Pregenerated sensors for TPO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020673Ensembl transcript IDs: ENSMUST00000021005.15, ENSMUST00000155263.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTaGAAACACATGAGATGGAAGCTACTGCAGCCTTGGGCTGATGAT | + |
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Preference number: 1 (lower is better) Translates to: VRRRGISTVWPALLL*KHMRWKLLQPWADD Trigger: ATCATCAGCCCAAGGCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR TCA 90 bp | GAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACATaGGATGGAAGCTACTGCAGCCTTGGGCTGATGATAAGACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: EALARSGLHCSCGNT*DGSYCSLGLMIRLS Trigger: GCTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR TCA 90 bp | CAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGGCAGCTTaGGACTTGCCTTTGCCAATGTCTGGCTCCAAAGCAGTGAGGACC | + |
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Preference number: 1 (lower is better) Translates to: QVSDSNTCHVFAQAA*DLPLPMSGSKAVRT Trigger: GGTCCTCACTGCTTTGGAGCCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 90 bp | ATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACATGAGATaGAAGCTACTGCAGCCTTGGGCTGATGATAAGACTCAGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: ISTVWPALLLWKHMR*KLLQPWADDKTQHL Trigger: CAGATGCTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 90 bp | GATGGAAGCTACTGCAGCCTTGGGCTGATGATAAGACTCAGCATCTaGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: DGSYCSLGLMIRLSI*CPQVSDSNTCHVFA Trigger: GGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTaGATGGCCACAGTTCATGAATCTAGAGCCCACTTTGCAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: NGRELECELMGHTER*MATVHESRAHFAVT Trigger: AGTCACTGCAAAGTGGGCTCTAGATTCATGAACTGTGGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACCACGTGTCATGTCTTTaGCCAGGCAGCTTGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: VRRRGISTVWPALLLWKHHVSCL*PGSLRL Trigger: AAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR-3UTR TCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTGGATGGCCGAGCCCACTTTGCAGTaGCTTGTGGTTATGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: NGRELECELMGHTERWMAEPTLQ*LVVMNK Trigger: CTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTC...GGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAGCCTTTGCCAATGTCTaGCTCCAAAGCAGTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SPVLCGDWTVTRELSVFEAFANV*LQSSED Trigger: GTCCTCACTGCTTTGGAGCCAGACATTGGCAAAGGC...TTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR-3UTR TCA 90 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAATCCTGTGGAAACACATaGGATGGAAGCTACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CYSISSPVLCGDWTVTRESCGNT*DGSYCS Trigger: GCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGA...TTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR-3UTR CCA 90 bp | TCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAATTGTCTAGAAGGATCTaGAGTCTATGCCAGCGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SPVLCGDWTVTRELSVFELSRRI*SLCQRL Trigger: GAGACGCTGGCATAGACTCCAGATCCTTCTAGACAA...TTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR-3UTR TCA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATTTTGCCCAGGCAGCTTaGGACTTGCCTTTGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: VTRELSVFERALLILNEHFAQAA*DLPLPM Trigger: CATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAA...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR-3UTR CCA 90 bp | ACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAAAAGCTACTGCAGCCTTaGGCTGATGATAAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: TVTRELSVFERALLILNEKLLQP*ADDKTQ Trigger: CTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTT...TTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 72 bp | AGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTaGAAACACATGAGATGGAAGCTACTGCAGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RGISTVWPALLL*KHMRWKLLQPW Trigger: CCAAGGCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 72 bp | TTAGCCTTAGTGCGTAGGAGAGGCATTAGCACGGTCTaGCCTGCACTGCTCCTGTGGAAACACATGAGATGG | + |
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Preference number: 3 (lower is better) Translates to: LALVRRRGISTV*PALLLWKHMRW Trigger: CCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCACTAAGGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 72 bp | GTCTGGCCTGCACTGCTCCTGTGGAAACACATGAGATaGAAGCTACTGCAGCCTTGGGCTGATGATAAGACT | + |
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Preference number: 3 (lower is better) Translates to: VWPALLLWKHMR*KLLQPWADDKT Trigger: AGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATCTCATGTGTTTCCACAGGAGCAGTGCAGGCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR CCA 72 bp | GAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTaGATGGCCACAGTTCATGAATCTAGAGCCCACTTT | + |
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Preference number: 3 (lower is better) Translates to: ELECELMGHTER*MATVHESRAHF Trigger: AAAGTGGGCTCTAGATTCATGAACTGTGGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| 3UTR CCA 72 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTaGACCGTAACGAGAGAACTGAGTGTATTTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CYSISSPVLCGD*TVTRELSVFER Trigger: TCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| 3UTR TCA 72 bp | TATGTCTTTAATGCAAGCCTAGAGGAGGAGGATATCTaGGCCAGACCAGCAAAATGCTATAGCATTTCTTCG | + |
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Preference number: 3 (lower is better) Translates to: YVFNASLEEEDI*ARPAKCYSISS Trigger: CGAAGAAATGCTATAGCATTTTGCTGGTCTGGCTCAGATATCCTCCTCCTCTAGGCTTGCATTAAAGACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | TCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCGAAGCCAGGCGGTTGTaGTCGCGCAGCCACAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SASGVLKSLTPTRVMSLPEARRL*SRSHKV Trigger: CACCTTGTGGCTGCGCGAGCACAACCGCCTGGCTTC...GGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACCTGGGGAGCTCTGTGTaGTCCTGGAAGTCAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VRRRGISTVWPALLLWKHLGSSV*SWKSVF Trigger: AAACACTGACTTCCAGGAGCACACAGAGCTCCCCAG...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | AGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGCCTTCTGGGTACATGTaGCCTGCTCCTGGCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SIWCPQVSDSNTCHVFAQPSGYM*PAPGPA Trigger: TGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGG...CTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GATGGAAGCTACTGCAGCCTTGGGCTGATGATAAGACTCAGCATCTGGTGTCCTAGCTGCCCTTGGACTTaGAGCTTGGCTGCTCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: DGSYCSLGLMIRLSIWCPSCPWT*SLAALA Trigger: GGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCT...AGGACACCAGATGCTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACTCCTCATTCATCAGCTaGCCTTGGACTTGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VRRRGISTVWPALLLWKHSSFIS*PWTCSL Trigger: CAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGA...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGTGGGTACATGTGACCTaGTCCTGGCCCTGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWWVHVT*SWPCSL Trigger: CAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCA...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCCAGGAAGCAGGGCGTaGGGTTGGTGCGTGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GDWTVTRELSVFERALLIPGSRA*GWCVGY Trigger: GTACCCCACGCACCAACCGCACGCCCTGCTTCCTGG...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACCTTCCCAATGATACATaGAAACAGAGGACCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VRRRGISTVWPALLLWKHLPNDT*KQRTSA Trigger: CGCACTGGTCCTCTGTTTGCATGTATCATTGGGAAG...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGTTCCCTTGGTGTTCTTaGACTGTGCAGAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWFPWCS*TVQRGG Trigger: GCCACCCCTCTGCACAGTGCAAGAACACCAAGGGAA...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGTTGCTAGGGCTGTGTTaGAGGCTCCCCATCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TRVMSLPRQLETCLCQCLLLGLC*RLPIWG Trigger: ACCCCAGATGGGGAGCCTCCAACACAGCCCTAGCAA...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACCAGGACCCAGGATTTTaGGGATATAATCCCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: VRRRGISTVWPALLLWKHQDPGF*GYNPSW Trigger: CCATGAGGGATTATATCCCCAAAATCCTGGGTCCTG...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGCGTCTCACCAGTGGATaGACTGTGGCATGGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWRLTSG*TVAWPK Trigger: CTTTGGCCATGCCACAGTCCATCCACTGGTGAGACG...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTGGATGGCCATCTTGGTGGCAGCATaGAAGGCAAGCATCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: NGRELECELMGHTERWMAILVAA*KASILT Trigger: TGTCAGGATGCTTGCCTTTCATGCTGCCACCAAGAT...GGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS-3UTR TCA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGTGGTGTCTCCAGGCGTaGCAAGCCACAGAACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TRVMSLPRQLETCLCQCLWCLQA*QATELS Trigger: AGAGAGTTCTGTGGCTTGTCACGCCTGGAGACACCA...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACCTCAGAGCCTTCATCTaGTTCCCAATGATACATGCA | + |
