Pregenerated sensors for TPPP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008813Ensembl transcript IDs: ENSMUST00000008957.13, ENSMUST00000177625.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGCTCCTCTTTCCTTGCTGCTGCTaGATGATTCTCCAAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: FMVLKTRGQETSGQRWLLFPCCC*MILQRQ Trigger: CTGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAA...GAGGAGCCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CCA 90 bp | TTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGCTCCTCAAGACAGCGAATCGATaGAATGTTCTTTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FMVLKTRGQETSGQRWLLKTANR*NVLSAS Trigger: AGAAGCAGAAAGAACATTCCATCGATTCGCTGTCTT...GAGGAGCCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CCA 90 bp | CTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGCCCTTGAAGCGCTTTTaGCCCAGCTCCTTCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: LHTHRLLFPRFHGVKNTGPLKRF*PSSFIA Trigger: GGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGG...CCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR GCA 90 bp | TTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGAGCCCAGCTCCTTCATTaGCTCTTGAAACTGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: FLDFMVLKTRGQETSGQRAQLLH*LLKLLK Trigger: TTTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGC...TCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR TCA 90 bp | CTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAAAGCGCTCCTTGTaGGTTCCGGTGTACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: LHTHRLLFPRFHGVKNTGSKRSL*VPVYLL Trigger: CAGTAAGTACACCGGAACTCACAAGGAGCGCTTTGA...CCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR TCA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTCAAAGCGCTCCTTGTaGGTTCCGGTGTACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNSKRSL*VPVYLL Trigger: CAGTAAGTACACCGGAACTCACAAGGAGCGCTTTGA...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR TCA 90 bp | CTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGCTGCCTTGCCATCCATaGTATCACAGTCTTTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LHTHRLLFPRFHGVKNTGLPCHP*YHSLYR Trigger: TCTGTAAAGACTGTGATATCATGGATGGCAAGGCAG...CCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR GCA 90 bp | CACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAATCTGTGGAGGTCACTaGCTTGCCATCCATGATATC | + |
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Preference number: 4 (lower is better) Translates to: HTHRLLFPRFHGVKNTGSICGGH*LAIHDI Trigger: GATATCATGGATGGCAAGGCAGTGACCTCCACAGAT...TGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR GCA 90 bp | CACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAATCTGTGGAGGTCACTaGCTTGCCATCCATGATATC | + |
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Preference number: 4 (lower is better) Translates to: HIVYYFLDFMVLKTRGQEICGGH*LAIHDI Trigger: GATATCATGGATGGCAAGGCAGTGACCTCCACAGAT...TTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGTTCCGGTGTACTTACTaGTGTCTGTCAACCGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: CCTHIVYYFLDFMVLKTRFRCTY*CLSTGL Trigger: TAGACCGGTTGACAGACACCAGTAAGTACACCGGAA...CCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008957.13 |
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| CDS-3UTR CCA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTTCCGGTGTACTTACTaGTGTCTGTCAACCGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNFRCTY*CLSTGL Trigger: TAGACCGGTTGACAGACACCAGTAAGTACACCGGAA...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR TCA 90 bp | TGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCTGCCTTGCCATCCATaGTATCACAGTCTTTACAGA | + |
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Preference number: 4 (lower is better) Translates to: CTHIVYYFLDFMVLKTRGLPCHP*YHSLYR Trigger: TCTGTAAAGACTGTGATATCATGGATGGCAAGGCAG...ACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR GCA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACGCCCAGCTCCTTCATTaGCTCTTGAAACTGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNAQLLH*LLKLLK Trigger: TTTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGC...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CCA 90 bp | CACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAATTTCCTTGCTGCTGCTaGATGATTCTCCAAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: HIVYYFLDFMVLKTRGQEFPCCC*MILQRQ Trigger: CTGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAA...TTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CCA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACAAGACAGCGAATCGATaGAATGTTCTTTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNKTANR*NVLSAS Trigger: AGAAGCAGAAAGAACATTCCATCGATTCGCTGTCTT...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CCA 90 bp | AGGTGCCGGCCCCCTTGTAGCCACTCACGTAGCCTGAGTTGTCAGTaGTCTCTTCCCGACCTTCAATACCTTTTCCCTTACCACTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: RCRPPCSHSRSLSCQ*SLPDLQYLFPYHSH Trigger: ATGAGAGTGGTAAGGGAAAAGGTATTGAAGGTCGGGAAGAGACCACTGACAACTCAGGCTACGTGAGTGGCTACAAGGGGGCCGGCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS TCA 90 bp | GTACTTACTGGTGTCTGTCAACCGGTCTACTCCACCCACCGTCGTTaGTTTAGTGACACCGGTGGTGGCAGGATCTTTGCCTTCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: VLTGVCQPVYSTHRR*FSDTGGGRIFAFHE Trigger: CTCATGGAAGGCAAAGATCCTGCCACCACCGGTGTCACTAAATCAACGACGGTGGGTGGAGTAGACCGGTTGACAGACACCAGTAAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS TCA 90 bp | TTTCTTGTCATAGGTGCCGGCCCCCTTGTAGCCACTCACGTAGCCTaGGTTGTCAGTGGTCTCTTCCCGACCTTCAATACCTTTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: FLVIGAGPLVATHVA*VVSGLFPTFNTFSL Trigger: AAGGGAAAAGGTATTGAAGGTCGGGAAGAGACCACTGACAACTCAGGCTACGTGAGTGGCTACAAGGGGGCCGGCACCTATGACAAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGGGCCCAGCTCCTTCATaGCCTCTTGAAACTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LDFMVLKTRGQETSGQRWGPAPS*PLETVE Trigger: TTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCC...CCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS GCA 90 bp | GGCCTTCACTTTGCTGAACACAATGTCCACATCTGTGGAGGTCACTaGCTTGCCATCCATGATATCACAGTCTTTACAGAGTTTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: GLHFAEHNVHICGGH*LAIHDITVFTEFGE Trigger: TTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGGCAAGGCAGTGACCTCCACAGATGTGGACATTGTGTTCAGCAAAGTGAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | GATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGCTCTGCCTCTTGAAACTGTaGAAAGTTGATGGTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DFMVLKTRGQETSGQRWLCLLKL*KVDGSG Trigger: GCCAGAACCATCAACTTTCAACAGTTTCAAGAGGCA...GAGCCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | TTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGCTCCTCCAGTCTTTACAGAGTTaGGAGAAGTTCTTGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: FMVLKTRGQETSGQRWLLQSLQS*EKFLLV Trigger: TACCAACAAGAACTTCTCCAAACTCTGTAAAGACTG...GAGGAGCCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | TTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGAATGGTTCTGGCATTCTaGGCCTTCACTTTGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: FLDFMVLKTRGQETSGQRMVLAF*AFTLLN Trigger: GTTCAGCAAAGTGAAGGCCAAGAATGCCAGAACCAT...TCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAACCCCTTGAAGCGCTTTaGGCCCAGCTCCTTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: HIVYYFLDFMVLKTRGQEPLEAL*AQLLHC Trigger: GCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGG...TTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | ACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGCCCCTTGAAGCGCTTTaGGCCCAGCTCCTTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: THIVYYFLDFMVLKTRGQPLEAL*AQLLHC Trigger: GCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGG...CTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | TTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGCCTCTTGAAACTGTaGAAAGTTGATGGTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FLDFMVLKTRGQETSGQRCLLKL*KVDGSG Trigger: GCCAGAACCATCAACTTTCAACAGTTTCAAGAGGCA...TCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTAGCGGGCAAAGATGGCAGTCTTTACAGAGTTaGGAGAAGTTCTTGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LDFMVLKTRGQETSGQRWQSLQS*EKFLLV Trigger: TACCAACAAGAACTTCTCCAAACTCTGTAAAGACTG...CCATCTTTGCCCGCTAGTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGATGGTTCTGGCATTCTaGGCCTTCACTTTGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LHTHRLLFPRFHGVKNTGMVLAF*AFTLLN Trigger: GTTCAGCAAAGTGAAGGCCAAGAATGCCAGAACCAT...CCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | TGCTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGCCCAGCTCCTTCATaGCCTCTTGAAACTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: CCTHIVYYFLDFMVLKTRGPAPS*PLETVE Trigger: TTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCC...CCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008957.13 |
