Pregenerated sensors for TPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030894Ensembl transcript IDs: ENSMUST00000033184.6, ENSMUST00000210066.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCAGCCTGTCGGACACTCAGCCAGCAAGTCAGAAAGTCCTGGGTaGTCACTGAATCGCAGTTCCGGGCTCCAGCTGCTGAGAGCCACT | + |
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Preference number: 1 (lower is better) Translates to: AQPVGHSASKSESPG*SLNRSSGLQLLRAT Trigger: AGTGGCTCTCAGCAGCTGGAGCCCGGAACTGCGATTCAGTGACCACCCAGGACTTTCTGACTTGCTGGCTGAGTGTCCGACAGGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | AGCAGCTCAGCCTGTCGGACACTCAGCCAGCAAGTCAGAAAGTCCTaGGTGGTCACTGAATCGCAGTTCCGGGCTCCAGCTGCTGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: SSSACRTLSQQVRKS*VVTESQFRAPAAES Trigger: GCTCTCAGCAGCTGGAGCCCGGAACTGCGATTCAGTGACCACCCAGGACTTTCTGACTTGCTGGCTGAGTGTCCGACAGGCTGAGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | GGGCACAGGCCTGGCTATTGTTGGTGGTGCCTGAGCCCACATCTTTaGCTGTCAGGTTGTATCGCTGACGGAGCACAGACGGAGTCACTC | + |
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Preference number: 1 (lower is better) Translates to: GHRPGYCWWCLSPHL*LSGCIADGAQTESL Trigger: GAGTGACTCCGTCTGTGCTCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 90 bp | CTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTGGTGGTGCCTaGGCCCACATCTTTGGCTGTCAGGTTGTATCGCTGACGGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LFQELGTGLAIVGGA*AHIFGCQVVSLTEH Trigger: GTGCTCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 90 bp | TTGGTGGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGCTaGCGGAGCACAGACGGAGTCACTCCCAAGTGCAGGCTAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: LVVPEPTSLAVRLYR*RSTDGVTPKCRLTV Trigger: AACTGTTAGCCTGCACTTGGGAGTGACTCCGTCTGTGCTCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR GCA 90 bp | AGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTGGTGGTaGCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGCTGACGGA | + |
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Preference number: 1 (lower is better) Translates to: STVPGTGHRPGYCWW*LSPHLWLSGCIADG Trigger: TCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | GGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTGGTaGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GSTVPGTGHRPGYCW*CLSPHLWLSGCIAD Trigger: GTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | AGATCCGAGTTATGGAAGTACTGTTCCAGGAACTGGGCACAGGCCTaGCTATTGTTGGTGGTGCCTGAGCCCACATCTTTGGCTGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: RSELWKYCSRNWAQA*LLLVVPEPTSLAVR Trigger: CCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | TATGGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTaGTGGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGCT | + |
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Preference number: 1 (lower is better) Translates to: YGSTVPGTGHRPGYC*WCLSPHLWLSGCIA Trigger: AGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | GCTCGGCCTCGCCCTTGCTTTCCAACAACTTTTGCTACTGAGGCCTaGTGTGTAAAACTGCCACCGAATAGGCGCATGAACTCAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: ARPRPCFPTTFATEA*CVKLPPNRRMNSVR Trigger: TCTGACTGAGTTCATGCGCCTATTCGGTGGCAGTTTTACACACCAGGCCTCAGTAGCAAAAGTTGTTGGAAAGCAAGGGCGAGGCCGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 90 bp | ACCAGGATGGCCTCAAACTCAGAGACTTGCCTGGCCTCTGTCTCCTaGGTGCTGGGATTAAAGGTGTGCATCACCACACTAGCCGATAAA | + |
