TACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGAC...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR CCA 72 bp | ATCGGATACATGCCCTCCTTCCCTCCAGCCAGTGGGTaGCATGAGGTGGCACAGGGAGTCCCCACCACCTTG | + |
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Preference number: 3 (lower is better) Translates to: IGYMPSFPPASG*HEVAQGVPTTL Trigger: CAAGGTGGTGGGGACTCCCTGTGCCACCTCATGCCACCCACTGGCTGGAGGGAAGGAGGGCATGTATCCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR CAA 90 bp | GGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTTGGAGTCCCCACCACCTaGGTTTCCGGGACGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: GHLSSWIGHGIPVTSMPVGVPTT*VSGTQL Trigger: CAGCTGCGTCCCGGAAACCAAGGTGGTGGGGACTCC...AACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR GCA 72 bp | AGCGAGAGGTATAGAGTGACAGGCCAGCATCTACAGTaGACTGGCAAGGCTAGAACGACAGCAGCAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SERYRVTGQHLQ*TGKARTTAASC Trigger: ACAGCTTGCTGCTGTCGTTCTAGCCTTGCCAGTGCACTGTAGATGCTGGCCTGTCACTCTATACCTCTCGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR TCA 72 bp | TGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCAGTaGGCTCTAGGATGCTCGTCTGTTTATAGCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: CVAGVSKLSSAQ*ALGCSSVYSMH Trigger: GTGCATGCTATAAACAGACGAGCATCCTAGAGCTCACTGAGCACTGCTGAGCTTTGACACGCCAGCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGCCAGGCAGACTGTCTTTCTTAGTGACTGGCTGCTGGCTGCTACTGTATTCTGCCTTTGTAAGATaGTGTTGCCAAGATGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: ELPGRLSFLVTGCWLLLYSAFVR*CCQDVQ Trigger: TTGGACATCTTGGCAACACAATCTTACAAAGGCAGA...ATACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGACAGTCTGCCTGGCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR TCA 72 bp | ACTAGAACAAAAGCACAGGCTGAAAACAGGTGCATCTaGGGTCACCTTTCCTCTTGGATAGGCCATGGCATT | + |
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Preference number: 3 (lower is better) Translates to: TRTKAQAENRCI*GHLSSWIGHGI Trigger: AATGCCATGGCCTATCCAAGAGGAAAGGTGACCTCAGATGCACCTGTTTTCAGCCTGTGCTTTTGTTCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | AGGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTCCACGTAGGTCTCGATaGGGAGGGGGCGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RSPFLLDRPWHSGHIHAGPRRSR*GGGAPA Trigger: TGCTGGAGCGCCCCCTCCTCATCGAGACCTACGTGG...ACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | GAACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCACTCTGCTTGTCCCACTaGATGCGAACCCCAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ERQQQAVCGWRVKAQQCSLCLSH*MRTPKP Trigger: AGGCTTTGGGGTTCGCATTCAGTGGGACAAGCAGAG...TGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | GAACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCAAGTGGGCTCTCCTTCTaGGCCTTCTTGACAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ERQQQAVCGWRVKAQQCSSGLSF*AFLTAW Trigger: CCAAGCTGTCAAGAAGGCCCAGAAGGAGAGCCCACT...TGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | ACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCAGTTCTTGCCCCTGGTCATaGAGTAGCCCAGCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTAASCVWLACQSSAVLSSCPWS*SSPAWL Trigger: AAGCCAAGCTGGGCTACTCCATGACCAGGGGCAAGA...ACTGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR GCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACCCGCCGTGGGGCTCGTaGCCGCCGAGTCCACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: NPTIQSLLNRDRMIETHHPPWGS*PPSPPC Trigger: ACACGGTGGACTCGGCGGGCACGAGCCCCACGGCGG...