Pregenerated sensors for TPPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021573Ensembl transcript IDs: ENSMUST00000022057.9
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTGCGAGTGGGTCTTGGCTCAGGGCAGGCACCTGTCAACTCCCTaGGACAGACTACAGGGAGGTGGCAGAACTGTTGTGCAGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LCEWVLAQGRHLSTP*DRLQGGGRTVVQPS Trigger: ACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | GGCAGTAGAAAAGAGCATCCTCAGAGCAGGAGACTGCCAGCCACATaGGGACTAGGGGTTCTGGGTGAGGGTGCAAGAAGTGCAAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GSRKEHPQSRRLPAT*GLGVLGEGARSARV Trigger: GACCCTTGCACTTCTTGCACCCTCACCCAGAACCCCTAGTCCCCATGTGGCTGGCAGTCTCCTGCTCTGAGGATGCTCTTTTCTACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | CCACTTTCCAGCTGTGGACAGGGCAGGTATGTTAGGACAGGACAGTaGATCACGGCCCAAACCTGGGGTCTGAGGGAGAAGTGTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PLSSCGQGRYVRTGQ*ITAQTWGLREKCQS Trigger: GCTTTGACACTTCTCCCTCAGACCCCAGGTTTGGGCCGTGATTCACTGTCCTGTCCTAACATACCTGCCCTGTCCACAGCTGGAAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | TCAGGGCAGGCACCTGTCAACTCCCTGGGACAGACTACAGGGAGGTaGCAGAACTGTTGTGCAGCCCAGTTCAGAACTATCTCCATGTGT | + |
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Preference number: 1 (lower is better) Translates to: SGQAPVNSLGQTTGR*QNCCAAQFRTISMC Trigger: ACACATGGAGATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCCCAGGGAGTTGACAGGTGCCTGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | AAAATGTCCCACCCTCAACACCCATCTGCTCCAGGAAGCATATCCTaGGGCCACTGTGTGTTTTCTAGAAACAAGGCCACACAGTCCACC | + |
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Preference number: 1 (lower is better) Translates to: KMSHPQHPSAPGSIS*GHCVFSRNKATQST Trigger: GGTGGACTGTGTGGCCTTGTTTCTAGAAAACACACAGTGGCCTCAGGATATGCTTCCTGGAGCAGATGGGTGTTGAGGGTGGGACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR GCA 90 bp | GGGCATTGCCCCCACCATCGCCTAGTGGAGGTGCATTCTGAGTTCTaGCCAGTTAAACATAGGAATGTAATGAAGTGCAATGGGTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GHCPHHRLVEVHSEF*PVKHRNVMKCNGCK Trigger: CTTACACCCATTGCACTTCATTACATTCCTATGTTTAACTGGGCAGAACTCAGAATGCACCTCCACTAGGCGATGGTGGGGGCAATGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | ATTAAGGCCCATCTTTTCTCTCTTAGGCTAGTAGGTAGTCTTCTCTaGTGCTGCAGTGAAGCCATGCTCTCTGAACCCCAGAGAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: IKAHLFSLRLVGSLL*CCSEAMLSEPQRGG Trigger: TCCACCTCTCTGGGGTTCAGAGAGCATGGCTTCACTGCAGCACCAGAGAAGACTACCTACTAGCCTAAGAGAGAAAAGATGGGCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | AGTCAGTGTTTGCAGACAGCCTCCAACCTACCTACCATCGTTCCCTaGCACTTAAGACACCATCTGCATGGCTCTTCCCTGCAATTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SQCLQTASNLPTIVP*HLRHHLHGSSLQFF Trigger: GAAAAATTGCAGGGAAGAGCCATGCAGATGGTGTCTTAAGTGTCAGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | CTTTGTTTCCTGGGTCAGCTCACAACAAAGTATGTCTCTGTCTCCTaGGTGTCCCCTCTAGAAATGAAAATGTCACCTCCTGAGTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LCFLGQLTTKYVSVS*VSPLEMKMSPPECH Trigger: GTGACACTCAGGAGGTGACATTTTCATTTCTAGAGGGGACACCCAGGAGACAGAGACATACTTTGTTGTGAGCTGACCCAGGAAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | TCCCTGAAAAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATaGCGTCTGTCTCAATCCTCCCAGCTAGTTCTAATACCAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SLKKNRWQIPYVSVP*RLSQSSQLVLIPKQ Trigger: CTGCTTTGGTATTAGAACTAGCTGGGAGGATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTTTTCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | AGACACCATCTGCATGGCTCTTCCCTGCAATTTTTCCCTTTCTCCTaGATGTCACCTCCAACAGAATGTATTCCTGTATGTCACCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: RHHLHGSSLQFFPFS*MSPPTECIPVCHPL Trigger: TAGAGGGTGACATACAGGAATACATTCTGTTGGAGGTGACATTCAGGAGAAAGGGAAAAATTGCAGGGAAGAGCCATGCAGATGGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR GCA 90 bp | TGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTTTCCTGGAATaGTTTCCTGCTGAGGATCATACCTTTGGGCACTCTGATGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: CVRAIRNAFSVAFLE*FPAEDHTFGHSDGS Trigger: ACTGCCATCAGAGTGCCCAAAGGTATGATCCTCAGCAGGAAAGCATTCCAGGAAAGCAACTGAGAAAGCATTTCTAATGGCTCTTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR GCA 90 bp | CTCGTGTGCCTGTCACCTAATAGCACATGGCCCTGGGTCTTGGTTTaGATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACAC | + |
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Preference number: 1 (lower is better) Translates to: LVCLSPNSTWPWVLV*MLCSFCLFVFIHRH Trigger: GTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACACGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | CCTGTCTCGTGTGCCTGTCACCTAATAGCACATGGCCCTGGGTCTTaGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACA | + |
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Preference number: 1 (lower is better) Translates to: PVSCACHLIAHGPGS*FACCAVFVCLFLFT Trigger: TGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACACGAGACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR GCA 90 bp | TGTGCCTGTCACCTAATAGCACATGGCCCTGGGTCTTGGTTTGCATaGTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAA | + |
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Preference number: 1 (lower is better) Translates to: CACHLIAHGPGSWFA*CAVFVCLFLFTDTE Trigger: TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | TTATTCTTTGCTGTCATAACTCAAAGAAAGCCTGTCTCTGTCTCTTaGGTGTCTTCCCCTGATAGAATGTATCCTTTGTTTCCTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LFFAVITQRKPVSVS*VSSPDRMYPLFPGS Trigger: TGACCCAGGAAACAAAGGATACATTCTATCAGGGGAAGACACTCAAGAGACAGAGACAGGCTTTCTTTGAGTTATGACAGCAAAGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR TCA 90 bp | GAAGAAGAGCAGTTTGGCTCAGTGTTGGAAGGATATTCTGTCTACTaGTGTCTTCACAGTACAGCTAAATTGTCACTCTTGCCATTCTTA | + |
