Pregenerated sensors for TPMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021376Ensembl transcript IDs: ENSMUST00000021806.11, ENSMUST00000110118.8, ENSMUST00000124948.2, ENSMUST00000136864.8, ENSMUST00000151509.9, ENSMUST00000154802.2, ENSMUST00000224970.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGAGGGGATGGGATGGGATGTCACCAAACAGGAGTCGGAGCTGCATaGCAAGGACATGGAGAAGCAGCCGGCGAGTGTATGGCTCAGACA | + |
Preference number: 1 (lower is better) Translates to: RGDGMGCHQTGVGAA*QGHGEAAGECMAQT Trigger: TGTCTGAGCCATACACTCGCCGGCTGCTTCTCCATGTCCTTGTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCCATCCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR GCA 90 bp | GCAACTGGGGACTGGAGAGATGGCTCAGCAAGTAAGAGCACTCACTaGTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT | + |
Preference number: 1 (lower is better) Translates to: ATGDWRDGSASKSTH*SSEGPEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTGAGTGCTCTTACTTGCTGAGCCATCTCTCCAGTCCCCAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR GCA 90 bp | GAAGGCCTGGCGTTTCAGAGCAAATTCTCCCACATCTTCTACTTCTaGTCTCAAGATGTGAAGCAACTGAAGACAGCAAGCCTAGCTGGG | + |
Preference number: 1 (lower is better) Translates to: EGLAFQSKFSHIFYF*SQDVKQLKTASLAG Trigger: CCCAGCTAGGCTTGCTGTCTTCAGTTGCTTCACATCTTGAGAGCAGAAGTAGAAGATGTGGGAGAATTTGCTCTGAAACGCCAGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 90 bp | CAACCTGCAAAACTATTTAGCACTGACAGCTTAGAGGGGATGGGATaGGATGTCACCAAACAGGAGTCGGAGCTGCATGACAAGGACATG | + |
Preference number: 1 (lower is better) Translates to: QPAKLFSTDSLEGMG*DVTKQESELHDKDM Trigger: CATGTCCTTGTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCCATCCCCTCTAAGCTGTCAGTGCTAAATAGTTTTGCAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 90 bp | AACCTTCTTGTACCAAAGGGAACTGAAAAGAAGCCACACGTGGGCTaGAATCGGCAAGACTATTATGTTGAAAAATTGAACGCCTGTCTG | + |
Preference number: 1 (lower is better) Translates to: NLLVPKGTEKKPHVG*NRQDYYVEKLNACL Trigger: CAGACAGGCGTTCAATTTTTCAACATAATAGTCTTGCCGATTCCAGCCCACGTGTGGCTTCTTTTCAGTTCCCTTTGGTACAAGAAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 90 bp | CATGGTGGCTCACAACCACCTGTAACGAGATCTGATGCCCTCTTCTaGTGCTGTCTGAAGACAGATTATAGAGTACTTATTTATAATAAT | + |
Preference number: 1 (lower is better) Translates to: HGGSQPPVTRSDALF*CCLKTDYRVLIYNN Trigger: ATTATTATAAATAAGTACTCTATAATCTGTCTTCAGACAGCACCAGAAGAGGGCATCAGATCTCGTTACAGGTGGTTGTGAGCCACCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR GCA 90 bp | GGTGGCTCACAACCACCTGTAACGAGATCTGATGCCCTCTTCTGGTaGTGTCTGAAGACAGATTATAGAGTACTTATTTATAATAATAAA | + |
Preference number: 1 (lower is better) Translates to: GGSQPPVTRSDALFW*CLKTDYRVLIYNNK Trigger: TTTATTATTATAAATAAGTACTCTATAATCTGTCTTCAGACAGCACCAGAAGAGGGCATCAGATCTCGTTACAGGTGGTTGTGAGCCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR TCA 90 bp | AGACAGATTATAGAGTACTTATTTATAATAATAAATCTTTGGGCCTaGGCAAGGAGGCTGACTGGAGTGAGCAGAGGTCCTAAAGTCAAT | + |
Preference number: 1 (lower is better) Translates to: RQIIEYLFIIINLWA*ARRLTGVSRGPKVN Trigger: ATTGACTTTAGGACCTCTGCTCACTCCAGTCAGCCTCCTTGCTCAGGCCCAAAGATTTATTATTATAAATAAGTACTCTATAATCTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR-3UTR CCA 90 bp | TCCAGAGAGCAGCCCAGTCCCTCAGCTCCCACAGAGGAGATCCCATCCCAACCTAGCCTGTCTCATCACTaGAGGCTGCTAGGACCTGGC | + |