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | ACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCAGTGGATCAGGAGAGCCTTaGAGCTTTCCAAATGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TTAASCVWLACQSSAVLSGSGEP*SFPNGT Trigger: TGTGCCATTTGGAAAGCTTCAAGGCTCTCCTGATCC...ACTGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR GCA 90 bp | GGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTTGCTTGTCCCACTGAATaGGAACCCCAAAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GHLSSWIGHGIPVTSMPVACPTE*EPQSLL Trigger: GAGAAGGCTTTGGGGTTCGCATTCAGTGGGACAAGC...AACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGACTGTCTTTCTTAGTGACTGGCTGCTGGCTGCTACTGTATTTAGCTCAGATGAGCAGCGACTaGTCGGTGACCAGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGRLSFLVTGCWLLLYLAQMSSD*SVTSTS Trigger: GCTGGTGCTGGTCACCGACCAGTCGCTGCTCATCTG...AGCTAAATACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGACAGTCTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | AGGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTCCATTGGGTGTTCTATaGAGGTGGCATAGGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: RSPFLLDRPWHSGHIHAGPLGVL*RWHRAC Trigger: ACATGCCCTATGCCACCTTCATAGAACACCCAATGG...ACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACAGCAGCCACACCCCCTaGATCTCGCCGTCCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: NPTIQSLLNRDRMIETHHSSHTP*ISPSST Trigger: CGTGGAGGACGGCGAGATCCAGGGGGTGTGGCTGCT...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | AGGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTGACTTCGGAGGAAACTaGAATTCTCCACAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: RSPFLLDRPWHSGHIHAGDFGGN*NSPQEM Trigger: CATCTCCTGTGGAGAATTCCAGTTTCCTCCGAAGTC...ACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | ACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCAGTTTGAAGCTTTCCAAATaGCACAGAGACGCTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TTAASCVWLACQSSAVLSLKLSK*HRDAVF Trigger: GAAGACAGCGTCTCTGTGCCATTTGGAAAGCTTCAA...ACTGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR GCA 90 bp | ATTCTAAGTCAGACACATTCACAGAAAGGCAGGTTCACCAGGAGCTGCCAGGCACTGTCTTCTCGTCCATaGCAGCCATTGGGTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: ILSQTHSQKGRFTRSCQALSSRP*QPLGVL Trigger: TAGAACACCCAATGGCTGGCATGGACGAGAAGACAG...TGCCTGGCAGCTCCTGGTGAACCTGCCTTTCTGTGAATGTGTCTGACTTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | CAACTAAATATACATAATCCACTTGACTATTCTAATCGGATACATGCCCTCCTTGCAGCGACTGGTCGGTaGCCAGCACCAGCCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QLNIHNPLDYSNRIHALLAATGR*PAPAAP Trigger: AGGAGCGGCTGGTGCTGGTCACCGACCAGTCGCTGC...AAGGAGGGCATGTATCCGATTAGAATAGTCAAGTGGATTATGTATATTTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACGTCCATGCCAGCCATTaGGTGTTCTATGAAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NPTIQSLLNRDRMIETHHVHASH*VFYEGG Trigger: GCCACCTTCATAGAACACCCAATGGCTGGCATGGAC...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR TCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACACCACCTGCTGGCACTaGAGGCTGATGAAGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: NPTIQSLLNRDRMIETHHTTCWH*RLMKSY Trigger: ATATGACTTCATCAGCCTTCAGTGCCAGCAGGTGGT...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CCA 90 bp | AACCCAACTATTCAGTCCCTTTTAAACAGAGACAGGATGATAGAAACCCACCACGCCTTCTTGACAGCTTaGATCAGGAGAGCCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NPTIQSLLNRDRMIETHHAFLTA*IRRALK Trigger: CTTCAAGGCTCTCCTGATCCAAGCTGTCAAGAAGGC...GTGGTGGGTTTCTATCATCCTGTCTCTGTTTAAAAGGGACTGAATAGTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| 3UTR CAA 72 bp | AGTGGTATGGGGGCAGCTGAATCTGCCTTTGTAAGATaGTGTTGCCAAGATGTCCAATATCCAACTAAATAT | + |