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Preference number: 1 (lower is better) Translates to: TRMASNSETCLASVS*VLGLKVCITTLADK Trigger: TTTATCGGCTAGTGTGGTGATGCACACCTTTAATCCCAGCACTCAGGAGACAGAGGCCAGGCAAGTCTCTGAGTTTGAGGCCATCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR CCA 90 bp | ATGAACTCAGTCAGATCCGAGTTATGGAAGTACTGTTCCAGGAACTaGGCACAGGCCTGGCTATTGTTGGTGGTGCCTGAGCCCACATCT | + |
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Preference number: 1 (lower is better) Translates to: MNSVRSELWKYCSRN*AQAWLLLVVPEPTS Trigger: AGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCTGACTGAGTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 90 bp | AAACTGCCACCGAATAGGCGCATGAACTCAGTCAGATCCGAGTTATaGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTG | + |
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Preference number: 1 (lower is better) Translates to: KLPPNRRMNSVRSEL*KYCSRNWAQAWLLL Trigger: CAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCTGACTGAGTTCATGCGCCTATTCGGTGGCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 90 bp | GGTGGTAAGCGTTGGGTGGACCTGCTAGTGTCAGTAATGGAAGACTaGACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GGKRWVDLLVSVMED*TFLPCFHISSWKEE Trigger: TTCCTCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACTGACACTAGCAGGTCCACCCAACGCTTACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR TCA 90 bp | TCGATCCCAGCTCGGCCTCGCCCTTGCTTTCCAACAACTTTTGCTACTGAGGCCGCCACTTTTGGACAGTaGGGAGGGTCAGGGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: SIPARPRPCFPTTFATEAATFGQ*GGSGVM Trigger: CATCACCCCTGACCCTCCTCACTGTCCAAAAGTGGC...GGCCTCAGTAGCAAAAGTTGTTGGAAAGCAAGGGCGAGGCCGAGCTGGGATCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTATCGCTGACGGAGCACAGACGGAGTCACTCCCAAGTGCAGGCTAACAGTCCGGGCTCCAGCTGCTaGGAGCCACTTTTGGACAGT | + |
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Preference number: 2 (lower is better) Translates to: VVSLTEHRRSHSQVQANSPGSSC*EPLLDS Trigger: ACTGTCCAAAAGTGGCTCTCAGCAGCTGGAGCCCGG...ACTGTTAGCCTGCACTTGGGAGTGACTCCGTCTGTGCTCCGTCAGCGATACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR CCA 90 bp | TCGATCCCAGCTCGGCCTCGCCCTTGCTTTCCAACAACTTTTGCTACTGAGGCCGCTGAGAGCCACTTTTaGACAGTGAGGAGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SIPARPRPCFPTTFATEAAESHF*TVRRVR Trigger: CCTGACCCTCCTCACTGTCCAAAAGTGGCTCTCAGC...GGCCTCAGTAGCAAAAGTTGTTGGAAAGCAAGGGCGAGGCCGAGCTGGGATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR CCA 90 bp | TCGATCCCAGCTCGGCCTCGCCCTTGCTTTCCAACAACTTTTGCTACTGAGGCCTCAGAAAGTCCTGGGTaGTCACTGAATCGCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SIPARPRPCFPTTFATEASESPG*SLNRSS Trigger: GGAACTGCGATTCAGTGACCACCCAGGACTTTCTGA...GGCCTCAGTAGCAAAAGTTGTTGGAAAGCAAGGGCGAGGCCGAGCTGGGATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CAA 90 bp | TTATGGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATTGTaGGTGGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGC | + |
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Preference number: 2 (lower is better) Translates to: LWKYCSRNWAQAWLL*VVPEPTSLAVRLYR Trigger: GCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CAA 90 bp | GAGTTATGGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGGCTATaGTTGGTGGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: ELWKYCSRNWAQAWL*LVVPEPTSLAVRLY Trigger: ATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCATGAACTCAGTCAGATCCGAGTTATGGAAGTACTGTTCCAGGAACTGGGCCAAGTCAGAAAGTCCTaGGTGGTCACTGAATCGCAG | + |
