Pregenerated sensors for TPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006005Ensembl transcript IDs: ENSMUST00000119161.9, ENSMUST00000124484.2, ENSMUST00000124973.9, ENSMUST00000151563.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTGGCTGTTGGTGGGTCTaGTGTGCTGGCAATTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVGCWWV*CAGNSS Trigger: AGAGGAATTGCCAGCACATCAGACCCACCAACAGCC...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTTATCCTGGAGGTCCTaGCGAAGGCGTGACAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVLSWRS*RRRDSS Trigger: TGAACTGTCACGCCTTCGTCAGGACCTCCAGGATAA...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATCAAGGTGTCGCTCTTaGTGCTCTCTGAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSSRCRS*CSLSSL Trigger: GAGAGAGCTCAGAGAGCATCAAGAGCGACACCTTGA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATGCGGGTGGCTCTGTTaGGTGGGTTGTACAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSCGWLC*VGCTKA Trigger: AGCTTTTGTACAACCCACTCAACAGAGCCACCCGCA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTCGGATTTGTGACCGTTaGAGGTGTAACCATTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVRICDR*RCNHWA Trigger: CGCCCAATGGTTACACCTGCAACGGTCACAAATCCG...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTCCTGCTTCCATGGTaGTGTCCTCTTCCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVLLLPW*CPLPPP Trigger: GGGAGGAGGAAGAGGACAGCACCATGGAAGCAGGAG...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAGGAGCTGCTCCTCTGTaGTTTTATCCTGGAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSGAAPL*FYPGGP Trigger: AGGACCTCCAGGATAAAACCACAGAGGAGCAGCTCC...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGTCCTGACGAAGGCGTaGCAGTTCAGACTGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVVLTKA*QFRLKL Trigger: CAGCTTCAGTCTGAACTGTCACGCCTTCGTCAGGAC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTCAACAGGAGTTGGCTTaGTATTGGCTGTTGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVQQELA*YWLLVG Trigger: ACCCACCAACAGCCAATATCAAGCCAACTCCTGTTG...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCACATTGGGCGGATACTTaGCCTGGGTGTCGACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSHWADT*PGCRLI Trigger: AATAAGTCGACACCCAGGGCAAGTATCCGCCCAATG...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTCTCCTGAAGACTGAGTaGAAGTCTCCATGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVLLKTE*KSPWPC Trigger: ACAAGGCCATGGAGACTTCCACTCAGTCTTCAGGAG...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAAGCTCCTGCATTTCCTaGACAGAGATGTGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSSSCIS*TEMCCS Trigger: GGAACAGCACATCTCTGTCCAGGAAATGCAGGAGCT...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTGCAGGTGTAACCATTaGGCGGATACTTGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVCRCNH*ADTCPG Trigger: CCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTATTTGCTGTCGGAGCTaGTCCTCTGTGGTTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVICCRS*SSVVLS Trigger: GGATAAAACCACAGAGGAGCAGCTCCGACAGCAAAT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAATTCCCAGCCATAGCTaGAGCTGTCACTTTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSIPSHS*SCHFTW Trigger: CCAAGTAAAGTGACAGCTGCAGCTATGGCTGGGAAT...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTACAGGCCCTTCTGACTaGATAGCTTCCTGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVTGPSD*IASCDS Trigger: GGAGTCACAGGAAGCTATGCAGTCAGAAGGGCCTGT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAGAGTGGAAGTCTCCATaGCCTTGTTTTGTTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSEWKSP*PCFVAL Trigger: AAGCGCAACAAAACAAGGCCATGGAGACTTCCACTC...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTGCTGTGGAAGTAGATaGACGCTCCACTGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVCCGSR*TLHWGT Trigger: AGTTCCCCAGTGGAGCGTCCATCTACTTCCACAGCA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGGAACTTGGGGTAGCTaGAACAGTGCCAAATACTGC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVGTWGS*NSAKYC Trigger: GCAGTATTTGGCACTGTTTCAGCTACCCCAAGTTCC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTGTCTTTTCATTCATTTaGTGTCGGAGCTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVVFSFI*CRSCSS Trigger: AGAGGAGCAGCTCCGACAGCAAATGAATGAAAAGAC...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTAACAGTGCCAAATACTaGTGTGGAAGTAGATGGACG | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVNSAKY*CGSRWT Trigger: CGTCCATCTACTTCCACAGCAGTATTTGGCACTGTT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGTGGGTCTGATGTGCTaGCAATTCCTCTTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVVGLMC*QFLFHQ Trigger: CTGGTGAAAGAGGAATTGCCAGCACATCAGACCCAC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTACTTGACCCTCAAGTaGCTTTGTCTTTGTTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVYLTLK*LCLCFG Trigger: TCCGAAACAAAGACAAAGTCACTTGAGGGTCAAGTA...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTAGCTCATCTTTCTGCTaGTCTAGAGCTCCGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVSSSFC*SRAPFL Trigger: AAGGAACGGAGCTCTAGATCAGCAGAAAGATGAGCT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTGAGTGGTTTTCAGTGTaGTTTGTCTTTGCTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVEWFSV*FVFAVL Trigger: CAGAACAGCAAAGACAAATCACACTGAAAACCACTC...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTTTGGGGACAATTCTTaGTTTGTAGGCTCAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVFGDNS*FVGSIC Trigger: GCAGATTGAGCCTACAAATCAAGAATTGTCCCCAAA...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTATAGGCTTGAGTTTCTaGCTCTCCATCAGTACTTTC | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVIGLSF*LSISTF Trigger: GAAAGTACTGATGGAGAGGCAGAAACTCAAGCCTAT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATTACATCATCTCCTTTaGCTTGACCATCTTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSLHHLL*LDHLER Trigger: CCTCTCAAGATGGTCAAGGCAAAGGAGATGATGTAA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTATCCGACCTTCATACTaGGACTTAAGAGCAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVIRPSY*DLRAVI Trigger: AATGACTGCTCTTAAGTCCCAGTATGAAGGTCGGAT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCTTTCACCAGAAGCTaGAGTGGTTTTCAGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVSFTRS*SGFQCD Trigger: ATCACACTGAAAACCACTCCAGCTTCTGGTGAAAGA...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTAGAAACAACAGGAGTTaGCTTGATATTGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LYDRKTASFLSTVLKETVRNNRS*LDIGCW Trigger: CCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTGCGTTTCCAAATACTaGAACATGTTCCACAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVCVSKY*NMFHRP Trigger: GGGCCTGTGGAACATGTTCCAGTATTTGGAAACGCA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTTCAGTTCTTCAAACTaGGTCTTGTACCTGCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVFSSSN*VLYLRP Trigger: TGGACGCAGGTACAAGACTCAGTTTGAAGAACTGAA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGCTGTAGCTTGTGTTTaGTGCTGTACAGTTAGGATG | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVAVACV*CCTVRM Trigger: CATCCTAACTGTACAGCAGCAAACACAAGCTACAGC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATCCATCATTACCATCTaGACTACCAGTTCCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSSIITI*TTSSFI Trigger: AATGAAGGAACTGGTAGTGCAGATGGTAATGATGGA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAAGCTGTCACTTTACTTaGAGTAGAAACAACAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: YDRKTASFLSTVLKETVSSCHFT*SRNNRS Trigger: ACTCCTGTTGTTTCTACTCCAAGTAAAGTGACAGCT...