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Preference number: 4 (lower is better) Translates to: SGMGAAESAFVR*CCQDVQYPTKY Trigger: ATATTTAGTTGGATATTGGACATCTTGGCAACACAATCTTACAAAGGCAGATTCAGCTGCCCCCATACCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS CCA 90 bp | CGGGCGCGGCGTGTAGGGTCGTGGACGTTCAGCGGCCACAACGTCTaGCGCAGCGGTGTGCCCGCCCCAGGCCGGCCCGCACCCGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: RARRVGSWTFSGHNV*RSGVPAPGRPAPAS Trigger: GGACGCGGGTGCGGGCCGGCCTGGGGCGGGCACACCGCTGCGCCAGACGTTGTGGCCGCTGAACGTCCACGACCCTACACGCCGCGCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS CCA 90 bp | CGGAACACGAAGTACTCCTTGACGCGGGCGCGGCGTGTAGGGTCGTaGACGTTCAGCGGCCACAACGTCTGGCGCAGCGGTGTGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RNTKYSLTRARRVGS*TFSGHNVWRSGVPA Trigger: GGCGGGCACACCGCTGCGCCAGACGTTGTGGCCGCTGAACGTCCACGACCCTACACGCCGCGCCCGCGTCAAGGAGTACTTCGTGTTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS-3UTR CAA 90 bp | AGGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTAGCCGCTCCTTCTCGTaGTTCCAGTGGTCCACCTCG | + |
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Preference number: 5 (lower is better) Translates to: RSPFLLDRPWHSGHIHAGSRSFS*FQWSTS Trigger: CGAGGTGGACCACTGGAACAACGAGAAGGAGCGGCT...ACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CAA 90 bp | ATTCTAAGTCAGACACATTCACAGAAAGGCAGGTTCACCAGGAGCTGCCAGGCAAACACGAAGTACTCCTaGACGCGGGCGCGGCGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ILSQTHSQKGRFTRSCQANTKYS*TRARRV Trigger: TACACGCCGCGCCCGCGTCAAGGAGTACTTCGTGTT...TGCCTGGCAGCTCCTGGTGAACCTGCCTTTCTGTGAATGTGTCTGACTTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CAA 90 bp | GAACGACAGCAGCAAGCTGTGTGTGGCTGGCGTGTCAAAGCTCAGCAGTGCTCATGGATCAGGAGAGCCTaGAAGCTTTCCAAATGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ERQQQAVCGWRVKAQQCSWIRRA*KLSKWH Trigger: GTGCCATTTGGAAAGCTTCAAGGCTCTCCTGATCCA...TGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS-3UTR CAA 90 bp | GAGCTGCCAGGCAGACTGTCTTTCTTAGTGACTGGCTGCTGGCTGCTACTGTATTCCTTCTGGGCCTTCTaGACAGCTTGGATCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ELPGRLSFLVTGCWLLLYSFWAF*TAWIRR Trigger: TCTCCTGATCCAAGCTGTCAAGAAGGCCCAGAAGGA...ATACAGTAGCAGCCAGCAGCCAGTCACTAAGAAAGACAGTCTGCCTGGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS CCA 90 bp | TTCCAAATGGCACAGAGACGCTGTCTTCTCGTCCATGCCAGCCATTaGGTGTTCTATGAAGGTGGCATAGGGCATGTTTGTAGACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: FQMAQRRCLLVHASH*VFYEGGIGHVCRPG Trigger: CCCTGGTCTACAAACATGCCCTATGCCACCTTCATAGAACACCCAATGGCTGGCATGGACGAGAAGACAGCGTCTCTGTGCCATTTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS-3UTR CAA 90 bp | GGTCACCTTTCCTCTTGGATAGGCCATGGCATTCCGGTCACATCCATGCCGGTTCTGATGAAGTCATATTaGCAGATGAGCAGCGACTGG | + |