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Preference number: 2 (lower is better) Translates to: AHELSQIRVMEVLFQELGQVRKS*VVTESQ Trigger: CTGCGATTCAGTGACCACCCAGGACTTTCTGACTTG...GCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCTGACTGAGTTCATGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTGCCACCGAATAGGCGCATGAACTCAGTCAGATCCGAGTTATGGAAGTACGGCTATTGTTGGTGGTaGCTGAGCCCACATCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KLPPNRRMNSVRSELWKYGYCWW*LSPHLW Trigger: CCAAAGATGTGGGCTCAGGCACCACCAACAATAGCC...GTACTTCCATAACTCGGATCTGACTGAGTTCATGCGCCTATTCGGTGGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACCTGTTCACAGCATCTaGGGGTTAGGGAGAAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: QCREKKDKTISQRSHFSEPVHSI*GLGRSY Trigger: ATAGCTTCTCCCTAACCCTCAGATGCTGTGAACAGG...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAATACAGGGAACAGTTCTaGTTTCTCGTCATGGCACGA | + |
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Preference number: 2 (lower is better) Translates to: QCREKKDKTISQRSHFSEYREQF*FLVMAR Trigger: TCGTGCCATGACGAGAAAGCAGAACTGTTCCCTGTA...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGTTTCACATCTCAAGCTaGAAAGAGGAAGGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: KTKRLVKGLTSVNGKANPFHISS*KEEGEM Trigger: CATCTCTCCTTCCTCTTTCCAGCTTGAGATGTGAAA...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGGGAATAACAAGAAACTaGGCCTTCCCTTTTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: GWGETKYAGYSILLRILKGITRN*AFPFST Trigger: TGTACTAAAAGGGAAGGCTCAGTTTCTTGTTATTCC...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAACTAAGAATGGAACAATaGACACAGCATCCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KEVKKMRVKSYRFLACLKLRMEQ*TQHPWS Trigger: ACTCCAGGGATGCTGTGTTCATTGTTCCATTCTTAG...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAAAAGGAGAGATGGGGTTaGGGTGAGACAAAATATGCT | + |
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Preference number: 2 (lower is better) Translates to: KEVKKMRVKSYRFLACLKKERWG*GETKYA Trigger: AGCATATTTTGTCTCACCCCAACCCCATCTCTCCTT...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAAAAGACTGAACCTTCTTaGCCTGCTTTCACATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: KEVKKMRVKSYRFLACLKKTEPS*PAFTSQ Trigger: TTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTT...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR CCA 72 bp | GCCTGTCGGACACTCAGCCAGCAAGTCAGAAAGTCCTaGGTGGTCACTGAATCGCAGTTCCGGGCTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ACRTLSQQVRKS*VVTESQFRAPA Trigger: AGCTGGAGCCCGGAACTGCGATTCAGTGACCACCCAGGACTTTCTGACTTGCTGGCTGAGTGTCCGACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 72 bp | CCTGAGCCCACATCTTTGGCTGTCAGGTTGTATCGCTaGCGGAGCACAGACGGAGTCACTCCCAAGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEPTSLAVRLYR*RSTDGVTPKCR Trigger: CCTGCACTTGGGAGTGACTCCGTCTGTGCTCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 72 bp | ATGAGGGGCCAAGGCCTGGGGAAGCTGGTAGGGATGTaGGGACCTTATAACATGGGTCTTTGTAGGTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: MRGQGLGKLVGM*GPYNMGLCRSP Trigger: GGGGGACCTACAAAGACCCATGTTATAAGGTCCCCACATCCCTACCAGCTTCCCCAGGCCTTGGCCCCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 72 bp | GAACTGGGCACAGGCCTGGCTATTGTTGGTGGTGCCTaGGCCCACATCTTTGGCTGTCAGGTTGTATCGCTG | + |
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Preference number: 3 (lower is better) Translates to: ELGTGLAIVGGA*AHIFGCQVVSL Trigger: CAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR GCA 72 bp | CCAGGAACTGGGCACAGGCCTGGCTATTGTTGGTGGTaGCTGAGCCCACATCTTTGGCTGTCAGGTTGTATC | + |
