Pregenerated sensors for TPM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028464Ensembl transcript IDs: ENSMUST00000030184.12, ENSMUST00000107913.10, ENSMUST00000107914.10, ENSMUST00000150592.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTTCCTCAGGCTGCCCTCAGGCTGGCTGTGCAACGTGGCTAGCTaGTGCTCCTCCTGGCTGCCCCCTCCCCTCAGAGAGAATGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: VFLRLPSGWLCNVAS*CSSWLPPPLRENVK Trigger: CTTTACATTCTCTCTGAGGGGAGGGGGCAGCCAGGAGGAGCACCAGCTAGCCACGTTGCACAGCCAGCCTGAGGGCAGCCTGAGGAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 90 bp | GATAGATGGCAGGAGAAAAGCCAGTGCCAGAGTGGGTGGCAGGGGTaGCAGACGTGTTCCTCAGGCTGCCCTCAGGCTGGCTGTGCAACG | + |
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Preference number: 1 (lower is better) Translates to: DRWQEKSQCQSGWQG*QTCSSGCPQAGCAT Trigger: CGTTGCACAGCCAGCCTGAGGGCAGCCTGAGGAACACGTCTGCCACCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTGCCATCTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR TCA 90 bp | TGCAGGAGGGTCTGTGTGAGCCACAGTGTGCTGAGGGAGGAGGGCTaGGCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CRRVCVSHSVLREEG*ASQMEDGSKSQGLR Trigger: CCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGCTCAGCCCTCCTCCCTCAGCACACTGTGGCTCACACAGACCCTCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR GCA 90 bp | GGTGGAGGTCAGTGCATGGTAGATAGATGGCAGGAGAAAAGCCAGTaGCAGAGTGGGTGGCAGGGGTGGCAGACGTGTTCCTCAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GGGQCMVDRWQEKSQ*QSGWQGWQTCSSGC Trigger: GCAGCCTGAGGAACACGTCTGCCACCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTGCCATCTATCTACCATGCACTGACCTCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR TCA 90 bp | TGGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTaGTTATCAGAAAGTGCCAGGCTGGGAGTGCAGTGCAGGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: WAAEVGRKGVYSHMH*LSESARLGVQCRRV Trigger: GACCCTCCTGCACTGCACTCCCAGCCTGGCACTTTCTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR GCA 90 bp | GTGACTGGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATaGATTGATTATCAGAAAGTGCCAGGCTGGGAGTGCAGTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VTGLPRWGGRVCIAT*IDYQKVPGWECSAG Trigger: TCCTGCACTGCACTCCCAGCCTGGCACTTTCTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCCAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 90 bp | CCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTGACTaGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCAT | + |
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Preference number: 1 (lower is better) Translates to: PSDPGIPVKCAKVSD*AAEVGRKGVYSHMH Trigger: ATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCCAGTCACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 90 bp | GTGACACAGACAAAAACCATGTTAGGAATGTTAGGAGACACTTTATaGACCTGGGACTTGTTAGGGGACCTGGGACGTGTTAGGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: VTQTKTMLGMLGDTL*TWDLLGDLGRVRRP Trigger: AGGTCTCCTAACACGTCCCAGGTCCCCTAACAAGTCCCAGGTCCATAAAGTGTCTCCTAACATTCCTAACATGGTTTTTGTCTGTGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGAGTGCAGTGCAGGAGGGTCTGTGTGAGCCACAGTGTGCTGAGGGAGGACCAGGGACTCAGGAGTaGATCAGTGCTTTGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AGSAVQEGLCEPQCAEGGPGTQE*ISALKG Trigger: CCCTTTCAAAGCACTGATTCACTCCTGAGTCCCTGG...TCCTCCCTCAGCACACTGTGGCTCACACAGACCCTCCTGCACTGCACTCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR TCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCGTGTGCCAAGGTCAGTaGCTGGGCTGCCGAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSVCQGQ*LGCRGG Trigger: CCCACCTCGGCAGCCCAGTCACTGACCTTGGCACAC...