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Preference number: 4 (lower is better) Translates to: VRRRGISTVWPALLLWKHLRAFI*FPMIHA Trigger: TGCATGTATCATTGGGAAGCAGATGAAGGCTCTGAG...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGGCACATAGGGGTCTGTaGACACACACTGGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWAHRGL*THTGSF Trigger: GAAGCTTCCAGTGTGTGTGCACAGACCCCTATGTGC...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGAGTCCCATCCCTTCTaGGTACATGTGACCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TRVMSLPRQLETCLCQCLESHPF*VHVTCS Trigger: GGAGCAGGTCACATGTACCCAGAAGGGATGGGACTC...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | ATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGGCATGGCCAAACCACCAATaGGAAGTGCACCCAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: IWCPQVSDSNTCHVFAQAWPNHQ*EVHPVQ Trigger: TTGCACTGGGTGCACTTCTCATTGGTGGTTTGGCCA...TGCCTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTTGCGGCCTTGTGTGGTaGAATCCCCCTCCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: GDWTVTRELSVFERALLICGLVW*NPPPLT Trigger: AGTCAGGGGAGGGGGATTTCACCACACAAGGCCGCA...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAAACCTCCCCAGAAGGCTaGTGTGCTAGTGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CYSISSPVLCGDWTVTRETSPEG*CASALW Trigger: CCACAGAGCACTAGCACAGCAGCCTTCTGGGGAGGT...TTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | AGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGGTCAAGCCATTCATCTaGTGCCTCGGATTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SIWCPQVSDSNTCHVFAQVKPFI*CLGLAA Trigger: TGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGAC...CTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTGGATGGCCAGCATCCTGACAGGTTaGCAATTGTGCCCAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: NGRELECELMGHTERWMASILTG*QLCPEC Trigger: ACATTCTGGGCACAATTGCCAACCTGTCAGGATGCT...GGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS-3UTR CCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGGTCAGGACATCTTGGTaGCAGCATGAAAGGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWVRTSW*QHERQA Trigger: TGCTTGCCTTTCATGCTGCCACCAAGATGTCCTGAC...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | AGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTCATGTGACCTGCTCCTaGCCCTGCAGCTTGTATCCA | + |
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Preference number: 4 (lower is better) Translates to: SISSPVLCGDWTVTRELSHVTCS*PCSLYP Trigger: TGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATG...ACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | TCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAACACTGTGCAGAGGGGTaGCAAGGTGGGTGTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPVLCGDWTVTRELSVFEHCAEG*QGGCVR Trigger: TCTGACACACCCACCTTGCCACCCCTCTGCACAGTG...TTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGACTGGAAGCTTCCCTTaGTGTTCTTGCACTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWTGSFP*CSCTVQ Trigger: CTGCACAGTGCAAGAACACCAAGGGAAGCTTCCAGT...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGTTTCTGCATCCTGACTaGGTGGTCACTCTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWFLHPD*VVTLSV Trigger: CACAGAGAGAGTGACCACCCAGTCAGGATGCAGAAA...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGATCTTGGTGGCAGCATaGAAGGCAAGCATCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TRVMSLPRQLETCLCQCLILVAA*KASILT Trigger: TGTCAGGATGCTTGCCTTTCATGCTGCCACCAAGAT...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | AGACTCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGAGAAGTGCACCCAGTaGAATGGAGACCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSIWCPQVSDSNTCHVFEKCTQ*NGDPGC Trigger: GCATCCTGGGTCTCCATTGCACTGGGTGCACTTCTC...AAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGAGCATCCTGACAGGTTaGCAATTGTGCCCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSCLCPGSLRLAFANVWSILTG*QLCPEC Trigger: ACATTCTGGGCACAATTGCCAACCTGTCAGGATGCT...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | TCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCGGTGTCAGGACATCTTaGTGGCAGCATGAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASGVLKSLTPTRVMSLPGVRTS*WQHERQ Trigger: TTGCCTTTCATGCTGCCACCAAGATGTCCTGACACC...GGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGGCAAGCTCTGTGTGCTCCTaGAAGTCAGTGTTTAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IWCPQVSDSNTCHVFAQASSVCS*KSVFSR Trigger: ACGGCTAAACACTGACTTCCAGGAGCACACAGAGCT...TGCCTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | AGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTTCCAAACCACCTTCCTaGATAAGCCTCCAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SISSPVLCGDWTVTRELSSKPPS*ISLQGL Trigger: CAGACCCTGGAGGCTTATCCAGGAAGGTGGTTTGGA...ACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| 3UTR CAA 72 bp | GTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTaGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLKSLTPTRVMS*PRQLETCLCQC Trigger: ACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTGGATGGCCGGACTTCCCTTTTCTTaGGGTTTCTTTTCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGRELECELMGHTERWMAGLPFS*GFFSWC Trigger: ACACCATGAAAAGAAACCTCAAGAAAAGGGAAGTCC...GGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS-3UTR TCA 90 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAAACTCTTTCTGCATCCTaGCTGGGTGGTCACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CYSISSPVLCGDWTVTRETLSAS*LGGHSL Trigger: GAGAGAGTGACCACCCAGTCAGGATGCAGAAAGAGT...TTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGTTCCATAATCTCTGCTaGTCGGGAAATAGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRVMSLPRQLETCLCQCLFHNLC*SGNSPT Trigger: AGTGGGGCTATTTCCCGAGCAGCAGAGATTATGGAA...