Pregenerated sensors for TPRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002871Ensembl transcript IDs: ENSMUST00000055022.15, ENSMUST00000123257.7, ENSMUST00000128790.8, ENSMUST00000129979.7, ENSMUST00000150236.8, ENSMUST00000152585.8, ENSMUST00000153874.8, ENSMUST00000203185.3, ENSMUST00000203345.3, ENSMUST00000203648.3, ENSMUST00000203694.3, ENSMUST00000204765.3
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGCGCAGGCAGGTCCTaGAGACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: KLCAGVVGGRGAGRS*RLYALAPGHSVGLR Trigger: CCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGCACACAGTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | TCCCTTGCACAGCTCAGGGCTCTCCTGCATGCCAGGCCCTACCCCTaGCTATGCCTTGGCCATGCCCACCCACCTAACTCCAAGGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLAQLRALLHARPYP*LCLGHAHPPNSKGS Trigger: GCTGCCCTTGGAGTTAGGTGGGTGGGCATGGCCAAGGCATAGGCAGGGGTAGGGCCTGGCATGCAGGAGAGCCCTGAGCTGTGCAAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | ACTGAAGCCTCTCCTGGCTTTCCCTTGCACAGCTCAGGGCTCTCCTaGATGCCAGGCCCTACCCCTGCCTATGCCTTGGCCATGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: TEASPGFPLHSSGLS*MPGPTPAYALAMPT Trigger: GGTGGGCATGGCCAAGGCATAGGCAGGGGTAGGGCCTGGCATGCAGGAGAGCCCTGAGCTGTGCAAGGGAAAGCCAGGAGAGGCTTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | TCCTGTCCCTGCATCCTGGCCTCGGACACTCCCCACCTGCACCTATaGACCAGCTCACTGTGGTCCCTCAGGGTCCCTTCCAGGCACACA | + |
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Preference number: 1 (lower is better) Translates to: SCPCILASDTPHLHL*TSSLWSLRVPSRHT Trigger: TGTGTGCCTGGAAGGGACCCTGAGGGACCACAGTGAGCTGGTGCATAGGTGCAGGTGGGGAGTGTCCGAGGCCAGGATGCAGGGACAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | GCCCATGTCTACCGCCCAGCCCCGACAGGACAGCAAACCCCTGCCTaGACGCCACCAGATCATACTGCAGCTAGTCCTGTCCCTGCATCC | + |
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Preference number: 1 (lower is better) Translates to: AHVYRPAPTGQQTPA*TPPDHTAASPVPAS Trigger: GGATGCAGGGACAGGACTAGCTGCAGTATGATCTGGTGGCGTGCAGGCAGGGGTTTGCTGTCCTGTCGGGGCTGGGCGGTAGACATGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | GAGGTCAGCTCAGTCCTACCACTGAAGCCTCTCCTGGCTTTCCCTTaGACAGCTCAGGGCTCTCCTGCATGCCAGGCCCTACCCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: EVSSVLPLKPLLAFP*TAQGSPACQALPLP Trigger: AGGCAGGGGTAGGGCCTGGCATGCAGGAGAGCCCTGAGCTGTGCAAGGGAAAGCCAGGAGAGGCTTCAGTGGTAGGACTGAGCTGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | GTGCCCTCTGCACACCCACCTCCACTGCCACGCACACACAGAAGGTaGAGGTGCCGCCACATTAGCATGCAGAGGCCTGGCCATCACTCA | + |
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Preference number: 1 (lower is better) Translates to: VPSAHPPPLPRTHRR*RCRHISMQRPGHHS Trigger: TGAGTGATGGCCAGGCCTCTGCATGCTAATGTGGCGGCACCTGCACCTTCTGTGTGTGCGTGGCAGTGGAGGTGGGTGTGCAGAGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | AGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTaGGAAGGCTGCGGTCCCACACTAGAGCACAGGAGGCAAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RTSCWAGRTPAGTEC*EGCGPTLEHRRQRR Trigger: CCTCCTTTGCCTCCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR GCA 90 bp | ACAGAGCATCTACGCAGATGCACTCACGTGCCGCTCTGTGCCCTCTaGACACCCACCTCCACTGCCACGCACACACAGAAGGTGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: TEHLRRCTHVPLCAL*TPTSTATHTQKVQV Trigger: CACCTGCACCTTCTGTGTGTGCGTGGCAGTGGAGGTGGGTGTGCAGAGGGCACAGAGCGGCACGTGAGTGCATCTGCGTAGATGCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | GCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: ALAPGHSVGLRQVHV*LFSLVHLAFVREKD Trigger: ATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | CTAAGTAGGCCACCCCAGCAGAGTCAAACTGTGTGCTGGAGTAGTTaGCGGCAGAGGCGCAGGCAGGTCCTGCAGACTCTATGCCCTCGC | + |
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Preference number: 1 (lower is better) Translates to: LSRPPQQSQTVCWSS*RQRRRQVLQTLCPR Trigger: GCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTGGGGTGGCCTACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR GCA 90 bp | CACACACACAGAGCATCTACGCAGATGCACTCACGTGCCGCTCTGTaGCCTCTGCACACCCACCTCCACTGCCACGCACACACAGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: HTHRASTQMHSRAAL*PLHTHLHCHAHTEG Trigger: ACCTTCTGTGTGTGCGTGGCAGTGGAGGTGGGTGTGCAGAGGGCACAGAGCGGCACGTGAGTGCATCTGCGTAGATGCTCTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | GAGTGTGGCCAGGATGCCTGCATACACGTAGAAACTCCTCCGTGCTaGGGGGCAAGGGTCATGGGTTCTGAACCACTCTACCCTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ECGQDACIHVETPPC*GARVMGSEPLYPPG Trigger: GCCTGGAGGGTAGAGTGGTTCAGAACCCATGACCCTTGCCCCCCAGCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR TCA 90 bp | CCTTCACCAACCCTGGCCAAGTGTGTCCCCCATGCCTGCAGCATATaGCTACCCACTACCCCTGAACCTGGTCACTGTCTTCAGGATAGC | + |
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Preference number: 1 (lower is better) Translates to: PSPTLAKCVPHACSI*LPTTPEPGHCLQDS Trigger: GCTATCCTGAAGACAGTGACCAGGTTCAGGGGTAGTGGGTAGTCATATGCTGCAGGCATGGGGGACACACTTGGCCAGGGTTGGTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | AACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCTGCAGAGATAGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: NSSVRAGIHAPSVGS*GELPPVSRPAEIGV Trigger: CACCCCTATCTCTGCAGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 |
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| 3UTR CCA 90 bp | GCAGGTACTCACAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCTGCAGAGATAGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: AGTHRAGIHAPSVGS*GELPPVSRPAEIGV Trigger: CACCCCTATCTCTGCAGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTGTGAGTACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CCA 90 bp | AACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCAGGAAGAAAAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: NSSVRAGIHAPSVGS*GELPPVSRPGRKSK Trigger: CTTGCTTTTTCTTCCTGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152585.8 |
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| 3UTR CCA 90 bp | GCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTaGGTTCAGAGCTGGGGAGAGTGCATAGAGAAGCCATGTTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: ALQPRPLGICKRKGS*VQSWGECIEKPCCQ Trigger: CTGACAACATGGCTTCTCTATGCACTCTCCCCAGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR CAA 90 bp | AGCTCAGGGCTCTCCTGCATGCCAGGCCCTACCCCTGCCTATGCCTaGGCCATGCCCACCCACCTAACTCCAAGGGCAGCTCAGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSGLSCMPGPTPAYA*AMPTHLTPRAAQTL Trigger: CAGGGTCTGAGCTGCCCTTGGAGTTAGGTGGGTGGGCATGGCCAAGGCATAGGCAGGGGTAGGGCCTGGCATGCAGGAGAGCCCTGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALAPGHSVGLRQVHVWLFVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...GAAGAGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAGTCAAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGCGCAGGCAGGTCAACCCTGCAGCAGGTTaGGTGTGGCCAGGATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QQSQTVCWSSWRQRRRQVNPAAG*VWPGCL Trigger: CAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTT...GACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAGTCAAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGCGCAGGCAGGTCCGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QQSQTVCWSSWRQRRRQVRQVHV*LFSLVH Trigger: GTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCG...GACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGGATGGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: AQSRALPKPCSRLSVARMAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...CATCCTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACGAGCCAGAACTGCCGGCCACCATGGCCATAGATGTTGAAATCCTCAGCCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: ADEPELPATMAIDVEILSPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...GCTGAGGATTTCAACATCTATGGCCATGGTGGCCGGCAGTTCTGGCTCGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACAGATCAGGAAGAGGCTaGGGGTGCAGGCACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: AKRSRAMEEGQVAGQAGHRSGRG*GCRHTC Trigger: GCAGGTGTGCCTGCACCCCCAGCCTCTTCCTGATCT...GTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGATCAGGAAGAGGCTaGGGGTGCAGGCACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PRGREQWKKDKLLGRQDTRSGRG*GCRHTC Trigger: GCAGGTGTGCCTGCACCCCCAGCCTCTTCCTGATCT...GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCACGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EVESNGRRTSCWAGRTPARQVHV*LFSLVH Trigger: GTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCG...TGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