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Preference number: 3 (lower is better) Translates to: PGTGHRPGYCWW*LSPHLWLSGCI Trigger: GATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 72 bp | CCTGGCTATTGTTGGTGGTGCCTGAGCCCACATCTTTaGCTGTCAGGTTGTATCGCTGACGGAGCACAGACG | + |
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Preference number: 3 (lower is better) Translates to: PGYCWWCLSPHL*LSGCIADGAQT Trigger: CGTCTGTGCTCCGTCAGCGATACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 72 bp | GTTCCAGGAACTGGGCACAGGCCTGGCTATTGTTGGTaGTGCCTGAGCCCACATCTTTGGCTGTCAGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: VPGTGHRPGYCW*CLSPHLWLSGC Trigger: ACAACCTGACAGCCAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR-3UTR CAA 90 bp | GCGCATGAACTCAGTCAGATCCGAGTTATGGAAGTACTGTTCCAGGAACTGGGCCAGGCCTGGCTATTGTaGGTGGTGCCTGAGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: AHELSQIRVMEVLFQELGQAWLL*VVPEPT Trigger: TGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTG...GCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCTGACTGAGTTCATGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 72 bp | CCGAATAGGCGCATGAACTCAGTCAGATCCGAGTTATaGAAGTACTGTTCCAGGAACTGGGCACAGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PNRRMNSVRSEL*KYCSRNWAQAW Trigger: CCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAACTCGGATCTGACTGAGTTCATGCGCCTATTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 72 bp | GCCTCAAACTCAGAGACTTGCCTGGCCTCTGTCTCCTaGGTGCTGGGATTAAAGGTGTGCATCACCACACTA | + |
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Preference number: 3 (lower is better) Translates to: ASNSETCLASVS*VLGLKVCITTL Trigger: TAGTGTGGTGATGCACACCTTTAATCCCAGCACTCAGGAGACAGAGGCCAGGCAAGTCTCTGAGTTTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR CCA 72 bp | TTATGGAAGTACTGTTCCAGGAACTGGGCACAGGCCTaGCTATTGTTGGTGGTGCCTGAGCCCACATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LWKYCSRNWAQA*LLLVVPEPTSL Trigger: CAAAGATGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTACTTCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR TCA 72 bp | CGTTGGGTGGACCTGCTAGTGTCAGTAATGGAAGACTaGACCTTCTTGCCCTGCTTTCACATCTCAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RWVDLLVSVMED*TFLPCFHISSW Trigger: CCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACTGACACTAGCAGGTCCACCCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR CCA 72 bp | CGCCCTTGCTTTCCAACAACTTTTGCTACTGAGGCCTaGTGTGTAAAACTGCCACCGAATAGGCGCATGAAC | + |
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Preference number: 3 (lower is better) Translates to: RPCFPTTFATEA*CVKLPPNRRMN Trigger: GTTCATGCGCCTATTCGGTGGCAGTTTTACACACCAGGCCTCAGTAGCAAAAGTTGTTGGAAAGCAAGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210066.2 |
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| 3UTR CCA 72 bp | TTGAAGGGTTTGCACAAATACATAGACTGCTTGGTTTaGAAGATGAGGGGCTTCGGAAGCCTTTCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LKGLHKYIDCLV*KMRGFGSLSSP Trigger: GGGAGAGGAAAGGCTTCCGAAGCCCCTCATCTTCCAAACCAAGCAGTCTATGTATTTGTGCAAACCCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| 3UTR TCA 72 bp | GTTCAGCAGGGCTTCTATCGAGGAATAACAAGAAACTaGGCCTTCCCTTTTAGTACAGGGAACAGTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VQQGFYRGITRN*AFPFSTGNSSA Trigger: AGCAGAACTGTTCCCTGTACTAAAAGGGAAGGCTCAGTTTCTTGTTATTCCTCGATAGAAGCCCTGCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR GCA 90 bp | CCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGGAAGGAGAGATGGGGTGGATCCGACACAGCCTaGACCAGCTCCGAGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSCPAFTSQAGKRKERWGGSDTA*TSSESL Trigger: AAGACTCTCGGAGCTGGTGCAGGCTGTGTCGGATCC...ACCCCATCTCTCCTTCCTCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR CCA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGACAGGGACACCCAGCCTaGAGGCAGCATCCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SNGRLNLLALLSHLKLERQGHPA*RQHPPL Trigger: CAGCGGTGGATGCTGCCTCCAGGCTGGGTGTCCCTG...