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Preference number: 1 (lower is better) Translates to: EEEQFGSVLEGYSVY*CLHSTAKLSLLPFL Trigger: TAAGAATGGCAAGAGTGACAATTTAGCTGTACTGTGAAGACATCAGTAGACAGAATATCCTTCCAACACTGAGCCAAACTGCTCTTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CCA 90 bp | ATGGTCAGTAGTATGTTGGTGAAGAAGAGCAGTTTGGCTCAGTGTTaGAAGGATATTCTGTCTACTGATGTCTTCACAGTACAGCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: MVSSMLVKKSSLAQC*KDILSTDVFTVQLN Trigger: ATTTAGCTGTACTGTGAAGACATCAGTAGACAGAATATCCTTCCAACACTGAGCCAAACTGCTCTTCTTCACCAACATACTACTGACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CAA 90 bp | TTAAAACAGGCAGCTGAGGCAGCCCAGGGCCTCTGCGAGTGGGTCTaGGCTCAGGGCAGGCACCTGTCAACTCCCTGGGACAGACTACAG | + |
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Preference number: 2 (lower is better) Translates to: LKQAAEAAQGLCEWV*AQGRHLSTPWDRLQ Trigger: CTGTAGTCTGTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGCAGAGGCCCTGGGCTGCCTCAGCTGCCTGTTTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAGTGTTTGCAGACAGCCTCCAACCTACCTACCATCGTTCCCTGACACTACTAGCCTTCCCCTCTaGCCTGGCCCACATGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: RVSVCRQPPTYLPSFPDTTSLPL*PGPHAV Trigger: GACTGCATGTGGGCCAGGGCAGAGGGGAAGGCTAGT...AGTGTCAGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGGCCATCCTGACCTGACAGACAGTCTGAGCAAGTGTGGCTTAGATGTCCACCTGTCAACTCCCTaGGACAGACTACAGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: QQGHPDLTDSLSKCGLDVHLSTP*DRLQGG Trigger: ACCTCCCTGTAGTCTGTCCCAGGGAGTTGACAGGTG...GACATCTAAGCCACACTTGCTCAGACTGTCTGTCAGGTCAGGATGGCCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGACTACAGGGAGGTGGCAGAACTGTTGTGCAGCCCAGTTCAGAACTATCGCGGGCTTGCCACTCTaGGCTTTTCTGTTCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GQTTGRWQNCCAAQFRTIAGLPL*AFLFSP Trigger: AGGACTGAACAGAAAAGCTCAGAGTGGCAAGCCCGC...GATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGACTACAGGGAGGTGGCAGAACTGTTGTGCAGCCCAGTTCAGAACTATCCCTGAGTGTCGCCCCTaGCAGAACCTGTCCTTATTC | + |
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Preference number: 2 (lower is better) Translates to: GQTTGRWQNCCAAQFRTIPECRP*QNLSLF Trigger: GAATAAGGACAGGTTCTGTCAGGGGCGACACTCAGG...GATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CAA 90 bp | GGACTAGGGGTTCTGGGTGAGGGTGCAAGAAGTGCAAGGGTCATTTaGTTTCCCCAGACCAGTGAGGTAAGATTCCAGAAAGGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLGVLGEGARSARVI*FPQTSEVRFQKGGS Trigger: GGAGCCTCCTTTCTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTTGCACCCTCACCCAGAACCCCTAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTGGGTCTTGGCTCAGGGCAGGCACCTGTCAACTCCCTGGGACAGACTACGTGCATTCTGAGTTCTaGCCAGTTAAACATAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ASGSWLRAGTCQLPGTDYVHSEF*PVKHRN Trigger: ATTCCTATGTTTAACTGGGCAGAACTCAGAATGCAC...GTAGTCTGTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAGACTACAGGGAGGTGGCAGAACTGTTGTGCAGCCCAGTTCAGAACTATCAGTTCTGGGTGTTGCTaGGGAACTATATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GQTTGRWQNCCAAQFRTISSGCC*GTIWAG Trigger: GCCTGCCCATATAGTTCCCCAGCAACACCCAGAACT...GATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGGCCATCCTGACCTGACAGACAGTCTGAGCAAGTGTGGCTTAGATGTCTCACCTAATAGCACATaGCCCTGGGTCTTGGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QQGHPDLTDSLSKCGLDVSPNST*PWVLVC Trigger: GCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGA...GACATCTAAGCCACACTTGCTCAGACTGTCTGTCAGGTCAGGATGGCCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAAGTGCAAGGGTCATTTTGTTTCCCCAGACCAGTGAGGTAAGATTCCAGGGATGGGCTGAGTCCTaGCTTCTCTCCTGTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: ARSARVILFPQTSEVRFQGWAES*LLSCGR Trigger: TCTGCCACAGGAGAGAAGTCAGGACTCAGCCCATCC...CTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGACTACAGGGAGGTGGCAGAACTGTTGTGCAGCCCAGTTCAGAACTATCCCTGTCTCTGTCTCTTaGGTGTCTTCCCCTGATAGA | + |
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Preference number: 2 (lower is better) Translates to: GQTTGRWQNCCAAQFRTIPVSVS*VSSPDR Trigger: TCTATCAGGGGAAGACACTCAAGAGACAGAGACAGG...GATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTGGGTCTTGGCTCAGGGCAGGCACCTGTCAACTCCCTGGGACAGACTACGTATTGCATAAAACATaGAGCAGAGACAAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: ASGSWLRAGTCQLPGTDYVLHKT*SRDKHS Trigger: AGAGTGTTTGTCTCTGCTGCATGTTTTATGCAATAC...GTAGTCTGTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCAGTGTTTGCAGACAGCCTCCAACCTACCTACCATCGTTCCCTGACACTGAGAGGTGGATAATGTaGCTATGTGCCATGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RVSVCRQPPTYLPSFPDTERWIM*LCAMAV Trigger: CACTGCCATGGCACATAGTCACATTATCCACCTCTC...AGTGTCAGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | TTCGAGTGTCACGTGCAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGCGCTGGGCGGTCACGTaGAGGTGGACACTTATGTTG | + |
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Preference number: 2 (lower is better) Translates to: FECHVQQNMTLSLQSMSLRWAVT*RWTLML Trigger: CAACATAAGTGTCCACCTTCACGTGACCGCCCAGCG...CAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTGCACGTGACACTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGGGCCATCCTGACCTGACAGACAGTCTGAGCAAGTGTGGCTTAGATGTCAACCTTAGCAGATGCTaGAAATCTTTCTTGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QQGHPDLTDSLSKCGLDVNLSRC*KSFLGL Trigger: TAGGCCCAAGAAAGATTTGCAGCATCTGCTAAGGTT...GACATCTAAGCCACACTTGCTCAGACTGTCTGTCAGGTCAGGATGGCCCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CAA 90 bp | TACCTGAAAATCAAGTGGCCAGTATGGTATGATCCTGGGAGACAGTaGGAAATAGCAGTCCACTTTCCAGCTGTGGACAGGGCAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: YLKIKWPVWYDPGRQ*EIAVHFPAVDRAGM Trigger: CATACCTGCCCTGTCCACAGCTGGAAAGTGGACTGCTATTTCCAACTGTCTCCCAGGATCATACCATACTGGCCACTTGATTTTCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTACCATCGTTCCCTGACACTTAAGACACCATCTGCATGGCTCTTCCCTGCACATGCAGTCACTTCCTaGTGGATTTGTGTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TYHRSLTLKTPSAWLFPAHAVTS*WICVCV Trigger: AACACACACACAAATCCATCAGGAAGTGACTGCATG...TGCAGGGAAGAGCCATGCAGATGGTGTCTTAAGTGTCAGGGAACGATGGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTCAATCTACCTTTGGGCACTCTaGTGGCAGTTCTGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KEQVANTICVCAMASVSIYLWAL*WQFWSS