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| 3UTR CAA 90 bp | CCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTaGATGCTGCCCGTGTGGCAGGGCATGGAGGCAATGTCATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: PTQALMAFQRSLSVL*MLPVWQGMEAMSSK Trigger: CTTAGATGACATTGCCTCCATGCCCTGCCACACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGAAAGATGGGAGTCAGGGTACAGGATCTCCAAGGTCCCCTGGGTGACTCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SAERWESGYRISKVPWVTPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...AGTCACCCAGGGGACCTTGGAGATCCTGTACCCTGACTCCCATCTTTCAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203694.3 |
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| 3UTR-3UTR TCA 90 bp | GATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: DVSAEQSTPQTLQQVECGRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...GCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGCCACCCCAGCAGAGTCAAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGGGAGGCAAAGGAGGATaGGGGTGGAGATCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRPPQQSQTVCWSSWRQRGGKGG*GWRSGR Trigger: TCTTCCTGATCTCCACCCCCATCCTCCTTTGCCTCC...CCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTGGGGTGGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGCTACTTCACCTGCCCCCAGGGAGCACGCCAGACCTCACCAGGAAGAAACCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AKLLHLPPGSTPDLTRKKPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...TTTCTTCCTGGTGAGGTCTGGCGTGCTCCCTGGGGGCAGGTGAAGTAGCTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR TCA 90 bp | TACTTCACCTGCCCCCAGGGAGCACGCCAGACCTCACCAGGAAGAAAAAGCAAGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YFTCPQGARQTSPGRKSKDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CTTGCTTTTTCTTCCTGGTGAGGTCTGGCGTGCTCCCTGGGGGCAGGTGAAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123257.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCGGAAGAAGGACAAGTTaGTGGGCAGGCAGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: PRGREQWKKDKLLGRQDTGRRTS*WAGRTP Trigger: TGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCC...GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGCTACTTCACCTGCCCCCAGGGAGCACGCCAGACCTCACCAGGAAGAAATGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
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Preference number: 2 (lower is better) Translates to: AKLLHLPPGSTPDLTRKKCGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...TTTCTTCCTGGTGAGGTCTGGCGTGCTCCCTGGGGGCAGGTGAAGTAGCTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGAGGAGGCAAAGGAGGATaGGGGTGGAGATCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VAKRSRAMEEGQVAGQAGGGKGG*GWRSGR Trigger: TCTTCCTGATCTCCACCCCCATCCTCCTTTGCCTCC...TCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGAAGGACAAGTTGCTaGGCAGGCAGGACACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGREQWKKDKLLGRQDTSRRTSC*AGRTPA Trigger: TGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCT...GCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| 3UTR CAA 90 bp | GTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCAGCCTCGTCCACTaGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGLRQVHVWLFSLVH*AFVREKDLGFRAGE Trigger: CTCCCCAGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| 3UTR-3UTR GCA 90 bp | GATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
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Preference number: 2 (lower is better) Translates to: DVSAEQSTPQTLQQVECGCGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...GCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000152585.8 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | CTACTTCACCTGCCCCCAGGGAGCACGCCAGACCTCACCAGGAAGAAAAAGCAACCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLHLPPGSTPDLTRKKKQPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...TTGCTTTTTCTTCCTGGTGAGGTCTGGCGTGCTCCCTGGGGGCAGGTGAAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAAGATGGGAGTCAGGGTACAGGATCTCCAAGGTCCCCTGGGTGACTGAGCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AERWESGYRISKVPWVTEPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...CTCAGTCACCCAGGGGACCTTGGAGATCCTGTACCCTGACTCCCATCTTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCCACTCAGGCATTCCGTGTGGCAGGGCATaGAGGCAATGTCATCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: VPICLYRPPRGLGAHSGIPCGRA*RQCHLS Trigger: ACTTAGATGACATTGCCTCCATGCCCTGCCACACGG...AATGCCTGAGTGGGCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACTACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: AKRSRAMEEGQVAGQAGHYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...GTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CAA 90 bp | AGCTCAATGGCCAGCAGGAAGAAGCGGGTGATTTCCCACAGGATCTaGTCAGCAACTGTCGCAGCATCAGAGGCGCTGACTGTCATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSMASRKKRVISHRI*SATVAASEALTVIE Trigger: TTCTATGACAGTCAGCGCCTCTGATGCTGCGACAGTTGCTGACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGCTGGCCATTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATGATCACACTCAGCTCAATGGCCAGCAGGAAGAAGCGGGTGATTTCCCAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QDDHTQLNGQQEEAGDFPAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...TGGGAAATCACCCGCTTCTTCCTGCTGGCCATTGAGCTGAGTGTGATCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| 3UTR CAA 90 bp | GTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCAGCCTCGTCCACTaGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VGLRQVHVWLFSLVH*AFVREKDLGFRAKE Trigger: TTCTTTGGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| 3UTR-3UTR TCA 90 bp | AGAGACAATACTGTGGTGATAGCCAGCACCCGCTTGATGCTGGACTTGCTCTCTAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: RDNTVVIASTRLMLDLLSRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTATCACCACAGTATTGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGACCAAAGGCAAGACCCAGGATGATCACACTCAGCTCAATGGCCAGCAGGAATACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: VTKGKTQDDHTQLNGQQEYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...TTCCTGCTGGCCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCTTTGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGGAAGAAGCGGGTGATTTCCCACAGGATCTTGTCAGCAACTGTCGCAGCATACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: SRKKRVISHRILSATVAAYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...TGCTGCGACAGTTGCTGACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGCTGTTGATGCTGCCCGTGTGGCAGGGCATGGAGGCAATGTCATCTAAGGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLMLPVWQGMEAMSSKGHIDE*CKEAEV Trigger: TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCC...CTTAGATGACATTGCCTCCATGCCCTGCCACACGGGCAGCATCAACAGCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCCAAAGAAGCCACGGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HLAFVREKDLGFRAKEATVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...CGTGGCTTCTTTGGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LFSLVHLAFVREKDLGFRVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...TCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| 3UTR GCA 72 bp | GCTGGAGTAGTTGGCGGCAGAGGCGCAGGCAGGTCCTaGAGACTCTATGCCCTCGCGCCGGGCCACAGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: AGVVGGRGAGRS*RLYALAPGHSV Trigger: TACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| 3UTR TCA 72 bp | GGCAGCAGCCTGATACAGCCTCACCTAGGCTTCCCCTaGGACAGCCCATGTCTACCGCCCAGCCCCGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSLIQPHLGFP*DSPCLPPSPDR Trigger: CCTGTCGGGGCTGGGCGGTAGACATGGGCTGTCTCAGGGGAAGCCTAGGTGAGGCTGTATCAGGCTGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR GCA 72 bp | AGGGCTCTCCTGCATGCCAGGCCCTACCCCTGCCTATaGCTTGGCCATGCCCACCCACCTAACTCCAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RALLHARPYPCL*LGHAHPPNSKG Trigger: GCCCTTGGAGTTAGGTGGGTGGGCATGGCCAAGGCATAGGCAGGGGTAGGGCCTGGCATGCAGGAGAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | TGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTaGGAAGGCTGCGGTCCCACACTAGAGCACAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CWAGRTPAGTEC*EGCGPTLEHRR Trigger: CCTCCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| 3UTR GCA 72 bp | GGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTaGGGTCCCACACTAGAGCACAGGAGGCAAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRTPAGTECWEG*GPTLEHRRQRR Trigger: CCTCCTTTGCCTCCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| 3UTR GCA 72 bp | TGCATCCTGGCCTCGGACACTCCCCACCTGCACCTATaGACCAGCTCACTGTGGTCCCTCAGGGTCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CILASDTPHLHL*TSSLWSLRVPS Trigger: GGAAGGGACCCTGAGGGACCACAGTGAGCTGGTGCATAGGTGCAGGTGGGGAGTGTCCGAGGCCAGGATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACATGGAAGAAGGACAAGTaGCTGGGCAGGCAGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: WAGRTPAGTECWEGCGPTWKKDK*LGRQDT Trigger: GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCA...TGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| 3UTR GCA 72 bp | TACCGCCCAGCCCCGACAGGACAGCAAACCCCTGCCTaGACGCCACCAGATCATACTGCAGCTAGTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: YRPAPTGQQTPA*TPPDHTAASPV Trigger: GACAGGACTAGCTGCAGTATGATCTGGTGGCGTGCAGGCAGGGGTTTGCTGTCCTGTCGGGGCTGGGCGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | GACACTCCCCACCTGCACCTATGCACCAGCTCACTGTaGTCCCTCAGGGTCCCTTCCAGGCACACACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTPHLHLCTSSL*SLRVPSRHTLR Trigger: CCTGAGTGTGTGCCTGGAAGGGACCCTGAGGGACCACAGTGAGCTGGTGCATAGGTGCAGGTGGGGAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGGATGAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AQSRALPKPCSRLSVARMKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...CATCCTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000152585.8 ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | CTAAGTAGGCCACCCCAGCAGAGTCAAACTGTGTGCTaGAGTAGTTGGCGGCAGAGGCGCAGGCAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSRPPQQSQTVC*SSWRQRRRQVL Trigger: CAGGACCTGCCTGCGCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTGGGGTGGCCTACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | TTTGCTCTGAAGCTGGTCCCACCTACTCCTGAGAGCTaGGGCAGGACCATGGGTGTGTCAGCCCCTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FALKLVPPTPES*GRTMGVSAPCG Trigger: CCCACAAGGGGCTGACACACCCATGGTCCTGCCCCAGCTCTCAGGAGTAGGTGGGACCAGCTTCAGAGCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGGATGATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AQSRALPKPCSRLSVARMIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...CATCCTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCCGCCACATTAGCATGCAGAGGCCTGGCCATCACTCACCCAAAGAAGCCTGGAAGAAGGACAAGTaGCTGGGCAGGCAGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: RCRHISMQRPGHHSPKEAWKKDK*LGRQDT Trigger: GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCA...GGCTTCTTTGGGTGAGTGATGGCCAGGCCTCTGCATGCTAATGTGGCGGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCCGTAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGIDGFPALAVCAVDAARKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...ACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTGCACGCCACCAGATCATACTGCAGCTAGTCCTGTCCCTGCATCCTGGACCCTGATGAGTCCTTaGTGGGCAAAGCCTAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PACTPPDHTAASPVPASWTLMSP*WAKPKD Trigger: GTCCTTAGGCTTTGCCCACAAAGGACTCATCAGGGT...CCAGGATGCAGGGACAGGACTAGCTGCAGTATGATCTGGTGGCGTGCAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR TCA 72 bp | GCACGCCAGACCTCACCAGGAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGCCACCATGGCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARQTSPGRKSKS*RARTAGHHGHR Trigger: TCTATGGCCATGGTGGCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCTTCCTGGTGAGGTCTGGCGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
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| 3UTR GCA 72 bp | GTGCTTGCTGACACACTAGGTAAGGTGTGTGTGCACTaGCGAACTGCAGCCCTGACTCTGGGGTGTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VLADTLGKVCVH*RTAALTLGCAP Trigger: AGGTGCACACCCCAGAGTCAGGGCTGCAGTTCGGCAGTGCACACACACCTTACCTAGTGTGTCAGCAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR GCA 72 bp | TCAGGGTCCCTTCCAGGCACACACTCAGGCCTGCTTTaGTCCCCTGCTGTCTGTACAGTAGCTCACAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGSLPGTHSGLL*SPAVCTVAHSR Trigger: CCTACTGTGAGCTACTGTACAGACAGCAGGGGAGCAAAGCAGGCCTGAGTGTGTGCCTGGAAGGGACCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | CAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTaGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QEVESNGRRTSC*AGRTPAGTECW Trigger: CCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGCCCACTCAGGCATaGATGGCTTTCCAGCGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: TMMLAQSRALPKPCSRLSVPTQA*MAFQRS Trigger: CGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCAC...ACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | GTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRAGIHAPSVGS*GELPPVSRPAE Trigger: CTCTGCAGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 |
||
| 3UTR CCA 72 bp | CACAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HRAGIHAPSVGS*GELPPVSRPAE Trigger: CTCTGCAGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | CAGGATGCCTGCATACACGTAGAAACTCCTCCGTGCTaGGGGGCAAGGGTCATGGGTTCTGAACCACTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QDACIHVETPPC*GARVMGSEPLY Trigger: GTAGAGTGGTTCAGAACCCATGACCCTTGCCCCCCAGCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | GTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRAGIHAPSVGS*GELPPVSRPGR Trigger: TCTTCCTGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152585.8 |
||
| 3UTR CCA 72 bp | CTAGAAGAGGTTCAACAGAGCAGCAGCCTGTGCAGATaGAACAGGCAGCAGCCTGATACAGCCTCACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LEEVQQSSSLCR*NRQQPDTASPR Trigger: CCTAGGTGAGGCTGTATCAGGCTGCTGCCTGTTCCATCTGCACAGGCTGCTGCTCTGTTGAACCTCTTCTAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR TCA 72 bp | TCACACTCAGCTCAATGGCCAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGTCAGCAACTGTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHSAQWPAGRSG*FPTGSCQQLSQ Trigger: CTGCGACAGTTGCTGACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGCTGGCCATTGAGCTGAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| 3UTR TCA 72 bp | CGAGCCAGAACTGCCGGCCACCATGGCCATAGATGTTaGAATCCTCAGCTGAAAGATGGGAGTCAGGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: RARTAGHHGHRC*NPQLKDGSQGT Trigger: TGTACCCTGACTCCCATCTTTCAGCTGAGGATTTCAACATCTATGGCCATGGTGGCCGGCAGTTCTGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203345.3 |
||
| 3UTR CCA 72 bp | GCCAAAGAAGCCACGGAGGAAGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTACAGGAAGGTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AKEATEEGHIDE*CKEAEVQEGGG Trigger: GCCACCACCTTCCTGTACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTCTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| 3UTR CCA 72 bp | CCCAAAGAAGCCACGGAGGAAGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTACAGGAAGGTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PKEATEEGHIDE*CKEAEVQEGGG Trigger: GCCACCACCTTCCTGTACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTCTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| 3UTR TCA 72 bp | ACTTGCTCTCTAGGTGACCAAAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGGCCAGCAGGAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCSLGDQRQDPG*SHSAQWPAGRS Trigger: GCTTCTTCCTGCTGGCCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGGCCGGGCCAGGCCAAGCTACTTCACCTGCCCCCAGGGAGCACGCCAGAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGRARPSYFTCPQGARQKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...CTGGCGTGCTCCCTGGGGGCAGGTGAAGTAGCTTGGCCTGGCCCGGCCTCCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | CGGCAGAGGCGCAGGCAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRRRQVLQTLCPRAGPQKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...CTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCTCTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSCRLYALAPGHSVGLRDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | ACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TLCPRAGPQRRAAAGACLGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...CAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
||