Preference number: 2 (lower is better) Translates to: SREQPSPSAPTEEIPSQPSLSHH*RLLGPG Trigger: GCCAGGTCCTAGCAGCCTCCAGTGATGAGACAGGCT...AGGTTGGGATGGGATCTCCTCTGTGGGAGCTGAGGGACTGGGCTGCTCTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR-3UTR TCA 90 bp | CCATCCCAACCTGCAAAACTATTTAGCACTGACAGCTTAGAGGGGATGGGATGGGGAGTCGGAGCTGCATaGCAAGGACATGGAGAAGCA | + |
Preference number: 2 (lower is better) Translates to: PSQPAKLFSTDSLEGMGWGVGAA*QGHGEA Trigger: TGCTTCTCCATGTCCTTGTCATGCAGCTCCGACTCC...CCATCCCATCCCCTCTAAGCTGTCAGTGCTAAATAGTTTTGCAGGTTGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR-3UTR GCA 90 bp | GAGAGGGCAACTGGGGACTGGAGAGATGGCTCAGCAAGTAAGAGCACTCACTGCCACATCTTCTACTTCTaGTCTCAAGATGTGAAGCAA | + |
Preference number: 2 (lower is better) Translates to: ERATGDWRDGSASKSTHCHIFYF*SQDVKQ Trigger: TTGCTTCACATCTTGAGAGCAGAAGTAGAAGATGTG...GCAGTGAGTGCTCTTACTTGCTGAGCCATCTCTCCAGTCCCCAGTTGCCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR TCA 72 bp | GGGATGGGATGTCACCAAACAGGAGTCGGAGCTGCATaGCAAGGACATGGAGAAGCAGCCGGCGAGTGTATG | + |
Preference number: 3 (lower is better) Translates to: GMGCHQTGVGAA*QGHGEAAGECM Trigger: CATACACTCGCCGGCTGCTTCTCCATGTCCTTGTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR-3UTR CAA 90 bp | GAGAGGGCAACTGGGGACTGGAGAGATGGCTCAGCAAGTAAGAGCACTCACTGCGTCTCTCTGGCTGTCTaGGAACTCACTGGTAGACCA | + |
Preference number: 3 (lower is better) Translates to: ERATGDWRDGSASKSTHCVSLAV*ELTGRP Trigger: TGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGAC...GCAGTGAGTGCTCTTACTTGCTGAGCCATCTCTCCAGTCCCCAGTTGCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR TCA 72 bp | CCTCATCCTTCAGAAGACCAATGGGAAGGATCTTACTaGGAGGGCAACTGGGGACTGGAGAGATGGCTCAGC | + |
Preference number: 3 (lower is better) Translates to: PHPSEDQWEGSY*EGNWGLERWLS Trigger: GCTGAGCCATCTCTCCAGTCCCCAGTTGCCCTCTCAGTAAGATCCTTCCCATTGGTCTTCTGAAGGATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | CATGACAAGGACATGGAGAAGCAGCCGGCGAGTGTATaGCTCAGACAGTGCACTTGTGTCACTAAGGGTGAG | + |
Preference number: 3 (lower is better) Translates to: HDKDMEKQPASV*LRQCTCVTKGE Trigger: CTCACCCTTAGTGACACAAGTGCACTGTCTGAGCCATACACTCGCCGGCTGCTTCTCCATGTCCTTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | AATGGGAAGGATCTTACTGAGAGGGCAACTGGGGACTaGAGAGATGGCTCAGCAAGTAAGAGCACTCACTGC | + |
Preference number: 3 (lower is better) Translates to: NGKDLTERATGD*RDGSASKSTHC Trigger: GCAGTGAGTGCTCTTACTTGCTGAGCCATCTCTCCAGTCCCCAGTTGCCCTCTCAGTAAGATCCTTCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | TGTGGCCTTGTCGGAGTAGGTGTGTCACTGTGGGTGTaGGTTATAAGACCCTCATCCTTCAGAAGACCAATG | + |
Preference number: 3 (lower is better) Translates to: CGLVGVGVSLWV*VIRPSSFRRPM Trigger: CATTGGTCTTCTGAAGGATGAGGGTCTTATAACCCACACCCACAGTGACACACCTACTCCGACAAGGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | AAACTATTTAGCACTGACAGCTTAGAGGGGATGGGATaGGATGTCACCAAACAGGAGTCGGAGCTGCATGAC | + |