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | TCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCACCCGAGGTAGTGAATaGTTTTCTAGTTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASGVLKSLTPTRVMSLPTRGSE*FSSSCL Trigger: GAGGCAGGAACTAGAAAAGCATTCACTACCTCGGGT...GGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | AAATGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGATGGTCCACCATGAGCTaGCTCGTTTCCACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KCYSISSPVLCGDWTVTRWSTMS*LVSTAL Trigger: CAGTGCTGTGGAAACGAGCCAGCTCATGGTGGACCA...TCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | GGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGATTCTCGGGAAGCAAGGATTTTaGTTCTCACAGGTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGVYASVSQDFQAYVILGKQGF*FSQVSW Trigger: CCAGCTGACCTGTGAGAACCAAAATCCTTGCTTCCC...GAGAATCACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | GGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGATTCTCAGCGAAAGGCAGCAGTaGAGAAGATGTTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGVYASVSQDFQAYVILSERQQ*RRCWTQ Trigger: CTGTGTCCAACATCTTCTCCACTGCTGCCTTTCGCT...GAGAATCACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR TCA 90 bp | GGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGATTCTCATCCGTGGAGAACTGTaGCTGTTCACGTTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVYASVSQDFQAYVILIRGEL*LFTFHD Trigger: GTCATGAAACGTGAACAGTCACAGTTCTCCACGGAT...GAGAATCACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | ACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACAAACAGAGGACCAGTaGGGGCCCCCGGCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TVTRELSVFERALLILNEQTEDQ*GPPART Trigger: AGTTCTTGCCGGGGGCCCGCACTGGTCCTCTGTTTG...TTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | GGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGATTCTCCCAGACTCTTCACAGTaGACAAAGTTCCCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVYASVSQDFQAYVILPDSSQ*TKFPLS Trigger: GGACAATGGGAACTTTGTGCACTGTGAAGAGTCTGG...GAGAATCACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | ATGAACATGAACTTGTCTAGAAGGATCTGGAGTCTATGCCAGCGTCTCTCAGGATGGAGGCTCCCCATCTaGGGTGATCTCTATTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNMNLSRRIWSLCQRLSGWRLPI*GDLYCC Trigger: GCAACAATAGAGATCACCCCAGATGGGGAGCCTCCA...TCCTGAGAGACGCTGGCATAGACTCCAGATCCTTCTAGACAAGTTCATGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTTTCATCAGCTGCCCTTaGACTTGCAGCTTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDWTVTRELSVFERALLIFISCP*TCSLAA Trigger: AGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAA...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGAGAGCTGGAGTGTGAGCTAATGGGACACACAGAGAGGTGGATGGCCACTGTTCACGTTTCATaGCTTGTATTGATGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGRELECELMGHTERWMATVHVS*LVLMFP Trigger: TGGAAACATCAATACAAGTCATGAAACGTGAACAGT...GGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS-3UTR TCA 90 bp | TGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATCCTCTGCAAGTTCAGTaGTGCCAGATCCAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WTVTRELSVFERALLILNPLQVQ*CQIQGA Trigger: GGCACCTTGGATCTGGCATCACTGAACTTGCAGAGG...ATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR TCA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCAGTGTTGTCACAGATaGCCCGAGGTAGTGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDWTVTRELSVFERALLIQCCHR*PEVVNA Trigger: AGCATTCACTACCTCGGGTCATCTGTGACAACACTG...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGATGGTCCACCATGAGCTaGCTCGTTTCCACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HESRAHFAVTCGYEQVLRWSTMS*LVSTAL Trigger: CAGTGCTGTGGAAACGAGCCAGCTCATGGTGGACCA...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS-3UTR CCA 90 bp | TCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAGGCAGTGGGAAGCCGTaGTATAAGAAATTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVLCGDWTVTRELSVFEGSGKP*YKKLGF Trigger: GAACCCTAATTTCTTATACCACGGCTTCCCACTGCC...TTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | ATGAACATGAACTTGTCTAGAAGGATCTGGAGTCTATGCCAGCGTCTCTCAGGATGCTTCTGTTGGCAATaGCCTTGTTCAGCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNMNLSRRIWSLCQRLSGCFCWQ*PCSAQL Trigger: CAGCTGAGCTGAACAAGGCCATTGCCAACAGAAGCA...TCCTGAGAGACGCTGGCATAGACTCCAGATCCTTCTAGACAAGTTCATGTTCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CCAGACCAGCAAAATGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGAATTGTCCACCTCCTCTaGGAAGACACACTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PDQQNAIAFLRLCFVVTGIVHLL*EDTLVI Trigger: GATGACAAGTGTGTCTTCCCAGAGGAGGTGGACAAT...TCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCATTTTGCTGGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | ATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTGCCCAGGCATGCAGCTTGTATCCATaGAAACAGGAGTATACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWCPQVSDSNTCHVFAQACSLYP*KQEYTS Trigger: GCTTGTATACTCCTGTTTCCATGGATACAAGCTGCA...TGCCTGGGCAAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTTCTGTGCACACACACTaGAAGCTTCCCTTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDWTVTRELSVFERALLISVHTH*KLPLVF Trigger: GAACACCAAGGGAAGCTTCCAGTGTGTGTGCACAGA...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | CTAGAAGGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGGGACTTCCCTTTTCTTaGGGTTTCTTTTCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEGSGVYASVSQDFQAYVGLPFS*GFFSWC Trigger: ACACCATGAAAAGAAACCTCAAGAAAAGGGAAGTCC...CACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCCTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | CCAGACCAGCAAAATGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACAGGATTCAAAGTCTTaGGGGAACTTTCCAATACGG | + |
|
Preference number: 4 (lower is better) Translates to: PDQQNAIAFLRLCFVVTGQDSKS*GNFPIR Trigger: CCGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTG...TCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCATTTTGCTGGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR TCA 90 bp | GATGGAAGCTACTGCAGCCTTGGGCTGATGATAAGACTCAGCATCTGGTGTCCTACTGTTCACGTTTCATaGCTTGTATTGATGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGSYCSLGLMIRLSIWCPTVHVS*LVLMFP Trigger: TGGAAACATCAATACAAGTCATGAAACGTGAACAGT...AGGACACCAGATGCTGAGTCTTATCATCAGCCCAAGGCTGCAGTAGCTTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAAAACCACCAGCATTATTaGCATAGCTCCAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSISSPVLCGDWTVTRENHQHY*HSSKCS Trigger: AGAACACTTGGAGCTATGGCAATAATGCTGGTGGTT...TTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CCA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGAGGTGTCAGGACATCTTaGTGGCAGCATGAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HESRAHFAVTCGYEQVLRGVRTS*WQHERQ Trigger: TTGCCTTTCATGCTGCCACCAAGATGTCCTGACACC...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS-3UTR CCA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATCTCATGGTGATGATCTaGTGCAGTGCCCCTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTRELSVFERALLILNEHLMVMI*CSAPTT Trigger: GGTGGTAGGGGCACTGCACCAGATCATCACCATGAG...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CCA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATAGAGGGGTGGCAAGGTaGGTGTGTCAGATCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VTRELSVFERALLILNEHRGVAR*VCQICT Trigger: TGTGCAGATCTGACACACCCACCTTGCCACCCCTCT...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR GCA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGATTCCATAATCTCTGCTaGTCGGGAAATAGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HESRAHFAVTCGYEQVLRFHNLC*SGNSPT Trigger: AGTGGGGCTATTTCCCGAGCAGCAGAGATTATGGAA...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS-3UTR GCA 90 bp | TGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATACAGGTTGGCAATTGTaGCCAGAATGTCTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WTVTRELSVFERALLILNTGWQL*PECLLI Trigger: TATCAGCAGACATTCTGGGCACAATTGCCAACCTGT...ATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATACCACCAATGAGAAGTaGACCCAGTGCAATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTRELSVFERALLILNEHTTNEK*TQCNGD Trigger: GTCTCCATTGCACTGGGTGCACTTCTCATTGGTGGT...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR GCA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGAAACCACCAGCATTATTaGCATAGCTCCAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HESRAHFAVTCGYEQVLRNHQHY*HSSKCS Trigger: AGAACACTTGGAGCTATGGCAATAATGCTGGTGGTT...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS-3UTR TCA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATAGTCCATTATCTTGTTaGCCATGCTTCTGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTRELSVFERALLILNEHSPLSC*PCFCWQ Trigger: TTGCCAACAGAAGCATGGTCAACAAGATAATGGACT...