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| CDS-3UTR CAA 90 bp | CTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGGAGTTTAAAAACACCTaGCAAAGCCTCATCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LHTHRLLFPRFHGVKNTGEFKNT*QSLIWV Trigger: AACCCAGATGAGGCTTTGCAAGGTGTTTTTAAACTC...CCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | ACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGTTGTTGGTAATTTCCTaGCTGCTGCTGGATGATTCT | + |
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Preference number: 5 (lower is better) Translates to: THIVYYFLDFMVLKTRGQLLVIS*LLLDDS Trigger: AGAATCATCCAGCAGCAGCAAGGAAATTACCAACAA...CTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAATTGTTGGTAATTTCCTaGCTGCTGCTGGATGATTCT | + |
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Preference number: 5 (lower is better) Translates to: HIVYYFLDFMVLKTRGQELLVIS*LLLDDS Trigger: AGAATCATCCAGCAGCAGCAAGGAAATTACCAACAA...TTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAATTGGAGAAGTTCTTGTaGGTAATTTCCTTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: HIVYYFLDFMVLKTRGQELEKFL*VISLLL Trigger: CAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAA...TTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACTTGGAGAAGTTCTTGTaGGTAATTTCCTTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNLEKFL*VISLLL Trigger: CAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAA...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | CATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGGGTCAGGAAACGAGTTTAAAAACACCTaGCAAAGCCTCATCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: HRLLFPRFHGVKNTGSGNEFKNT*QSLIWV Trigger: AACCCAGATGAGGCTTTGCAAGGTGTTTTTAAACTC...GTTTCCTGACCCCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS-3UTR CAA 90 bp | TGCTGCACACACATCGTTTATTATTTCCTAGATTTCATGGTGTTAAAAACACGGAGTTTGGAGAAGTTCTaGTTGGTAATTTCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CCTHIVYYFLDFMVLKTRSLEKF*LVISLL Trigger: CAGCAAGGAAATTACCAACAAGAACTTCTCCAAACT...CCGTGTTTTTAACACCATGAAATCTAGGAAATAATAAACGATGTGTGTGCAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008957.13 |
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| CDS TCA 72 bp | GGTGTCTGTCAACCGGTCTACTCCACCCACCGTCGTTaGTTTAGTGACACCGGTGGTGGCAGGATCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GVCQPVYSTHRR*FSDTGGGRIFA Trigger: GGCAAAGATCCTGCCACCACCGGTGTCACTAAATCAACGACGGTGGGTGGAGTAGACCGGTTGACAGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS TCA 72 bp | ATAGGTGCCGGCCCCCTTGTAGCCACTCACGTAGCCTaGGTTGTCAGTGGTCTCTTCCCGACCTTCAATACC | + |
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Preference number: 6 (lower is better) Translates to: IGAGPLVATHVA*VVSGLFPTFNT Trigger: GGTATTGAAGGTCGGGAAGAGACCACTGACAACTCAGGCTACGTGAGTGGCTACAAGGGGGCCGGCACCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | CCACCCACCGTCGTTGATTTAGTGACACCGGTGGTGGCAGGATCTTaGCCTTCCATGAGTTTAAAAACACCTTGCAAAGCCTCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPTVVDLVTPVVAGS*PSMSLKTPCKASSG Trigger: CCCAGATGAGGCTTTGCAAGGTGTTTTTAAACTCATGGAAGGCAAAGATCCTGCCACCACCGGTGTCACTAAATCAACGACGGTGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS TCA 72 bp | AAACACCTTGCAAAGCCTCATCTGGGTTCTTCCCCTTaGAGCGCTTTTGGCCCAGCTCCTTCATTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KHLAKPHLGSSP*SAFGPAPSLPL Trigger: AAGAGGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGGAAGAACCCAGATGAGGCTTTGCAAGGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | CAAAGCCTCATCTGGGTTCTTCCCCTTGAAGCGCTTTaGGCCCAGCTCCTTCATTGCCTCTTGAAACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QSLIWVLPLEAL*AQLLHCLLKLL Trigger: CAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGGAAGAACCCAGATGAGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS GCA 72 bp | CTTCCCCTTGAAGCGCTTTTGGCCCAGCTCCTTCATTaGCTCTTGAAACTGTTGAAAGTTGATGGTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LPLEALLAQLLH*LLKLLKVDGSG Trigger: GCCAGAACCATCAACTTTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS GCA 72 bp | GCAGGATCTTTGCCTTCCATGAGTTTAAAAACACCTTaGAAAGCCTCATCTGGGTTCTTCCCCTTGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: AGSLPSMSLKTP*KASSGFFPLKR Trigger: GCGCTTCAAGGGGAAGAACCCAGATGAGGCTTTGCAAGGTGTTTTTAAACTCATGGAAGGCAAAGATCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | GGCAGGATCTTTGCCTTCCATGAGTTTAAAAACACCTaGCAAAGCCTCATCTGGGTTCTTCCCCTTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: GRIFAFHEFKNT*QSLIWVLPLEA Trigger: CGCTTCAAGGGGAAGAACCCAGATGAGGCTTTGCAAGGTGTTTTTAAACTCATGGAAGGCAAAGATCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | AACACCTTGCAAAGCCTCATCTGGGTTCTTCCCCTTGAAGCGCTTTaGGCCCAGCTCCTTCATTGCCTCTTGAAACTGTTGAAAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: NTLQSLIWVLPLEAL*AQLLHCLLKLLKVD Trigger: ATCAACTTTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAGGGGAAGAACCCAGATGAGGCTTTGCAAGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | CTTGAAGCGCTTTTGGCCCAGCTCCTTCATTGCCTCTTGAAACTGTaGAAAGTTGATGGTTCTGGCATTCTTGGCCTTCACTTTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LEALLAQLLHCLLKL*KVDGSGILGLHFAE Trigger: TTCAGCAAAGTGAAGGCCAAGAATGCCAGAACCATCAACTTTCAACAGTTTCAAGAGGCAATGAAGGAGCTGGGCCAAAAGCGCTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | GTCGTTGATTTAGTGACACCGGTGGTGGCAGGATCTTaGCCTTCCATGAGTTTAAAAACACCTTGCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VVDLVTPVVAGS*PSMSLKTPCKA Trigger: GGCTTTGCAAGGTGTTTTTAAACTCATGGAAGGCAAAGATCCTGCCACCACCGGTGTCACTAAATCAACGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS TCA 72 bp | TGTCCACATCTGTGGAGGTCACTGCCTTGCCATCCATaGTATCACAGTCTTTACAGAGTTTGGAGAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: CPHLWRSLPCHP*YHSLYRVWRSS Trigger: AGAACTTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGGCAAGGCAGTGACCTCCACAGATGTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS GCA 72 bp | TTTGCTGAACACAATGTCCACATCTGTGGAGGTCACTaGCTTGCCATCCATGATATCACAGTCTTTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: FAEHNVHICGGH*LAIHDITVFTE Trigger: CTCTGTAAAGACTGTGATATCATGGATGGCAAGGCAGTGACCTCCACAGATGTGGACATTGTGTTCAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | GAGGTCACTGCCTTGCCATCCATGATATCACAGTCTTTACAGAGTTaGGAGAAGTTCTTGTTGGTAATTTCCTTGCTGCTGCTGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: EVTALPSMISQSLQS*EKFLLVISLLLLDD Trigger: ATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGGCAAGGCAGTGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | CCATCCATGATATCACAGTCTTTACAGAGTTTGGAGAAGTTCTTGTaGGTAATTTCCTTGCTGCTGCTGGATGATTCTCCAAAGACAGCG | + |
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Preference number: 6 (lower is better) Translates to: PSMISQSLQSLEKFL*VISLLLLDDSPKTA Trigger: CGCTGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | GCCTTGCCATCCATGATATCACAGTCTTTACAGAGTTaGGAGAAGTTCTTGTTGGTAATTTCCTTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALPSMISQSLQS*EKFLLVISLLL Trigger: CAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGGCAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | TCACAGTCTTTACAGAGTTTGGAGAAGTTCTTGTTGGTAATTTCCTaGCTGCTGCTGGATGATTCTCCAAAGACAGCGAATCGATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SQSLQSLEKFLLVIS*LLLDDSPKTANRWN Trigger: ATTCCATCGATTCGCTGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | TTACAGAGTTTGGAGAAGTTCTTGTTGGTAATTTCCTaGCTGCTGCTGGATGATTCTCCAAAGACAGCGAAT | + |
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Preference number: 6 (lower is better) Translates to: LQSLEKFLLVIS*LLLDDSPKTAN Trigger: ATTCGCTGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 90 bp | TTGCCATCCATGATATCACAGTCTTTACAGAGTTTGGAGAAGTTCTaGTTGGTAATTTCCTTGCTGCTGCTGGATGATTCTCCAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LPSMISQSLQSLEKF*LVISLLLLDDSPKT Trigger: TGTCTTTGGAGAATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGATATCATGGATGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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| CDS CAA 72 bp | ATGATATCACAGTCTTTACAGAGTTTGGAGAAGTTCTaGTTGGTAATTTCCTTGCTGCTGCTGGATGATTCT | + |
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Preference number: 6 (lower is better) Translates to: MISQSLQSLEKF*LVISLLLLDDS Trigger: AGAATCATCCAGCAGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTGTGATATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008957.13 ENSMUST00000177625.2 |
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