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGGGAGAGAAAGGGGCCTaGGATGGCCACAGTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: ASQMEDGSKSQGLRSESVGEKGA*DGHSGD Trigger: GTCCCCACTGTGGCCATCGCAGGCCCCTTTCTCTCC...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTGATTATCAGAGTGGGTGGCAGGGGTaGCAGACGTGTTCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLPRWGGRVCIATCIDYQSGWQG*QTCSSG Trigger: GCCTGAGGAACACGTCTGCCACCCCTGCCACCCACT...CTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTGGAGAGAAAGGGGCCTaGGATGGCCACAGTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RQLCSLVGSRASPYRLLSGEKGA*DGHSGD Trigger: GTCCCCACTGTGGCCATCGCAGGCCCCTTTCTCTCC...ACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTGATTATCAGACGTGTTCCTCAGGCTaGCCTCAGGCTGGCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GLPRWGGRVCIATCIDYQTCSSG*PQAGCA Trigger: TGCACAGCCAGCCTGAGGGCAGCCTGAGGAACACGT...CTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCGTGCCAGGCTGGGAGTaGAGTGCAGGAGGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSVPGWE*SAGGSV Trigger: CACAGACCCTCCTGCACTGCACTCCCAGCCTGGCAC...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCTGCAACGTGGCTAGCTaGTGCTCCTCCTGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSCNVAS*CSSWLP Trigger: GGGCAGCCAGGAGGAGCACCAGCTAGCCACGTTGCA...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTCCCTCAGGCTGGCTGTaGAACGTGGCTAGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSPSGWL*NVASWC Trigger: GCACCAGCTAGCCACGTTGCACAGCCAGCCTGAGGG...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTCAGGAGAAAAGCCAGTaGCAGAGTGGGTGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RQLCSLVGSRASPYRLLSQEKSQ*QSGWQG Trigger: CCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTG...ACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGAGTGCAGTGCAGGAGGGTCTGTGTGAGCCACAGTGTGCTGAGGGAGGATCAGGAGTGAATCAGTaGTTTGAAAGGGAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: AGSAVQEGLCEPQCAEGGSGVNQ*FEREKG Trigger: GCCCTTCTCCCTTTCAAAGCACTGATTCACTCCTGA...TCCTCCCTCAGCACACTGTGGCTCACACAGACCCTCCTGCACTGCACTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AATCAGTGCTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGAGCATGGAGACCACCCTCAGGCTGGCTGTaGAACGTGGCTAGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: NQCFEREKGFRSRRAWRPPSGWL*NVASWC Trigger: GCACCAGCTAGCCACGTTGCACAGCCAGCCTGAGGG...TGGTCTCCATGCTCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | AATCAGTGCTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGAGCATGGAGACCATGCAACGTGGCTAGCTaGTGCTCCTCCTGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: NQCFEREKGFRSRRAWRPCNVAS*CSSWLP Trigger: GGGCAGCCAGGAGGAGCACCAGCTAGCCACGTTGCA...TGGTCTCCATGCTCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AATCAGTGCTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGAGCATGGAGACCACAGGAGAAAAGCCAGTaGCAGAGTGGGTGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NQCFEREKGFRSRRAWRPQEKSQ*QSGWQG Trigger: CCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTG...TGGTCTCCATGCTCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACCTGGGACGTGTTAGGAGACCTGGGACATGTTAGGAGACCTGGGATGTGTCAGACCTGCAGATGCTaGAAAAGCCCCTCTTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GTWDVLGDLGHVRRPGMCQTCRC*KSPSCR Trigger: TCTACAAGAGGGGCTTTTGCAGCATCTGCAGGTCTG...ACACATCCCAGGTCTCCTAACATGTCCCAGGTCTCCTAACACGTCCCAGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTAGTGGGTGGCAGGGGTaGCAGACGTGTTCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: REPWTGEGDTDKNHVRNVSGWQG*QTCSSG Trigger: GCCTGAGGAACACGTCTGCCACCCCTGCCACCCACT...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGACAGAAAGTGCCAGGCTaGGAGTGCAGTGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRQKVPG*ECSAGG Trigger: CCCTCCTGCACTGCACTCCCAGCCTGGCACTTTCTG...