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | GGCGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGCGGTTGGTGCGTaGGGTACCAGGCTCTGGAGCGCAGGCGGCTGTTGCGAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GATVSSQEAGRAVGA*GTRLWSAGGCCEGQ Trigger: CTGCCCTTCGCAACAGCCGCCTGCGCTCCAGAGCCTGGTACCCCACGCACCAACCGCACGCCCTGCTTCCTGGCTGGAGACGGTCGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | CACTGGCGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGCGGTTGGTaGGTGGGGTACCAGGCTCTGGAGCGCAGGCGGCTGTTGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWRDRLQPGSRACGW*VGYQALERRRLLRR Trigger: CCTTCGCAACAGCCGCCTGCGCTCCAGAGCCTGGTACCCCACGCACCAACCGCACGCCCTGCTTCCTGGCTGGAGACGGTCGCGCCAGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | CCTCACTGGCGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGCGGTTaGTGCGTGGGGTACCAGGCTCTGGAGCGCAGGCGGCTGTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PHWRDRLQPGSRACG*CVGYQALERRRLLR Trigger: TCGCAACAGCCGCCTGCGCTCCAGAGCCTGGTACCCCACGCACCAACCGCACGCCCTGCTTCCTGGCTGGAGACGGTCGCGCCAGTGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | CGCGCAGCCACAAGGTGTGTACCGCTGCCAGGGCAGGGACCTCACTaGCGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGCGGTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAATRCVPLPGQGPH*RDRLQPGSRACGWC Trigger: GCACCAACCGCACGCCCTGCTTCCTGGCTGGAGACGGTCGCGCCAGTGAGGTCCCTGCCCTGGCAGCGGTACACACCTTGTGGCTGCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | CTCCAGTGCTTGTTAATGGCCTTGAAGGCCGAAGCCAGGCGGTTGTaGTCGCGCAGCCACAAGGTGTGTACCGCTGCCAGGGCAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LQCLLMALKAEARRL*SRSHKVCTAARAGT Trigger: GGTCCCTGCCCTGGCAGCGGTACACACCTTGTGGCTGCGCGAGCACAACCGCCTGGCTTCGGCCTTCAAGGCCATTAACAAGCACTGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 90 bp | TTGCGAAGGGCAGGTAGGCACGGCCAGCATCTAGGTGGAGAGTGTTaGCACGCAGCAGTCCTGCCGAGCTGCTCCAGTTGCGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRAGRHGQHLGGEC*HAAVLPSCSSCAAA Trigger: AGCAGCTGCGCAACTGGAGCAGCTCGGCAGGACTGCTGCGTGTCAACACTCTCCACCTAGATGCTGGCCGTGCCTACCTGCCCTTCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | GATTGGCTGCAGACAGGTTGCCAAAGAGAGCACCTTGGTCCCCAGTaGCACAAGCGGCGGAGGAGCGGTAGAAAGGCAGGCATGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DWLQTGCQREHLGPQ*HKRRRSGRKAGMQW Trigger: CCACTGCATGCCTGCCTTTCTACCGCTCCTCCGCCGCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | GTGTTGACACGCAGCAGTCCTGCCGAGCTGCTCCAGTTGCGCAGCTaGTTCTCAACGCCAGGGGAGCTGCCGTACACAGTGGAAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VLTRSSPAELLQLRS*FSTPGELPYTVEAS Trigger: TGATGCTTCCACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGCTGCGCAACTGGAGCAGCTCGGCAGGACTGCTGCGTGTCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | AGGTCAAGCCATTCATCTGCTGCCTCGGATTGGCTGCAGACAGGTTaGCAAAGAGAGCACCTTGGTCCCCAGTGCCACAAGCGGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSHSSAASDWLQTG*QREHLGPQCHKRRR Trigger: CCTCCGCCGCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GTGCGTAGGAGAGGCATTAGCACGGTCTGGCCTGCACTGCTCCTGTGGAAACACGCCAAAGAGAGCACCTaGGTCCCCAGTGCCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRRRGISTVWPALLLWKHAKEST*VPSATS Trigger: GCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGC...GTGTTTCCACAGGAGCAGTGCAGGCCAGACCGTGCTAATGCCTCTCCTACGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | CCGAGCTGCTCCAGTTGCGCAGCTGCTTCTCAACGCCAGGGGAGCTaGCGTACACAGTGGAAGCATCAAGGAAGGAGGTCAAGCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSCSSCAAASQRQGS*RTQWKHQGRRSSHS Trigger: TGAATGGCTTGACCTCCTTCCTTGATGCTTCCACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGCTGCGCAACTGGAGCAGCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | AAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTTaGAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLSVSSSFISCPWT*SLAALARRPLTIGS Trigger: GGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | TTAGACAGCACGAAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTaGCCTTGGACTTGCAGCTTGGCTGCTCTCGCCAGGAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDSTKSLSVSSSFIS*PWTCSLAALARRPL Trigger: GAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTCGTGCTGTCTAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | CAGTGCCACAAGCGGCGGAGGAGCGGTAGAAAGGCAGGCATGCAGTaGTCCCTGAGGAGTTTGAGGGAAGCTGTATGGGGAAGCAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QCHKRRRSGRKAGMQ*SLRSLREAVWGSKD Trigger: ATCCTTGCTTCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCACTGCATGCCTGCCTTTCTACCGCTCCTCCGCCGCTTGTGGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | AGCACGAAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTaGACTTGCAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCACTATC | + |
|
Preference number: 5 (lower is better) Translates to: STKSLSVSSSFISCP*TCSLAALARRPLTI Trigger: GATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTCGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGCCGAAGCCAGGCGGTaGTGCTCGCGCAGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRVMSLPRQLETCLCQCLAEARR*CSRSHK Trigger: CTTGTGGCTGCGCGAGCACAACCGCCTGGCTTCGGC...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | GGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTTGCAGCTTGGCTaGTCTCGCCAGGAGGCCTCTCACTATCGGATCCAAACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQLLIHQLPLDLQLG*SRQEASHYRIQTTF Trigger: GAAGGTGGTTTGGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | AGTTGCGCAGCTGCTTCTCAACGCCAGGGGAGCTGCCGTACACAGTaGAAGCATCAAGGAAGGAGGTCAAGCCATTCATCTGCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCAAASQRQGSCRTQ*KHQGRRSSHSSAAS Trigger: CGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTTCCACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGCTGCGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | TCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTTGCAGCTTaGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGATCCAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRSAPHSSAALGLAA*LLSPGGLSLSDPNH Trigger: GTGGTTTGGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGCAGCTGCCCTTGGACTaGCAGCTTGGCTGCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRVMSLPRQLETCLCQCLQLPLD*QLGCSR Trigger: GCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTG...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 90 bp | CAGAGTACTGGTCATCTTCGGTCACAGCCTCATTGGAAACTTGAATaGGGTGCCTTGTCACTTCCCGTACCGGGGGCAGTGGGAAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QSTGHLRSQPHWKLE*GALSLPVPGAVGSR Trigger: ACGGCTTCCCACTGCCCCCGGTACGGGAAGTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCTGTGACCGAAGATGACCAGTACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | ATCAAGGAAGGAGGTCAAGCCATTCATCTGCTGCCTCGGATTGGCTaGAGACAGGTTGCCAAAGAGAGCACCTTGGTCCCCAGTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IKEGGQAIHLLPRIG*RQVAKESTLVPSAT Trigger: TGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | GGTCTGAAGAAGACATCACGCAGCTGCAACCTGGGGAGCTCTGTGTaGTCCTGGAAGTCAGTGTTTAGCCGTCTCACCAGTGGATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GLKKTSRSCNLGSSV*SWKSVFSRLTSGWT Trigger: AGTCCATCCACTGGTGAGACGGCTAAACACTGACTTCCAGGAGCACACAGAGCTCCCCAGGTTGCAGCTGCGTGATGTCTTCTTCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | AAGCATCAAGGAAGGAGGTCAAGCCATTCATCTGCTGCCTCGGATTaGCTGCAGACAGGTTGCCAAAGAGAGCACCTTGGTCCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KHQGRRSSHSSAASD*LQTGCQREHLGPQC Trigger: GCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | AAGAAGACATCACGCAGCTGCAACCTGGGGAGCTCTGTGTGCTCCTaGAAGTCAGTGTTTAGCCGTCTCACCAGTGGATGGACTGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KKTSRSCNLGSSVCS*KSVFSRLTSGWTVA Trigger: TGCCACAGTCCATCCACTGGTGAGACGGCTAAACACTGACTTCCAGGAGCACACAGAGCTCCCCAGGTTGCAGCTGCGTGATGTCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | GGAGGTTCGGAGTCCCATCCCTTCTGGGTACATGTGACCTGCTCCTaGCCCTGCAGCTTGTATCCATGGAAACAGGAGTATACAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGSESHPFWVHVTCS*PCSLYPWKQEYTST Trigger: GGTGCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS TCA 90 bp | CTTTACAGACAGGAGGTTCGGAGTCCCATCCCTTCTGGGTACATGTaGCCTGCTCCTGGCCCTGCAGCTTGTATCCATGGAAACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LYRQEVRSPIPSGYM*PAPGPAACIHGNRS Trigger: ACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTGTCTGTAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | TCGGAGTCCCATCCCTTCTGGGTACATGTGACCTGCTCCTGGCCCTaGAGCTTGTATCCATGGAAACAGGAGTATACAAGCACCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SESHPFWVHVTCSWP*SLYPWKQEYTSTSF Trigger: GAAGCTGGTGCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | CAGACAGGAGGTTCGGAGTCCCATCCCTTCTGGGTACATGTGACCTaGTCCTGGCCCTGCAGCTTGTATCCATGGAAACAGGAGTATACA | + |