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTACGAACAGATCCACTTaGGTTTCCAAATACTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVTNRST*VSKYWN Trigger: GTTCCAGTATTTGGAAACGCAAGTGGATCTGTTCGT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR CCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTTCACTGTCTTCCATTaGTGTATAATCTCCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVFTVFH*CIISLG Trigger: ACCCAGGGAGATTATACACCAATGGAAGACAGTGAA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR TCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGCATCTAAATCTTTCTaGATGCCTTCCTTTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVASKSF*MPSFSV Trigger: GACTGAAAAGGAAGGCATTCAGAAAGATTTAGATGC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTAAATCTTTCTGAATaGCTTCCTTTTCAGTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVLNLSE*LPFQSV Trigger: CACGGACTGAAAAGGAAGGCATTCAGAAAGATTTAG...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTATCAGTACTTTCTTCTaGCATAACTTCTTCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVISTFF*HNFFLG Trigger: ACCGAGGAAGAAGTTATGGCAGAAGAAAGTACTGAT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS-3UTR GCA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTAGTGTGATTTGTCTTTaGTGTTCTGGAGCCTTATTA | + |
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Preference number: 4 (lower is better) Translates to: VTQDFLYDRKTASFLSTVSVICL*CSGALL Trigger: TAATAAGGCTCCAGAACAGCAAAGACAAATCACACT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS CCA 90 bp | TTGGTGACTGCGGTGCTTGCGGAGTCTGTCTCTCAGACGCTGACGTaGGCTGCTGTTCCCTGGCAACCTCCTGAGAGAAGGAAGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LVTAVLAESVSQTLT*AAVPWQPPERRKTL Trigger: CAGAGTCTTCCTTCTCTCAGGAGGTTGCCAGGGAACAGCAGCCCACGTCAGCGTCTGAGAGACAGACTCCGCAAGCACCGCAGTCACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | CTTCGGGAGAGGCATTTCCACTGTGTCCTCAGAGACTTGGTCTCCTaGTTCCATGGTGCTGTCCTCTTCCTCCTCCCGAGTGCGCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LRERHFHCVLRDLVS*FHGAVLFLLPSALW Trigger: CCAAAGCGCACTCGGGAGGAGGAAGAGGACAGCACCATGGAAGCAGGAGACCAAGTCTCTGAGGACACAGTGGAAATGCCTCTCCCGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 90 bp | GAGGCATTTCCACTGTGTCCTCAGAGACTTGGTCTCCTGCTTCCATaGTGCTGTCCTCTTCCTCCTCCCGAGTGCGCTTTGGCAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: EAFPLCPQRLGLLLP*CCPLPPPECALARR Trigger: CCTCCTTGCCAAAGCGCACTCGGGAGGAGGAAGAGGACAGCACCATGGAAGCAGGAGACCAAGTCTCTGAGGACACAGTGGAAATGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 90 bp | TCGATCTCGGACTGCTGCTCGGCCAGGAACTTCTCAAGTTTGTTCTaGGTCGACTTCGGCAGTTTGTTCAGTTCCGGGCGCTCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SISDCCSARNFSSLF*VDFGSLFSSGRSST Trigger: AGTGCTGGAGCGCCCGGAACTGAACAAACTGCCGAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | GCATTTCCACTGTGTCCTCAGAGACTTGGTCTCCTGCTTCCATGGTaGTGTCCTCTTCCTCCTCCCGAGTGCGCTTTGGCAAGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AFPLCPQRLGLLLPW*CPLPPPECALARRN Trigger: GTTCCTCCTTGCCAAAGCGCACTCGGGAGGAGGAAGAGGACAGCACCATGGAAGCAGGAGACCAAGTCTCTGAGGACACAGTGGAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS TCA 90 bp | GAGCTGCTCCTCTGTGGTTTTATCCTGGAGGTCCTGACGAAGGCGTaGCAGTTCAGACTGAAGCTGCACCGTCTGCTCCTGGAGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELLLCGFILEVLTKA*QFRLKLHRLLLETS Trigger: AGAAGTCTCCAGGAGCAGACGGTGCAGCTTCAGTCTGAACTGTCACGCCTTCGTCAGGACCTCCAGGATAAAACCACAGAGGAGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS TCA 90 bp | GCCCGTAGACGTTGTCACCATGGGAACCGACTGAGAGGCATGTTCTaGAGCATCAGAGGTGGTACTCTCAGTGAACACAGTCACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ARRRCHHGNRLRGMF*SIRGGTLSEHSHWG Trigger: GCCCCAGTGACTGTGTTCACTGAGAGTACCACCTCTGATGCTTCAGAACATGCCTCTCAGTCGGTTCCCATGGTGACAACGTCTACGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | TTAAATTTCTCGTGCCGCCCCTTCAGGCAGTCGATCTCGGACTGCTaGTCGGCCAGGAACTTCTCAAGTTTGTTCTGCGTCGACTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNFSCRPFRQSISDC*SARNFSSLFCVDFG Trigger: GCCGAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGAGAAATTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | GGTCGGATTTGTGACCGTTGCAGGTGTAACCATTGGGCGGATACTTaGCCTGGGTGTCGACTTATTCCCAGCCATAGCTGCAGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRICDRCRCNHWADT*PGCRLIPSHSCSCH Trigger: GTGACAGCTGCAGCTATGGCTGGGAATAAGTCGACACCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCAACGGTCACAAATCCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 90 bp | CTTGCGGAGTCTGTCTCTCAGACGCTGACGTGGGCTGCTGTTCCCTaGCAACCTCCTGAGAGAAGGAAGACTCTGCTGCACTTGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAESVSQTLTWAAVP*QPPERRKTLLHLYF Trigger: GAAATACAAGTGCAGCAGAGTCTTCCTTCTCTCAGGAGGTTGCCAGGGAACAGCAGCCCACGTCAGCGTCTGAGAGACAGACTCCGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 90 bp | TGTCTCTCAGACGCTGACGTGGGCTGCTGTTCCCTGGCAACCTCCTaGGAGAAGGAAGACTCTGCTGCACTTGTATTTCCTTCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSDADVGCCSLATS*EKEDSAALVFPSPL Trigger: CAGTGGTGAAGGAAATACAAGTGCAGCAGAGTCTTCCTTCTCTCAGGAGGTTGCCAGGGAACAGCAGCCCACGTCAGCGTCTGAGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | ACCTTAAATTTCTCGTGCCGCCCCTTCAGGCAGTCGATCTCGGACTaGTGCTCGGCCAGGAACTTCTCAAGTTTGTTCTGCGTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLNFSCRPFRQSISD*CSARNFSSLFCVDF Trigger: GAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGAGAAATTTAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | AGGCATTACGGTTGCTGTTGGGGTAGTGGTCGGATTTGTGACCGTTaGAGGTGTAACCATTGGGCGGATACTTGCCCTGGGTGTCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RHYGCCWGSGRICDR*RCNHWADTCPGCRL Trigger: AAGTCGACACCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCAACGGTCACAAATCCGACCACTACCCCAACAGCAACCGTAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 90 bp | GCCAAGATCAGAGTGACTGGAACTTGTCTGTGGCATGTCTTCAGGTaGCCCAAACCGGAATCTAGGAACACCGGCAACCTGTGGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: AKIRVTGTCLWHVFR*PKPESRNTGNLWGM Trigger: CATTCCCCACAGGTTGCCGGTGTTCCTAGATTCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCTGATCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | GGGGGATCTTGGCTGGTTGAGGGAAGATCTGATTCATCAGATGCTTaGACAGGCTCCTCTTCCTGCTGGCTATCAATTTCTAGGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSWLVEGRSDSSDA*TGSSSCWLSISRPA Trigger: GGCAGGCCTAGAAATTGATAGCCAGCAGGAAGAGGAGCCTGTCCAAGCATCTGATGAATCAGATCTTCCCTCAACCAGCCAAGATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | TCTATCTCAAAGTATTGTTGTTCACTCTCCACCTTAAATTTCTCGTaGCGCCCCTTCAGGCAGTCGATCTCGGACTGCTGCTCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SISKYCCSLSTLNFS*RPFRQSISDCCSAR Trigger: CCTGGCCGAGCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGAGAAATTTAAGGTGGAGAGTGAACAACAATACTTTGAGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | GACTACTACTGGTATCTACGGAGGAGCTCGAAGGGGGATCTTGGCTaGTTGAGGGAAGATCTGATTCATCAGATGCTTGGACAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DYYWYLRRSSKGDLG*LREDLIHQMLGQAP Trigger: AGGAGCCTGTCCAAGCATCTGATGAATCAGATCTTCCCTCAACCAGCCAAGATCCCCCTTCGAGCTCCTCCGTAGATACCAGTAGTAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TTGAGAAGCAAGTTGGCCAAGATCAGAGTGACTGGAACTTGTCTGTaGCATGTCTTCAGGTGGCCCAAACCGGAATCTAGGAACACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSKLAKIRVTGTCL*HVFRWPKPESRNTG Trigger: GCCGGTGTTCCTAGATTCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCTGATCTTGGCCAACTTGCTTCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 90 bp | GACCACGAACACCCTGTCTCAAGGTTGTCTGAAGTCTTACTCGTCTaGAAGGCTTCGGTTGACTACTACTGGTATCTACGGAGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DHEHPVSRLSEVLLV*KASVDYYWYLRRSS Trigger: CGAGCTCCTCCGTAGATACCAGTAGTAGTCAACCGAAGCCTTTCAGACGAGTAAGACTTCAGACAACCTTGAGACAGGGTGTTCGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | AACCTGTGGGGAATGAATAGCTTCAGCAAACCCATCAGTGCGATGTaGCACCACAAGAGTTGGGGTACTCGGGACTGTTCTGTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: NLWGMNSFSKPISAM*HHKSWGTRDCSVFI Trigger: GATGAAGACAGAACAGTCCCGAGTACCCCAACTCTTGTGGTGCCACATCGCACTGATGGGTTTGCTGAAGCTATTCATTCCCCACAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TTCCCAAACCTCCTTGAGAAGCAAGTTGGCCAAGATCAGAGTGACTaGAACTTGTCTGTGGCATGTCTTCAGGTGGCCCAAACCGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: FPNLLEKQVGQDQSD*NLSVACLQVAQTGI Trigger: GATTCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCTGATCTTGGCCAACTTGCTTCTCAAGGAGGTTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | CATAGCTTGCTCAAGCTTTGCAGAAAGACTGGCCACAGCTTTCTGTaGACGCTCATACTCTTCGCGCTGGCGTTTCAAAATCGGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLLKLCRKTGHSFL*TLILFALAFQNRCF Trigger: AAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGTGCACAGAAAGCTGTGGCCAGTCTTTCTGCAAAGCTTGAGCAAGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 90 bp | ACGCTGACGCACTATGGAATCAACAAGCTGCATCTGATGTTGTCGTaGCTCACGGAGCTGTTCCAGTTCAGCGAGAGAGTTCTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLTHYGINKLHLMLS*LTELFQFSERVLKF Trigger: AAACTTGAGAACTCTCTCGCTGAACTGGAACAGCTCCGTGAGTCACGACAACATCAGATGCAGCTTGTTGATTCCATAGTGCGTCAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 90 bp | ATCTCTGTCACCAGGCTGACCTTTACCGGTTCTCTGTGTGGACTGTaGAGCGAGCTGGGCTTCCATATTATTAAGGTGCTGTTTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISVTRLTFTGSLCGL*SELGFHIIKVLFQC Trigger: ACACTGAAACAGCACCTTAATAATATGGAAGCCCAGCTCGCTTCACAGTCCACACAGAGAACCGGTAAAGGTCAGCCTGGTGACAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | CTTGCGTTTCCAAATACTGGAACATGTTCCACAGGCCCTTCTGACTaGATAGCTTCCTGTGACTCCACCTGTGTAGTAGGCATTACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAFPNTGTCSTGPSD*IASCDSTCVVGITV Trigger: AACCGTAATGCCTACTACACAGGTGGAGTCACAGGAAGCTATGCAGTCAGAAGGGCCTGTGGAACATGTTCCAGTATTTGGAAACGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 90 bp | GAAAGACTGGCCACAGCTTTCTGTGCACGCTCATACTCTTCGCGCTaGCGTTTCAAAATCGGTGCTTTGGCTTCCACTTCTTTTACTATC | + |
|
Preference number: 5 (lower is better) Translates to: ERLATAFCARSYSSR*RFKIGALASTSFTI Trigger: GATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGTGCACAGAAAGCTGTGGCCAGTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TCTTCCAAGTCTTTTCATTCATTTGCTGTCGGAGCTGCTCCTCTGTaGTTTTATCCTGGAGGTCCTGACGAAGGCGTGACAGTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSKSFHSFAVGAAPL*FYPGGPDEGVTVQT Trigger: AGTCTGAACTGTCACGCCTTCGTCAGGACCTCCAGGATAAAACCACAGAGGAGCAGCTCCGACAGCAAATGAATGAAAAGACTTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 90 bp | AGATGGACGCTCCACTGGGGAACTTTGTACTACCTCAACTATGTTTaGGGACAATTCTTGATTTGTAGGCTCAATCTGCGGGTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RWTLHWGTLYYLNYV*GQFLICRLNLRVAL Trigger: CAGAGCCACCCGCAGATTGAGCCTACAAATCAAGAATTGTCCCCAAACATAGTTGAGGTAGTACAAAGTTCCCCAGTGGAGCGTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 90 bp | GAGGGAAGATCTGATTCATCAGATGCTTGGACAGGCTCCTCTTCCTaGTGGCTATCAATTTCTAGGCCTGCCTCTGAACTAATACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGRSDSSDAWTGSSS*WLSISRPASELIPS Trigger: TGAAGGTATTAGTTCAGAGGCAGGCCTAGAAATTGATAGCCAGCAGGAAGAGGAGCCTGTCCAAGCATCTGATGAATCAGATCTTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | TCTTGTATTGTTTTGTTGGCTTCTCCTGCTTCTTTGAGCAGTTTGTaGAGCTCGTCCACTGCCCGGGTTAGCTCATTACTCTTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCIVLLASPASLSSL*SSSTARVSSLLFAS Trigger: AGAGGCAAAGAGTAATGAGCTAACCCGGGCAGTGGACGAGCTGCACAAACTGCTCAAAGAAGCAGGAGAAGCCAACAAAACAATACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | GGAAGATCTGATTCATCAGATGCTTGGACAGGCTCCTCTTCCTGCTaGCTATCAATTTCTAGGCCTGCCTCTGAACTAATACCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRSDSSDAWTGSSSC*LSISRPASELIPSD Trigger: GTCTGAAGGTATTAGTTCAGAGGCAGGCCTAGAAATTGATAGCCAGCAGGAAGAGGAGCCTGTCCAAGCATCTGATGAATCAGATCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | GAACTACTGATGTCAGCAGAGCTGACCTCCTCATCCCGAATTACATaGTTACCCCTGGCTTCTTCAAGTTCCATCAAGAGCACTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: ELLMSAELTSSSRIT*LPLASSSSIKSTLI Trigger: GATAAGAGTGCTCTTGATGGAACTTGAAGAAGCCAGGGGTAACCATGTAATTCGGGATGAGGAGGTCAGCTCTGCTGACATCAGTAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | GCTTTCCAACGCTTAACATCCTCTTCCAGTAGCTTCTTTTCTGCCTaGAGCATACCGCTTTTCTCACTCAGCTCAGCATTGGCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AFQRLTSSSSSFFSA*SIPLFSLSSALASC Trigger: ACAAGAAGCCAATGCTGAGCTGAGTGAGAAAAGCGGTATGCTCCAGGCAGAAAAGAAGCTACTGGAAGAGGATGTTAAGCGTTGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TGCTCTCTGAGCTCTCTCTCTAAGCGACTAATCCGACCTTCATACTaGGACTTAAGAGCAGTCATTCGGACATCAAGCTCATCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLSSLSKRLIRPSY*DLRAVIRTSSSSFC Trigger: GCAGAAAGATGAGCTTGATGTCCGAATGACTGCTCTTAAGTCCCAGTATGAAGGTCGGATTAGTCGCTTAGAGAGAGAGCTCAGAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 90 bp | TCCTTGTTCAGGGAATCTTCTAAGCTGGTCACCATGGCTCGATACTaGTCCACATTACTGGTACTTGTCTTGAGTCTCTCCTTCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLFRESSKLVTMARY*STLLVLVLSLSFKS Trigger: TGACTTGAAGGAGAGACTCAAGACAAGTACCAGTAATGTGGAGCAGTATCGAGCCATGGTGACCAGCTTAGAAGATTCCCTGAACAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TTCAGCCTTTGTTTGGTTTCAGTCTCAGATCGCTCTAGTATGCCCTaGATTGTCTGTAGATTAGTCAGCAACAAGTTCTGCCCCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSLCLVSVSDRSSMP*IVCRLVSNKFCPLC Trigger: ACAGAGGGGGCAGAACTTGTTGCTGACTAATCTACAGACAATCCAGGGCATACTAGAGCGATCTGAGACTGAAACCAAACAAAGGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 90 bp | TGTGCTGTTCCTGATGGTCTCCTGAAGACTGAGTGGAAGTCTCCATaGCCTTGTTTTGTTGCGCTTTCAGTTCTTCAAACTGAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CAVPDGLLKTEWKSP*PCFVALSVLQTESC Trigger: ACAAGACTCAGTTTGAAGAACTGAAAGCGCAACAAAACAAGGCCATGGAGACTTCCACTCAGTCTTCAGGAGACCATCAGGAACAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 90 bp | AGGCTTTACAATTTTAGCTACAGCTGCTGCGGTGGGAGACATGGCTaGAAGCTCTTCTTCAGACAATATAGCTCCTTTACGTTTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLYNFSYSCCGGRHG*KLFFRQYSSFTFCS Trigger: GCTACAAAACGTAAAGGAGCTATATTGTCTGAAGAAGAGCTTGCAGCCATGTCTCCCACCGCAGCAGCTGTAGCTAAAATTGTAAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | TTCTTCATCAGCTCTTCATGTTGCGCCATTGTTTTTGCAGTTACCTaGACCTTTTCCCTTTCCACATTCAGGCTATCCTGCAGTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFISSSCCAIVFAVT*TFSLSTFRLSCSSC Trigger: GCAAGAACTGCAGGATAGCCTGAATGTGGAAAGGGAAAAGGTGCAGGTAACTGCAAAAACAATGGCGCAACATGAAGAGCTGATGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCACCATTGGGCGGATACTaGCCCTGGGTGTCGACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSPLGGY*PWVSTY Trigger: ATAAGTCGACACCCAGGGCAAGTATCCGCCCAATGG...