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTTTCCCTCTCAGCAATaGCCTCAGATCCTGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: RQLCSLVGSRASPYRLLSFPSQQ*PQILES Trigger: GGATTCCAGGATCTGAGGGCATTGCTGAGAGGGAAA...ACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTCAGAAAGTGCCAGGCTaGGAGTGCAGTGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: REPWTGEGDTDKNHVRNVQKVPG*ECSAGG Trigger: CCCTCCTGCACTGCACTCCCAGCCTGGCACTTTCTG...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCAAGGTCAGACAGACATaGGACAGAAAACAGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSKVRQT*DRKQTC Trigger: GCAGGTCTGTTTTCTGTCCCATGTCTGTCTGACCTT...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGACCAGGGACTCAGGAGTaGATCAGTGCTTTGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRPGTQE*ISALKG Trigger: CCCTTTCAAAGCACTGATTCACTCCTGAGTCCCTGG...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTTGCATGGTAGATAGATaGCAGGAGAAAAGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSCMVDR*QEKSQC Trigger: GCACTGGCTTTTCTCCTGCCATCTATCTACCATGCA...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR CCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCCGGAGTAGAAGAGCATaGAGACCAAGTTCAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSRSRRA*RPSSEF Trigger: AAACTCTGAACTTGGTCTCCATGCTCTTCTACTCCG...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGAAGTGAATCAGTGCTTTaGAAGGGAGAAGGGCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRSESVL*KGEGLP Trigger: CGGAAGCCCTTCTCCCTTTCAAAGCACTGATTCACT...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR TCA 90 bp | CAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTTCCTATAGCCACATGCATTaGTTATCAGAAAGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLCSLVGSRASPYRLLSSYSHMH*LSESAR Trigger: CCTGGCACTTTCTGATAATCAATGCATGTGGCTATA...GGAACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCTTGATTATCAGAAAGTaGCAGGCTGGGAGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTLIIRK*QAGSAV Trigger: CACTGCACTCCCAGCCTGGCACTTTCTGATAATCAA...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTTTTCCCTCTCAGCAATaGCCTCAGATCCTGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: REPWTGEGDTDKNHVRNVFPSQQ*PQILES Trigger: GGATTCCAGGATCTGAGGGCATTGCTGAGAGGGAAA...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR-3UTR GCA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCGTGTGTATAGCCACATaGATTGATTATCAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTVCIAT*IDYQKV Trigger: CACTTTCTGATAATCAATGCATGTGGCTATACACAC...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 72 bp | GGGGTGGCAGACGTGTTCCTCAGGCTGCCCTCAGGCTaGCTGTGCAACGTGGCTAGCTGGTGCTCCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GVADVFLRLPSG*LCNVASWCSSW Trigger: CCAGGAGGAGCACCAGCTAGCCACGTTGCACAGCCAGCCTGAGGGCAGCCTGAGGAACACGTCTGCCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR GCA 72 bp | AGTGGGTGGCAGGGGTGGCAGACGTGTTCCTCAGGCTaGCCTCAGGCTGGCTGTGCAACGTGGCTAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SGWQGWQTCSSG*PQAGCATWLAG Trigger: ACCAGCTAGCCACGTTGCACAGCCAGCCTGAGGGCAGCCTGAGGAACACGTCTGCCACCCCTGCCACCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 72 bp | GATAGATGGCAGGAGAAAAGCCAGTGCCAGAGTGGGTaGCAGGGGTGGCAGACGTGTTCCTCAGGCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: DRWQEKSQCQSG*QGWQTCSSGCP Trigger: AGGGCAGCCTGAGGAACACGTCTGCCACCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTGCCATCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR TCA 72 bp | GTCTGTGTGAGCCACAGTGTGCTGAGGGAGGAGGGCTaGGCGTCACAGATGGAGGACGGCAGTAAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: VCVSHSVLREEG*ASQMEDGSKSQ Trigger: CTGGCTTTTACTGCCGTCCTCCATCTGTGACGCTCAGCCCTCCTCCCTCAGCACACTGTGGCTCACACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR GCA 72 bp | CAGTGCATGGTAGATAGATGGCAGGAGAAAAGCCAGTaGCAGAGTGGGTGGCAGGGGTGGCAGACGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: QCMVDRWQEKSQ*QSGWQGWQTCS Trigger: GGAACACGTCTGCCACCCCTGCCACCCACTCTGGCACTGGCTTTTCTCCTGCCATCTATCTACCATGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 72 bp | CCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTGACTaGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGC | + |
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Preference number: 3 (lower is better) Translates to: PGIPVKCAKVSD*AAEVGRKGVYS Trigger: GCTATACACACCCTTCCTCCCCACCTCGGCAGCCCAGTCACTGACCTTGGCACACTTAACTGGGATTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR GCA 72 bp | CTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATaGATTGATTATCAGAAAGTGCCAGGCTGGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LPRWGGRVCIAT*IDYQKVPGWEC Trigger: GCACTCCCAGCCTGGCACTTTCTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| 3UTR CCA 72 bp | GACTATCTAGACGCAAATCTTGCTCTAGGCCTTGGCTaGGGTAGTGACACTGGGATGGGGAGGCCTGTAACG | + |
|
Preference number: 3 (lower is better) Translates to: DYLDANLALGLG*GSDTGMGRPVT Trigger: CGTTACAGGCCTCCCCATCCCAGTGTCACTACCCCAGCCAAGGCCTAGAGCAAGATTTGCGTCTAGATAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| 3UTR TCA 72 bp | GAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTaGTTATCAGAAAGTGCCAGGCTGGGAGTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVGRKGVYSHMH*LSESARLGVQC Trigger: GCACTGCACTCCCAGCCTGGCACTTTCTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| 3UTR CCA 72 bp | TTAAGTGTGCCAAGGTCAGTGACTGGGCTGCCGAGGTaGGGAGGAAGGGTGTGTATAGCCACATGCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSVPRSVTGLPR*GGRVCIATCID Trigger: ATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCCAGTCACTGACCTTGGCACACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| 3UTR GCA 72 bp | ACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTaGTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TAVKARDSGVNQ*FEREKGFRSRR Trigger: TCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| 3UTR CCA 72 bp | ACAAAAACCATGTTAGGAATGTTAGGAGACACTTTATaGACCTGGGACTTGTTAGGGGACCTGGGACGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TKTMLGMLGDTL*TWDLLGDLGRV Trigger: AACACGTCCCAGGTCCCCTAACAAGTCCCAGGTCCATAAAGTGTCTCCTAACATTCCTAACATGGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGCCTCCTCCAGCTGTCTaGCTCGGCTCTCAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RRQLCSLVGSRASPYRLLPPPAV*LGSQPP Trigger: AGGTGGCTGAGAGCCGAGCCAGACAGCTGGAGGAGG...CAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR TCA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGTCCTCCTCTACGAGCTaGATGCGGCGGTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMEDGSKSQGLRSESVSSSTS*MRRFRE Trigger: CTCTCTGAACCGCCGCATTCAGCTCGTAGAGGAGGA...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTGATTATCAGGAGTCCTCAGCGATGTaGTTGGCTTCCTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPRWGGRVCIATCIDYQESSAM*LASFSC Trigger: GCAGCTGAAGGAAGCCAAGCACATCGCTGAGGACTC...CTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR TCA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGGGAATACTCCTCCTCTaGGGCTATCAGCGACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMEDGSKSQGLRSESVGILLL*GYQRLE Trigger: CTCAAGTCGCTGATAGCCTCAGAGGAGGAGTATTCC...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTGATTATCAGCCTCAGCGATGTGCTTaGCTTCCTTCAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPRWGGRVCIATCIDYQPQRCA*LPSAAS Trigger: AGATGCAGCTGAAGGAAGCCAAGCACATCGCTGAGG...CTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGGGATCACCAGCTTCCTaGCCACCTCCTCATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASQMEDGSKSQGLRSESVGSPAS*PPPHIC Trigger: GCAAATATGAGGAGGTGGCCAGGAAGCTGGTGATCC...