Trigger: AGAGGACCAGAACTGCCATCAGAGTGCCCAAAGGTA...GATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | CATACCTTTGGGCACTCTGATGGCAGTTCTGGTCCTCTACTGCCCAGGACCTATAGAAACCTTAGCAGATaGTGCAAATCTTTCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HTFGHSDGSSGPLLPRTYRNLSR*CKSFLG Trigger: GCCCAAGAAAGATTTGCAGCATCTGCTAAGGTTTCT...ATAGGTCCTGGGCAGTAGAGGACCAGAACTGCCATCAGAGTGCCCAAAGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTATCCTTTGTTTCCTGGGTCAGCTCACAACAAAGTATGTCTCTGTCTCCTGGCTGCAGTGAAGCCATaGTCTCTGAACCCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: MYPLFPGSAHNKVCLCLLAAVKP*SLNPRE Trigger: CTCTCTGGGGTTCAGAGAGCATGGCTTCACTGCAGC...CAGGAGACAGAGACATACTTTGTTGTGAGCTGACCCAGGAAACAAAGGATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | TTAATGCAAAGGAACAATTGCTGTGGGGCTCTTATGAGGATGGTGCATGCCTTTATCACGGCCCAAACCTaGGGTCTGAGGGAGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LMQRNNCCGALMRMVHAFITAQT*GLREKC Trigger: ACACTTCTCCCTCAGACCCCAGGTTTGGGCCGTGAT...AAAGGCATGCACCATCCTCATAAGAGCCCCACAGCAATTGTTCCTTTGCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | CAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGAGTGTCGCCCCTGACTCTCAGTTGCTTTCCTaGAATGCTTTCCTGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: QQNMTLSLQSMSLSVAPDSQLLS*NAFLLR Trigger: CCTCAGCAGGAAAGCATTCCAGGAAAGCAACTGAGA...GTCAGGGGCGACACTCAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CAA 90 bp | TTGGGAGGAAGCCAACCATCCCCATTTTCCTTGAGCTTGTTAACTTaGAACTTTCAGAGAGCCTGCTGTCTGGGAGGTCTGGTATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGGSQPSPFSLSLLT*NFQRACCLGGLVLR Trigger: CCTTAATACCAGACCTCCCAGACAGCAGGCTCTCTGAAAGTTCAAAGTTAACAAGCTCAAGGAAAATGGGGATGGTTGGCTTCCTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | TTCGAGTGTCACGTGCAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGAACTTTCAGAGAGCCTaGTGTCTGGGAGGTCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: FECHVQQNMTLSLQSMSLNFQRA*CLGGLV Trigger: TACCAGACCTCCCAGACAGCAGGCTCTCTGAAAGTT...CAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTGCACGTGACACTCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTCAATCAATAGCACATGGCCCTaGGTCTTGGTTTGCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: KEQVANTICVCAMASVSINSTWP*VLVCML Trigger: CAGCATGCAAACCAAGACCCAGGGCCATGTGCTATT...GATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR CAA 90 bp | CCCAAGATGGCCACACCCCTGAACTGTAAAATGGTCAGTAGTATGTaGGTGAAGAAGAGCAGTTTGGCTCAGTGTTGGAAGGATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: PKMATPLNCKMVSSM*VKKSSLAQCWKDIL Trigger: CAGAATATCCTTCCAACACTGAGCCAAACTGCTCTTCTTCACCAACATACTACTGACCATTTTACAGTTCAGGGGTGTGGCCATCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTACCATCGTTCCCTGACACTTAAGACACCATCTGCATGGCTCTTCCCTGCAAAATGCTTTCTCAGTTaGTTTCCTGGAATGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TYHRSLTLKTPSAWLFPAKCFLS*FPGMLS Trigger: GGAAAGCATTCCAGGAAAGCAACTGAGAAAGCATTT...TGCAGGGAAGAGCCATGCAGATGGTGTCTTAAGTGTCAGGGAACGATGGTAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTCCCTGGGTCTTGGTTTaGATGCTGTGCAGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LKKNRWQIPYVSVPWRLSPWVLV*MLCSFC Trigger: ACAAAAACTGCACAGCATGCAAACCAAGACCCAGGG...AGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTTTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGAAGTGCAAGGGTCATTTTGTTTCCCCAGACCAGTGAGGTAAGATTCCAGACTTCCATTTTCTCTTaGCCTCTCACAGCACAGACT | + |
|
Preference number: 2 (lower is better) Translates to: ARSARVILFPQTSEVRFQTSIFS*PLTAQT Trigger: AGTCTGTGCTGTGAGAGGCCAAGAGAAAATGGAAGT...CTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTTACAAAGTCCAAGCTGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTACTAGGGGTTCTGGGTaGGGGTGCAAGAAGTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLQSPSCVRAIRNAFSVATRGSG*GCKKCK Trigger: CTTGCACTTCTTGCACCCTCACCCAGAACCCCTAGT...AGCAACTGAGAAAGCATTTCTAATGGCTCTTACACAGCTTGGACTTTGTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCGAGTGTCACGTGCAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGCTTGCTGTCTACCTATaGTGTCCAAGCCATGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FECHVQQNMTLSLQSMSLLAVYL*CPSHVK Trigger: TTTTACATGGCTTGGACAGCATAGGTAGACAGCAAG...CAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTGCACGTGACACTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGAGAAGGCTCCATAGAGCTGAAGACACATAATTTTGAGCAAAACACAGTACTCAGCCATGTGCTGTaGTCAAGAAAGATGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PREGSIELKTHNFEQNTVLSHVL*SRKMKG Trigger: CCCTTTCATCTTTCTTGACCACAGCACATGGCTGAG...TACTGTGTTTTGCTCAAAATTATGTGTCTTCAGCTCTATGGAGCCTTCTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAAAGACTGCCAGCCACATaGGGACTAGGGGTTCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: WFACCAVFVCLFLFTDTERLPAT*GLGVLG Trigger: ACCCAGAACCCCTAGTCCCCATGTGGCTGGCAGTCT...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCGAGTGTCACGTGCAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGGTATCCTTTGTTTCCTaGGTCAGCTCACAACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FECHVQQNMTLSLQSMSLVSFVS*VSSQQS Trigger: ACTTTGTTGTGAGCTGACCCAGGAAACAAAGGATAC...CAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTGCACGTGACACTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATGGGACATGGCAGCTTaGTGTTCTGGATCTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WFACCAVFVCLFLFTDTEWDMAA*CSGSPW Trigger: CCAGGGAGATCCAGAACATCAAGCTGCCATGTCCCA...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTTACAAAGTCCAAGCTGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTGTGAGTTCTGGCATCTaGTCTGCTTCTCCTTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: HLQSPSCVRAIRNAFSVAVSSGI*SASPYP Trigger: TGGGTAAGGAGAAGCAGAGCAGATGCCAGAACTCAC...AGCAACTGAGAAAGCATTTCTAATGGCTCTTACACAGCTTGGACTTTGTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATTGTCCAGGCCTGGTCTaGACAAAGTGTCTCAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: GLHAVQFLFVCFYSQTLNCPGLV*TKCLSM Trigger: CATGCTGAGACACTTTGTCCAGACCAGGCCTGGACA...ATTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAAGGCATCTTAGCCCTTTaGACAGAAGGCTTTGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: WFACCAVFVCLFLFTDTEGILAL*TEGFVQ Trigger: CTGGACAAAGCCTTCTGTTCAAAGGGCTAAGATGCC...