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS CCA 90 bp | TTGTTTGTGACAATAAAATTCGGTACATGTCACGCTGACGCACTATaGAATCAACAAGCTGCATCTGATGTTGTCGTGACTCACGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFVTIKFGTCHADAL*NQQAASDVVVTHGA Trigger: AGCTCCGTGAGTCACGACAACATCAGATGCAGCTTGTTGATTCCATAGTGCGTCAGCGTGACATGTACCGAATTTTATTGTCACAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS-3UTR CAA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTGTGTCCTCAGAGACTaGGTCTCCTGCTTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYDRKTASFLSTVLKETVCVLRD*VSCFHG Trigger: ACCATGGAAGCAGGAGACCAAGTCTCTGAGGACACA...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS GCA 90 bp | TTTCTGTGCACGCTCATACTCTTCGCGCTGGCGTTTCAAAATCGGTaGTTTGGCTTCCACTTCTTTTACTATCTCATCCAGATACTTATT | + |
|
Preference number: 5 (lower is better) Translates to: FLCTLILFALAFQNR*FGFHFFYYLIQILI Trigger: AATAAGTATCTGGATGAGATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGTGCACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 90 bp | TTCTCCAATGGAATCTTGAGAGTCCTGATTATAGGCTTGAGTTTCTaGCTCTCCATCAGTACTTTCTTCTGCCATAACTTCTTCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSNGILRVLIIGLSF*LSISTFFCHNFFLG Trigger: ACCGAGGAAGAAGTTATGGCAGAAGAAAGTACTGATGGAGAGGCAGAAACTCAAGCCTATAATCAGGACTCTCAAGATTCCATTGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 90 bp | ACCAGTTACCTCAGCATCATCAGCTTCATATCCATCATTACCATCTaGACTACCAGTTCCTTCATTACTATCTTCACCCTCATCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSYLSIISFISIITI*TTSSFITIFTLISH Trigger: ATGGGAGATGAGGGTGAAGATAGTAATGAAGGAACTGGTAGTGCAGATGGTAATGATGGATATGAAGCTGATGATGCTGAGGTAACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
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| CDS CCA 90 bp | GTAGTCGGTTTTGTTTCTCTAGATCTTCACAGCGAGACACACTTTTaGAAACTTCATCCTTCAACACTCTCTCTCTCTCTTCCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VVGFVSLDLHSETHF*KLHPSTLSLSLPKM Trigger: CATCTTGGGAAGAGAGAGAGAGAGTGTTGAAGGATGAAGTTTCCAAAAGTGTGTCTCGCTGTGAAGATCTAGAGAAACAAAACCGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSGVGLI*AVGGSD Trigger: ATCAGACCCACCAACAGCCAATATCAAGCCAACTCC...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | CTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYDRKTASFLSTVLKETVTTGVG*ILAVGG Trigger: CCCACCAACAGCCAATATCAAGCCAACTCCTGTTGT...AACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTGCGGGTGGCTCTGTaGAGTGGGTTGTACAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVLRVAL*SGLYKS Trigger: GCTTTTGTACAACCCACTCAACAGAGCCACCCGCAG...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS CCA 90 bp | CCTTCCTTTTCAGTCCGTGCTTTACTTAAGTCTTCCCGCAGACTCTaGATTAAATTCTGGTTGTTAGTCAAGGATGCATTTGATCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFSVRALLKSSRRL*IKFWLLVKDAFDLA Trigger: TGCAAGATCAAATGCATCCTTGACTAACAACCAGAATTTAATCCAGAGTCTGCGGGAAGACTTAAGTAAAGCACGGACTGAAAAGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCACTCCATGGCCTTGTTTaGTTGCGCTTTCAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSLHGLV*LRFQFF Trigger: GAAGAACTGAAAGCGCAACAAAACAAGGCCATGGAG...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTGGCTGAGGGTATCTTaGAGCTCCTGCATTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVWLRVS*SSCISW Trigger: CCAGGAAATGCAGGAGCTCAAAGATACCCTCAGCCA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAGCTCCTGGAGACTTCTaGCTTCTGTCTCTTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSAPGDF*LLSLFQ Trigger: CTGAAAAAGAGACAGAAGCAAGAAGTCTCCAGGAGC...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAAGTCTTTTCATTCATTaGCTGTCGGAGCTGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSSLFIH*LSELLL Trigger: GAGGAGCAGCTCCGACAGCAAATGAATGAAAAGACT...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTCAAGGTGTCGCTCTaGATGCTCTCTGAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVLKVSL*MLSELS Trigger: AGAGAGCTCAGAGAGCATCAAGAGCGACACCTTGAG...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS GCA 90 bp | TTTGGAAACTTCATCCTTCAACACTCTCTCTCTCTCTTCCCAAGATaGTTTACATTCCAACAACTGGGATTCTGCTTTCTGAGTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FGNFILQHSLSLFPR*FTFQQLGFCFLSCF Trigger: GAAACAACTCAGAAAGCAGAATCCCAGTTGTTGGAATGTAAAGCATCTTGGGAAGAGAGAGAGAGAGTGTTGAAGGATGAAGTTTCCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATTTGCCTTGACCATCTaGAGAGGAAGTAGTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSFALTI*RGSSLL Trigger: CAACAGACTACTTCCTCTCAAGATGGTCAAGGCAAA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCAATCATCTCCTTTGCCTaGACCATCTTGAGAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSIISFA*TILRGS Trigger: ACTTCCTCTCAAGATGGTCAAGGCAAAGGAGATGAT...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS TCA 90 bp | TGGAGATTTATTTCTGTATCTAGCTGTCTCTTGGTATCTAATAGTTaGACGTCTAGATTCCTCGTAAGCGTATGTCTTTGTTCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRFISVSSCLLVSNS*TSRFLVSVCLCSTS Trigger: CGAGGTGGAACAAAGACATACGCTTACGAGGAATCTAGACGTTCAACTATTAGATACCAAGAGACAGCTAGATACAGAAATAAATCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS TCA 90 bp | CTCTACTTCCATCAATTTCTTCTCCAACTGTGTCTGAAACTCTGCTaGTTCTTTCAAGCGAACTTCAATGTTCTTATGAACCTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LYFHQFLLQLCLKLC*FFQANFNVLMNLLS Trigger: ACTGAGGAGGTTCATAAGAACATTGAAGTTCGCTTGAAAGAATCAGCAGAGTTTCAGACACAGTTGGAGAAGAAATTGATGGAAGTAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS TCA 90 bp | TGGGACTTAAGAGCAGTCATTCGGACATCAAGCTCATCTTTCTGCTaGTCTAGAGCTCCGTTCCTTTGTTTAAGTTCTTCAATTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: WDLRAVIRTSSSSFC*SRAPFLCLSSSISL Trigger: TAAAGAAATTGAAGAACTTAAACAAAGGAACGGAGCTCTAGATCAGCAGAAAGATGAGCTTGATGTCCGAATGACTGCTCTTAAGTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGAAGTCTCCATGGCCTaGTTTTGTTGCGCTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVEVSMA*FCCAFS Trigger: ACTGAAAGCGCAACAAAACAAGGCCATGGAGACTTC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTGCTCTGTTGAGTGGGTaGTACAAAAGCTGTAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVALLSG*YKSCSL Trigger: CAAGCTACAGCTTTTGTACAACCCACTCAACAGAGC...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | TATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTAAGGAGACAGTTTCATTCTCCAATGGAATCTaGAGAGTCCTGATTATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YDRKTASFLSTVLKETVSFSNGI*RVLIIG Trigger: GCCTATAATCAGGACTCTCAAGATTCCATTGGAGAA...TGAAACTGTCTCCTTAAGAACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTCTTCACTGTCTTCCATaGGTGTATAATCTCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVLHCLP*VYNLPG Trigger: CCCAGGGAGATTATACACCAATGGAAGACAGTGAAG...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTAACGAACAGATCCACTaGCGTTTCCAAATACTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVNEQIH*RFQILE Trigger: TTCCAGTATTTGGAAACGCAAGTGGATCTGTTCGTT...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS-3UTR CAA 90 bp | GTAACACAAGATTTTCTATATGACAGGAAAACAGCAAGCTTTCTAAGCACAGTTTACAAAAGCTGTAGCTaGTGTTTGCTGCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTQDFLYDRKTASFLSTVYKSCS*CLLLYS Trigger: ACTGTACAGCAGCAAACACAAGCTACAGCTTTTGTA...AACTGTGCTTAGAAAGCTTGCTGTTTTCCTGTCATATAGAAAATCTTGTGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151563.2 |