Preference number: 3 (lower is better) Translates to: KLFSTDSLEGMG*DVTKQESELHD Trigger: GTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCCATCCCCTCTAAGCTGTCAGTGCTAAATAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | TGGTTTTCTATTTGGTTTTTCCAGATAGGGTCTCTCTaGCTGTCTTGGAACTCACTGGTAGACCAGGCTAGC | + |
Preference number: 3 (lower is better) Translates to: WFSIWFFQIGSL*LSWNSLVDQAS Trigger: GCTAGCCTGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAAAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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3UTR GCA 72 bp | GCGTTTCAGAGCAAATTCTCCCACATCTTCTACTTCTaGTCTCAAGATGTGAAGCAACTGAAGACAGCAAGC | + |
Preference number: 3 (lower is better) Translates to: AFQSKFSHIFYF*SQDVKQLKTAS Trigger: GCTTGCTGTCTTCAGTTGCTTCACATCTTGAGAGCAGAAGTAGAAGATGTGGGAGAATTTGCTCTGAAACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR GCA 72 bp | CTGGCTGACATCCTCAGGAACAATCAGAACCTGAGTTaGCTAAACGTTTCAGAGAACATTCTAGAAGACTCT | + |
Preference number: 3 (lower is better) Translates to: LADILRNNQNLS*LNVSENILEDS Trigger: AGAGTCTTCTAGAATGTTCTCTGAAACGTTTAGGCAACTCAGGTTCTGATTGTTCCTGAGGATGTCAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | TCACAACCACCTGTAACGAGATCTGATGCCCTCTTCTaGTGCTGTCTGAAGACAGATTATAGAGTACTTATT | + |
Preference number: 3 (lower is better) Translates to: SQPPVTRSDALF*CCLKTDYRVLI Trigger: AATAAGTACTCTATAATCTGTCTTCAGACAGCACCAGAAGAGGGCATCAGATCTCGTTACAGGTGGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR TCA 72 bp | ATAGAGTACTTATTTATAATAATAAATCTTTGGGCCTaGGCAAGGAGGCTGACTGGAGTGAGCAGAGGTCCT | + |
Preference number: 3 (lower is better) Translates to: IEYLFIIINLWA*ARRLTGVSRGP Trigger: AGGACCTCTGCTCACTCCAGTCAGCCTCCTTGCTCAGGCCCAAAGATTTATTATTATAAATAAGTACTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CCA 72 bp | TTCTTGTACCAAAGGGAACTGAAAAGAAGCCACACGTaGGCTGGAATCGGCAAGACTATTATGTTGAAAAAT | + |
Preference number: 3 (lower is better) Translates to: FLYQRELKRSHT*AGIGKTIMLKN Trigger: ATTTTTCAACATAATAGTCTTGCCGATTCCAGCCCACGTGTGGCTTCTTTTCAGTTCCCTTTGGTACAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS-3UTR TCA 90 bp | TGGACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCCCGGGTCCCTCCTGCTaGCTCTTGCAGAGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: WTVRGGELVLLIELAVQCPGPSC*LLQRLR Trigger: CCTCAGCCTCTGCAAGAGTCAGCAGGAGGGACCCGG...GCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR TCA 90 bp | TGGACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCGACTCTTGCAGAGGCTaGGGTCTGGCTGTCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: WTVRGGELVLLIELAVQCDSCRG*GLAVSA Trigger: AGCAGAGACAGCCAGACCTCAGCCTCTGCAAGAGTC...GCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR CCA 90 bp | TGGACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCGCAGAGGCTGAGGTCTaGCTGTCTCTGCTAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: WTVRGGELVLLIELAVQCAEAEV*LSLLGS Trigger: ACTACCTAGCAGAGACAGCCAGACCTCAGCCTCTGC...GCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGCAACTGGGGACTGGAGAGATGGCTCAGCAAGTAAGAGCACTCACTGCTCCAGGGTTAGTACTTaGTTCTTTTGTACCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: ERATGDWRDGSASKSTHCSRVST*FFCTSA Trigger: TGCTGAGGTACAAAAGAACCAAGTACTAACCCTGGA...GCAGTGAGTGCTCTTACTTGCTGAGCCATCTCTCCAGTCCCCAGTTGCCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS-3UTR CCA 90 bp | ACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCTGTGCTGAGAACTTTTCCTaGTGTCTCTCCGGGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: TVRGGELVLLIELAVQCCAENFS*CLSGSL Trigger: GAGGGACCCGGAGAGACACCAGGAAAAGTTCTCAGC...ACAGCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR TCA 90 bp | ACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCTGTGATTCCACCTCCATATaGATGCTGGGACCCAAACCT | + |
Preference number: 4 (lower is better) Translates to: TVRGGELVLLIELAVQCCDSTSI*MLGPKP Trigger: AGGTTTGGGTCCCAGCATTCATATGGAGGTGGAATC...ACAGCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR GCA 90 bp | CCATCCCAACCTGCAAAACTATTTAGCACTGACAGCTTAGAGGGGATGGGATGGACCTCAGCATCAGGGTaGTCTTTCATATCAAGGGAC | + |
Preference number: 4 (lower is better) Translates to: PSQPAKLFSTDSLEGMGWTSASG*SFISRD Trigger: GTCCCTTGATATGAAAGAGCACCCTGATGCTGAGGT...CCATCCCATCCCCTCTAAGCTGTCAGTGCTAAATAGTTTTGCAGGTTGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS-3UTR GCA 90 bp | TGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTAGACCAGACCTCAGCATCAGGGTaGTCTTTCATATCAAGGGAC | + |
Preference number: 4 (lower is better) Translates to: WFFQIGSLWLSWNSLVDQTSASG*SFISRD Trigger: GTCCCTTGATATGAAAGAGCACCCTGATGCTGAGGT...CTGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR GCA 90 bp | ACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCTGTCCACCTCCATATGAATaGTGGGACCCAAACCTGTGT | + |
Preference number: 4 (lower is better) Translates to: TVRGGELVLLIELAVQCCPPPYE*WDPNLC Trigger: ACACAGGTTTGGGTCCCAGCATTCATATGGAGGTGG...ACAGCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR TCA 90 bp | CCATCCCAACCTGCAAAACTATTTAGCACTGACAGCTTAGAGGGGATGGGATGGACAGCCACAAGGTACTaGAACTCTTTTCTCAGTAGG | + |
Preference number: 4 (lower is better) Translates to: PSQPAKLFSTDSLEGMGWTATRY*NSFLSR Trigger: CCTACTGAGAAAAGAGTTTCAGTACCTTGTGGCTGT...CCATCCCATCCCCTCTAAGCTGTCAGTGCTAAATAGTTTTGCAGGTTGGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS-3UTR CCA 90 bp | TTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTAGACCAGGCTTGGAACATAAAATGGTaGGCCTGCGTGTTTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: FFQIGSLWLSWNSLVDQAWNIKW*ACVFCW Trigger: CCAACAAAACACGCAGGCCCACCATTTTATGTTCCA...AGCCTGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR TCA 90 bp | TTGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTAGACCAACAGCCACAAGGTACTaGAACTCTTTTCTCAGTAGG | + |
Preference number: 4 (lower is better) Translates to: LVFPDRVSLAVLELTGRPTATRY*NSFLSR Trigger: CCTACTGAGAAAAGAGTTTCAGTACCTTGTGGCTGT...TGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR CCA 90 bp | ACAGTGAGGGGAGGTGAACTAGTCTTGCTTATAGAGCTAGCTGTGCAATGCTGTTGGAACATAAAATGGTaGGCCTGCGTGTTTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: TVRGGELVLLIELAVQCCWNIKW*ACVFCW Trigger: CCAACAAAACACGCAGGCCCACCATTTTATGTTCCA...ACAGCATTGCACAGCTAGCTCTATAAGCAAGACTAGTTCACCTCCCCTCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR CCA 90 bp | ATTTGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTAGACTGGAACATAAAATGGTaGGCCTGCGTGTTTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: IWFFQIGSLWLSWNSLVDWNIKW*ACVFCW Trigger: CCAACAAAACACGCAGGCCCACCATTTTATGTTCCA...GTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR GCA 90 bp | TTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTAGACCAGGCTGAAGATCAAATATGCTaGAGCAGTATAAGGAAATGC | + |