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR TCA 90 bp | AGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGCTTTGAATCCTCCTCTACGAGCTaGATGCGGCGGTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWRTAVKARDSGVNQCFESSSTS*MRRFRE Trigger: CTCTCTGAACCGCCGCATTCAGCTCGTAGAGGAGGA...TTCAAAGCACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTAGGCTATCAGCGACTTaGGGGCTTGGTCCATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSRLSAT*GLGPWF Trigger: GAACCATGGACCAAGCCCTCAAGTCGCTGATAGCCT...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR GCA 90 bp | AGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGTCATCGGTCTTCAGCTTaGTTTTTGTCGGCTTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQLCSLVGSRASPYRLLSHRSSA*FLSASA Trigger: GGCCGAAGCCGACAAAAAGCAAGCTGAAGACCGATG...ACTCAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTCATCGGTCTTCAGCTTaGTTTTTGTCGGCTTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSHRSSA*FLSASA Trigger: GGCCGAAGCCGACAAAAAGCAAGCTGAAGACCGATG...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | CATGGAGACCAAGTTCAGAGTTTATTAAGTAGTGGAGGGGTGGAGGTCAGTGCACCTCTACGAGCTGAATaGGGCGGTTCAGAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGDQVQSLLSSGGVEVSAPLRAE*GGSERP Trigger: TGGCCTCTCTGAACCGCCGCATTCAGCTCGTAGAGG...TGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTCTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | AATCAGTGCTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGAGCATGGAGACCATGCTCTTCCTCCAGCTaGTTGCATCGGTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NQCFEREKGFRSRRAWRPCSSSS*LHRSSA Trigger: AGCTGAAGACCGATGCAAGCAGCTGGAGGAAGAGCA...TGGTCTCCATGCTCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | AGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGCTTTGAATTGGCTTCCTTCAGCTaGATCTCCTGCAGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RWRTAVKARDSGVNQCFELASFS*ISCSSI Trigger: GATGGAGCTGCAGGAGATGCAGCTGAAGGAAGCCAA...TTCAAAGCACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | CATGGAGACCAAGTTCAGAGTTTATTAAGTAGTGGAGGGGTGGAGGTCAGTGCAGAGTCCTCAGCGATGTaGTTGGCTTCCTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGDQVQSLLSSGGVEVSAESSAM*LASFSC Trigger: GCAGCTGAAGGAAGCCAAGCACATCGCTGAGGACTC...TGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGATGCTCCAGTTTCTCCTaGGCATCCTTCACGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRCSSFS*ASFTDS Trigger: CGAGTCCGTGAAGGATGCCCAGGAGAAACTGGAGCA...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCTGCTCCAGTTTCTCCTaGGCATCCTTCACGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTCSSFS*ASFTDS Trigger: CGAGTCCGTGAAGGATGCCCAGGAGAAACTGGAGCA...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGCGACTTGAGGGCTTaGTCCATGGTTCGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTSDLRA*SMVRSS Trigger: GGAGCTTCGAACCATGGACCAAGCCCTCAAGTCGCT...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGATTTGTCCTCTTTGGTaGAATACTTGTCCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRQLCSLVGSRASPYRLLICPLW*NTCPLG Trigger: CCCAAGCGGACAAGTATTCCACCAAAGAGGACAAAT...CAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107913.10 |
||