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 90 bp | TGTTCTGGATCTCCCTGGATCACTCTTGAGACCAAGCATATAGTCTaGTCATTTCTTAAAACAACACTGAAGAAACTTCCAGCTTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: CSGSPWITLETKHIV*SFLKTTLKKLPASY Trigger: GTATGAAGCTGGAAGTTTCTTCAGTGTTGTTTTAAGAAATGACAAGACTATATGCTTGGTCTCAAGAGTGATCCAGGGAGATCCAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTTACAAAGTCCAAGCTGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTAGGAATGTAATGAAGTaGAATGGGTGTAAGTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLQSPSCVRAIRNAFSVARNVMK*NGCKSC Trigger: ACAGGACTTACACCCATTGCACTTCATTACATTCCT...AGCAACTGAGAAAGCATTTCTAATGGCTCTTACACAGCTTGGACTTTGTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 90 bp | CAAATCAAACTGAGGAAAATACACATCTGTTTTGTGCAGCAAAGTTaGATTCAAATCAGTTTCTATGTCGAAAGGGTACACAGATGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QIKLRKIHICFVQQS*IQISFYVERVHRCH Trigger: GTGACATCTGTGTACCCTTTCGACATAGAAACTGATTTGAATCAAACTTTGCTGCACAAAACAGATGTGTATTTTCCTCAGTTTGATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAGCATATAGTCTTGTCATTTCTTAAAACAACACTGAAGAAACTTCCAGCTTACCTGAAAATCAAGTaGCCAGTATGGTATGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TKHIVLSFLKTTLKKLPAYLKIK*PVWYDP Trigger: AGGATCATACCATACTGGCCACTTGATTTTCAGGTA...AGCTGGAAGTTTCTTCAGTGTTGTTTTAAGAAATGACAAGACTATATGCTTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATCTCGGTTGGTTAATATaGATGTGTGCATATGTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: GLHAVQFLFVCFYSQTLNLGWLI*MCAYVY Trigger: ATACACATATGCACACATGCATATTAACCAACCGAG...ATTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAAAAACACAGTATAACTTaGCCTGGTAAAAGCTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: WFACCAVFVCLFLFTDTEKHSIT*PGKSFH Trigger: ATGGAAGCTTTTACCAGGGCAAGTTATACTGTGTTT...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATATAGCTAATTGGTATTaGATAAAACATGCAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GLHAVQFLFVCFYSQTLNIANWY*IKHAAE Trigger: CTCTGCTGCATGTTTTATGCAATACCAATTAGCTAT...ATTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | CAGCTGAGGCAGCCCAGGGCCTCTGCGAGTGGGTCTTaGCTCAGGGCAGGCACCTGTCAACTCCCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QLRQPRASASGS*LRAGTCQLPGT Trigger: TGTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGCAGAGGCCCTGGGCTGCCTCAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | TCATTAAAACAGGCAGCTGAGGCAGCCCAGGGCCTCTaGGAGTGGGTCTTGGCTCAGGGCAGGCACCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLKQAAEAAQGL*EWVLAQGRHLS Trigger: TGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGCAGAGGCCCTGGGCTGCCTCAGCTGCCTGTTTTAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | GGACAGGACAGTGAATCACGGCCCAAACCTGGGGTCTaGGGGAGAAGTGTCAAAGCACCCAGCAGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQDSESRPKPGV*GRSVKAPSRRR Trigger: CCTCCTCCTGCTGGGTGCTTTGACACTTCTCCCTCAGACCCCAGGTTTGGGCCGTGATTCACTGTCCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | CCTTTGGGCACTCTGATGGCAGTTCTGGTCCTCTACTaGCCAGGACCTATGCGGGCTTGCCACTCTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLGTLMAVLVLY*PGPMRACHSEL Trigger: AAGCTCAGAGTGGCAAGCCCGCATAGGTCCTGGGCAGTAGAGGACCAGAACTGCCATCAGAGTGCCCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | GAAACATCTGACCCACTACATGTTGTGGGGACCCTCTaGTGCCTTACTAGCCTTCCCCTCTGCCCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ETSDPLHVVGTL*CLTSLPLCPGP Trigger: TGGGCCAGGGCAGAGGGGAAGGCTAGTAAGGCATCAGAGGGTCCCCACAACATGTAGTGGGTCAGATGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | GCCTTGCGCTCTATAGGAGGGACAGCAGGGCCATCCTaGCCTGACAGACAGTCTGAGCAAGTGTGGCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALRSIGGTAGPS*PDRQSEQVWLR Trigger: TCTAAGCCACACTTGCTCAGACTGTCTGTCAGGTCAGGATGGCCCTGCTGTCCCTCCTATAGAGCGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | AAAGAGCATCCTCAGAGCAGGAGACTGCCAGCCACATaGGGACTAGGGGTTCTGGGTGAGGGTGCAAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KEHPQSRRLPAT*GLGVLGEGARS Trigger: ACTTCTTGCACCCTCACCCAGAACCCCTAGTCCCCATGTGGCTGGCAGTCTCCTGCTCTGAGGATGCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | GTTCTGGTCCTCTACTGCCCAGGACCTATGCGGGCTTaGCACTCTGAGCTTTTCTGTTCAGTCCTGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLVLYCPGPMRA*HSELFCSVLST Trigger: TGTGCTCAGGACTGAACAGAAAAGCTCAGAGTGGCAAGCCCGCATAGGTCCTGGGCAGTAGAGGACCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | GTGTCACCCTCTATGGGAACCTATCCCTGTCTCGTGTaGCTGTCACCTAATAGCACATGGCCCTGGGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSPSMGTYPCLV*LSPNSTWPWVL Trigger: CAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACACGAGACAGGGATAGGTTCCCATAGAGGGTGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | TGTGTGCCAGTAAAACTATTCATTAAAACAGGCAGCTaGGGCAGCCCAGGGCCTCTGCGAGTGGGTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CVPVKLFIKTGS*GSPGPLRVGLG Trigger: GCCAAGACCCACTCGCAGAGGCCCTGGGCTGCCTCAGCTGCCTGTTTTAATGAATAGTTTTACTGGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGAGTGTCACCCTCTATGGGAACCTATCCCTGTCTCGTGTGCCTGTCACCACAGCACAGACTCGGTaGGTTAATATGCATGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLSVTLYGNLSLSRVPVTTAQTR*VNMHVC Trigger: GCACACATGCATATTAACCAACCGAGTCTGTGCTGT...GGTGACAGGCACACGAGACAGGGATAGGTTCCCATAGAGGGTGACACTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCAGTGTTTGCAGACAGCCTCCAACCTACCTACCATCGTTCCCTGACACTACATGGCCCTGGGTCTaGGTTTGCATGCTGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RVSVCRQPPTYLPSFPDTTWPWV*VCMLCS Trigger: ACTGCACAGCATGCAAACCAAGACCCAGGGCCATGT...AGTGTCAGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTACCATCGTTCCCTGACACTTAAGACACCATCTGCATGGCTCTTCCCTGCAATGGGACATGGCAGCTaGATGTTCTGGATCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TYHRSLTLKTPSAWLFPAMGHGS*MFWISL Trigger: CAGGGAGATCCAGAACATCAAGCTGCCATGTCCCAT...TGCAGGGAAGAGCCATGCAGATGGTGTCTTAAGTGTCAGGGAACGATGGTAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAGAAGGCTCCATAGAGCTGAAGACACATAATTTTGAGCAAAACACAGTAGAGGAGGATCGGGCATaGCCCCCACCATCGCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PREGSIELKTHNFEQNTVEEDRA*PPPSPS Trigger: ACTAGGCGATGGTGGGGGCAATGCCCGATCCTCCTC...TACTGTGTTTTGCTCAAAATTATGTGTCTTCAGCTCTATGGAGCCTTCTCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | GGCCTAGCTAAGTGCCATCCTCACACATGGATGGGCTaGGTCCTGACTTCTCTCCTGTGGCAGAAAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLAKCHPHTWMG*VLTSLLWQKKK Trigger: TTTCTTTTTCTGCCACAGGAGAGAAGTCAGGACTCAGCCCATCCATGTGTGAGGATGGCACTTAGCTAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | CACCCTCAACACCCATCTGCTCCAGGAAGCATATCCTaGGGCCACTGTGTGTTTTCTAGAAACAAGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HPQHPSAPGSIS*GHCVFSRNKAT Trigger: TGTGGCCTTGTTTCTAGAAAACACACAGTGGCCTCAGGATATGCTTCCTGGAGCAGATGGGTGTTGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | CTGGGTGTCCCCTCTAGAAATGAAAATGTCACCTCCTaGGTGTCACCCTCTATGGGAACCTATCCCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGVPSRNENVTS*VSPSMGTYPCL Trigger: GAGACAGGGATAGGTTCCCATAGAGGGTGACACTCAGGAGGTGACATTTTCATTTCTAGAGGGGACACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | TCTCTGAACCCCAGAGAGGTGGATAATGTGACTATGTaGCATGGCAGTGGGGAAGATAGCCTTGCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLNPREVDNVTM*HGSGEDSLAVY Trigger: GTAGACAGCAAGGCTATCTTCCCCACTGCCATGGCACATAGTCACATTATCCACCTCTCTGGGGTTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | TTCTCTCTTAGGCTAGTAGGTAGTCTTCTCTGGTGCTaGAGTGAAGCCATGCTCTCTGAACCCCAGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FSLRLVGSLLWC*SEAMLSEPQRG Trigger: ACCTCTCTGGGGTTCAGAGAGCATGGCTTCACTGCAGCACCAGAGAAGACTACCTACTAGCCTAAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | CACTCTCCTGGTCGCTGGGGAACTTCCATTTTCTCTTaGCCTCTCACAGCACAGACTCGGTTGGTTAATATG | + |
|
Preference number: 3 (lower is better) Translates to: HSPGRWGTSIFS*PLTAQTRLVNM Trigger: CATATTAACCAACCGAGTCTGTGCTGTGAGAGGCCAAGAGAAAATGGAAGTTCCCCAGCGACCAGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | TATCCCTGTCTCGTGTGCCTGTCACCTAATAGCACATaGCCCTGGGTCTTGGTTTGCATGCTGTGCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YPCLVCLSPNST*PWVLVCMLCSF Trigger: AAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACACGAGACAGGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | AAGTGCCTAGATAAGGTCAGCGTGAGTTCTGGCATCTaGTCTGCTTCTCCTTACCCAAACCACCCCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KCLDKVSVSSGI*SASPYPNHPLL Trigger: TAAAAGGGGGTGGTTTGGGTAAGGAGAAGCAGAGCAGATGCCAGAACTCACGCTGACCTTATCTAGGCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | CATCTTTTCTCTCTTAGGCTAGTAGGTAGTCTTCTCTaGTGCTGCAGTGAAGCCATGCTCTCTGAACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLFSLRLVGSLL*CCSEAMLSEPQ Trigger: CTGGGGTTCAGAGAGCATGGCTTCACTGCAGCACCAGAGAAGACTACCTACTAGCCTAAGAGAGAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | TGTCTCGTGTGCCTGTCACCTAATAGCACATGGCCCTaGGTCTTGGTTTGCATGCTGTGCAGTTTTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLVCLSPNSTWP*VLVCMLCSFCL Trigger: CAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAGGCACACGAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | GAAATGAAAATGTCACCTCCTGAGTGTCACCCTCTATaGGAACCTATCCCTGTCTCGTGTGCCTGTCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: EMKMSPPECHPL*EPIPVSCACHL Trigger: TAGGTGACAGGCACACGAGACAGGGATAGGTTCCCATAGAGGGTGACACTCAGGAGGTGACATTTTCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGGGCCATCCTGACCTGACAGACAGTCTGAGCAAGTGTGGCTTAGATGTCCACTTCCTGATGGATTaGTGTGTGTGTTCCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QQGHPDLTDSLSKCGLDVHFLMD*CVCSIL Trigger: TAAAATGGAACACACACACAAATCCATCAGGAAGTG...GACATCTAAGCCACACTTGCTCAGACTGTCTGTCAGGTCAGGATGGCCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTCAATCGCCCTGGGTCTTGGTTaGCATGCTGTGCAGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KEQVANTICVCAMASVSIALGLG*HAVQFL Trigger: CAAAAACTGCACAGCATGCAAACCAAGACCCAGGGC...GATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | AAGAAGTGCAAGGGTCATTTTGTTTCCCCAGACCAGTaGGGTAAGATTCCAGAAAGGAGGCTCCACCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KKCKGHFVSPDQ*GKIPERRLHHL Trigger: CAAGTGGTGGAGCCTCCTTTCTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | AAGAAACTTCCAGCTTCATACTCCAAGTCACTCTCCTaGTCGCTGGGGAACTTCCATTTTCTCTTGGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKLPASYSKSLS*SLGNFHFLLAS Trigger: AGAGGCCAAGAGAAAATGGAAGTTCCCCAGCGACCAGGAGAGTGACTTGGAGTATGAAGCTGGAAGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | CTGGGTCAGCTCACAACAAAGTATGTCTCTGTCTCCTaGGTGTCCCCTCTAGAAATGAAAATGTCACCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGQLTTKYVSVS*VSPLEMKMSPP Trigger: AGGAGGTGACATTTTCATTTCTAGAGGGGACACCCAGGAGACAGAGACATACTTTGTTGTGAGCTGACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTACAAAGTCCAAGCTGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTAGGAGGCTCCACCACTaGCCAGGCACAGCAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLQSPSCVRAIRNAFSVARRLHH*PGTANS Trigger: TGAGTTTGCTGTGCCTGGCAAGTGGTGGAGCCTCCT...AGCAACTGAGAAAGCATTTCTAATGGCTCTTACACAGCTTGGACTTTGTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | CCCCACCATCGCCTAGTGGAGGTGCATTCTGAGTTCTaGCCAGTTAAACATAGGAATGTAATGAAGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PHHRLVEVHSEF*PVKHRNVMKCN Trigger: ATTGCACTTCATTACATTCCTATGTTTAACTGGGCAGAACTCAGAATGCACCTCCACTAGGCGATGGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCGAGTGTCACGTGCAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGCACAATGAAGACCACTaGTCTGACATAGTTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FECHVQQNMTLSLQSMSLHNEDH*SDIVLG Trigger: ACCCAGAACTATGTCAGACAAGTGGTCTTCATTGTG...CAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTGCACGTGACACTCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | TCCTTGAGCTTGTTAACTTTGAACTTTCAGAGAGCCTaGTGTCTGGGAGGTCTGGTATTAAGGCCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLLTLNFQRA*CLGGLVLRPIF