| CDS-3UTR TCA 90 bp | CTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCAGCAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAPGHSVGLRQVHVWLFSRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...GCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGTCCTGCAGACTCTATaGCCTCGCGCCGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRVLQTL*PRAGPQ Trigger: CTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGAC...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACAGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WAGRTPAGTECWEGCGPTGCCGR*PRCASI Trigger: AATGGAAGCACAGCGTGGCCACCGCCCACAGCATCC...TGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCAGCCTCGTCCAGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GPQRRAAAGACLALQPRPGCCGR*PRCASI Trigger: AATGGAAGCACAGCGTGGCCACCGCCCACAGCATCC...TGGACGAGGCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR CCA 90 bp | CTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGCTCTTCAGCAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: LAPGHSVGLRQVHVWLFSSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...GCTGAAGAGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCATTGATGCTGCCCGTGTaGCAGGGCATGGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGHQQERSAGKAAVPLMLPV*QGMEAM Trigger: CATTGCCTCCATGCCCTGCCACACGGGCAGCATCAA...TGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| 3UTR CAA 72 bp | CTCTCCTGCATGCCAGGCCCTACCCCTGCCTATGCCTaGGCCATGCCCACCCACCTAACTCCAAGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCMPGPTPAYA*AMPTHLTPRAA Trigger: AGCTGCCCTTGGAGTTAGGTGGGTGGGCATGGCCAAGGCATAGGCAGGGGTAGGGCCTGGCATGCAGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| CDS-3UTR TCA 90 bp | CTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAGGTGCATGTCTGGCTGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCPRAGPQRRAAAGACLAVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...AGCCAGACATGCACCTGCCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150236.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCAAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGHQQERSAGKAAVPSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...TGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CGGCAGAGGCGCAGGCAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRRRQVLQTLCPRAGPQSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...CTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCTCTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGCGCTGTCTGTGCTGTTaGTGCTGCCCGTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQGYPHEFPSVFTGLPERCLCC*CCPCGR Trigger: CCTGCCACACGGGCAGCATCAACAGCACAGACAGCG...CTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCGCTGTCTGTGCTGTTaGTGCTGCCCGTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRAIHTSSHLSLQASPRRCLCC*CCPCGR Trigger: CCTGCCACACGGGCAGCATCAACAGCACAGACAGCG...CCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAGTCCTGCAGACTCTATaGCCTCGCGCCGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KKDKLLGRQDTSRNGVLGVLQTL*PRAGPQ Trigger: CTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGAC...TCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | GAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGCACAGGAGGCAAAGGAGGATGAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ECWEGCGPTLEHRRQRRMKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...CATCCTCCTTTGCCTCCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACAAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WAGRTPAGTECWEGCGPTRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...TGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGGCGCAGGCAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRRQVLQTLCPRAGPQRRVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...CCTACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCCTGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGCACAGGAGGCAAAGGAGGATGAACCCTGCAGCAGGTTaGGTGTGGCCAGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECWEGCGPTLEHRRQRRMNPAAG*VWPGCL Trigger: CAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTT...CATCCTCCTTTGCCTCCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | GGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGAACCCTGCAGCAGGTTaGGTGTGGCCAGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSCWAGRTPAGTECWNPAAG*VWPGCL Trigger: CAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTT...CCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR GCA 90 bp | GCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCATGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGHQQERSAGKAAVPCGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...TGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR GCA 90 bp | GCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACGTCCTGCAGACTCTATaGCCTCGCGCCGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKRSRAMEEGQVAGQAGHVLQTL*PRAGPQ Trigger: CTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGAC...GTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGATTGATGCTGCCCGTGTaGCAGGGCATGGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRLMLPV*QGMEAM Trigger: CATTGCCTCCATGCCCTGCCACACGGGCAGCATCAA...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAAGAGCACATTGGGAATaGGCAGCAGGAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRRAHWE*AAGGPS Trigger: ACTGGGACCTCCTGCTGCTCATTCCCAATGTGCTCT...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | AGAAACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTGGGGAAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNSSVRAGIHAPSVGSWGKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...TCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 |
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| CDS-3UTR TCA 90 bp | CGAGGCTTAGGTGCCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLGAHSGIDGFPALAVCKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...ACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCACCTAAGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRTPAGTECWEGCGPTLAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...TAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | TGCTGCCCGTGTGGCAGGGCATGGAGGCAATGTCATCTAAGTAGGCCACCCCAGGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: CCPCGRAWRQCHLSRPPQGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...CTGGGGTGGCCTACTTAGATGACATTGCCTCCATGCCCTGCCACACGGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
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| CDS-3UTR TCA 90 bp | AAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGACCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KKDKLLGRQDTSRNGVLGPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...TCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCAGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGHQQERSAGKAAVPVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...TGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | GGCAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCRLYALAPGHSVGLRHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...CCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | AGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGCGCTGTCTGTGCTGTTaGTGCTGCCCGTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAIHTSSHLSLQASPRLRRCLCC*CCPCGR Trigger: CCTGCCACACGGGCAGCATCAACAGCACAGACAGCG...CCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACAACATACCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: WAGRTPAGTECWEGCGPTTYLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGTATGT...TGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGCCACAGCCCTGGCAATaGCTACCAGGGCTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSCWAGRTPAGTECWPQPWQ*LPGLPQ Trigger: TTGTGGTAGCCCTGGTAGGCATTGCCAGGGCTGTGG...CCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
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| CDS-3UTR GCA 90 bp | GTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGCCACAGCCCTGGCAATaGCTACCAGGGCTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAEQSTPQTLQQVECGQPQPWQ*LPGLPQ Trigger: TTGTGGTAGCCCTGGTAGGCATTGCCAGGGCTGTGG...CTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000203345.3 |
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| CDS-3UTR GCA 90 bp | GTAGGCCACCCCAGCAGAGTCAAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGCCCACAGCCCTGGCAATaGCTACCAGGGCTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VGHPSRVKLCAGVVGGRGPQPWQ*LPGLPQ Trigger: TTGTGGTAGCCCTGGTAGGCATTGCCAGGGCTGTGG...GCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTGGGGTGGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