Preference number: 4 (lower is better) Translates to: FFQIGSLWLSWNSLVDQAEDQIC*SSIRKC Trigger: GCATTTCCTTATACTGCTGCAGCATATTTGATCTTC...AGCCTGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR CCA 90 bp | TTCTATTTGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTTCCAGGGTTAGTACTTaGTTCTTTTGTACCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: FYLVFPDRVSLAVLELTGSRVST*FFCTSA Trigger: TGCTGAGGTACAAAAGAACCAAGTACTAACCCTGGA...ACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR GCA 90 bp | GGTTGGTTTTCTATTTGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACGAAGATCAAATATGCTaGAGCAGTATAAGGAAATGC | + |
Preference number: 4 (lower is better) Translates to: GWFSIWFFQIGSLWLSWNEDQIC*SSIRKC Trigger: GCATTTCCTTATACTGCTGCAGCATATTTGATCTTC...GTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAAAACCAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 |
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CDS-3UTR GCA 90 bp | GACATCCTCAGGAACAATCAGAACCTGAGTTGCCTAAACGTTTCAGAGAACATTCTTCAAGGCATTGCATaGTGCATTTTGTACCAAATA | + |
Preference number: 4 (lower is better) Translates to: DILRNNQNLSCLNVSENILQGIA*CILYQI Trigger: TATTTGGTACAAAATGCAGCATGCAATGCCTTGAAG...AATGTTCTCTGAAACGTTTAGGCAACTCAGGTTCTGATTGTTCCTGAGGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CAA 72 bp | TTTTCGAGGATGAATATAATCATCTTGAGAACCTTCTaGTACCAAAGGGAACTGAAAAGAAGCCACACGTGG | + |
Preference number: 4 (lower is better) Translates to: FSRMNIIILRTF*YQRELKRSHTW Trigger: CCACGTGTGGCTTCTTTTCAGTTCCCTTTGGTACAAGAAGGTTCTCAAGATGATTATATTCATCCTCGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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3UTR CAA 72 bp | GAAAAATTAAGTGATTGTATTTTTAACTGTGATGGTTaGTATATGCTCAGCCAAGGGAGTGGCACTATTAGA | + |
Preference number: 4 (lower is better) Translates to: EKLSDCIFNCDG*YMLSQGSGTIR Trigger: TCTAATAGTGCCACTCCCTTGGCTGAGCATATACAAACCATCACAGTTAAAAATACAATCACTTAATTTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS CCA 90 bp | TGTCTCTCCGGGTCCCTCCTGCTGACTCTTGCAGAGGCTGAGGTCTaGCTGTCTCTGCTAGGTAGTGCCACCGCTGCTGATTCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: CLSGSLLLTLAEAEV*LSLLGSATAADSTS Trigger: GGAGGTGGAATCAGCAGCGGTGGCACTACCTAGCAGAGACAGCCAGACCTCAGCCTCTGCAAGAGTCAGCAGGAGGGACCCGGAGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS-3UTR CAA 90 bp | TTCTATTTGGTTTTTCCAGATAGGGTCTCTCTGGCTGTCTTGGAACTCACTGGTTACCTCTTCAAGGCATaGCATGCTGCATTTTGTACC | + |
Preference number: 5 (lower is better) Translates to: FYLVFPDRVSLAVLELTGYLFKA*HAAFCT Trigger: GGTACAAAATGCAGCATGCAATGCCTTGAAGAGGTA...ACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS GCA 90 bp | CAGGCTTTATGCCTTTCTTCCAAAGCATCTACCTCTTCAAGGCATTaGATGCTGCATTTTGTACCAAATAACCTTTTAAGTTCAGCAGAT | + |