Trigger: AAAGATGGGCCTTAATACCAGACCTCCCAGACAGCAGGCTCTCTGAAAGTTCAAAGTTAACAAGCTCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | GCCATTAGAAATGCTTTCTCAGTTGCTTTCCTGGAATaGTTTCCTGCTGAGGATCATACCTTTGGGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: AIRNAFSVAFLE*FPAEDHTFGHS Trigger: AGAGTGCCCAAAGGTATGATCCTCAGCAGGAAAGCATTCCAGGAAAGCAACTGAGAAAGCATTTCTAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | AAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATaGCGTCTGTCTCAATCCTCCCAGCTAGTTCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: KNRWQIPYVSVP*RLSQSSQLVLI Trigger: TATTAGAACTAGCTGGGAGGATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | CTGCATGGCTCTTCCCTGCAATTTTTCCCTTTCTCCTaGATGTCACCTCCAACAGAATGTATTCCTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LHGSSLQFFPFS*MSPPTECIPVC Trigger: ACATACAGGAATACATTCTGTTGGAGGTGACATTCAGGAGAAAGGGAAAAATTGCAGGGAAGAGCCATGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | ATAGAAATAAATAGGGGTTCTACTAGAGTCAGTGTTTaGAGACAGCCTCCAACCTACCTACCATCGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IEINRGSTRVSV*RQPPTYLPSFP Trigger: AGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACTCTAGTAGAACCCCTATTTATTTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | TCTTCATCTGGACATCATTCTGGCATCTTAGCCCTTTaGACAGAAGGCTTTGTCCAGGGTTTTCGTACTATT | + |
|
Preference number: 3 (lower is better) Translates to: SSSGHHSGILAL*TEGFVQGFRTI Trigger: AATAGTACGAAAACCCTGGACAAAGCCTTCTGTTCAAAGGGCTAAGATGCCAGAATGATGTCCAGATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | GCTGTCATAACTCAAAGAAAGCCTGTCTCTGTCTCTTaGGTGTCTTCCCCTGATAGAATGTATCCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AVITQRKPVSVS*VSSPDRMYPLF Trigger: AAACAAAGGATACATTCTATCAGGGGAAGACACTCAAGAGACAGAGACAGGCTTTCTTTGAGTTATGACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | CAGTTTGGCTCAGTGTTGGAAGGATATTCTGTCTACTaGTGTCTTCACAGTACAGCTAAATTGTCACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QFGSVLEGYSVY*CLHSTAKLSLL Trigger: CAAGAGTGACAATTTAGCTGTACTGTGAAGACATCAGTAGACAGAATATCCTTCCAACACTGAGCCAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | CTGCAAATCTTTCTTGGGCCTAGTTCTGGTTTCCAGTaGCCTACACTTAGACTTGTGAGAAAAGTTAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQIFLGPSSGFQ*PTLRLVRKVKK Trigger: TTTCTTAACTTTTCTCACAAGTCTAAGTGTAGGGCACTGGAAACCAGAACTAGGCCCAAGAAAGATTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | CACCTAATAGCACATGGCCCTGGGTCTTGGTTTGCATaGTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HLIAHGPGSWFA*CAVFVCLFLFT Trigger: TGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR GCA 72 bp | CTGTCACCTAATAGCACATGGCCCTGGGTCTTGGTTTaGATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: LSPNSTWPWVLV*MLCSFCLFVFI Trigger: AATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCAAGACCCAGGGCCATGTGCTATTAGGTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CCA 72 bp | AGTATGTTGGTGAAGAAGAGCAGTTTGGCTCAGTGTTaGAAGGATATTCTGTCTACTGATGTCTTCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SMLVKKSSLAQC*KDILSTDVFTV Trigger: TACTGTGAAGACATCAGTAGACAGAATATCCTTCCAACACTGAGCCAAACTGCTCTTCTTCACCAACATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATAGTGCAAGGGTCATTTaGTTTCCCCAGACCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLHAVQFLFVCFYSQTLNSARVI*FPQTSE Trigger: CTCACTGGTCTGGGGAAACAAAATGACCCTTGCACT...ATTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATGGCATCTTAGCCCTTaGAACAGAAGGCTTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: WFACCAVFVCLFLFTDTEWHLSP*NRRLCP Trigger: TGGACAAAGCCTTCTGTTCAAAGGGCTAAGATGCCA...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAATTGTGTTCCATTTTACTaGGCTGTGATGGTGGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GLHAVQFLFVCFYSQTLNCVPFY*AVMVAV Trigger: TACTGCCACCATCACAGCCAAGTAAAATGGAACACA...ATTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTACAAAGTCCAAGCTGTGTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTCCATTTTCCTTGAGCTaGTTAACTTTGAACTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLQSPSCVRAIRNAFSVAPFSLS*LTLNFQ Trigger: CTGAAAGTTCAAAGTTAACAAGCTCAAGGAAAATGG...AGCAACTGAGAAAGCATTTCTAATGGCTCTTACACAGCTTGGACTTTGTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR TCA 72 bp | AGAGACAAACACTCTACCTGTGTGTTCAAATCAAACTaGGGAAAATACACATCTGTTTTGTGCAGCAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RDKHSTCVFKSN*GKYTSVLCSKV Trigger: AACTTTGCTGCACAAAACAGATGTGTATTTTCCTCAGTTTGATTTGAACACACAGGTAGAGTGTTTGTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | GCAGCTGAGGCAGCCCAGGGCCTCTGCGAGTGGGTCTaGGCTCAGGGCAGGCACCTGTCAACTCCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAEAAQGLCEWV*AQGRHLSTPWD Trigger: GTCCCAGGGAGTTGACAGGTGCCTGCCCTGAGCCAAGACCCACTCGCAGAGGCCCTGGGCTGCCTCAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGGTCTGAGGGAGAAGTGTCAAAGCACCCAGCAGGAGGAGGATCGGGCACTTAGCAGCCCTGGCTaGGTCTCCTGGGGACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWGLREKCQSTQQEEDRALSSPG*VSWGLG Trigger: CCCAAGTCCCCAGGAGACCCAGCCAGGGCTGCTAAG...TGCCCGATCCTCCTCCTGCTGGGTGCTTTGACACTTCTCCCTCAGACCCCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGGTCTGAGGGAGAAGTGTCAAAGCACCCAGCAGGAGGAGGATCGGGCAAGTGCCTCCTGGAACTaGTCAAAGGTGATGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWGLREKCQSTQQEEDRASASWN*SKVMVL Trigger: CAGGACCATCACCTTTGAGCAGTTCCAGGAGGCACT...TGCCCGATCCTCCTCCTGCTGGGTGCTTTGACACTTCTCCCTCAGACCCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTGAGTGTCACCCTCTATGGGAACCTATCCCTGTCTCGTGTGCCTGTCACCGGTCTCCTGGGGACTTaGGTGGTGTCTTGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVTLYGNLSLSRVPVTGLLGT*VVSCWQ Trigger: CTGCCAACAAGACACCACCCAAGTCCCCAGGAGACC...GGTGACAGGCACACGAGACAGGGATAGGTTCCCATAGAGGGTGACACTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | CTCCCTGGGACAGACTACAGGGAGGTGGCAGAACTGTaGTGCAGCCCAGTTCAGAACTATCTCCATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGTDYREVAEL*CSPVQNYLHVS Trigger: TGACACATGGAGATAGTTCTGAACTGGGCTGCACAACAGTTCTGCCACCTCCCTGTAGTCTGTCCCAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR TCA 90 bp | ACCTACCATCGTTCCCTGACACTTAAGACACCATCTGCATGGCTCTTCCCTGCACGCTGCTCTTATCCTTaGACCGCTTCTTGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYHRSLTLKTPSAWLFPARCSYP*TASWPA Trigger: AGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCG...TGCAGGGAAGAGCCATGCAGATGGTGTCTTAAGTGTCAGGGAACGATGGTAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAGTGTTTGCAGACAGCCTCCAACCTACCTACCATCGTTCCCTGACACTCATCTCCTTTCCTGTTaGCCTGGTGTCCCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVSVCRQPPTYLPSFPDTHLLSC*PGVPMY Trigger: GTACATGGGGACACCAGGGCAACAGGAAAGGAGATG...AGTGTCAGGGAACGATGGTAGGTAGGTTGGAGGCTGTCTGCAAACACTGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | CATACCTTTGGGCACTCTGATGGCAGTTCTGGTCCTCTACTGCCCAGGACCTATTTCCCATCGATCACGTaGCAGTCCTTGCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTFGHSDGSSGPLLPRTYFPSIT*QSLHSF Trigger: AAAACTGTGCAAGGACTGCCACGTGATCGATGGGAA...ATAGGTCCTGGGCAGTAGAGGACCAGAACTGCCATCAGAGTGCCCAAAGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | CAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGAGTGTCGCCCCTGACTCCTCCAGTGCCTCCTaGAACTGCTCAAAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QQNMTLSLQSMSLSVAPDSSSAS*NCSKVM Trigger: CATCACCTTTGAGCAGTTCCAGGAGGCACTGGAGGA...GTCAGGGGCGACACTCAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | CTTTCCTGGAATGCTTTCCTGCTGAGGATCATACCTTaGGGCACTCTGATGGCAGTTCTGGTCCTCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSWNAFLLRIIP*GTLMAVLVLYC Trigger: GCAGTAGAGGACCAGAACTGCCATCAGAGTGCCCAAAGGTATGATCCTCAGCAGGAAAGCATTCCAGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTGGAACTGCTCAAAGGTaGTGGTCCTGCAGGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKKNRWQIPYVSVPWRLSGTAQR*WSCRTF Trigger: GAAAGTCCTGCAGGACCATCACCTTTGAGCAGTTCC...AGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | AGCCAACCATCCCCATTTTCCTTGAGCTTGTTAACTTaGAACTTTCAGAGAGCCTGCTGTCTGGGAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPSPFSLSLLT*NFQRACCLGGL Trigger: CAGACCTCCCAGACAGCAGGCTCTCTGAAAGTTCAAAGTTAACAAGCTCAAGGAAAATGGGGATGGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | GTTCTGGGTGAGGGTGCAAGAAGTGCAAGGGTCATTTaGTTTCCCCAGACCAGTGAGGTAAGATTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGEGARSARVI*FPQTSEVRFQK Trigger: TTTCTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTTGCACCCTCACCCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR TCA 90 bp | ATGTATCCTTTGTTTCCTGGGTCAGCTCACAACAAAGTATGTCTCTGTCTCCTGCAATGTCCACGTCAGTaGCGGTCACATTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MYPLFPGSAHNKVCLCLLQCPRQ*RSHSSH Trigger: ATGGGAAGAATGTGACCGTCACTGACGTGGACATTG...CAGGAGACAGAGACATACTTTGTTGTGAGCTGACCCAGGAAACAAAGGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAGGTGGCAAATACCATATGTGTCTGTGCCATGGCGTCTGTCTCAATCTCACGTGGCAGTCCTTaGACAGTTTTGACCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEQVANTICVCAMASVSISRGSP*TVLTSS Trigger: AGAACTGGTCAAAACTGTGCAAGGACTGCCACGTGA...GATTGAGACAGACGCCATGGCACAGACACATATGGTATTTGCCACCTGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGCCATTAGAAATGCTTTCTCAGTTGCTTTCCTGGAATGCTTTCCTGCTCCTTTCCTGTTGCCCTaGTGTCCCCATGTACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRAIRNAFSVAFLECFPAPFLLP*CPHVLQ Trigger: TTGCAGTACATGGGGACACCAGGGCAACAGGAAAGG...AGCAGGAAAGCATTCCAGGAAAGCAACTGAGAAAGCATTTCTAATGGCTCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | TTGGGAGGAAGCCAACCATCCCCATTTTCCTTGAGCTaGTTAACTTTGAACTTTCAGAGAGCCTGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGSQPSPFSLS*LTLNFQRACCL Trigger: CAGACAGCAGGCTCTCTGAAAGTTCAAAGTTAACAAGCTCAAGGAAAATGGGGATGGTTGGCTTCCTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGAAGGCTCCATAGAGCTGAAGACACATAATTTTGAGCAAAACACAGTATTGCCCTTTCCTGATTaGTCGAAACGCTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PREGSIELKTHNFEQNTVLPFPD*SKRSLW Trigger: CCACAAGGAGCGTTTCGACCAATCAGGAAAGGGCAA...TACTGTGTTTTGCTCAAAATTATGTGTCTTCAGCTCTATGGAGCCTTCTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | AAAATGGTCAGTAGTATGTTGGTGAAGAAGAGCAGTTaGGCTCAGTGTTGGAAGGATATTCTGTCTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KMVSSMLVKKSS*AQCWKDILSTD Trigger: ATCAGTAGACAGAATATCCTTCCAACACTGAGCCAAACTGCTCTTCTTCACCAACATACTACTGACCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | TCTCCCTGGATCACTCTTGAGACCAAGCATATAGTCTaGTCATTTCTTAAAACAACACTGAAGAAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPWITLETKHIV*SFLKTTLKKLP Trigger: TGGAAGTTTCTTCAGTGTTGTTTTAAGAAATGACAAGACTATATGCTTGGTCTCAAGAGTGATCCAGGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| 3UTR CAA 72 bp | CTGAGGAAAATACACATCTGTTTTGTGCAGCAAAGTTaGATTCAAATCAGTTTCTATGTCGAAAGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRKIHICFVQQS*IQISFYVERVH Trigger: GTGTACCCTTTCGACATAGAAACTGATTTGAATCAAACTTTGCTGCACAAAACAGATGTGTATTTTCCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS TCA 90 bp | TGTCCCCATGTACTGCAAACCGCCGGAAGGCCTCCTCCAGGGCACTaGGCTCAGGAGCTGCAGTTGCACCCTCATTGGCACCCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CPHVLQTAGRPPPGH*AQELQLHPHWHPLT Trigger: AGTCAGAGGGTGCCAATGAGGGTGCAACTGCAGCTCCTGAGCTCAGTGCCCTGGAGGAGGCCTTCCGGCGGTTTGCAGTACATGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS GCA 90 bp | CTTGCCATGCATCTCCTTTCCTGTTGCCCTGGTGTCCCCATGTACTaGAAACCGCCGGAAGGCCTCCTCCAGGGCACTGAGCTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAMHLLSCCPGVPMY*KPPEGLLQGTELRS Trigger: GCTCCTGAGCTCAGTGCCCTGGAGGAGGCCTTCCGGCGGTTTGCAGTACATGGGGACACCAGGGCAACAGGAAAGGAGATGCATGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS GCA 90 bp | TTCGTGACGCCAGAGATGACTGGTGCTCGTCCCTCAATGAGCCTGTaGACCTCACGTACAGCCTCCTCGCTGCTCTTATCCTTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: FVTPEMTGARPSMSL*TSRTASSLLLSLNR Trigger: GCGGTTCAAGGATAAGAGCAGCGAGGAGGCTGTACGTGAGGTGCACAGGCTCATTGAGGGACGAGCACCAGTCATCTCTGGCGTCACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS GCA 90 bp | CAGGCACATAGCCTGACTCATCCACCAGGTCCACACGGCCAGCTTTaGCCTTGCCCTTTCCTGATTGGTCGAAACGCTCCTTGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QAHSLTHPPGPHGQL*PCPFLIGRNAPCGN Trigger: GTTCCCACAAGGAGCGTTTCGACCAATCAGGAAAGGGCAAGGGCAAAGCTGGCCGTGTGGACCTGGTGGATGAGTCAGGCTATGTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS GCA 90 bp | CTCGCTGCTCTTATCCTTGAACCGCTTCTTGGCCAGCTCCTCCAGTaGCTCCTGGAACTGCTCAAAGGTGATGGTCCTGCAGGACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAALILEPLLGQLLQ*LLELLKGDGPAGLS Trigger: GGAAAGTCCTGCAGGACCATCACCTTTGAGCAGTTCCAGGAGGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CAA 90 bp | CAACAAAATATGACTCTGTCACTCCAATCCATGTCCCTGAGTGTCGCCCCTGACGGGTCTCCTGGGGACTaGGGTGGTGTCTTGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QQNMTLSLQSMSLSVAPDGSPGD*GGVLLA Trigger: TGCCAACAAGACACCACCCAAGTCCCCAGGAGACCC...GTCAGGGGCGACACTCAGGGACATGGATTGGAGTGACAGAGTCATATTTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGAAGTGCAAGGGTCATTTTGTTTCCCCAGACCAGTGAGGTAAGATTCCAGTCCTTGAACCGCTTCTaGGCCAGCTCCTCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSARVILFPQTSEVRFQSLNRF*ASSSSA Trigger: GGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGA...CTGGAATCTTACCTCACTGGTCTGGGGAAACAAAATGACCCTTGCACTTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
||
| CDS-3UTR CAA 90 bp | CATACCTTTGGGCACTCTGATGGCAGTTCTGGTCCTCTACTGCCCAGGACCTATATCACGTGGCAGTCCTaGCACAGTTTTGACCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTFGHSDGSSGPLLPRTYITWQS*HSFDQF Trigger: GAACTGGTCAAAACTGTGCAAGGACTGCCACGTGAT...ATAGGTCCTGGGCAGTAGAGGACCAGAACTGCCATCAGAGTGCCCAAAGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS-3UTR CAA 90 bp | TTTTACTTGGCTGTGATGGTGGCAGTAGAAAAGAGCATCCTCAGAGCAGGAGACTCCACACGGCCAGCTTaGCCCTTGCCCTTTCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FYLAVMVAVEKSILRAGDSTRPA*PLPFPD Trigger: ATCAGGAAAGGGCAAGGGCAAAGCTGGCCGTGTGGA...GTCTCCTGCTCTGAGGATGCTCTTTTCTACTGCCACCATCACAGCCAAGTAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS-3UTR CAA 90 bp | ACCAAGCATATAGTCTTGTCATTTCTTAAAACAACACTGAAGAAACTTCCAGCTCGGCCAGCTTTGCCCTaGCCCTTTCCTGATTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: TKHIVLSFLKTTLKKLPARPALP*PFPDWS Trigger: CGACCAATCAGGAAAGGGCAAGGGCAAAGCTGGCCG...AGCTGGAAGTTTCTTCAGTGTTGTTTTAAGAAATGACAAGACTATATGCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS-3UTR CAA 90 bp | ACCAAGCATATAGTCTTGTCATTTCTTAAAACAACACTGAAGAAACTTCCAGCTTCGCTGCTCTTATCCTaGAACCGCTTCTTGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TKHIVLSFLKTTLKKLPASLLLS*NRFLAS Trigger: GCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGA...AGCTGGAAGTTTCTTCAGTGTTGTTTTAAGAAATGACAAGACTATATGCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS-3UTR CAA 90 bp | TGGTTTGCATGCTGTGCAGTTTTTGTTTGTTTGTTTTTATTCACAGACACTGAACTGCAGGACTTTCCTTaGATCTTGCTGAAGACAATG | + |
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Preference number: 5 (lower is better) Translates to: WFACCAVFVCLFLFTDTELQDFP*ILLKTM Trigger: CATTGTCTTCAGCAAGATCAAAGGAAAGTCCTGCAG...TTCAGTGTCTGTGAATAAAAACAAACAAACAAAAACTGCACAGCATGCAAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS CAA 90 bp | GCCTCCTCCAGGGCACTGAGCTCAGGAGCTGCAGTTGCACCCTCATaGGCACCCTCTGACTCCAGTGACAACCTCTTAGCAGCCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASSRALSSGAAVAPS*APSDSSDNLLAALA Trigger: AGCCAGGGCTGCTAAGAGGTTGTCACTGGAGTCAGAGGGTGCCAATGAGGGTGCAACTGCAGCTCCTGAGCTCAGTGCCCTGGAGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS GCA 72 bp | CATCTCCTTTCCTGTTGCCCTGGTGTCCCCATGTACTaGAAACCGCCGGAAGGCCTCCTCCAGGGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: HLLSCCPGVPMY*KPPEGLLQGTE Trigger: CTCAGTGCCCTGGAGGAGGCCTTCCGGCGGTTTGCAGTACATGGGGACACCAGGGCAACAGGAAAGGAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS TCA 72 bp | GCACCTCACGTACAGCCTCCTCGCTGCTCTTATCCTTaGACCGCTTCTTGGCCAGCTCCTCCAGTGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: APHVQPPRCSYP*TASWPAPPVPP Trigger: AGGAGGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGAGGAGGCTGTACGTGAGGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS CAA 72 bp | TGCACCTCACGTACAGCCTCCTCGCTGCTCTTATCCTaGAACCGCTTCTTGGCCAGCTCCTCCAGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CTSRTASSLLLS*NRFLASSSSAS Trigger: GGAGGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGAGGAGGCTGTACGTGAGGTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS CAA 90 bp | ATGAGCCTGTGCACCTCACGTACAGCCTCCTCGCTGCTCTTATCCTaGAACCGCTTCTTGGCCAGCTCCTCCAGTGCCTCCTGGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: MSLCTSRTASSLLLS*NRFLASSSSASWNC Trigger: GCAGTTCCAGGAGGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGAGGAGGCTGTACGTGAGGTGCACAGGCTCAT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS GCA 72 bp | CCAGAGATGACTGGTGCTCGTCCCTCAATGAGCCTGTaGACCTCACGTACAGCCTCCTCGCTGCTCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: PEMTGARPSMSL*TSRTASSLLLS Trigger: GGATAAGAGCAGCGAGGAGGCTGTACGTGAGGTGCACAGGCTCATTGAGGGACGAGCACCAGTCATCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS GCA 72 bp | AGCCTGACTCATCCACCAGGTCCACACGGCCAGCTTTaGCCTTGCCCTTTCCTGATTGGTCGAAACGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLTHPPGPHGQL*PCPFLIGRNAP Trigger: AGGAGCGTTTCGACCAATCAGGAAAGGGCAAGGGCAAAGCTGGCCGTGTGGACCTGGTGGATGAGTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS CAA 72 bp | ACAGCCTCCTCGCTGCTCTTATCCTTGAACCGCTTCTaGGCCAGCTCCTCCAGTGCCTCCTGGAACTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TASSLLLSLNRF*ASSSSASWNCS Trigger: TGAGCAGTTCCAGGAGGCACTGGAGGAGCTGGCCAAGAAGCGGTTCAAGGATAAGAGCAGCGAGGAGGCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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| CDS CAA 72 bp | AGGGCACTGAGCTCAGGAGCTGCAGTTGCACCCTCATaGGCACCCTCTGACTCCAGTGACAACCTCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RALSSGAAVAPS*APSDSSDNLLA Trigger: TGCTAAGAGGTTGTCACTGGAGTCAGAGGGTGCCAATGAGGGTGCAACTGCAGCTCCTGAGCTCAGTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022057.9 |
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