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| 3UTR CAA 72 bp | GCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTaGATGCTGCCCGTGTGGCAGGGCATGGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALMAFQRSLSVL*MLPVWQGMEAM Trigger: CATTGCCTCCATGCCCTGCCACACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACAAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQEVESNGRRTSCWAGRTKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...TGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GCTGACGAGCCAGAACTGCCGGCCACCATGGCCATAGATGTTGAAATCCTCAGCAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADEPELPATMAIDVEILSKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...GCTGAGGATTTCAACATCTATGGCCATGGTGGCCGGCAGTTCTGGCTCGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | ATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCCAAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHTSSHLSLQASPRLRCPKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...TGGGCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCGAGGCTTAGGTGCCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRGLGAHSGIDGFPALAAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...AGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCACCTAAGCCTCGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCGAGGCTTAGGTGCCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRGLGAHSGIDGFPALARQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...AGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCACCTAAGCCTCGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRAIHTSSHLSLQASPRDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTGGGGAGAATTACCACCAGTGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EGRDTRSFSGVLGRITTSGCCGR*PRCASI Trigger: AATGGAAGCACAGCGTGGCCACCGCCCACAGCATCC...ACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000152585.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAGATGGGAGTCAGGGTACAGGATCTCCAAGGTCCCCTGGGTGACTGAGGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: AERWESGYRISKVPWVTEGCCGR*PRCASI Trigger: AATGGAAGCACAGCGTGGCCACCGCCCACAGCATCC...CTCAGTCACCCAGGGGACCTTGGAGATCCTGTACCCTGACTCCCATCTTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGACCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGCGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAIHTSSHLSLQASPRLRRQVHV*LFSLVH Trigger: GTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCG...CCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCCGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NGRRTSCWAGRTPAGTECRQVHV*LFSLVH Trigger: GTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCG...GCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCGGCAGGTGCATGTCTaGCTCTTCAGCCTCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPRQVHV*LFSLVH Trigger: GTGGACGAGGCTGAAGAGCCAGACATGCACCTGCCG...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCCACAATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGAGCACATTGGGAATaGGCAGCAGGAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPTMMLAQSRALPKPCSRAHWE*AAGGPS Trigger: ACTGGGACCTCCTGCTGCTCATTCCCAATGTGCTCT...GCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATTGTGGGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTATCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGRTPAGTECWEGCGPTLSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...TAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRAIHTSSHLSLQASPRRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...CCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAEQSTPQTLQQVECGQRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...CTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: AKRSRAMEEGQVAGQAGHGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...GTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGGATGCCTGCATACACGTAGAAACTCCTCCGTGAGGGCAGGGATACACGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLHTRRNSSVRAGIHGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...GTGTATCCCTGCCCTCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | ATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCCAGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: IHTSSHLSLQASPRLRCPGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...TGGGCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TACACAGCAGAGCCCCACAATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YTAEPHNDVSAEQSTPQTPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...GGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATTGTGGGGCTCTGCTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGTGCCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTTCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGAHSGIDGFPALAVCAVPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...AACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCACCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRAMEEGQVAGQAGHQQEPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...TTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTPAQGYPHEFPSVFTGLRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...GAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQGYPHEFPSVFTGLPEVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...CTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGCACGCCAGACCTCACCAGGAAGAAAAAGCAAGAGCTGACGAGCCAGAACCCACAGCCCTGGCAATaGCTACCAGGGCTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GSTPDLTRKKKQELTSQNPQPWQ*LPGLPQ Trigger: TTGTGGTAGCCCTGGTAGGCATTGCCAGGGCTGTGG...GTTCTGGCTCGTCAGCTCTTGCTTTTTCTTCCTGGTGAGGTCTGGCGTGCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000203345.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCCACTCAGGCATCCACAGCCCTGGCAATaGCTACCAGGGCTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSHLSLQASPRLRCPLRHPQPWQ*LPGLPQ Trigger: TTGTGGTAGCCCTGGTAGGCATTGCCAGGGCTGTGG...ATGCCTGAGTGGGCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCCGTGTGGCAGGGCATaGAGGCAATGTCATCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRAIHTSSHLSLQASPRPCGRA*RQCHLS Trigger: ACTTAGATGACATTGCCTCCATGCCCTGCCACACGG...CCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTTTGATGCTGCCCGTGTaGCAGGGCATGGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPLMLPV*QGMEAM Trigger: CATTGCCTCCATGCCCTGCCACACGGGCAGCATCAA...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
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| CDS-3UTR CCA 90 bp | TTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCCGTGTGGCAGGGCATGGAGAGTACAGGAAGGTGGTaGCATCTACACAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQRSLSVLLMLPVWQGMESTGRW*HLHSRK Trigger: CTTCCTGCTGTGTAGATGCCACCACCTTCCTGTACT...CTCCATGCCCTGCCACACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150236.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGAGCACATTGGGAATaGGCAGCAGGAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGREQWKKDKLLGRQDTSRAHWE*AAGGPS Trigger: ACTGGGACCTCCTGCTGCTCATTCCCAATGTGCTCT...GCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCCGTAGAGCACATTGGGAATaGGCAGCAGGAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGIDGFPALAVCAVDAARRAHWE*AAGGPS Trigger: ACTGGGACCTCCTGCTGCTCATTCCCAATGTGCTCT...ACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTAGAGCACATTGGGAATaGGCAGCAGGAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPRAHWE*AAGGPS Trigger: ACTGGGACCTCCTGCTGCTCATTCCCAATGTGCTCT...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSAEQSTPQTLQQVECGAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...GCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GCATTGATGGCTTTCCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCCGTGTGGAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALMAFQRSLSVLLMLPVWRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...CCACACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGGAAAGCCATCAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACAGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQEVESNGRRTSCWAGRTDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...TGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MEEGQVAGQAGHQQERSADLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...AGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WAGRTPAGTECWEGCGPTHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...TGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAKRSRAMEEGQVAGQAGRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...TCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRGREQWKKDKLLGRQDTRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCACCACATACCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPHHIPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGTATGTGGTG...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAQGYPHEFPSVFTGLPECGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...CTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | ACACGTAGAAACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TRRNSSVRAGIHAPSVGSSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...AGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTTTCTACGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000152585.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTGGGGAGAATTACCACCAGTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: EGRDTRSFSGVLGRITTSSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...ACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000152585.8 |
||
| CDS-3UTR CCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: AMEEGQVAGQAGHQQERSSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...ACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: NGRRTSCWAGRTPAGTECSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...GCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| 3UTR CAA 72 bp | GCCAGCAGGAAGAAGCGGGTGATTTCCCACAGGATCTaGTCAGCAACTGTCGCAGCATCAGAGGCGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASRKKRVISHRI*SATVAASEALT Trigger: AGTCAGCGCCTCTGATGCTGCGACAGTTGCTGACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAQGYPHEFPSVFTGLPESRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...CTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVESNGRRTSCWAGRTPAAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...TGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NGRRTSCWAGRTPAGTECRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...GCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CTGCATACACGTAGAAACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTRRNSSVRAGIHAPSVDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTTTCTACGTGTATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | GCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGAAGTACAGGAACCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATEEGHIDEWCKEAEVQEPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...TTCCTGTACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCATACACGTAGAAACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHTRRNSSVRAGIHAPSRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...TGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTTTCTACGTGTATGCAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAIHTSSHLSLQASPRLRVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...CCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR GCA 90 bp | CGAGGCTTAGGTGCCCACTCAGGCATTGATGGCTTTCCAGCGCTCGCTGTCTGTTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGAHSGIDGFPALAVCCGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...ACAGACAGCGAGCGCTGGAAAGCCATCAATGCCTGAGTGGGCACCTAAGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| CDS-3UTR CCA 90 bp | AGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAIHTSSHLSLQASPRLRPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...CCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGTACAGGAAGGTGGTaGCATCTACACAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGREQWKKDKLLGRQDTSSTGRW*HLHSRA Trigger: GGCTCTGCTGTGTAGATGCCACCACCTTCCTGTACT...GCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGTACAGGAAGGTGGTaGCATCTACACAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGREQWKKDKLLGRQDTSTGRW*HLHSRA Trigger: GGCTCTGCTGTGTAGATGCCACCACCTTCCTGTACT...GGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCGTGTGGCAGGGCATaGAGGCAATGTCATCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPPCGRA*RQCHLS Trigger: ACTTAGATGACATTGCCTCCATGCCCTGCCACACGG...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCGTGTGGCAGGGCATaGAGGCAATGTCATCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQEVESNGRRTSCWAGRTPCGRA*RQCHLS Trigger: ACTTAGATGACATTGCCTCCATGCCCTGCCACACGG...TGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCCACAATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPTMMLAQSRALPKPCSSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...GCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATTGTGGGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGGATCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKDKLLGRQDTSRNGVLGSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...TCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTPAQGYPHEFPSVFTGLSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...GAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCCAAAGAAGCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RAKEATEEGHIDEWCKEAGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...AGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTCTTTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR GCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPCGQDA*IHVETP Trigger: AGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACA...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GGTGCATGTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGAGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GACLALQPRPLGICKRKGGCCGR*PRCASI Trigger: AATGGAAGCACAGCGTGGCCACCGCCCACAGCATCC...TCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR CCA 90 bp | AATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: NDVSAEQSTPQTLQQVECSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...ACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123257.7 ENSMUST00000128790.8 ENSMUST00000152585.8 ENSMUST00000203345.3 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCCCACAGGATCTTGTCAGCAACTGTCGCAGCATCAGAGGCGCTGACTAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: VISHRILSATVAASEALTSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...AGTCAGCGCCTCTGATGCTGCGACAGTTGCTGACAAGATCCTGTGGGAAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152585.8 ENSMUST00000203694.3 |
||
| CDS-3UTR CCA 90 bp | TCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAMEEGQVAGQAGHQQEPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...TTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTTACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTCPGLSTRVPICLYRPYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | CGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACTACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: REQWKKDKLLGRQDTSRNYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...GTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGCCACCCCAGCAGAGTCAAACTGTGTGCTGGAGTAGTTGGCGGCAGAGGCGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGHPSRVKLCAGVVGGRGGHIDE*CKEAEV Trigger: TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCC...GCCTCTGCCGCCAACTACTCCAGCACACAGTTTGACTCTGCTGGGGTGGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150236.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PAQGYPHEFPSVFTGLPEGHIDE*CKEAEV Trigger: TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCC...CTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGRRTSCWAGRTPAGTECSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...GCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCAAATGGGGCTGGAGGTaGCACGGATCTTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQPRPLGICKRKGSWVQSKWGWR*HGSWPE Trigger: CTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTT...GCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | AATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NDVSAEQSTPQTLQQVECRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...ACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128790.8 ENSMUST00000203345.