|
Preference number: 5 (lower is better) Translates to: QTGGSESHPFWVHVT*SWPCSLYPWKQEYT Trigger: TGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | AAGGCAGGCATGCAGTGGTCCCTGAGGAGTTTGAGGGAAGCTGTATaGGGAAGCAAGGATTTTGGTTCTCACAGGTCAGCTGGCAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KAGMQWSLRSLREAV*GSKDFGSHRSAGSR Trigger: TCGACTGCCAGCTGACCTGTGAGAACCAAAATCCTTGCTTCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCACTGCATGCCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CAA 90 bp | AGACTCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTCTTGCTAGGGCTGTGTaGGAGGCTCCCCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSIWCPQVSDSNTCHVFLARAV*EAPHLG Trigger: CCCCAGATGGGGAGCCTCCAACACAGCCCTAGCAAG...AAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | GTGATCTCTATTGTTGCACGCCCCTGTGATGGGCCGGTACTTATTTaGCAGGCAGGTGTCAGGACATCTTGGTGGCAGCATGAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VISIVARPCDGPVLI*QAGVRTSWWQHERQ Trigger: TTGCCTTTCATGCTGCCACCAAGATGTCCTGACACCTGCCTGGCAAATAAGTACCGGCCCATCACAGGGGCGTGCAACAATAGAGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | ACAGTACCTATTGTTGCACGCCCCTGTGATGGGCCGGTACTTATTTaGCAGGCAGGTGTCAGGACATCTTGGTGGCAGCATGAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVPIVARPCDGPVLI*QAGVRTSWWQHERQ Trigger: TTGCCTTTCATGCTGCCACCAAGATGTCCTGACACCTGCCTGGCAAATAAGTACCGGCCCATCACAGGGGCGTGCAACAATAGGTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
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| CDS TCA 90 bp | CAGAAGGCTGCTGTGCTAGTGCTCTGTGGTGTGAGAGCAATGTCATaGTCGATGTACTGTCCCCACACCGGCAGAAAATCAGAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKAAVLVLCGVRAMS*SMYCPHTGRKSEYW Trigger: CCAGTACTCTGATTTTCTGCCGGTGTGGGGACAGTACATCGATCATGACATTGCTCTCACACCACAGAGCACTAGCACAGCAGCCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | GTTCTTGCACTGTGCAGAGGGGTGGCAAGGTGGGTGTGTCAGATCTaGACACTCATTAACATCTTTACAGACAGGAGGTTCGGAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLALCRGVARWVCQI*TLINIFTDRRFGVP Trigger: TGGGACTCCGAACCTCCTGTCTGTAAAGATGTTAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | TTCTGGGTACATGTGACCTGCTCCTGGCCCTGCAGCTTGTATCCATaGAAACAGGAGTATACAAGCACCAGCTTCCCAGACTCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FWVHVTCSWPCSLYP*KQEYTSTSFPDSSQ Trigger: CTGTGAAGAGTCTGGGAAGCTGGTGCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | TCATTAACATCTTTACAGACAGGAGGTTCGGAGTCCCATCCCTTCTaGGTACATGTGACCTGCTCCTGGCCCTGCAGCTTGTATCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTSLQTGGSESHPF*VHVTCSWPCSLYPW Trigger: CCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTGTCTGTAAAGATGTTAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CAA 90 bp | ATGAACATGAACTTGTCTAGAAGGATCTGGAGTCTATGCCAGCGTCTCTCAGGACAGGAGGCAGCCATCTaGCTAGGGCTGTGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MNMNLSRRIWSLCQRLSGQEAAI*LGLCWR Trigger: CCTCCAACACAGCCCTAGCAAGATGGCTGCCTCCTG...TCCTGAGAGACGCTGGCATAGACTCCAGATCCTTCTAGACAAGTTCATGTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CAA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGGCGTCTGTGAAGACATaGGTGTTCTCCCACCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HVSCLCPGSLRLAFANVWASVKT*VFSHQN Trigger: GTTTTGGTGGGAGAACACCAATGTCTTCACAGACGC...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 90 bp | AATCTATGCAGGTCTTCTCATCCTCACCTAGCACATAGGGGTCTGTaGACACACACTGGAAGCTTCCCTTGGTGTTCTTGCACTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLCRSSHPHLAHRGL*THTGSFPWCSCTVQ Trigger: CTGCACAGTGCAAGAACACCAAGGGAAGCTTCCAGTGTGTGTGCACAGACCCCTATGTGCTAGGTGAGGATGAGAAGACCTGCATAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | AGTTCAAGGTCCATGCTCGGGATGTCCTCACAGGATTCAAAGTCTTaGGGGAACTTTCCAATACGGAAGGCATCCACAGGTACTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRSMLGMSSQDSKS*GNFPIRKASTGTLV Trigger: CACCAGAGTACCTGTGGATGCCTTCCGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTGTGAGGACATCCCGAGCATGGACCTTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 90 bp | GAAGCTTCCCTTGGTGTTCTTGCACTGTGCAGAGGGGTGGCAAGGTaGGTGTGTCAGATCTGCACACTCATTAACATCTTTACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EASLGVLALCRGVAR*VCQICTLINIFTDR Trigger: CCTGTCTGTAAAGATGTTAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAACACCAAGGGAAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS-3UTR CAA 90 bp | CACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGGAGCCTCATTGGAAACTaGAATGAGGTGCCTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HVSCLCPGSLRLAFANVWSLIGN*NEVPCH Trigger: GTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCT...CCAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTTGCTTGTTAATGGCCTaGAAGGCCGAAGCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GDWTVTRELSVFERALLICLLMA*KAEARR Trigger: CCGCCTGGCTTCGGCCTTCAAGGCCATTAACAAGCA...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | TCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAATCCTGGCCCTGCAGCTaGTATCCATGGAAACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLCGDWTVTRELSVFESWPCS*YPWKQE Trigger: CTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGA...TTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 90 bp | TCACAGATGACCCGAGGTAGTGAATGCTTTTCTAGTTCCTGCCTCTaGGCGTCTGTGAAGACATTGGTGTTCTCCCACCAAAACCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQMTRGSECFSSSCL*ASVKTLVFSHQNLS Trigger: GGACAGGTTTTGGTGGGAGAACACCAATGTCTTCACAGACGCTCAGAGGCAGGAACTAGAAAAGCATTCACTACCTCGGGTCATCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 90 bp | TGGAAACAGGAGTATACAAGCACCAGCTTCCCAGACTCTTCACAGTaGACAAAGTTCCCATTGTCCACCTCCTCTGGGAAGACACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKQEYTSTSFPDSSQ*TKFPLSTSSGKTHL Trigger: CAAGTGTGTCTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCACTGTGAAGAGTCTGGGAAGCTGGTGCTTGTATACTCCTGTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | ACACACTGGAAGCTTCCCTTGGTGTTCTTGCACTGTGCAGAGGGGTaGCAAGGTGGGTGTGTCAGATCTGCACACTCATTAACATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: THWKLPLVFLHCAEG*QGGCVRSAHSLTSL Trigger: TAAAGATGTTAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAACACCAAGGGAAGCTTCCAGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTTTCAGGCTTATGTGATTCTCGCAGTGGAGAAGATGTaGGACACAGTAGGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GSGVYASVSQDFQAYVILAVEKM*DTVGFT Trigger: TGTGAACCCTACTGTGTCCAACATCTTCTCCACTGC...GAGAATCACATAAGCCTGAAAGTCCTGAGAGACGCTGGCATAGACTCCAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | AGACTCAGCATCTGGTGTCCTCAAGTCTCTGACTCCAACACGTGTCATGTCTTTTGCACAAAGTTCCCATaGTCCACCTCCTCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSIWCPQVSDSNTCHVFCTKFP*STSSGK Trigger: CTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCA...AAAGACATGACACGTGTTGGAGTCAGAGACTTGAGGACACCAGATGCTGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | TGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGACCGTAACGAGAGAACACTGGAAGCTTCCCTaGGTGTTCTTGCACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CYSISSPVLCGDWTVTREHWKLP*VFLHCA Trigger: TGCACAGTGCAAGAACACCAAGGGAAGCTTCCAGTG...TTCTCTCGTTACGGTCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 90 bp | CCCACTGGTGGACTCGGGCAGCTTAAAGAAAGAGAGAAGCTGGGCTaGAGAAAGGACTTCCCTTTTCTTGAGGTTTCTTTTCATGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTGGLGQLKEREKLG*RKDFPFLEVSFHGV Trigger: AACACCATGAAAAGAAACCTCAAGAAAAGGGAAGTCCTTTCTCCAGCCCAGCTTCTCTCTTTCTTTAAGCTGCCCGAGTCCACCAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021005.15 ENSMUST00000155263.2 |
||