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR GCA 90 bp | CCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGGAAGGAGAGATGGGGTGGCTATTGTTGGTGGTaGCTGAGCCCACATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSCPAFTSQAGKRKERWGGYCWW*LSPHLW Trigger: CCAAAGATGTGGGCTCAGGCACCACCAACAATAGCC...ACCCCATCTCTCCTTCCTCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR TCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGGAGGAGGGTCAGGGGTaGTGGTTGAACCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKEEGQG*WLNQLS Trigger: GCTGAGCTGGTTCAACCATCACCCCTGACCCTCCTC...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAAGTCAGGTTGTATCGCTaGCGGAGCACAGACGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEVRLYR*RSTDGV Trigger: GACTCCGTCTGTGCTCCGTCAGCGATACAACCTGAC...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGAGGAGGGCGGCCATTaGGGATTCTGTGCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SNGRLNLLALLSHLKLEREEGGH*GFCAHL Trigger: TAAATGAGCACAGAATCCTCAATGGCCGCCCTCCTC...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR GCA 90 bp | CTTGTTGAGGATCTTGAAGTAGAAGTTTGGAGACCTGAGTTTGATGGCACACAGGCTCGGCCTCGCCCTTaGTTTCCAACAACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVEDLEVEVWRPEFDGTQARPRP*FPTTFA Trigger: AGCAAAAGTTGTTGGAAAGCAAGGGCGAGGCCGAGC...CTGTGTGCCATCAAACTCAGGTCTCCAAACTTCTACTTCAAGATCCTCAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGGCTGAGAGCCACTTTTaGACAGTGAGGAGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTKRLVKGLTSVNGKANPAESHF*TVRRVR Trigger: CCTGACCCTCCTCACTGTCCAAAAGTGGCTCTCAGC...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGATTCCACATCTAGACTaGCCTCGATCCCAGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTKRLVKGLTSVNGKANPIPHLD*PRSQLG Trigger: GCCGAGCTGGGATCGAGGCCAGTCTAGATGTGGAAT...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | CTTGTTGAGGATCTTGAAGTAGAAGTTTGGAGACCTGAGTTTGATGGCACACAGAATTCCCCCAAACACTaGAGTAGAGGCCGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVEDLEVEVWRPEFDGTQNSPKH*SRGRGS Trigger: GGAACCTCGGCCTCTACTCCAGTGTTTGGGGGAATT...CTGTGTGCCATCAAACTCAGGTCTCCAAACTTCTACTTCAAGATCCTCAACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAAGTAGGGCTGGGAAGTTaGGTGTTCCCCAACCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEVGLGS*VFPNLS Trigger: TGACAGGTTGGGGAACACCCAACTTCCCAGCCCTAC...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGGTTTCAGCGCAAAAGTaGGACTCAGCTCTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTKRLVKGLTSVNGKANPVSAQK*DSALPR Trigger: CCGAGGAAGAGCTGAGTCTCACTTTTGCGCTGAAAC...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGATCAGAAAGTCCTGGGTaGTCACTGAATCGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNGRLNLLALLSHLKLERSESPG*SLNRSS Trigger: GGAACTGCGATTCAGTGACCACCCAGGACTTTCTGA...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGACAAGTCAGAAAGTCCTaGGTGGTCACTGAATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNGRLNLLALLSHLKLERQVRKS*VVTESQ Trigger: CTGCGATTCAGTGACCACCCAGGACTTTCTGACTTG...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAATACTGTTCCAGGAACTaGGCACAGGCCTGGCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEYCSRN*AQAWLL Trigger: CAATAGCCAGGCCTGTGCCCAGTTCCTGGAACAGTA...