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Preference number: 5 (lower is better) Translates to: GHLSSWIGHGIPVTSMPVLMKSY*QMSSDW Trigger: CCAGTCGCTGCTCATCTGCAAATATGACTTCATCAG...AACCGGCATGGATGTGACCGGAATGCCATGGCCTATCCAAGAGGAAAGGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS CAA 90 bp | TCGACCGCCTGCTCGATGGTGCCGGGCCGGAACACGAAGTACTCCTaGACGCGGGCGCGGCGTGTAGGGTCGTGGACGTTCAGCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: STACSMVPGRNTKYS*TRARRVGSWTFSGH Trigger: GTGGCCGCTGAACGTCCACGACCCTACACGCCGCGCCCGCGTCAAGGAGTACTTCGTGTTCCGGCCCGGCACCATCGAGCAGGCGGTCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS GCA 72 bp | ACGGGCCGTACCACGGCGCGGATCTCCTCGACCGCCTaGTCGATGGTGCCGGGCCGGAACACGAAGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: TGRTTARISSTA*SMVPGRNTKYS Trigger: GGAGTACTTCGTGTTCCGGCCCGGCACCATCGAGCAGGCGGTCGAGGAGATCCGCGCCGTGGTACGGCCCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS CCA 72 bp | AAGTACTCCTTGACGCGGGCGCGGCGTGTAGGGTCGTaGACGTTCAGCGGCCACAACGTCTGGCGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: KYSLTRARRVGS*TFSGHNVWRSG Trigger: ACCGCTGCGCCAGACGTTGTGGCCGCTGAACGTCCACGACCCTACACGCCGCGCCCGCGTCAAGGAGTACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS CAA 72 bp | TGCTCGATGGTGCCGGGCCGGAACACGAAGTACTCCTaGACGCGGGCGCGGCGTGTAGGGTCGTGGACGTTC | + |
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Preference number: 6 (lower is better) Translates to: CSMVPGRNTKYS*TRARRVGSWTF Trigger: GAACGTCCACGACCCTACACGCCGCGCCCGCGTCAAGGAGTACTTCGTGTTCCGGCCCGGCACCATCGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS TCA 72 bp | CTGTTGATGAAGGAAGGGCGGCTCTGCTTGTCCCACTaGATGCGAACCCCAAAGCCTTCTCTCTCGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLMKEGRLCLSH*MRTPKPSLSVS Trigger: GCTGACCGAGAGAGAAGGCTTTGGGGTTCGCATTCAGTGGGACAAGCAGAGCCGCCCTTCCTTCATCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105639.4 |
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| CDS CAA 90 bp | GGGCTCTCCTTCTGGGCCTTCTTGACAGCTTGGATCAGGAGAGCCTaGAAGCTTTCCAAATGGCACAGAGACGCTGTCTTCTCGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GLSFWAFLTAWIRRA*KLSKWHRDAVFSSM Trigger: CATGGACGAGAAGACAGCGTCTCTGTGCCATTTGGAAAGCTTCAAGGCTCTCCTGATCCAAGCTGTCAAGAAGGCCCAGAAGGAGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS TCA 72 bp | CTGTTGATGAAGGAAGGGCGGCTCTGCTTGTCCCACTaGATGCGAACCCCAAAGCCTTCTCTCTTGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLMKEGRLCLSH*MRTPKPSLLLS Trigger: GCTCAACAAGAGAGAAGGCTTTGGGGTTCGCATTCAGTGGGACAAGCAGAGCCGCCCTTCCTTCATCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030896.15 |
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| CDS CCA 72 bp | GCACAGAGACGCTGTCTTCTCGTCCATGCCAGCCATTaGGTGTTCTATGAAGGTGGCATAGGGCATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: AQRRCLLVHASH*VFYEGGIGHVC Trigger: ACAAACATGCCCTATGCCACCTTCATAGAACACCCAATGGCTGGCATGGACGAGAAGACAGCGTCTCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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| CDS CAA 72 bp | TTCTGGGCCTTCTTGACAGCTTGGATCAGGAGAGCCTaGAAGCTTTCCAAATGGCACAGAGACGCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FWAFLTAWIRRA*KLSKWHRDAVF Trigger: GAAGACAGCGTCTCTGTGCCATTTGGAAAGCTTCAAGGCTCTCCTGATCCAAGCTGTCAAGAAGGCCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030896.15 ENSMUST00000105639.4 |
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