||
| CDS CCA 90 bp | TTGAGAGAAGAGAAATATCATCTAAACTTGAAGCTTGTAAGGGAATaGCCATTCCTGTTGTTTGTGACAATAAAATTCGGTACATGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LREEKYHLNLKLVRE*PFLLFVTIKFGTCH Trigger: GTGACATGTACCGAATTTTATTGTCACAAACAACAGGAATGGCCATTCCCTTACAAGCTTCAAGTTTAGATGATATTTCTCTTCTCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | CCCGTCCGCCGCCTCGCTCGCGGTCTCTCGCGCGCCTaGCCGCCTGAGACTCCCGCGGCGGGACCCGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PVRRLARGLSRA*PPETPAAGPVK Trigger: TTTGACGGGTCCCGCCGCGGGAGTCTCAGGCGGGCAGGCGCGCGAGAGACCGCGAGCGAGGCGGCGGACGGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | CATGTCGGCCGGGATCGCGGCAACAGCCGCAGCGGCTaGAGGAGAAGCCAAGGAGCAAGGAGAAGCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HVGRDRGNSRSG*RRSQGARRSAE Trigger: CTCCGCGCTTCTCCTTGCTCCTTGGCTTCTCCTTCAGCCGCTGCGGCTGTTGCCGCGATCCCGGCCGACATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | TTCGGCAGTTTGTTCAGTTCCGGGCGCTCCAGCACTTaGTGCAACACCGCCGCCATGTCGGCCGGGATCGCG | + |
|
Preference number: 6 (lower is better) Translates to: FGSLFSSGRSST*CNTAAMSAGIA Trigger: CGCGATCCCGGCCGACATGGCGGCGGTGTTGCAGCAAGTGCTGGAGCGCCCGGAACTGAACAAACTGCCGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | CTTCGGCAGTTTGTTCAGTTCCGGGCGCTCCAGCACTaGCTGCAACACCGCCGCCATGTCGGCCGGGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRQFVQFRALQH*LQHRRHVGRDR Trigger: GCGATCCCGGCCGACATGGCGGCGGTGTTGCAGCAAGTGCTGGAGCGCCCGGAACTGAACAAACTGCCGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | GCGGTGCTTGCGGAGTCTGTCTCTCAGACGCTGACGTaGGCTGCTGTTCCCTGGCAACCTCCTGAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVLAESVSQTLT*AAVPWQPPERR Trigger: CCTTCTCTCAGGAGGTTGCCAGGGAACAGCAGCCCACGTCAGCGTCTGAGAGACAGACTCCGCAAGCACCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | TCGTGCCGCCCCTTCAGGCAGTCGATCTCGGACTGCTaGTCGGCCAGGAACTTCTCAAGTTTGTTCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCRPFRQSISDC*SARNFSSLFCV Trigger: GACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | AGAGGTGGTACTCTCAGTGAACACAGTCACTGGGGCTaGTACTTGGAGAGGCGTAGTGGGAACGCTGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGGTLSEHSHWG*YLERRSGNAAA Trigger: GGCCGCAGCGTTCCCACTACGCCTCTCCAAGTAGCAGCCCCAGTGACTGTGTTCACTGAGAGTACCACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | GTACTCTCAGTGAACACAGTCACTGGGGCTGCTACTTaGAGAGGCGTAGTGGGAACGCTGCGGCCACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSVNTVTGAAT*RGVVGTLRPPD Trigger: GTCTGGTGGCCGCAGCGTTCCCACTACGCCTCTCCAAGTAGCAGCCCCAGTGACTGTGTTCACTGAGAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | GGTACTCTCAGTGAACACAGTCACTGGGGCTGCTACTaGGAGAGGCGTAGTGGGAACGCTGCGGCCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTLSEHSHWGCY*ERRSGNAAATR Trigger: TCTGGTGGCCGCAGCGTTCCCACTACGCCTCTCCAAGTAGCAGCCCCAGTGACTGTGTTCACTGAGAGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 90 bp | TCGGCCAGGAACTTCTCAAGTTTGTTCTGCGTCGACTTCGGCAGTTaGTTCAGTTCCGGGCGCTCCAGCACTTGCTGCAACACCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SARNFSSLFCVDFGS*FSSGRSSTCCNTAA Trigger: GGCGGCGGTGTTGCAGCAAGTGCTGGAGCGCCCGGAACTGAACAAACTGCCGAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 90 bp | AGGCAGTCGATCTCGGACTGCTGCTCGGCCAGGAACTTCTCAAGTTaGTTCTGCGTCGACTTCGGCAGTTTGTTCAGTTCCGGGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQSISDCCSARNFSS*FCVDFGSLFSSGRS Trigger: GGAGCGCCCGGAACTGAACAAACTGCCGAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGACTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | TTCTCGTGCCGCCCCTTCAGGCAGTCGATCTCGGACTaGTGCTCGGCCAGGAACTTCTCAAGTTTGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSCRPFRQSISD*CSARNFSSLFC Trigger: GCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | GACTGCTGCTCGGCCAGGAACTTCTCAAGTTTGTTCTaGGTCGACTTCGGCAGTTTGTTCAGTTCCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DCCSARNFSSLF*VDFGSLFSSGR Trigger: GCGCCCGGAACTGAACAAACTGCCGAAGTCGACGCAGAACAAACTTGAGAAGTTCCTGGCCGAGCAGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | GGTTGCTGTTGGGGTAGTGGTCGGATTTGTGACCGTTaGAGGTGTAACCATTGGGCGGATACTTGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GCCWGSGRICDR*RCNHWADTCPG Trigger: CCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCAACGGTCACAAATCCGACCACTACCCCAACAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CAA 90 bp | CTTCAGCTTCTTCGGGAGAGGCATTTCCACTGTGTCCTCAGAGACTaGGTCTCCTGCTTCCATGGTGCTGTCCTCTTCCTCCTCCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQLLRERHFHCVLRD*VSCFHGAVLFLLPS Trigger: ACTCGGGAGGAGGAAGAGGACAGCACCATGGAAGCAGGAGACCAAGTCTCTGAGGACACAGTGGAAATGCCTCTCCCGAAGAAGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS TCA 72 bp | CTCTGTGGTTTTATCCTGGAGGTCCTGACGAAGGCGTaGCAGTTCAGACTGAAGCTGCACCGTCTGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCGFILEVLTKA*QFRLKLHRLLL Trigger: CAGGAGCAGACGGTGCAGCTTCAGTCTGAACTGTCACGCCTTCGTCAGGACCTCCAGGATAAAACCACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS GCA 72 bp | TGTGACCGTTGCAGGTGTAACCATTGGGCGGATACTTaGCCTGGGTGTCGACTTATTCCCAGCCATAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CDRCRCNHWADT*PGCRLIPSHSC Trigger: GCAGCTATGGCTGGGAATAAGTCGACACCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCAACGGTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS TCA 72 bp | AAGTGTTGTTGCATGCCACCTATTCCTGGAGTCAACTaGAGACCACGCCCTACAGACTGCCTCCGGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KCCCMPPIPGVN*RPRPTDCLRVI Trigger: GATGACCCGGAGGCAGTCTGTAGGGCGTGGTCTTCAGTTGACTCCAGGAATAGGTGGCATGCAACAACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | AGTGGTCGGATTTGTGACCGTTGCAGGTGTAACCATTaGGCGGATACTTGCCCTGGGTGTCGACTTATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGRICDRCRCNH*ADTCPGCRLIP Trigger: GGGAATAAGTCGACACCCAGGGCAAGTATCCGCCCAATGGTTACACCTGCAACGGTCACAAATCCGACCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CCA 72 bp | AGAGTGACTGGAACTTGTCTGTGGCATGTCTTCAGGTaGCCCAAACCGGAATCTAGGAACACCGGCAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVTGTCLWHVFR*PKPESRNTGNL Trigger: CAGGTTGCCGGTGTTCCTAGATTCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | GCCACAGCTTTCTGTGCACGCTCATACTCTTCGCGCTaGCGTTTCAAAATCGGTGCTTTGGCTTCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATAFCARSYSSR*RFKIGALASTS Trigger: AGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGTGCACAGAAAGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | AACTTCTCAAGTTTGTTCTGCGTCGACTTCGGCAGTTaGTTCAGTTCCGGGCGCTCCAGCACTTGCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NFSSLFCVDFGS*FSSGRSSTCCN Trigger: GTTGCAGCAAGTGCTGGAGCGCCCGGAACTGAACAAACTGCCGAAGTCGACGCAGAACAAACTTGAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | GAGAAGCAAGTTGGCCAAGATCAGAGTGACTGGAACTaGTCTGTGGCATGTCTTCAGGTGGCCCAAACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: EKQVGQDQSDWN*SVACLQVAQTG Trigger: TCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCTGATCTTGGCCAACTTGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 90 bp | TACTACTGGTATCTACGGAGGAGCTCGAAGGGGGATCTTGGCTGGTaGAGGGAAGATCTGATTCATCAGATGCTTGGACAGGCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YYWYLRRSSKGDLGW*REDLIHQMLGQAPL Trigger: AAGAGGAGCCTGTCCAAGCATCTGATGAATCAGATCTTCCCTCAACCAGCCAAGATCCCCCTTCGAGCTCCTCCGTAGATACCAGTAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | CGTTGTCACCATGGGAACCGACTGAGAGGCATGTTCTaGAGCATCAGAGGTGGTACTCTCAGTGAACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RCHHGNRLRGMF*SIRGGTLSEHS Trigger: ACTGTGTTCACTGAGAGTACCACCTCTGATGCTTCAGAACATGCCTCTCAGTCGGTTCCCATGGTGACAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | AAGTATTGTTGTTCACTCTCCACCTTAAATTTCTCGTaGCGCCCCTTCAGGCAGTCGATCTCGGACTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KYCCSLSTLNFS*RPFRQSISDCC Trigger: GCAGCAGTCCGAGATCGACTGCCTGAAGGGGCGGCACGAGAAATTTAAGGTGGAGAGTGAACAACAATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | CCAAATACTGGAACATGTTCCACAGGCCCTTCTGACTaGATAGCTTCCTGTGACTCCACCTGTGTAGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PNTGTCSTGPSD*IASCDSTCVVG Trigger: GCCTACTACACAGGTGGAGTCACAGGAAGCTATGCAGTCAGAAGGGCCTGTGGAACATGTTCCAGTATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CCA 72 bp | CTACTGGTATCTACGGAGGAGCTCGAAGGGGGATCTTaGCTGGTTGAGGGAAGATCTGATTCATCAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVSTEELEGGS*LVEGRSDSSDA Trigger: AGCATCTGATGAATCAGATCTTCCCTCAACCAGCCAAGATCCCCCTTCGAGCTCCTCCGTAGATACCAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | GGAATGAATAGCTTCAGCAAACCCATCAGTGCGATGTaGCACCACAAGAGTTGGGGTACTCGGGACTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMNSFSKPISAM*HHKSWGTRDCS Trigger: AGAACAGTCCCGAGTACCCCAACTCTTGTGGTGCCACATCGCACTGATGGGTTTGCTGAAGCTATTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | AAGTTGGCCAAGATCAGAGTGACTGGAACTTGTCTGTaGCATGTCTTCAGGTGGCCCAAACCGGAATCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLAKIRVTGTCL*HVFRWPKPESR Trigger: CCTAGATTCCGGTTTGGGCCACCTGAAGACATGCCACAGACAAGTTCCAGTCACTCTGATCTTGGCCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | TATCTACGGAGGAGCTCGAAGGGGGATCTTGGCTGGTaGAGGGAAGATCTGATTCATCAGATGCTTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: YLRRSSKGDLGW*REDLIHQMLGQ Trigger: CTGTCCAAGCATCTGATGAATCAGATCTTCCCTCAACCAGCCAAGATCCCCCTTCGAGCTCCTCCGTAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS CAA 90 bp | CTGTCTCAAGGTTGTCTGAAGTCTTACTCGTCTGAAAGGCTTCGGTaGACTACTACTGGTATCTACGGAGGAGCTCGAAGGGGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSQGCLKSYSSERLR*TTTGIYGGARRGIL Trigger: CAAGATCCCCCTTCGAGCTCCTCCGTAGATACCAGTAGTAGTCAACCGAAGCCTTTCAGACGAGTAAGACTTCAGACAACCTTGAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | AACAGGAGTTGGCTTGATATTGGCTGTTGGTGGGTCTaGTGTGCTGGCAATTCCTCTTTCACCAGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NRSWLDIGCWWV*CAGNSSFTRSW Trigger: CCAGCTTCTGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS TCA 72 bp | GTAGTGGGAACGCTGCGGCCACCAGACTCTTCTTCATaGGCCAGAAAAAGGGGTGTTTCATACATTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VVGTLRPPDSSS*ARKRGVSYIPK Trigger: TTTGGGAATGTATGAAACACCCCTTTTTCTGGCTCATGAAGAAGAGTCTGGTGGCCGCAGCGTTCCCACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | TCTTTTCATTCATTTGCTGTCGGAGCTGCTCCTCTGTaGTTTTATCCTGGAGGTCCTGACGAAGGCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SFHSFAVGAAPL*FYPGGPDEGVT Trigger: TGTCACGCCTTCGTCAGGACCTCCAGGATAAAACCACAGAGGAGCAGCTCCGACAGCAAATGAATGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CCA 72 bp | AGCAAACCCATCAGTGCGATGTGGCACCACAAGAGTTaGGGTACTCGGGACTGTTCTGTCTTCATCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SKPISAMWHHKS*GTRDCSVFIIK Trigger: TTTGATGATGAAGACAGAACAGTCCCGAGTACCCCAACTCTTGTGGTGCCACATCGCACTGATGGGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | GGTTGTCTGAAGTCTTACTCGTCTGAAAGGCTTCGGTaGACTACTACTGGTATCTACGGAGGAGCTCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCLKSYSSERLR*TTTGIYGGARR Trigger: CCTTCGAGCTCCTCCGTAGATACCAGTAGTAGTCAACCGAAGCCTTTCAGACGAGTAAGACTTCAGACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | TTGTCTTTGCTGTTCTGGAGCCTTATTAGTGGGTTCTaGAGGCTCATCCCTCTGCTCAAGGTGTCGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLLFWSLISGF*RLIPLLKVSLL Trigger: CAAGAGCGACACCTTGAGCAGAGGGATGAGCCTCAAGAACCCACTAATAAGGCTCCAGAACAGCAAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CAA 72 bp | TGTAGGCTCAATCTGCGGGTGGCTCTGTTGAGTGGGTaGTACAAAAGCTGTAGCTTGTGTTTGCTGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CRLNLRVALLSG*YKSCSLCLLLY Trigger: GTACAGCAGCAAACACAAGCTACAGCTTTTGTACAACCCACTCAACAGAGCCACCCGCAGATTGAGCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CAA 90 bp | CAGTGTGATTTGTCTTTGCTGTTCTGGAGCCTTATTAGTGGGTTCTaGAGGCTCATCCCTCTGCTCAAGGTGTCGCTCTTGATGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QCDLSLLFWSLISGF*RLIPLLKVSLLMLS Trigger: AGAGAGCATCAAGAGCGACACCTTGAGCAGAGGGATGAGCCTCAAGAACCCACTAATAAGGCTCCAGAACAGCAAAGACAAATCACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS TCA 72 bp | CACCCTGTCTCAAGGTTGTCTGAAGTCTTACTCGTCTaGAAGGCTTCGGTTGACTACTACTGGTATCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: HPVSRLSEVLLV*KASVDYYWYLR Trigger: CCGTAGATACCAGTAGTAGTCAACCGAAGCCTTTCAGACGAGTAAGACTTCAGACAACCTTGAGACAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | GATCTTGTATTGTTTTGTTGGCTTCTCCTGCTTCTTTaGGCAGTTTGTGCAGCTCGTCCACTGCCCGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: DLVLFCWLLLLL*AVCAARPLPGL Trigger: TAACCCGGGCAGTGGACGAGCTGCACAAACTGCTCAAAGAAGCAGGAGAAGCCAACAAAACAATACAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | CACTATGGAATCAACAAGCTGCATCTGATGTTGTCGTaGCTCACGGAGCTGTTCCAGTTCAGCGAGAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HYGINKLHLMLS*LTELFQFSERV Trigger: AACTCTCTCGCTGAACTGGAACAGCTCCGTGAGTCACGACAACATCAGATGCAGCTTGTTGATTCCATAGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | AGGGAATCTTCTAAGCTGGTCACCATGGCTCGATACTaGTCCACATTACTGGTACTTGTCTTGAGTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RESSKLVTMARY*STLLVLVLSLS Trigger: GGAGAGACTCAAGACAAGTACCAGTAATGTGGAGCAGTATCGAGCCATGGTGACCAGCTTAGAAGATTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | GCCAAATACTGCTGTGGAAGTAGATGGACGCTCCACTaGGGAACTTTGTACTACCTCAACTATGTTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AKYCCGSRWTLH*GTLYYLNYVWG Trigger: TCCCCAAACATAGTTGAGGTAGTACAAAGTTCCCCAGTGGAGCGTCCATCTACTTCCACAGCAGTATTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | GCTGCAGCTGTCACTTTACTTGGAGTAGAAACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAAVTLLGVETTGVG*ILAVGGSDVLAIPL