Preference number: 5 (lower is better) Translates to: QALCLSSKASTSSRH*MLHFVPNNLLSSAD Trigger: ATCTGCTGAACTTAAAAGGTTATTTGGTACAAAATGCAGCATGCAATGCCTTGAAGAGGTAGATGCTTTGGAAGAAAGGCATAAAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |
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CDS CCA 72 bp | GGGTCCCTCCTGCTGACTCTTGCAGAGGCTGAGGTCTaGCTGTCTCTGCTAGGTAGTGCCACCGCTGCTGAT | + |
Preference number: 6 (lower is better) Translates to: GSLLLTLAEAEV*LSLLGSATAAD Trigger: ATCAGCAGCGGTGGCACTACCTAGCAGAGACAGCCAGACCTCAGCCTCTGCAAGAGTCAGCAGGAGGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS TCA 72 bp | AGAACTTTTCCTGGTGTCTCTCCGGGTCCCTCCTGCTaGCTCTTGCAGAGGCTGAGGTCTGGCTGTCTCTGC | + |
Preference number: 6 (lower is better) Translates to: RTFPGVSPGPSC*LLQRLRSGCLC Trigger: GCAGAGACAGCCAGACCTCAGCCTCTGCAAGAGTCAGCAGGAGGGACCCGGAGAGACACCAGGAAAAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS TCA 72 bp | CTAGGTAGTGCCACCGCTGCTGATTCCACCTCCATATaGATGCTGGGACCCAAACCTGTGTGTTCAAATAAC | + |
Preference number: 6 (lower is better) Translates to: LGSATAADSTSI*MLGPKPVCSNN Trigger: GTTATTTGAACACACAGGTTTGGGTCCCAGCATTCATATGGAGGTGGAATCAGCAGCGGTGGCACTACCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS GCA 72 bp | GTAGTGCCACCGCTGCTGATTCCACCTCCATATGAATaGTGGGACCCAAACCTGTGTGTTCAAATAACCTTT | + |
Preference number: 6 (lower is better) Translates to: VVPPLLIPPPYE*WDPNLCVQITF Trigger: AAAGGTTATTTGAACACACAGGTTTGGGTCCCAGCATTCATATGGAGGTGGAATCAGCAGCGGTGGCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224970.2 |
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CDS TCA 72 bp | TGGTACCATCCACGGGTTGTAGACAATTTTTGTCTCTaGGGTTGGTGTCTCCAGTGCCTAAGTGGAAAGACA | + |
Preference number: 6 (lower is better) Translates to: WYHPRVVDNFCL*GWCLQCLSGKT Trigger: TGTCTTTCCACTTAGGCACTGGAGACACCAACCTCAGAGACAAAAATTGTCTACAACCCGTGGATGGTACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124948.2 |
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CDS CCA 72 bp | ACCCACTTCTCTTTCCAGTCTTCCAGGGTTAGTACTTaGTTCTTTTGTACCTCAGCATCAGGGTGCTCTTTC | + |
Preference number: 6 (lower is better) Translates to: THFSFQSSRVST*FFCTSASGCSF Trigger: GAAAGAGCACCCTGATGCTGAGGTACAAAAGAACCAAGTACTAACCCTGGAAGACTGGAAAGAGAAGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021806.11 ENSMUST00000110118.8 ENSMUST00000124948.2 ENSMUST00000136864.8 ENSMUST00000151509.9 ENSMUST00000154802.2 |
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CDS CCA 72 bp | CCTCAGCATCAGGGTGCTCTTTCATATCAAGGGACATaGTACCATCCACGGGTTGTAGACAATTTTTGTCTC | + |
Preference number: 6 (lower is better) Translates to: PQHQGALSYQGT*YHPRVVDNFCL Trigger: GAGACAAAAATTGTCTACAACCCGTGGATGGTACCATGTCCCTTGATATGAAAGAGCACCCTGATGCTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124948.2 ENSMUST00000151509.9 |
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CDS GCA 72 bp | TGCCTTTCTTCCAAAGCATCTACCTCTTCAAGGCATTaGATGCTGCATTTTGTACCAAATAACCTTTTAAGT | + |
Preference number: 6 (lower is better) Translates to: CLSSKASTSSRH*MLHFVPNNLLS Trigger: ACTTAAAAGGTTATTTGGTACAAAATGCAGCATGCAATGCCTTGAAGAGGTAGATGCTTTGGAAGAAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021806.11 |