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGCTGGATTTCAAGAACTaGGCCACTGCTTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKLDFKN*ATASSW Trigger: CCAGGAGGAAGCAGTGGCCCAGTTCTTGAAATCCAG...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAACCGGGCTCCAGCTGCTaGGAGCCACTTTTGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEVKKMRVKSYRFLACLKPGSSC*EPLLDS Trigger: ACTGTCCAAAAGTGGCTCTCAGCAGCTGGAGCCCGG...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGCTGAGCCCACATCTTTaGCTGTCAGGTTGTATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKLSPHL*LSGCIA Trigger: AGCGATACAACCTGACAGCCAAAGATGTGGGCTCAG...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGTTTGCTACTGAGGCCTaGTGTGTAAAACTGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KTKRLVKGLTSVNGKANPFATEA*CVKLPP Trigger: CGGTGGCAGTTTTACACACCAGGCCTCAGTAGCAAA...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGCCCAAGTGGAGATATTaGCACCAGCACTCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKPKWRY*HQHSSG Trigger: ACCTGATGAGTGCTGGTGCCAATATCTCCACTTGGG...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGGACTCATGGCAGCCGTaGGTTACATCAAAGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKDSWQP*VTSKSP Trigger: AGGACTCTTTGATGTAACCCACGGCTGCCATGAGTC...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGTTCAGACAGGACTCATaGCAGCCGTGGGTTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKFRQDS*QPWVTS Trigger: TGATGTAACCCACGGCTGCCATGAGTCCTGTCTGAA...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAAGCCACTTTTGGACAGTaGGGAGGGTCAGGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KEVKKMRVKSYRFLACLKATFGQ*GGSGVM Trigger: CATCACCCCTGACCCTCCTCACTGTCCAAAAGTGGC...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACTGGATGGTGGTAGATaGGAGCTGGATTTCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSELDGGR*ELDFKN Trigger: GTTCTTGAAATCCAGCTCTCATCTACCACCATCCAG...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAATACTGTAGACCCAAGTaGAGATATTGGCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEYCRPK*RYWHQH Trigger: GTGCTGGTGCCAATATCTCCACTTGGGTCTACAGTA...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR CCA 90 bp | GGTTGGGGTGAGACAAAATATGCTGGTTATAGCATCTTGTTGAGGATCTTGAAGGTGGTAGATGAGAGCTaGATTTCAAGAACTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGETKYAGYSILLRILKVVDES*ISRTGP Trigger: TGGCCCAGTTCTTGAAATCCAGCTCTCATCTACCAC...CTTCAAGATCCTCAACAAGATGCTATAACCAGCATATTTTGTCTCACCCCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGGTGAAAAAGATGAGAGTTAAGAGTTATAGGTTTCTGGCTTGTTTGAAAAACTGGGCACAGGCCTaGCTATTGTTGGTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEVKKMRVKSYRFLACLKNWAQA*LLLVVP Trigger: AGGCACCACCAACAATAGCCAGGCCTGTGCCCAGTT...TTTCAAACAAGCCAGAAACCTATAACTCTTAACTCTCATCTTTTTCACCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR TCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAATACATGTGGCAAAGATaGCTCATTGCTAAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEYMWQR*LIAKKQ Trigger: CTGCTTCTTAGCAATGAGTCATCTTTGCCACATGTA...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR GCA 90 bp | CAGTGCCGAGAGAAGAAAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACCATTGAGGATTCTGTaGTCATTTATCAAGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCREKKDKTISQRSHFSEPLRIL*SFIKDK Trigger: TTTATCCTTGATAAATGAGCACAGAATCCTCAATGG...TTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTTTCTTCTCTCGGCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS TCA 90 bp | CCAGCTCCGAGAGTCTTTCCAGGTTCCGCTGTTTCAGCGCAAAAGTaGGACTCAGCTCTTCCTCGGGATCCACGCGGCCCAGGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRVFPGSAVSAQK*DSALPRDPRGPGTP