Trigger: AAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCTACTCCAAGTAAAGTGACAGCTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | TGGGGACAATTCTTGATTTGTAGGCTCAATCTGCGGGTGGCTCTGTaGAGTGGGTTGTACAAAAGCTGTAGCTTGTGTTTGCTGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WGQFLICRLNLRVAL*SGLYKSCSLCLLLY Trigger: GTACAGCAGCAAACACAAGCTACAGCTTTTGTACAACCCACTCAACAGAGCCACCCGCAGATTGAGCCTACAAATCAAGAATTGTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | CACTGGGGAACTTTGTACTACCTCAACTATGTTTGGGGACAATTCTaGATTTGTAGGCTCAATCTGCGGGTGGCTCTGTTGAGTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HWGTLYYLNYVWGQF*ICRLNLRVALLSGL Trigger: CAACCCACTCAACAGAGCCACCCGCAGATTGAGCCTACAAATCAAGAATTGTCCCCAAACATAGTTGAGGTAGTACAAAGTTCCCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | GGCAATTCCTCTTTCACCAGAAGCTGGAGTGGTTTTCAGTGTGATTaGTCTTTGCTGTTCTGGAGCCTTATTAGTGGGTTCTTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GNSSFTRSWSGFQCD*SLLFWSLISGFLRL Trigger: GAGCCTCAAGAACCCACTAATAAGGCTCCAGAACAGCAAAGACAAATCACACTGAAAACCACTCCAGCTTCTGGTGAAAGAGGAATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | GCTGTCACTTTACTTGGAGTAGAAACAACAGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCTCTTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AVTLLGVETTGVGLI*AVGGSDVLAIPLSP Trigger: TGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCTACTCCAAGTAAAGTGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 72 bp | ACGCTCATACTCTTCGCGCTGGCGTTTCAAAATCGGTaGTTTGGCTTCCACTTCTTTTACTATCTCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLILFALAFQNR*FGFHFFYYLIQ Trigger: CTGGATGAGATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 72 bp | CTCAAAGATTTCCTGCAACTGTTTAAGGGCAGCCTTTaGTTCTATAGCCTCTGTGGAGTCAATGACGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKDFLQLFKGSL*FYSLCGVNDGF Trigger: GAACCCGTCATTGACTCCACAGAGGCTATAGAAGCAAAGGCTGCCCTTAAACAGTTGCAGGAAATCTTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 72 bp | CCCTGGATTGTCTGTAGATTAGTCAGCAACAAGTTCTaGCCCCTCTGTTCAGCTAACAAAGACTCTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWIVCRLVSNKF*PLCSANKDSLC Trigger: GCAAAGAGAGTCTTTGTTAGCTGAACAGAGGGGGCAGAACTTGTTGCTGACTAATCTACAGACAATCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 72 bp | AGCTCTTCATGTTGCGCCATTGTTTTTGCAGTTACCTaGACCTTTTCCCTTTCCACATTCAGGCTATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCCAIVFAVT*TFSLSTFRLSC Trigger: GCAGGATAGCCTGAATGTGGAAAGGGAAAAGGTGCAGGTAACTGCAAAAACAATGGCGCAACATGAAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | GATTCATCAGATGCTTGGACAGGCTCCTCTTCCTGCTaGCTATCAATTTCTAGGCCTGCCTCTGAACTAATA | + |
|
Preference number: 6 (lower is better) Translates to: DSSDAWTGSSSC*LSISRPASELI Trigger: TATTAGTTCAGAGGCAGGCCTAGAAATTGATAGCCAGCAGGAAGAGGAGCCTGTCCAAGCATCTGATGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124484.2 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | CCTTTACCGGTTCTCTGTGTGGACTGTGAAGCGAGCTaGGCTTCCATATTATTAAGGTGCTGTTTCAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PLPVLCVDCEAS*ASILLRCCFSV Trigger: TACACTGAAACAGCACCTTAATAATATGGAAGCCCAGCTCGCTTCACAGTCCACACAGAGAACCGGTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | CCTGATGGTCTCCTGAAGACTGAGTGGAAGTCTCCATaGCCTTGTTTTGTTGCGCTTTCAGTTCTTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PDGLLKTEWKSP*PCFVALSVLQT Trigger: AGTTTGAAGAACTGAAAGCGCAACAAAACAAGGCCATGGAGACTTCCACTCAGTCTTCAGGAGACCATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 72 bp | AGCTCTCTCTCTAAGCGACTAATCCGACCTTCATACTaGGACTTAAGAGCAGTCATTCGGACATCAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLSKRLIRPSY*DLRAVIRTSSS Trigger: TGAGCTTGATGTCCGAATGACTGCTCTTAAGTCCCAGTATGAAGGTCGGATTAGTCGCTTAGAGAGAGAGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 72 bp | GTCACTTTACTTGGAGTAGAAACAACAGGAGTTGGCTaGATATTGGCTGTTGGTGGGTCTGATGTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLLGVETTGVG*ILAVGGSDVLA Trigger: TGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCTACTCCAAGTAAAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 72 bp | TGGAGTGGTTTTCAGTGTGATTTGTCTTTGCTGTTCTaGAGCCTTATTAGTGGGTTCTTGAGGCTCATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WSGFQCDLSLLF*SLISGFLRLIP Trigger: AGGGATGAGCCTCAAGAACCCACTAATAAGGCTCCAGAACAGCAAAGACAAATCACACTGAAAACCACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 72 bp | CTCCACTGGGGAACTTTGTACTACCTCAACTATGTTTaGGGACAATTCTTGATTTGTAGGCTCAATCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHWGTLYYLNYV*GQFLICRLNLR Trigger: CCGCAGATTGAGCCTACAAATCAAGAATTGTCCCCAAACATAGTTGAGGTAGTACAAAGTTCCCCAGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 72 bp | TTACTTGGAGTAGAAACAACAGGAGTTGGCTTGATATaGGCTGTTGGTGGGTCTGATGTGCTGGCAATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGVETTGVGLI*AVGGSDVLAIP Trigger: AGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTTTCTACTCCAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 72 bp | TTCTTGATTTGTAGGCTCAATCTGCGGGTGGCTCTGTaGAGTGGGTTGTACAAAAGCTGTAGCTTGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLICRLNLRVAL*SGLYKSCSLCL Trigger: CAAACACAAGCTACAGCTTTTGTACAACCCACTCAACAGAGCCACCCGCAGATTGAGCCTACAAATCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CAA 90 bp | CTTTCTGAGTTGTTTCTTCCAAATGCTGACGGATTGATGTCATTTTaGAAACCTGTTCCTTGGCAGCTTGCAGAGCTTCGACATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSELFLPNADGLMSF*KPVPWQLAELRHQQ Trigger: CTGCTGATGTCGAAGCTCTGCAAGCTGCCAAGGAACAGGTTTCAAAAATGACATCAATCCGTCAGCATTTGGAAGAAACAACTCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS GCA 72 bp | TTTTCCCTTTCCACATTCAGGCTATCCTGCAGTTCTTaGAACTCCCGTTCTAGAAGTTCAACTCTTTGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FSLSTFRLSCSS*NSRSRSSTLCR Trigger: TCGACAAAGAGTTGAACTTCTAGAACGGGAGTTGCAAGAACTGCAGGATAGCCTGAATGTGGAAAGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | CATACTCTTCGCGCTGGCGTTTCAAAATCGGTGCTTTaGCTTCCACTTCTTTTACTATCTCATCCAGATACT | + |
|
Preference number: 6 (lower is better) Translates to: HTLRAGVSKSVL*LPLLLLSHPDT Trigger: AGTATCTGGATGAGATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CCA 72 bp | TGTTTGGTTTCAGTCTCAGATCGCTCTAGTATGCCCTaGATTGTCTGTAGATTAGTCAGCAACAAGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLVSVSDRSSMP*IVCRLVSNKFC Trigger: GCAGAACTTGTTGCTGACTAATCTACAGACAATCCAGGGCATACTAGAGCGATCTGAGACTGAAACCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | TCATACTCTTCGCGCTGGCGTTTCAAAATCGGTGCTTaGGCTTCCACTTCTTTTACTATCTCATCCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: SYSSRWRFKIGA*ASTSFTISSRY Trigger: GTATCTGGATGAGATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 72 bp | TCTTTCACCAGAAGCTGGAGTGGTTTTCAGTGTGATTaGTCTTTGCTGTTCTGGAGCCTTATTAGTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFTRSWSGFQCD*SLLFWSLISGF Trigger: GAACCCACTAATAAGGCTCCAGAACAGCAAAGACAAATCACACTGAAAACCACTCCAGCTTCTGGTGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
||
| CDS CAA 90 bp | TGTGCACGCTCATACTCTTCGCGCTGGCGTTTCAAAATCGGTGCTTaGGCTTCCACTTCTTTTACTATCTCATCCAGATACTTATTAATC | + |
|