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MEEGQVAGQAGHQQERSAVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...AGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGREQWKKDKLLGRQDTSVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...GCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TTACCACCAGTGAGTAGACCTGCAGAGATAGGGGTGACAGGGAGGCCGGGCCAGCATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPVSRPAEIGVTGRPGQHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...CTGGCCCGGCCTCCCTGTCACCCCTATCTCTGCAGGTCTACTCACTGGTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAAGAAGCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGAAGCAGGAAGAAGCGGGTaGTTTCCCACAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKEATEEGHIDEWCKEAEAGRSG*FPTGSC Trigger: ACAAGATCCTGTGGGAAATCACCCGCTTCTTCCTGC...TTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTCTTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTCCAAGGTCCCCTGGGTaGCTGAGTAGGCCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HVWLFSLVHLAFVREKDLPRSPG*LSRPET Trigger: TGTCTCTGGCCTACTCAGTCACCCAGGGGACCTTGG...AAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTAACCCTGCAGCAGGTTaGGTGTGGCCAGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVWLFSLVHLAFVREKDLNPAAG*VWPGCL Trigger: CAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTT...AAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: VWLFSLVHLAFVREKDLGSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...CCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR CCA 90 bp | ATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCCAGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHTSSHLSLQASPRLRCPGHIDE*CKEAEV Trigger: TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCC...TGGGCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGGCCACATAGATGAGTaGTGCAAAGAAGCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESNGRRTSCWAGRTPAGTGHIDE*CKEAEV Trigger: TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCC...CGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLALQPRPLGICKRKGSWDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | GATCAAGAAAATATATACACTGCAGCCTTGTGGCCAAGAGGTCGAGAGCAATGGGGTCCCCTGGGTGACTaGGTAGGCCAGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DQENIYTAALWPRGREQWGPLGD*VGQRQY Trigger: GTATTGTCTCTGGCCTACTCAGTCACCCAGGGGACC...CCATTGCTCTCGACCTCTTGGCCACAAGGCTGCAGTGTATATATTTTCTTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | AATGATGTTAGCGCAGAGCAGAGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NDVSAEQSTPQTLQQVECVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...ACACTCAACCTGCTGCAGGGTTTGGGGAGTGCTCTGCTCTGCGCTAACATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCACATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVESNGRRTSCWAGRTPAHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...TGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAKRSRAMEEGQVAGQAGHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...TCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | GCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTCCCCGAGGCTTAGGTGCCATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AIHTSSHLSLQASPRLRCHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...GCACCTAAGCCTCGGGGAGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGAAGTACAGTACACGCTCCTTCAGTaGGGTCTTGGGGAGAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: EATEEGHIDEWCKEAEVQYTLLQ*GLGENY Trigger: GTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTA...CTGTACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | GATCAAGAAAATATATACACTGCAGCCTTGTGGCCAAGAGGTCGAGAGCAATGGGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQENIYTAALWPRGREQWDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...CCATTGCTCTCGACCTCTTGGCCACAAGGCTGCAGTGTATATATTTTCTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGACTTGCTCTCTAGGTaGCCAAAGGCAAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLVHLAFVREKDLGFRDLLSR*PKARPR Trigger: CCTGGGTCTTGCCTTTGGTCACCTAGAGAGCAAGTC...TCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSLVHLAFVREKDLGFRRKSKS*RARTAG Trigger: GCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCT...TCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLVHLAFVREKDLGFRSSSRH*WGSLIL Trigger: CAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCT...TCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGAAGTACCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEATEEGHIDEWCKEAEVPSVGS*GELPPV Trigger: CACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGG...TACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | GTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTCCAGAGCAGGAAGATaGAGAAGAGCACATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWLFSLVHLAFVREKDLGSRAGR*RRAHWE Trigger: TTCCCAATGTGCTCTTCTTCATCTTCCTGCTCTGGA...CCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | CACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCCAAAGAAGCCACGAGGCAAGACCCAGGATaGTCACACTCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLAFVREKDLGFRAKEATRQDPG*SHSAQW Trigger: CCATTGAGCTGAGTGTGATCATCCTGGGTCTTGCCT...CGTGGCTTCTTTGGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | GATCAAGAAAATATATACACTGCAGCCTTGTGGCCAAGAGGTCGAGAGCAATGGGTGGTGCAAAGAAGCTaGAGTACAGGAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQENIYTAALWPRGREQWVVQRS*STGRWW Trigger: CCACCACCTTCCTGTACTTCAGCTTCTTTGCACCAC...CCATTGCTCTCGACCTCTTGGCCACAAGGCTGCAGTGTATATATTTTCTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CCA 90 bp | GATCAAGAAAATATATACACTGCAGCCTTGTGGCCAAGAGGTCGAGAGCAATGGAGTACAGGAAGGTGGTaGCATCTACACAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DQENIYTAALWPRGREQWSTGRW*HLHSRA Trigger: GGCTCTGCTGTGTAGATGCCACCACCTTCCTGTACT...CCATTGCTCTCGACCTCTTGGCCACAAGGCTGCAGTGTATATATTTTCTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGCTCTTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTGAAATCCTCAGCTaGAAGATGGGAGTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLALQPRPLGICKRKGSWVEILS*KMGVRV Trigger: TACCCTGACTCCCATCTTTCAGCTGAGGATTTCAAC...CCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAAGAGCCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203648.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCACGGAGGAAGGCCACATAGATGAGTGGTGCAAAGAAGCTGAAGTACAGCATGGCCATAGATGTTaGAATCCTCAGCTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EATEEGHIDEWCKEAEVQHGHRC*NPQLKD Trigger: ATCTTTCAGCTGAGGATTTCAACATCTATGGCCATG...CTGTACTTCAGCTTCTTTGCACCACTCATCTATGTGGCCTTCCTCCGTGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS-3UTR GCA 90 bp | CGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCCAAAGAAGCGTAGAAACTCCTCCGTaGAGGAAGAAAAAGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLGICKRKGSWVQSQRSVETPP*RKKKQE Trigger: CTCTTGCTTTTTCTTCCTGCACGGAGGAGTTTCTAC...GCTTCTTTGGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCTGCAGACTCTATGCCCTCGCGCCGGGCCACAGCGTAGGGCTGCGGCAATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QVLQTLCPRAGPQRRAAAIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...TGCCGCAGCCCTACGCTGTGGCCCGGCGCGAGGGCATAGAGTCTGCAGGACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000203345.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCGCTCGCTGTCTGTGCTGTTGATGCTGCCCGTGTGGCAGGGCATGGAGGCAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PALAVCAVDAARVAGHGGKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...GCCTCCATGCCCTGCCACACGGGCAGCATCAACAGCACAGACAGCGAGCGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| CDS-3UTR CAA 90 bp | ACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAGCACAGGTCGCTGTCTGTGCTGTaGATGCTGCCCGTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPAGTECWEGCGPTLEHRSLSVL*MLPVWQ Trigger: CTGCCACACGGGCAGCATCAACAGCACAGACAGCGA...CCTGTGCTCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGACACCAGCAGGAACGGAGTGCTGGGAAGGCTGCGGTCCCACACTAGAAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQDTSRNGVLGRLRSHTRKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...TCTAGTGTGGGACCGCAGCCTTCCCAGCACTCCGTTCCTGCTGGTGTCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS CCA 90 bp | CGGACCCTGGAGGAGCCAATATCCTCATATAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTGGATGCTGTGGGCGGTGGCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTLEEPISSYSSSRH*WGSLILDAVGGGHA Trigger: AGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATATTGGCTCCTCCAGGGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTGCTGGAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRTSCWAGRTPAGTECWKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...CCAGCACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS CCA 90 bp | ACCCTGGAGGAGCCAATATCCTCATATAGCAGCAGCAGGCACTGGTaGGGCTCACTGATATTGGATGCTGTGGGCGGTGGCCACGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLEEPISSYSSSRHW*GSLILDAVGGGHAV Trigger: CACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATATTGGCTCCTCCAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000204765.3 |