Trigger: GGGTGTCCCTGGGCCGCGTGGATCCCGAGGAAGAGCTGAGTCTCACTTTTGCGCTGAAACAGCGGAACCTGGAAAGACTCTCGGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS TCA 90 bp | CCCCAACCTGTCACAGGATCCCAGCCAGGACCAGAGCAGAAACCCTaGCCCTCCACTTCTTCATTCAGACAGGACTCATGGCAGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQPVTGSQPGPEQKP*PSTSSFRQDSWQPW Trigger: CCACGGCTGCCATGAGTCCTGTCTGAATGAAGAAGTGGAGGGTCAGGGTTTCTGCTCTGGTCCTGGCTGGGATCCTGTGACAGGTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS TCA 90 bp | AATCGCAGTTCCGGGCTCCAGCTGCTGAGAGCCACTTTTGGACAGTaGGGAGGGTCAGGGGTGATGGTTGAACCAGCTCAGCTACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRSSGLQLLRATFGQ*GGSGVMVEPAQLHP Trigger: AGGATGTAGCTGAGCTGGTTCAACCATCACCCCTGACCCTCCTCACTGTCCAAAAGTGGCTCTCAGCAGCTGGAGCCCGGAACTGCGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS CCA 90 bp | GTGCCTCATGGCGGCCAGGGCTACTGTAGACCCAAGTGGAGATATTaGCACCAGCACTCATCAGGTATTCCACATCTAGACTGGCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VPHGGQGYCRPKWRY*HQHSSGIPHLDWPR Trigger: TCGAGGCCAGTCTAGATGTGGAATACCTGATGAGTGCTGGTGCCAATATCTCCACTTGGGTCTACAGTAGCCCTGGCCGCCATGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS CCA 90 bp | AGGGCTCCTGTGCCTCATGGCGGCCAGGGCTACTGTAGACCCAAGTaGAGATATTGGCACCAGCACTCATCAGGTATTCCACATCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RAPVPHGGQGYCRPK*RYWHQHSSGIPHLD Trigger: GTCTAGATGTGGAATACCTGATGAGTGCTGGTGCCAATATCTCCACTTGGGTCTACAGTAGCCCTGGCCGCCATGAGGCACAGGAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS CCA 90 bp | TGGAGATATTGGCACCAGCACTCATCAGGTATTCCACATCTAGACTaGCCTCGATCCCAGCTCGGCCTCGCCCTTGCTTTCCAACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: WRYWHQHSSGIPHLD*PRSQLGLALAFQQL Trigger: AAGTTGTTGGAAAGCAAGGGCGAGGCCGAGCTGGGATCGAGGCCAGTCTAGATGTGGAATACCTGATGAGTGCTGGTGCCAATATCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS-3UTR CAA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGCACAGGCCTGGCTATaGTTGGTGGTGCCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNGRLNLLALLSHLKLERAQAWL*LVVPEP Trigger: GGGCTCAGGCACCACCAACAATAGCCAGGCCTGTGC...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGCAGGCCTGGCTATTGTaGGTGGTGCCTGAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KTKRLVKGLTSVNGKANPQAWLL*VVPEPT Trigger: TGTGGGCTCAGGCACCACCAACAATAGCCAGGCCTG...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | CCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGGAAGGAGAGATGGGGTGGCAAAGATGACTCATaGCTAAGAAGCAGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSCPAFTSQAGKRKERWGGKDDS*LRSRSH Trigger: ATGGCTCCTGCTTCTTAGCAATGAGTCATCTTTGCC...ACCCCATCTCTCCTTCCTCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAGGCCGTGGGAAAACATaGCTGAAGCCTCCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SNGRLNLLALLSHLKLERGRGKT*LKPPPL Trigger: CAGTGGTGGAGGCTTCAGCAATGTTTTCCCACGGCC...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAAGTAGGGCTGGGAAGTaGGGTGTTCCCCAACCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SNGRLNLLALLSHLKLERSRAGK*GVPQPV Trigger: GACAGGTTGGGGAACACCCAACTTCCCAGCCCTACT...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AGTAATGGAAGACTGAACCTTCTTGCCCTGCTTTCACATCTCAAGCTGGAAAGAAAGCTAGGGCGGAACTaGTGTCTTCCGGAGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNGRLNLLALLSHLKLERKLGRN*CLPETD Trigger: GTCTGTCTCCGGAAGACACAAGTTCCGCCCTAGCTT...TCTTTCCAGCTTGAGATGTGAAAGCAGGGCAAGAAGGTTCAGTCTTCCATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGACCCAAGTGGAGATATaGGCACCAGCACTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KTKRLVKGLTSVNGKANPTQVEI*APALIR Trigger: CCTGATGAGTGCTGGTGCCAATATCTCCACTTGGGT...