| 3UTR CAA 72 bp | TTAGGAATGTTAGGAGACACTTTATGGACCTGGGACTaGTTAGGGGACCTGGGACGTGTTAGGAGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGMLGDTLWTWD*LGDLGRVRRPG Trigger: CCCAGGTCTCCTAACACGTCCCAGGTCCCCTAACAAGTCCCAGGTCCATAAAGTGTCTCCTAACATTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCTGCTCTTCCTCCAGCTaGTTGCATCGGTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTCSSSS*LHRSSA Trigger: AGCTGAAGACCGATGCAAGCAGCTGGAGGAAGAGCA...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGATTGGCTTCCTTCAGCTaGATCTCCTGCAGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRLASFS*ISCSSI Trigger: GATGGAGCTGCAGGAGATGCAGCTGAAGGAAGCCAA...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR GCA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGGTACTTCATCTTCTGTaGATAGACTTCATCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMEDGSKSQGLRSESVVLHLL*IDFIFQ Trigger: CTGGAAGATGAAGTCTATGCACAGAAGATGAAGTAC...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTCCTCAGCGATGTGCTTaGCTTCCTTCAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: REPWTGEGDTDKNHVRNVPQRCA*LPSAAS Trigger: AGATGCAGCTGAAGGAAGCCAAGCACATCGCTGAGG...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTATTTGTCCTCTTTGGTaGAATACTCCTCCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSICPLW*NTPPLR Trigger: CCTCAGAGGAGGAGTATTCCACCAAAGAGGACAAAT...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTCGTATTTGTCCTCTTTaGTGGAATACTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSRICPL*WNTPPL Trigger: CAGAGGAGGAGTATTCCACCAAAGAGGACAAATACG...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR GCA 90 bp | AGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGCTTTGAAGTACTTCATCTTCTGTaGATAGACTTCATCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWRTAVKARDSGVNQCFEVLHLL*IDFIFQ Trigger: CTGGAAGATGAAGTCTATGCACAGAAGATGAAGTAC...TTCAAAGCACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTCGTATTTGTCCTCTTTaGTGGAATACTTGTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REPWTGEGDTDKNHVRNVRICPL*WNTCPL Trigger: AAGCGGACAAGTATTCCACCAAAGAGGACAAATACG...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGGACGTGTTAGGAGACCTGGGACATGTTAGGAGACCTGGGATGTGTGCATCGGTCTTCAGCTaGCTTTTTGTCGGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTWDVLGDLGHVRRPGMCASVFS*LFVGFG Trigger: GCCGAAGCCGACAAAAAGCAAGCTGAAGACCGATGC...ACACATCCCAGGTCTCCTAACATGTCCCAGGTCTCCTAACACGTCCCAGGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GGGCTGCCGAGGTGGGGAGGAAGGGTGTGTATAGCCACATGCATTGATTATCAGGCATCGGTCTTCAGCTaGCTTTTTGTCGGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLPRWGGRVCIATCIDYQASVFS*LFVGFG Trigger: GCCGAAGCCGACAAAAAGCAAGCTGAAGACCGATGC...CTGATAATCAATGCATGTGGCTATACACACCCTTCCTCCCCACCTCGGCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGTCTTCCTCCAGCTGCTaGCATCGGTCTTCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASQMEDGSKSQGLRSESVSSSSC*HRSSAC Trigger: GCAAGCTGAAGACCGATGCAAGCAGCTGGAGGAAGA...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGTCCTCAGCGATGTGCTaGGCTTCCTTCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ASQMEDGSKSQGLRSESVSSAMC*ASFSCI Trigger: GATGCAGCTGAAGGAAGCCAAGCACATCGCTGAGGA...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAGTGCAGTGCAGGAGGGTCTGTGTGAGCCACAGTGTGCTGAGGGAGGATCGTATTTGTCCTCTTaGGTGGAATACTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSAVQEGLCEPQCAEGGSYLSS*VEYSSS Trigger: AGAGGAGGAGTATTCCACCAAAGAGGACAAATACGA...TCCTCCCTCAGCACACTGTGGCTCACACAGACCCTCCTGCACTGCACTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCAACTATGTAGTCTGGTAGGCAGCAGGGCCAGCCCTTACAGGTTGTTGAGGGAAGTGATGTCATaGAGTGCGTTGTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRQLCSLVGSRASPYRLLREVMS*SALSSS Trigger: GGAGCTGGACAACGCACTCAATGACATCACTTCCCT...CAACAACCTGTAAGGGCTGGCCCTGCTGCCTACCAGACTACATAGTTGCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GCGTCACAGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGAGGGAAGTGATGTCATaGAGTGCGTTGTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASQMEDGSKSQGLRSESVREVMS*SALSSS Trigger: GGAGCTGGACAACGCACTCAATGACATCACTTCCCT...CACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCTGTGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | AGATGGAGGACGGCAGTAAAAGCCAGGGACTCAGGAGTGAATCAGTGCTTTGAATCTTCAGCTTGCTTTTaGTCGGCTTCGGCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWRTAVKARDSGVNQCFESSACF*SASACS Trigger: GGAGCAGGCCGAAGCCGACAAAAAGCAAGCTGAAGA...TTCAAAGCACTGATTCACTCCTGAGTCCCTGGCTTTTACTGCCGTCCTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | AATCAGTGCTTTGAAAGGGAGAAGGGCTTCCGGAGTAGAAGAGCATGGAGACCATCCTCAGCGATGTGCTaGGCTTCCTTCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: NQCFEREKGFRSRRAWRPSSAMC*ASFSCI Trigger: GATGCAGCTGAAGGAAGCCAAGCACATCGCTGAGGA...TGGTCTCCATGCTCTTCTACTCCGGAAGCCCTTCTCCCTTTCAAAGCACTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | GCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCAGACAGCGACTTGAGGGCTaGGTCCATGGTTCGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAKAPLVEIQDFNDLHTRQRLEG*VHGSKL Trigger: GAGCTTCGAACCATGGACCAAGCCCTCAAGTCGCTG...TCTGGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030184.12 |
||
| CDS-3UTR CAA 90 bp | CATGGAGACCAAGTTCAGAGTTTATTAAGTAGTGGAGGGGTGGAGGTCAGTGCATCTTCAGCTTGCTTTTaGTCGGCTTCGGCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGDQVQSLLSSGGVEVSASSACF*SASACS Trigger: GGAGCAGGCCGAAGCCGACAAAAAGCAAGCTGAAGA...TGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | CATGGAGACCAAGTTCAGAGTTTATTAAGTAGTGGAGGGGTGGAGGTCAGTGCAGGAATACTTGTCCGCTaGGGCTTCCAGGGATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGDQVQSLLSSGGVEVSAGILVR*GFQGFQ Trigger: TTGAAATCCCTGGAAGCCCAAGCGGACAAGTATTCC...TGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTCTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107913.10 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGCAATGCCCTCAGATCCTGGAATCCCAGTTAAGTGTGCCAAGGTCAGTTTCTCCTCCAGAAGTTaGATCTCTTCTTCGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAMPSDPGIPVKCAKVSFSSRS*ISSSYL Trigger: CAAATACGAAGAAGAGATCAAACTTCTGGAGGAGAA...ACTGACCTTGGCACACTTAACTGGGATTCCAGGATCTGAGGGCATTGCTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| CDS-3UTR CAA 90 bp | AGGGAACCATGGACAGGGGAAGGTGACACAGACAAAAACCATGTTAGGAATGTTTCGTATTTGTCCTCTTaGGTGGAATACTTGTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: REPWTGEGDTDKNHVRNVSYLSS*VEYLSA Trigger: AGCGGACAAGTATTCCACCAAAGAGGACAAATACGA...AACATTCCTAACATGGTTTTTGTCTGTGTCACCTTCCCCTGTCCATGGTTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107913.10 |
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| CDS-3UTR CAA 90 bp | CATGGAGACCAAGTTCAGAGTTTATTAAGTAGTGGAGGGGTGGAGGTCAGTGCATTCTCCTCCAGAAGTTaGATCTCTTCTTCGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: HGDQVQSLLSSGGVEVSAFSSRS*ISSSYL Trigger: CAAATACGAAGAAGAGATCAAACTTCTGGAGGAGAA...TGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTCTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 |
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| CDS-3UTR CAA 90 bp | GATGCTGCAAAAGCCCCTCTTGTAGAGATCCAAGACTTTAACGACCTTCACACCTCCAGGGATTTCAAGTaGTTGGTAACAATTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: DAAKAPLVEIQDFNDLHTSRDFK*LVTIFS Trigger: GCTGAAAATTGTTACCAACAACTTGAAATCCCTGGA...GGTGTGAAGGTCGTTAAAGTCTTGGATCTCTACAAGAGGGGCTTTTGCAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107913.10 |
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| CDS GCA 72 bp | TACGAGCTGAATGCGGCGGTTCAGAGAGGCCACATCTaGTTCAGCGTCGGTGGCCTTCTTCTCAGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: YELNAAVQRGHI*FSVGGLLLSLL Trigger: GAGCAGGCTGAGAAGAAGGCCACCGACGCTGAAGCAGATGTGGCCTCTCTGAACCGCCGCATTCAGCTCGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030184.12 ENSMUST00000107913.10 ENSMUST00000107914.10 ENSMUST00000150592.2 |
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