Preference number: 6 (lower is better) Translates to: CARSYSSRWRFKIGA*ASTSFTISSRYLLI Trigger: GATTAATAAGTATCTGGATGAGATAGTAAAAGAAGTGGAAGCCAAAGCACCGATTTTGAAACGCCAGCGCGAAGAGTATGAGCGTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS CAA 90 bp | TGTAGGTTCTGTTCGAGCCTTTCCTTTTCCTCCCGTAGCATCTTGTaGGTCTCCATAACAACGTTCATTGTTTCAGTTTTCTTCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRFCSSLSFSSRSIL*VSITTFIVSVFFIS Trigger: GCTGATGAAGAAAACTGAAACAATGAACGTTGTTATGGAGACCAACAAGATGCTACGGGAGGAAAAGGAAAGGCTCGAACAGAACCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
||
| CDS TCA 72 bp | TGTTCCAGTTCAGCGAGAGAGTTCTCAAGTTTATGCTaGAGTTCAGCAATCTTAGAGGAAGTTGTCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CSSSAREFSSLC*SSAILEEVVSC Trigger: GCAAGAGACAACTTCCTCTAAGATTGCTGAACTTCAGCATAAACTTGAGAACTCTCTCGCTGAACTGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 72 bp | TTCAAGTCATTGACCTGTTCTTCAGCCTGCCTTAGCTaGCTTTTAAGATCATCAACGTCATCTCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: FKSLTCSSACLS*LLRSSTSSLSP Trigger: TGGTGACAGAGATGACGTTGATGATCTTAAAAGTCAGCTAAGGCAGGCTGAAGAACAGGTCAATGACTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 72 bp | AGAGCAGTCATTCGGACATCAAGCTCATCTTTCTGCTaGTCTAGAGCTCCGTTCCTTTGTTTAAGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RAVIRTSSSSFC*SRAPFLCLSSS Trigger: TGAAGAACTTAAACAAAGGAACGGAGCTCTAGATCAGCAGAAAGATGAGCTTGATGTCCGAATGACTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS GCA 72 bp | GGAATCTTGAGAGTCCTGATTATAGGCTTGAGTTTCTaGCTCTCCATCAGTACTTTCTTCTGCCATAACTTC | + |
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Preference number: 6 (lower is better) Translates to: GILRVLIIGLSF*LSISTFFCHNF Trigger: GAAGTTATGGCAGAAGAAAGTACTGATGGAGAGGCAGAAACTCAAGCCTATAATCAGGACTCTCAAGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 ENSMUST00000151563.2 |
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| CDS CCA 72 bp | ACAATAAAATTCGGTACATGTCACGCTGACGCACTATaGAATCAACAAGCTGCATCTGATGTTGTCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: TIKFGTCHADAL*NQQAASDVVVT Trigger: AGTCACGACAACATCAGATGCAGCTTGTTGATTCCATAGTGCGTCAGCGTGACATGTACCGAATTTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | TTTTCTGCTCTTACTTCTGCAACTGCTAGCTTTTCATaGGCTCCTCTCAAGTCTTGCGTCATTGTGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: FSALTSATASFS*APLKSCVIVLM Trigger: CATCAACACAATGACGCAAGACTTGAGAGGAGCCAATGAAAAGCTAGCAGTTGCAGAAGTAAGAGCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | TTGTTTCTTCCAAATGCTGACGGATTGATGTCATTTTaGAAACCTGTTCCTTGGCAGCTTGCAGAGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: LFLPNADGLMSF*KPVPWQLAELR Trigger: TCGAAGCTCTGCAAGCTGCCAAGGAACAGGTTTCAAAAATGACATCAATCCGTCAGCATTTGGAAGAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | TTCTGTTCGAGCCTTTCCTTTTCCTCCCGTAGCATCTaGTTGGTCTCCATAACAACGTTCATTGTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FCSSLSFSSRSI*LVSITTFIVSV Trigger: AACTGAAACAATGAACGTTGTTATGGAGACCAACAAGATGCTACGGGAGGAAAAGGAAAGGCTCGAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 90 bp | TGTTGTAGGTTCTGTTCGAGCCTTTCCTTTTCCTCCCGTAGCATCTaGTTGGTCTCCATAACAACGTTCATTGTTTCAGTTTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CCRFCSSLSFSSRSI*LVSITTFIVSVFFI Trigger: GATGAAGAAAACTGAAACAATGAACGTTGTTATGGAGACCAACAAGATGCTACGGGAGGAAAAGGAAAGGCTCGAACAGAACCTACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS GCA 72 bp | TTCCCAAGATGCTTTACATTCCAACAACTGGGATTCTaGTTTCTGAGTTGTTTCTTCCAAATGCTGACGGAT | + |
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Preference number: 6 (lower is better) Translates to: FPRCFTFQQLGF*FLSCFFQMLTD Trigger: ATCCGTCAGCATTTGGAAGAAACAACTCAGAAAGCAGAATCCCAGTTGTTGGAATGTAAAGCATCTTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | TCAGTCCGTGCTTTACTTAAGTCTTCCCGCAGACTCTaGATTAAATTCTGGTTGTTAGTCAAGGATGCATTT | + |
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Preference number: 6 (lower is better) Translates to: SVRALLKSSRRL*IKFWLLVKDAF Trigger: AAATGCATCCTTGACTAACAACCAGAATTTAATCCAGAGTCTGCGGGAAGACTTAAGTAAAGCACGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 90 bp | GTTCCGGAGCAGGAGTGGAAACAGTCTGTGATGTACTTGAACGTTTaGGAGTTGAGAGAAGAGAAATATCATCTAAACTTGAAGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VPEQEWKQSVMYLNV*ELREEKYHLNLKLV Trigger: TACAAGCTTCAAGTTTAGATGATATTTCTCTTCTCTCAACTCCAAAACGTTCAAGTACATCACAGACTGTTTCCACTCCTGCTCCGGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 90 bp | CCCAAGATGCTTTACATTCCAACAACTGGGATTCTGCTTTCTGAGTaGTTTCTTCCAAATGCTGACGGATTGATGTCATTTTTGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: PKMLYIPTTGILLSE*FLPNADGLMSFLKP Trigger: AGGTTTCAAAAATGACATCAATCCGTCAGCATTTGGAAGAAACAACTCAGAAAGCAGAATCCCAGTTGTTGGAATGTAAAGCATCTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | TTTGTTTCTCTAGATCTTCACAGCGAGACACACTTTTaGAAACTTCATCCTTCAACACTCTCTCTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FVSLDLHSETHF*KLHPSTLSLSL Trigger: AAGAGAGAGAGAGAGTGTTGAAGGATGAAGTTTCCAAAAGTGTGTCTCGCTGTGAAGATCTAGAGAAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 90 bp | AAATATCATCTAAACTTGAAGCTTGTAAGGGAATGGCCATTCCTGTaGTTTGTGACAATAAAATTCGGTACATGTCACGCTGACGCACTA | + |
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Preference number: 6 (lower is better) Translates to: KYHLNLKLVREWPFL*FVTIKFGTCHADAL Trigger: TAGTGCGTCAGCGTGACATGTACCGAATTTTATTGTCACAAACAACAGGAATGGCCATTCCCTTACAAGCTTCAAGTTTAGATGATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | GAGCATTTAACTCATTGTGGAATTTCTCTTCCATACTaGCCTGCTGTTCTTTGGCCTCTTTTAATTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: EHLTHCGISLPY*PAVLWPLLILS Trigger: TGACAAAATTAAAAGAGGCCAAAGAACAGCAGGCCAGTATGGAAGAGAAATTCCACAATGAGTTAAATGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CCA 72 bp | TCTTCAATTCACTTAATTGCTGTTCCATGCTCTCGATaGCTTTCCTCTTATCATCCTGAAGTTCTTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSIHLIAVPCSR*LSSYHPEVLAF Trigger: AAAAGCAAGAACTTCAGGATGATAAGAGGAAAGCCATCGAGAGCATGGAACAGCAATTAAGTGAATTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | CTTAAGTCTTCCCGCAGACTCTGGATTAAATTCTGGTaGTTAGTCAAGGATGCATTTGATCTTGCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: LKSSRRLWIKFW*LVKDAFDLAIS Trigger: TGAAATTGCAAGATCAAATGCATCCTTGACTAACAACCAGAATTTAATCCAGAGTCTGCGGGAAGACTTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS TCA 72 bp | CATCAATTTCTTCTCCAACTGTGTCTGAAACTCTGCTaGTTCTTTCAAGCGAACTTCAATGTTCTTATGAAC | + |
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Preference number: 6 (lower is better) Translates to: HQFLLQLCLKLC*FFQANFNVLMN Trigger: GTTCATAAGAACATTGAAGTTCGCTTGAAAGAATCAGCAGAGTTTCAGACACAGTTGGAGAAGAAATTGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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| CDS CAA 72 bp | TCAACAAATCCTCTACATGTTTCTGAAGATGTTCATTaGATGTTTTCAAGCCATTCATCTGTTCTTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: STNPLHVSEDVH*MFSSHSSVLPV Trigger: GACTGGAAGAACAGATGAATGGCTTGAAAACATCAAATGAACATCTTCAGAAACATGTAGAGGATTTGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119161.9 ENSMUST00000124973.9 |
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