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS-3UTR CAA 90 bp | AAGACAAAACGATTAGTCAAAGGTCTCACTTCAGTGAACGGAAAAGCAAACCCGATGAGGAAAGGATTCTaGAAGGAGGTTCCTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: KTKRLVKGLTSVNGKANPMRKGF*KEVPPT Trigger: AGTTGGAGGAACCTCCTTCAAGAATCCTTTCCTCAT...CGGGTTTGCTTTTCCGTTCACTGAAGTGAGACCTTTGACTAATCGTTTTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS TCA 72 bp | GGTCCGGCTCAGGGTTGTAAGTGCATTTGCCGGCGATaGCGAGAGCAAGGAGCCCTAGGAGGCGGGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPAQGCKCICRR*REQGALGGGLG Trigger: TCCAAGCCCGCCTCCTAGGGCTCCTTGCTCTCGTCATCGCCGGCAAATGCACTTACAACCCTGAGCCGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033184.6 ENSMUST00000210066.2 |
||
| CDS TCA 72 bp | TCCGGGCTCCAGCTGCTGAGAGCCACTTTTGGACAGTaGGGAGGGTCAGGGGTGATGGTTGAACCAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLQLLRATFGQ*GGSGVMVEPAQ Trigger: CTGAGCTGGTTCAACCATCACCCCTGACCCTCCTCACTGTCCAAAAGTGGCTCTCAGCAGCTGGAGCCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS CCA 72 bp | TGGCACCAGCACTCATCAGGTATTCCACATCTAGACTaGCCTCGATCCCAGCTCGGCCTCGCCCTTGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WHQHSSGIPHLD*PRSQLGLALAF Trigger: GAAAGCAAGGGCGAGGCCGAGCTGGGATCGAGGCCAGTCTAGATGTGGAATACCTGATGAGTGCTGGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS TCA 72 bp | AGAGTCTTTCCAGGTTCCGCTGTTTCAGCGCAAAAGTaGGACTCAGCTCTTCCTCGGGATCCACGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVFPGSAVSAQK*DSALPRDPRGP Trigger: TGGGCCGCGTGGATCCCGAGGAAGAGCTGAGTCTCACTTTTGCGCTGAAACAGCGGAACCTGGAAAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS TCA 72 bp | GTCACAGGATCCCAGCCAGGACCAGAGCAGAAACCCTaGCCCTCCACTTCTTCATTCAGACAGGACTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VTGSQPGPEQKP*PSTSSFRQDSW Trigger: CCATGAGTCCTGTCTGAATGAAGAAGTGGAGGGTCAGGGTTTCTGCTCTGGTCCTGGCTGGGATCCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS CCA 72 bp | GTGCCTCATGGCGGCCAGGGCTACTGTAGACCCAAGTaGAGATATTGGCACCAGCACTCATCAGGTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPHGGQGYCRPK*RYWHQHSSGIP Trigger: TGGAATACCTGATGAGTGCTGGTGCCAATATCTCCACTTGGGTCTACAGTAGCCCTGGCCGCCATGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
||
| CDS CCA 72 bp | AAACACTGGAGTAGAGGCCGAGGTTCCAGATACCCATaGAATGGGGACCATGTTGCTGACCACCCAGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: KHWSRGRGSRYP*NGDHVADHPVA Trigger: GGCTACTGGGTGGTCAGCAACATGGTCCCCATTCCATGGGTATCTGGAACCTCGGCCTCTACTCCAGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS TCA 72 bp | CACTTTTGGACAGTGAGGAGGGTCAGGGGTGATGGTTaGACCAGCTCAGCTACATCCTCCAGGGTTAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: HFWTVRRVRGDG*TSSATSSRVRY Trigger: GTACCTAACCCTGGAGGATGTAGCTGAGCTGGTTCAACCATCACCCCTGACCCTCCTCACTGTCCAAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS CCA 72 bp | GGCGGCCAGGGCTACTGTAGACCCAAGTGGAGATATTaGCACCAGCACTCATCAGGTATTCCACATCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: GGQGYCRPKWRY*HQHSSGIPHLD Trigger: GTCTAGATGTGGAATACCTGATGAGTGCTGGTGCCAATATCTCCACTTGGGTCTACAGTAGCCCTGGCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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| CDS TCA 72 bp | TCAGCTACATCCTCCAGGGTTAGGTACTTTCCATATTaGGGAGAGCTAGGATCCGACACAGCCTGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SATSSRVRYFPY*GELGSDTACTS Trigger: GCTGGTGCAGGCTGTGTCGGATCCTAGCTCTCCTCAATATGGAAAGTACCTAACCCTGGAGGATGTAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033184.6 |
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