| CDS-3UTR CAA 90 bp | ATGAACATGAACTTGTCTAGAAGGATCTGGAGTCTATGCCAGCGTCTCTCAGGACTGACAGGTTGGCAATaGTGCCCAGAATGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MNMNLSRRIWSLCQRLSGLTGWQ*CPECLL Trigger: CAGCAGACATTCTGGGCACAATTGCCAACCTGTCAG...TCCTGAGAGACGCTGGCATAGACTCCAGATCCTTCTAGACAAGTTCATGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | TGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATCTGGTGAGTCCAGTGTaGTCACAGATGACCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WTVTRELSVFERALLILNLVSPV*SQMTRG Trigger: ACCTCGGGTCATCTGTGACAACACTGGACTCACCAG...ATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGAACACAGTACCTATTGTaGCACGCCCCTGTGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HESRAHFAVTCGYEQVLRTQYLL*HAPVMG Trigger: GCCCATCACAGGGGCGTGCAACAATAGGTACTGTGT...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS-3UTR CAA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGACTGACAGGTTGGCAATaGTGCCCAGAATGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HESRAHFAVTCGYEQVLRLTGWQ*CPECLL Trigger: CAGCAGACATTCTGGGCACAATTGCCAACCTGTCAG...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS-3UTR CAA 90 bp | ACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAATTGGCTGCAGACAGGTaGCCAAAGAGAGCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVTRELSVFERALLILNELAADR*PKRAPW Trigger: CCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAA...TTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | CCAGACCAGCAAAATGCTATAGCATTTCTTCGCCTGTGCTTTGTGGTGACTGGAACAGGATTCAAAGTCTaGGGGGAACTTTCCAATACG | + |
|
Preference number: 5 (lower is better) Translates to: PDQQNAIAFLRLCFVVTGTGFKV*GELSNT Trigger: CGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTGT...TCCAGTCACCACAAAGCACAGGCGAAGAAATGCTATAGCATTTTGCTGGTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATTGGTCCCTGAGGAGTTaGAGGGAAGCTGTATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTRELSVFERALLILNEHWSLRS*REAVWG Trigger: TCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCA...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | ACACGTGTCATGTCTTTGCCCAGGCAGCTTGAGACTTGCCTTTGCCAATGTCTGTATAAGTCCATTATCTaGTTGACCATGCTTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRVMSLPRQLETCLCQCLYKSII*LTMLLL Trigger: CAACAGAAGCATGGTCAACAAGATAATGGACTTATA...CAGACATTGGCAAAGGCAAGTCTCAAGCTGCCTGGGCAAAGACATGACACGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GGTGACTGGACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTAGGACTTCCCTTTTCTaGAGGTTTCTTTTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GDWTVTRELSVFERALLIRTSLF*RFLFMV Trigger: CACCATGAAAAGAAACCTCAAGAAAAGGGAAGTCCT...AATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | ACCGTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAATCTGGGAAGACACACTaGTCATCTTGTGGGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVTRELSVFERALLILNESGKTH*SSCGKV Trigger: GACCTTCCCACAAGATGACAAGTGTGTCTTCCCAGA...TTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | GTAACGAGAGAACTGAGTGTATTTGAAAGAGCCTTGCTGATTCTGAATGAACATAAGCATCCTGACAGGTaGGCAATTGTGCCCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VTRELSVFERALLILNEHKHPDR*AIVPRM Trigger: CATTCTGGGCACAATTGCCAACCTGTCAGGATGCTT...ATGTTCATTCAGAATCAGCAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS-3UTR CAA 90 bp | CATGAATCTAGAGCCCACTTTGCAGTGACTTGTGGTTATGAACAAGTCTTGAGAAGGACTTCCCTTTTCTaGAGGTTTCTTTTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HESRAHFAVTCGYEQVLRRTSLF*RFLFMV Trigger: CACCATGAAAAGAAACCTCAAGAAAAGGGAAGTCCT...TCTCAAGACTTGTTCATAACCACAAGTCACTGCAAAGTGGGCTCTAGATTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS CCA 72 bp | CGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGCGGTTaGTGCGTGGGGTACCAGGCTCTGGAGCGCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RDRLQPGSRACG*CVGYQALERRR Trigger: CCGCCTGCGCTCCAGAGCCTGGTACCCCACGCACCAACCGCACGCCCTGCTTCCTGGCTGGAGACGGTCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | GTCTCCAGCCAGGAAGCAGGGCGTGCGGTTGGTGCGTaGGGTACCAGGCTCTGGAGCGCAGGCGGCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSSQEAGRAVGA*GTRLWSAGGCC Trigger: GCAACAGCCGCCTGCGCTCCAGAGCCTGGTACCCCACGCACCAACCGCACGCCCTGCTTCCTGGCTGGAGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | ACAAGGTGTGTACCGCTGCCAGGGCAGGGACCTCACTaGCGCGACCGTCTCCAGCCAGGAAGCAGGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRCVPLPGQGPH*RDRLQPGSRAC Trigger: GCACGCCCTGCTTCCTGGCTGGAGACGGTCGCGCCAGTGAGGTCCCTGCCCTGGCAGCGGTACACACCTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | CGCAGCAGTCCTGCCGAGCTGCTCCAGTTGCGCAGCTaGTTCTCAACGCCAGGGGAGCTGCCGTACACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSPAELLQLRS*FSTPGELPYTV Trigger: CACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGCTGCGCAACTGGAGCAGCTCGGCAGGACTGCTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | GCGCTCCAGTGCTTGTTAATGGCCTTGAAGGCCGAAGCCAGGCGGTaGTGCTCGCGCAGCCACAAGGTGTGTACCGCTGCCAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALQCLLMALKAEARR*CSRSHKVCTAARAG Trigger: CCCTGCCCTGGCAGCGGTACACACCTTGTGGCTGCGCGAGCACAACCGCCTGGCTTCGGCCTTCAAGGCCATTAACAAGCACTGGAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | CTGCTGCCTCGGATTGGCTGCAGACAGGTTGCCAAAGAGAGCACCTaGGTCCCCAGTGCCACAAGCGGCGGAGGAGCGGTAGAAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPRIGCRQVAKEST*VPSATSGGGAVERQ Trigger: CTGCCTTTCTACCGCTCCTCCGCCGCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | AGGTGGAGAGTGTTGACACGCAGCAGTCCTGCCGAGCTGCTCCAGTaGCGCAGCTGCTTCTCAACGCCAGGGGAGCTGCCGTACACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWRVLTRSSPAELLQ*RSCFSTPGELPYTV Trigger: CACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGCTGCGCAACTGGAGCAGCTCGGCAGGACTGCTGCGTGTCAACACTCTCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 72 bp | CGGATTGGCTGCAGACAGGTTGCCAAAGAGAGCACCTaGGTCCCCAGTGCCACAAGCGGCGGAGGAGCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RIGCRQVAKEST*VPSATSGGGAV Trigger: TACCGCTCCTCCGCCGCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 72 bp | GAGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTaGGACTTGCAGCTTGGCTGCTCTCGCCAGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPLGQLLIHQLP*DLQLGCSRQEA Trigger: GGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | TTGTTAATGGCCTTGAAGGCCGAAGCCAGGCGGTTGTaGTCGCGCAGCCACAAGGTGTGTACCGCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLMALKAEARRL*SRSHKVCTAAR Trigger: CCTGGCAGCGGTACACACCTTGTGGCTGCGCGAGCACAACCGCCTGGCTTCGGCCTTCAAGGCCATTAACAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | AGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTaGACTTGCAGCTTGGCTGCTCTCGCCAGGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSVSSSFISCP*TCSLAALARRP Trigger: AGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 72 bp | TGCTTGTTAATGGCCTTGAAGGCCGAAGCCAGGCGGTaGTGCTCGCGCAGCCACAAGGTGTGTACCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLLMALKAEARR*CSRSHKVCTAA Trigger: GGCAGCGGTACACACCTTGTGGCTGCGCGAGCACAACCGCCTGGCTTCGGCCTTCAAGGCCATTAACAAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 72 bp | CTCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTaGCAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGQLLIHQLPLD*QLGCSRQEASH Trigger: GTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | GAGGTCAAGCCATTCATCTGCTGCCTCGGATTGGCTGCAGACAGGTaGCCAAAGAGAGCACCTTGGTCCCCAGTGCCACAAGCGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVKPFICCLGLAADR*PKRAPWSPVPQAAE Trigger: CTCCGCCGCTTGTGGCACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | TCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTTaGAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSSFISCPWT*SLAALARRPLT Trigger: AGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | ACGAAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTaGCCTTGGACTTGCAGCTTGGCTGCTCTCGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TKSLSVSSSFIS*PWTCSLAALAR Trigger: CCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTCGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | AAGCGGCGGAGGAGCGGTAGAAAGGCAGGCATGCAGTaGTCCCTGAGGAGTTTGAGGGAAGCTGTATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRRRSGRKAGMQ*SLRSLREAVWG Trigger: TCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCACTGCATGCCTGCCTTTCTACCGCTCCTCCGCCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | GAAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTaGCAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: EEPLGQLLIHQLPLD*QLGCSRQEASHYRI Trigger: GATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | CAGCACGAAGAGCCTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTaGGACTTGCAGCTTGGCTGCTCTCGCCAGGAGGCCTCTCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: QHEEPLGQLLIHQLP*DLQLGCSRQEASHY Trigger: ATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTCGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | CTCTCGGTCAGCTCCTCATTCATCAGCTGCCCTTGGACTTGCAGCTaGGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGATCCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LSVSSSFISCPWTCS*AALARRPLTIGSKP Trigger: TGGTTTGGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 72 bp | CAGGAGGTTCGGAGTCCCATCCCTTCTGGGTACATGTaGCCTGCTCCTGGCCCTGCAGCTTGTATCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QEVRSPIPSGYM*PAPGPAACIHG Trigger: TCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | GGAGGTCAAGCCATTCATCTGCTGCCTCGGATTGGCTaGAGACAGGTTGCCAAAGAGAGCACCTTGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGQAIHLLPRIG*RQVAKESTLVP Trigger: GGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | TCACGCAGCTGCAACCTGGGGAGCTCTGTGTGCTCCTaGAAGTCAGTGTTTAGCCGTCTCACCAGTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSCNLGSSVCS*KSVFSRLTSGW Trigger: CCATCCACTGGTGAGACGGCTAAACACTGACTTCCAGGAGCACACAGAGCTCCCCAGGTTGCAGCTGCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | GCTCCTCATTCATCAGCTGCCCTTGGACTTGCAGCTTaGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: APHSSAALGLAA*LLSPGGLSLSD Trigger: ATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 72 bp | AGCTCCTCATTCATCAGCTGCCCTTGGACTTGCAGCTaGGCTGCTCTCGCCAGGAGGCCTCTCACTATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSFISCPWTCS*AALARRPLTIG Trigger: TCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | CTCATTCATCAGCTGCCCTTGGACTTGCAGCTTGGCTaGTCTCGCCAGGAGGCCTCTCACTATCGGATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LIHQLPLDLQLG*SRQEASHYRIQ Trigger: TTGGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | GGTTCGGAGTCCCATCCCTTCTGGGTACATGTGACCTaGTCCTGGCCCTGCAGCTTGTATCCATGGAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: GSESHPFWVHVT*SWPCSLYPWKQ Trigger: CTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | CACACACTGGAAGCTTCCCTTGGTGTTCTTGCACTGTaGAGAGGGGTGGCAAGGTGGGTGTGTCAGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HTLEASLGVLAL*RGVARWVCQIC Trigger: GCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAACACCAAGGGAAGCTTCCAGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | TCTTTACAGACAGGAGGTTCGGAGTCCCATCCCTTCTaGGTACATGTGACCTGCTCCTGGCCCTGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQTGGSESHPF*VHVTCSWPCSL Trigger: CAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTGTCTGTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | CGGAGGAGCGGTAGAAAGGCAGGCATGCAGTGGTCCCTGAGGAGTTaGAGGGAAGCTGTATGGGGAAGCAAGGATTTTGGTTCTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSGRKAGMQWSLRS*REAVWGSKDFGSHR Trigger: CCTGTGAGAACCAAAATCCTTGCTTCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCACTGCATGCCTGCCTTTCTACCGCTCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CAA 90 bp | GAAGCATCAAGGAAGGAGGTCAAGCCATTCATCTGCTGCCTCGGATaGGCTGCAGACAGGTTGCCAAAGAGAGCACCTTGGTCCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EASRKEVKPFICCLG*AADRLPKRAPWSPV Trigger: CACTGGGGACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 72 bp | GGTCATCTTCGGTCACAGCCTCATTGGAAACTTGAATaGGGTGCCTTGTCACTTCCCGTACCGGGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GHLRSQPHWKLE*GALSLPVPGAV Trigger: CACTGCCCCCGGTACGGGAAGTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCTGTGACCGAAGATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS TCA 72 bp | GGGTCTTCACACAGTACCTATTGTTGCACGCCCCTGTaGTGGGCCGGTACTTATTTGCCAGGCAGGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSHSTYCCTPL*WAGTYLPGRCQ Trigger: CTGACACCTGCCTGGCAAATAAGTACCGGCCCATCACAGGGGCGTGCAACAATAGGTACTGTGTGAAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155263.2 |
||
| CDS GCA 72 bp | ATTGTTGCACGCCCCTGTGATGGGCCGGTACTTATTTaGCAGGCAGGTGTCAGGACATCTTGGTGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: IVARPCDGPVLI*QAGVRTSWWQH Trigger: ATGCTGCCACCAAGATGTCCTGACACCTGCCTGGCAAATAAGTACCGGCCCATCACAGGGGCGTGCAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021005.15 ENSMUST00000155263.2 |
||
| CDS GCA 72 bp | ATAAGCCTCCAGGGTCTGAAGAAGACATCACGCAGCTaGAACCTGGGGAGCTCTGTGTGCTCCTGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISLQGLKKTSRS*NLGSSVCSWKS Trigger: TGACTTCCAGGAGCACACAGAGCTCCCCAGGTTGCAGCTGCGTGATGTCTTCTTCAGACCCTGGAGGCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS GCA 72 bp | AGACCCAGGATGCCCGAGGTAGCCTGCCAGAATCTATaGAGGTCTTCTCATCCTCACCTAGCACATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPRMPEVACQNL*RSSHPHLAHRG Trigger: ACCCCTATGTGCTAGGTGAGGATGAGAAGACCTGCATAGATTCTGGCAGGCTACCTCGGGCATCCTGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
||
| CDS CCA 72 bp | GGAAGGAGGTCAAGCCATTCATCTGCTGCCTCGGATTaGCTGCAGACAGGTTGCCAAAGAGAGCACCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRSSHSSAASD*LQTGCQREHLG Trigger: ACCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | GCTGCTTCTCAACGCCAGGGGAGCTGCCGTACACAGTaGAAGCATCAAGGAAGGAGGTCAAGCCATTCATCT | + |
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Preference number: 6 (lower is better) Translates to: AASQRQGSCRTQ*KHQGRRSSHSS Trigger: AGATGAATGGCTTGACCTCCTTCCTTGATGCTTCCACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 72 bp | AGGAAGGAGGTCAAGCCATTCATCTGCTGCCTCGGATaGGCTGCAGACAGGTTGCCAAAGAGAGCACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RKEVKPFICCLG*AADRLPKRAPW Trigger: CCAAGGTGCTCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | TCCCATCCCTTCTGGGTACATGTGACCTGCTCCTGGCCCTGCAGCTaGTATCCATGGAAACAGGAGTATACAAGCACCAGCTTCCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SHPFWVHVTCSWPCS*YPWKQEYTSTSFPD Trigger: GTCTGGGAAGCTGGTGCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS TCA 72 bp | TTGCCAGGCAGGTGTCAGGACATCTTGGTGGCAGCATaGAAGGCAAGCATCCTGACAGGTTGGCAATTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LPGRCQDILVAA*KASILTGWQLC Trigger: GCACAATTGCCAACCTGTCAGGATGCTTGCCTTTCATGCTGCCACCAAGATGTCCTGACACCTGCCTGGCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021005.15 ENSMUST00000155263.2 |
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| CDS GCA 72 bp | GTGGAAGCATCAAGGAAGGAGGTCAAGCCATTCATCTaGTGCCTCGGATTGGCTGCAGACAGGTTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VEASRKEVKPFI*CLGLAADRLPK Trigger: CTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | GACACCTCCCCAGAAGGCTGCTGTGCTAGTGCTCTGTaGTGTGAGAGCAATGTCATGATCGATGTACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DTSPEGCCASAL*CESNVMIDVLS Trigger: GGACAGTACATCGATCATGACATTGCTCTCACACCACAGAGCACTAGCACAGCAGCCTTCTGGGGAGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | GAGTTTGAGGGAAGCTGTATGGGGAAGCAAGGATTTTaGTTCTCACAGGTCAGCTGGCAGTCGACACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: EFEGSCMGKQGF*FSQVSWQSTPP Trigger: GGGAGGTGTCGACTGCCAGCTGACCTGTGAGAACCAAAATCCTTGCTTCCCCATACAGCTTCCCTCAAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | GTGTTTAGCCGTCTCACCAGTGGATGGACTGTGGCATaGCCAAAGCGAAAGGCAGCAGTGGAGAAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: VFSRLTSGWTVA*PKRKAAVEKML Trigger: CAACATCTTCTCCACTGCTGCCTTTCGCTTTGGCCATGCCACAGTCCATCCACTGGTGAGACGGCTAAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | AGTCAGTGTTTAGCCGTCTCACCAGTGGATGGACTGTaGCATGGCCAAAGCGAAAGGCAGCAGTGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SQCLAVSPVDGL*HGQSERQQWRR Trigger: TCTTCTCCACTGCTGCCTTTCGCTTTGGCCATGCCACAGTCCATCCACTGGTGAGACGGCTAAACACTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | AGGAGGCCTCTCACTATCGGATCCAAACCACCTTCCTaGATAAGCCTCCAGGGTCTGAAGAAGACATCACGC | + |