||
| CDS CCA 90 bp | GGGAAGCTGGAGGAGCCAATATCCTCATATAGCAGCAGCAGGCACTaGTGGGGCTCACTGATATTGGATGCTGTGGGCGGTGGCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKLEEPISSYSSSRH*WGSLILDAVGGGHA Trigger: AGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATATTGGCTCCTCCAGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123257.7 ENSMUST00000152585.8 |
||
| CDS-3UTR CAA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTTCGCTGTCTGTGCTGTaGATGCTGCCCGTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHTCPGLSTRVPICLYRPSLSVL*MLPVWQ Trigger: CTGCCACACGGGCAGCATCAACAGCACAGACAGCGA...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055022.15 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS CCA 90 bp | AAGCTGGAGGAGCCAATATCCTCATATAGCAGCAGCAGGCACTGGTaGGGCTCACTGATATTGGATGCTGTGGGCGGTGGCCACGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLEEPISSYSSSRHW*GSLILDAVGGGHAV Trigger: CACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATATTGGCTCCTCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152585.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACCAGCAGGAACGGAGTAAACCCTGCAGCAGGTaGAGTGTGGCCAGGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AMEEGQVAGQAGHQQERSKPCSR*SVARMP Trigger: AGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTT...ACTCCGTTCCTGCTGGTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000204765.3 |
||
| CDS TCA 90 bp | AGCCAATATCCTCATATAGCAGCAGCAGGCACTGGTGGGGCTCACTaGTATTGGATGCTGTGGGCGGTGGCCACGCTGTGCTTCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQYPHIAAAGTGGAH*YWMLWAVATLCFHW Trigger: CCAATGGAAGCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATATTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CAA 90 bp | AGGCACACCTGCCCAGGGCTATCCACACGAGTTCCCATCTGTCTTTACAGGCCTATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHTCPGLSTRVPICLYRPIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...AGGCCTGTAAAGACAGATGGGAACTCGTGTGGATAGCCCTGGGCAGGTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CAA 90 bp | GCCAAGAGGTCGAGAGCAATGGAAGAAGGACAAGTTGCTGGGCAGGCAGGACACATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKRSRAMEEGQVAGQAGHIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...GTGTCCTGCCTGCCCAGCAACTTGTCCTTCTTCCATTGCTCTCGACCTCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055022.15 ENSMUST00000129979.7 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000204765.3 |
||
| CDS-3UTR CAA 90 bp | CTGCATACACGTAGAAACTCCTCCGTGAGGGCAGGGATACACGCTCCTTCAGTGATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTRRNSSVRAGIHAPSVIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...CACTGAAGGAGCGTGTATCCCTGCCCTCACGGAGGAGTTTCTACGTGTATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128790.8 |
||
| CDS TCA 90 bp | AGAAATGTGACCCTCGACCCTACCACCACCACATACCTGGGTGACTaGGTAGGCCAGAGACAATACTGTGGTGATAGCCAGCACCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNVTLDPTTTTYLGD*VGQRQYCGDSQHPL Trigger: AAGCGGGTGCTGGCTATCACCACAGTATTGTCTCTGGCCTACTCAGTCACCCAGGTATGTGGTGGTGGTAGGGTCGAGGGTCACATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
||
| CDS GCA 90 bp | AGCACTCCCCAAACCCTGCAGCAGGTTGAGTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCTCCGTGCAGGAAGAAAAAGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STPQTLQQVECGQDA*IHVETPPCRKKKQE Trigger: CTCTTGCTTTTTCTTCCTGCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTTGGGGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCTCGTCCACTTGGCATTTGTAAGAGAAAAGGATCTTGGGTTCAGAGCCATAGCCAGCACCCGCTaGATGCTGGACTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLVHLAFVREKDLGFRAIASTR*MLDLLS Trigger: AGAGAGCAAGTCCAGCATCAAGCGGGTGCTGGCTAT...GGCTCTGAACCCAAGATCCTTTTCTCTTACAAATGCCAAGTGGACGAGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129979.7 ENSMUST00000203648.3 |
||
| CDS GCA 72 bp | CAGCAGCAGGCACTGGTGGGGCTCACTGATATTGGATaGTGTGGGCGGTGGCCACGCTGTGCTTCCATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QQQALVGLTDIG*CGRWPRCASIG Trigger: GCCAATGGAAGCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
||
| CDS CCA 72 bp | CTGGTGGGGCTCACTGATATTGGATGCTGTGGGCGGTaGCCACGCTGTGCTTCCATTGGCCTCCTGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVGLTDIGCCGR*PRCASIGLLQA Trigger: AGCCTGCAGGAGGCCAATGGAAGCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
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| CDS TCA 72 bp | CCTCATATAGCAGCAGCAGGCACTGGTGGGGCTCACTaGTATTGGATGCTGTGGGCGGTGGCCACGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PHIAAAGTGGAH*YWMLWAVATLC Trigger: GCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
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| CDS CAA 72 bp | TATAGCAGCAGCAGGCACTGGTGGGGCTCACTGATATaGGATGCTGTGGGCGGTGGCCACGCTGTGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: YSSSRHWWGSLI*DAVGGGHAVLP Trigger: TGGAAGCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
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| CDS CAA 90 bp | ATATCCTCATATAGCAGCAGCAGGCACTGGTGGGGCTCACTGATATaGGATGCTGTGGGCGGTGGCCACGCTGTGCTTCCATTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISSYSSSRHWWGSLI*DAVGGGHAVLPLAS Trigger: GGAGGCCAATGGAAGCACAGCGTGGCCACCGCCCACAGCATCCAATATCAGTGAGCCCCACCAGTGCCTGCTGCTGCTATATGAGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000152585.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000203694.3 ENSMUST00000204765.3 |
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| CDS TCA 72 bp | GGTGGCATCTACACAGCAGGAAGAAAAAGCAAGAGCTaGCGAGCCAGAACTGCCGGCCACCATGGCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: GGIYTAGRKSKS*RARTAGHHGHR Trigger: TCTATGGCCATGGTGGCCGGCAGTTCTGGCTCGTCAGCTCTTGCTTTTTCTTCCTGCTGTGTAGATGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150236.8 |
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| CDS CCA 72 bp | CAGAGGGCAGGGATACACGCTCCTTCAGTGGGGTCTTaGGGAGAATTACCACCAGTGAGTAGACCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QRAGIHAPSVGS*GELPPVSRPGR Trigger: TCTTCCTGGTCTACTCACTGGTGGTAATTCTCCCCAAGACCCCACTGAAGGAGCGTGTATCCCTGCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203648.3 |
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| CDS GCA 72 bp | GGCCAGGATGCCTGCATACACGTAGAAACTCCTCCGTaGAGGAAGAAAAAGCAAGAGCTGACGAGCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GQDACIHVETPP*RKKKQELTSQN Trigger: GTTCTGGCTCGTCAGCTCTTGCTTTTTCTTCCTGCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
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| CDS GCA 72 bp | CAAACCCTGCAGCAGGTTGAGTGTGGCCAGGATGCCTaGATACACGTAGAAACTCCTCCGTGCAGGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QTLQQVECGQDA*IHVETPPCRKK Trigger: TTTCTTCCTGCACGGAGGAGTTTCTACGTGTATGCAGGCATCCTGGCCACACTCAACCTGCTGCAGGGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129979.7 |
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| CDS CAA 72 bp | AAGGTGATAAAAATGGGGCTGGAGGTGACACGGATCTaGGCCCGAGCTAAGGGAAGCTTCCAGAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KVIKMGLEVTRI*ARAKGSFQSRK Trigger: CTTCCTGCTCTGGAAGCTTCCCTTAGCTCGGGCCAAGATCCGTGTCACCTCCAGCCCCATTTTTATCACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000055022.15 ENSMUST00000128790.8 ENSMUST00000129979.7 ENSMUST00000150236.8 ENSMUST00000153874.8 ENSMUST00000203185.3 ENSMUST00000203345.3 ENSMUST00000203648.3 ENSMUST00000204765.3 |
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| CDS TCA 72 bp | CCATGTGACTCCTTAGGAACACATAGTTTAGAAATGTaGCCCTCGACCCTACCACCACCACATACCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PCDSLGTHSLEM*PSTLPPPHTWV Trigger: CACCCAGGTATGTGGTGGTGGTAGGGTCGAGGGTCACATTTCTAAACTATGTGTTCCTAAGGAGTCACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203345.3 |
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