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Preference number: 6 (lower is better) Translates to: RRPLTIGSKPPS*ISLQGLKKTSR Trigger: GCGTGATGTCTTCTTCAGACCCTGGAGGCTTATCCAGGAAGGTGGTTTGGATCCGATAGTGAGAGGCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | GAGTCCCATCCCTTCTGGGTACATGTGACCTGCTCCTaGCCCTGCAGCTTGTATCCATGGAAACAGGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: ESHPFWVHVTCS*PCSLYPWKQEY Trigger: ATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 72 bp | GTACTGGTCATCTTCGGTCACAGCCTCATTGGAAACTaGAATGAGGTGCCTTGTCACTTCCCGTACCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLVIFGHSLIGN*NEVPCHFPYRG Trigger: CCCCCGGTACGGGAAGTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCTGTGACCGAAGATGACCAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | GAAGCATCAAGGAAGGAGGTCAAGCCATTCATCTGCTaGCTCGGATTGGCTGCAGACAGGTTGCCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: EASRKEVKPFIC*LGLAADRLPKR Trigger: TCTCTTTGGCAACCTGTCTGCAGCCAATCCGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | CTTGTGGGAAGGTCTCCCTCCATAGTTCAAGGTCCATaGTCGGGATGTCCTCACAGGATTCAAAGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LVGRSPSIVQGP*SGCPHRIQSLG Trigger: CCCAAGACTTTGAATCCTGTGAGGACATCCCGAGCATGGACCTTGAACTATGGAGGGAGACCTTCCCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | CATCCCTTCTGGGTACATGTGACCTGCTCCTGGCCCTaGAGCTTGTATCCATGGAAACAGGAGTATACAAGC | + |
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Preference number: 6 (lower is better) Translates to: HPFWVHVTCSWP*SLYPWKQEYTS Trigger: GCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | AAGCTTCCCTTGGTGTTCTTGCACTGTGCAGAGGGGTaGCAAGGTGGGTGTGTCAGATCTGCACACTCATTA | + |
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Preference number: 6 (lower is better) Translates to: KLPLVFLHCAEG*QGGCVRSAHSL Trigger: TAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAACACCAAGGGAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 72 bp | GTCCATGCTCGGGATGTCCTCACAGGATTCAAAGTCTaGGGGGAACTTTCCAATACGGAAGGCATCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: VHARDVLTGFKV*GELSNTEGIHR Trigger: CCTGTGGATGCCTTCCGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTGTGAGGACATCCCGAGCATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | AAAATCAGAGTACTGGTCATCTTCGGTCACAGCCTCATTGGAAACTaGAATGAGGTGCCTTGTCACTTCCCGTACCGGGGGCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: KIRVLVIFGHSLIGN*NEVPCHFPYRGQWE Trigger: TTCCCACTGCCCCCGGTACGGGAAGTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCTGTGACCGAAGATGACCAGTACTCTGATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | CAGTGCACAAAGTTCCCATTGTCCACCTCCTCTGGGAAGACACACTaGTCATCTTGTGGGAAGGTCTCCCTCCATAGTTCAAGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: QCTKFPLSTSSGKTH*SSCGKVSLHSSRSM Trigger: CATGGACCTTGAACTATGGAGGGAGACCTTCCCACAAGATGACAAGTGTGTCTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS TCA 72 bp | GCTGTGCTAGTGCTCTGTGGTGTGAGAGCAATGTCATaGTCGATGTACTGTCCCCACACCGGCAGAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: AVLVLCGVRAMS*SMYCPHTGRKS Trigger: TGATTTTCTGCCGGTGTGGGGACAGTACATCGATCATGACATTGCTCTCACACCACAGAGCACTAGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS TCA 72 bp | AATGGCCTTGTTCAGCTCAGCTGGTGTCTCCAGGCGTaGCAAGCCACAGAACTCTCTCCATTCATTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: NGLVQLSWCLQA*QATELSPFIVV Trigger: GACTACAATGAATGGAGAGAGTTCTGTGGCTTGTCACGCCTGGAGACACCAGCTGAGCTGAACAAGGCCATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | GAGTATACAAGCACCAGCTTCCCAGACTCTTCACAGTaGACAAAGTTCCCATTGTCCACCTCCTCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EYTSTSFPDSSQ*TKFPLSTSSGK Trigger: CTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCACTGTGAAGAGTCTGGGAAGCTGGTGCTTGTATACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | CTGTGCAGAGGGGTGGCAAGGTGGGTGTGTCAGATCTaGACACTCATTAACATCTTTACAGACAGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCRGVARWVCQI*TLINIFTDRRF Trigger: GAACCTCCTGTCTGTAAAGATGTTAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | ATGCAGTGGTCCCTGAGGAGTTTGAGGGAAGCTGTATaGGGAAGCAAGGATTTTGGTTCTCACAGGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: MQWSLRSLREAV*GSKDFGSHRSA Trigger: AGCTGACCTGTGAGAACCAAAATCCTTGCTTCCCCATACAGCTTCCCTCAAACTCCTCAGGGACCACTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | TCCATGCTCGGGATGTCCTCACAGGATTCAAAGTCTTaGGGGAACTTTCCAATACGGAAGGCATCCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: SMLGMSSQDSKS*GNFPIRKASTG Trigger: ACCTGTGGATGCCTTCCGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTGTGAGGACATCCCGAGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 72 bp | CTTGGTGGCAGCATGAAAGGCAAGCATCCTGACAGGTaGGCAATTGTGCCCAGAATGTCTGCTGATAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGGSMKGKHPDR*AIVPRMSADKA Trigger: TGCCTTATCAGCAGACATTCTGGGCACAATTGCCAACCTGTCAGGATGCTTGCCTTTCATGCTGCCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021005.15 ENSMUST00000155263.2 |
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| CDS CAA 72 bp | CGGAAGGCATCCACAGGTACTCTGGTGAGTCCAGTGTaGTCACAGATGACCCGAGGTAGTGAATGCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RKASTGTLVSPV*SQMTRGSECFS Trigger: AGAAAAGCATTCACTACCTCGGGTCATCTGTGACAACACTGGACTCACCAGAGTACCTGTGGATGCCTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS TCA 72 bp | TCTTTCTGCATCCTGACTGGGTGGTCACTCTCTCTGTaGTCGGCAATGTGGCTTTCTTATCAGCATGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFCILTGWSLSL*SAMWLSYQHVS Trigger: GGACACATGCTGATAAGAAAGCCACATTGCCGATCACAGAGAGAGTGACCACCCAGTCAGGATGCAGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | TTCACAGTGCACAAAGTTCCCATTGTCCACCTCCTCTaGGAAGACACACTTGTCATCTTGTGGGAAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FTVHKVPIVHLL*EDTLVILWEGL Trigger: GAGACCTTCCCACAAGATGACAAGTGTGTCTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCACTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CCA 72 bp | CTTGGTGTTCTTGCACTGTGCAGAGGGGTGGCAAGGTaGGTGTGTCAGATCTGCACACTCATTAACATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGVLALCRGVAR*VCQICTLINIF Trigger: AAAGATGTTAATGAGTGTGCAGATCTGACACACCCACCTTGCCACCCCTCTGCACAGTGCAAGAACACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 72 bp | ATTATCTTGTTGACCATGCTTCTGTTGGCAATGGCCTaGTTCAGCTCAGCTGGTGTCTCCAGGCGTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: IILLTMLLLAMA*FSSAGVSRRDK Trigger: CTTGTCACGCCTGGAGACACCAGCTGAGCTGAACAAGGCCATTGCCAACAGAAGCATGGTCAACAAGATAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | TATAAGTCCATTATCTTGTTGACCATGCTTCTGTTGGCAATGGCCTaGTTCAGCTCAGCTGGTGTCTCCAGGCGTGACAAGCCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: YKSIILLTMLLLAMA*FSSAGVSRRDKPQN Trigger: GTTCTGTGGCTTGTCACGCCTGGAGACACCAGCTGAGCTGAACAAGGCCATTGCCAACAGAAGCATGGTCAACAAGATAATGGACTTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | TCAGCATGCTTGTATAAGTCCATTATCTTGTTGACCATGCTTCTGTaGGCAATGGCCTTGTTCAGCTCAGCTGGTGTCTCCAGGCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SACLYKSIILLTMLL*AMALFSSAGVSRRD Trigger: GTCACGCCTGGAGACACCAGCTGAGCTGAACAAGGCCATTGCCAACAGAAGCATGGTCAACAAGATAATGGACTTATACAAGCATGCTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS CAA 90 bp | TTTCCAATACGGAAGGCATCCACAGGTACTCTGGTGAGTCCAGTGTaGTCACAGATGACCCGAGGTAGTGAATGCTTTTCTAGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: FPIRKASTGTLVSPV*SQMTRGSECFSSSC Trigger: GCAGGAACTAGAAAAGCATTCACTACCTCGGGTCATCTGTGACAACACTGGACTCACCAGAGTACCTGTGGATGCCTTCCGTATTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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| CDS GCA 72 bp | CCTTTTCTTGAGGTTTCTTTTCATGGTGTTGTAGACTaGATGGTCCACCATGAGCTGGCTCGTTTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PFLEVSFHGVVD*MVHHELARFHS Trigger: GCTGTGGAAACGAGCCAGCTCATGGTGGACCATGCAGTCTACAACACCATGAAAAGAAACCTCAAGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021005.15 ENSMUST00000155263.2 |
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| CDS TCA 72 bp | TGTTGTCAGCATGCTTGTATAAGTCCATTATCTTGTTaGCCATGCTTCTGTTGGCAATGGCCTTGTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CCQHACISPLSC*PCFCWQWPCSA Trigger: AGCTGAACAAGGCCATTGCCAACAGAAGCATGGTCAACAAGATAATGGACTTATACAAGCATGCTGACAACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021005.15 |
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