Pregenerated sensors for TPH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006764Ensembl transcript IDs: ENSMUST00000006949.9
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGTGTTTCCTTCCAGAAGCTCTTCAGGAAGCTTGCCACAAATTaGTTTCAACGAGGTCAGTACAACCTATATATCCTGTTTATCAAA | + |
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Preference number: 1 (lower is better) Translates to: SSVSFQKLFRKLATN*FQRGQYNLYILFIK Trigger: TTTGATAAACAGGATATATAGGTTGTACTGACCTCGTTGAAACCAATTTGTGGCAAGCTTCCTGAAGAGCTTCTGGAAGGAAACACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR GCA 90 bp | AGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTaGTACAGATTTCAAAGTCACAGTTTGCTTAAGTTAACAGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: RKVPQLTDWNCARNV*YRFQSHSLLKLTVC Trigger: ACAAACTGTTAACTTAAGCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGACATACAGAATTGCATaGTTACTAGCCAACCATGAC | + |
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Preference number: 2 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWTYRIA*LLANHD Trigger: GTCATGGTTGGCTAGTAAGCATGCAATTCTGTATGT...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 90 bp | GTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGAATaGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSGPRKKSSTTHRLE*CEECLLQISKSQFA Trigger: AGCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGAATGGACATACAGAATTaGATGCTTACTAGCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: RKVPQLTDWNCARNVCYRMDIQN*MLTSQP Trigger: TGGTTGGCTAGTAAGCATGCAATTCTGTATGTCCAT...TCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CCA 90 bp | CCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCAGTTACACAGAGGTATaGACATACAGAATTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: PTGIVRGMFATDFKVTVCSYTEV*TYRIAC Trigger: GCATGCAATTCTGTATGTCCATACCTCTGTGTAACT...GCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGCTTGCATTGTCTGAACACTCAGTCTACATCCATCCCAACTGCTGTGTTCTTTCAAATGGTGAGTaGTTATCTGCATGGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLLALSEHSVYIHPNCCVLSNGE*LSAWVL Trigger: AAGAACCCATGCAGATAACCACTCACCATTTGAAAG...AACACAGCAGTTGGGATGGATGTAGACTGAGTGTTCAGACAATGCAAGCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR TCA 90 bp | CCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCAATGTCAACTCTACTTaGGATGTCCAAATAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: PTGIVRGMFATDFKVTVCNVNST*DVQIGS Trigger: TGATCCTATTTGGACATCTCAAGTAGAGTTGACATT...GCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACAGCTCTTCAGGAAGCTTaGCACAAATTGGTTTCAACG | + |
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Preference number: 2 (lower is better) Translates to: SLSKRSQKPAVIIHSILTALQEA*HKLVST Trigger: CGTTGAAACCAATTTGTGGCAAGCTTCCTGAAGAGC...TGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 90 bp | ACGAGGTCAGTACAACCTATATATCCTGTTTATCAAAACTTTTCTTaGCTTGCATTGTCTGAACACTCAGTCTACATCCATCCCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: TRSVQPIYPVYQNFS*LALSEHSVYIHPNC Trigger: GCAGTTGGGATGGATGTAGACTGAGTGTTCAGACAATGCAAGCAAAGAAAAGTTTTGATAAACAGGATATATAGGTTGTACTGACCTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 90 bp | TTCAAGTGTTTCCTTCCAGAAGCTCTTCAGGAAGCTTGCCACAAATaGGTTTCAACGAGGTCAGTACAACCTATATATCCTGTTTATCAA | + |
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Preference number: 2 (lower is better) Translates to: FKCFLPEALQEACHK*VSTRSVQPIYPVYQ Trigger: TTGATAAACAGGATATATAGGTTGTACTGACCTCGTTGAAACCAATTTGTGGCAAGCTTCCTGAAGAGCTTCTGGAAGGAAACACTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR TCA 90 bp | TCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTTCCACTTACTAGCCAACCATaGCACAGAAAGTTGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: SSLLFKLPEYSLFKCFLPLTSQP*HRKLLM Trigger: CATCAACAACTTTCTGTGTCATGGTTGGCTAGTAAG...TGGAAGGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACATTTGCTTGCATTGTCTaGACACTCAGTCTACATCCA | + |
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Preference number: 2 (lower is better) Translates to: SLSKRSQKPAVIIHSILTFACIV*TLSLHP Trigger: TGGATGTAGACTGAGTGTTCAGACAATGCAAGCAAA...TGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCAGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCGACACAGAAAGTTGTTaGTGTTGGATAACATTGACT | + |
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Preference number: 2 (lower is better) Translates to: VLSLSKRSQKPAVIIHSIDTESC*CWITLT Trigger: AGTCAATGTTATCCAACATCAACAACTTTCTGTGTC...GATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACTGAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAAGACAACTGCTGTGTTTCTaGACAGCTTCTGAAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: KACSDNSLYPNNTFTVPRQLLCF*TASEVE Trigger: TTCTACTTCAGAAGCTGTTCAGAAACACAGCAGTTG...TCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAAGATGTGCGAGGAATGTTTaGTACAGATTTCAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: KACSDNSLYPNNTFTVPRCARNV*YRFQSH Trigger: GTGACTTTGAAATCTGTAGCAAACATTCCTCGCACA...TCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 90 bp | TGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTaGCTTAAGTTAACAGTTTGTTCGCTAATCAGAAATGTCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: WNCARNVCYRFQSHS*LKLTVCSLIRNVNS Trigger: AGAGTTGACATTTCTGATTAGCGAACAAACTGTTAACTTAAGCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CCA 72 bp | TCCTTCCAGAAGCTCTTCAGGAAGCTTGCCACAAATTaGTTTCAACGAGGTCAGTACAACCTATATATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SFQKLFRKLATN*FQRGQYNLYIL Trigger: CAGGATATATAGGTTGTACTGACCTCGTTGAAACCAATTTGTGGCAAGCTTCCTGAAGAGCTTCTGGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR GCA 72 bp | AGGAAGAAAAGTTCCACAACTCACCGACTGGAATTGTaGGAGGAATGTTTGCTACAGATTTCAAAGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: RKKSSTTHRLEL*EECLLQISKSQ Trigger: CTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAGGAAGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGAAATGTCAACTCTACTaGAGATGTCCAAATAGGATC | + |
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Preference number: 3 (lower is better) Translates to: PRKKSSTTHRLELCEECLKCQLY*RCPNRI Trigger: GATCCTATTTGGACATCTCAAGTAGAGTTGACATTT...CAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR TCA 72 bp | GCATGCTTACTAGCCAACCATGACACAGAAAGTTGTTaGTGTTGGATAACATTGACTGCATTGTTGCTACAC | + |
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Preference number: 3 (lower is better) Translates to: ACLLANHDTESC*CWITLTALLLH Trigger: GTGTAGCAACAATGCAGTCAATGTTATCCAACATCAACAACTTTCTGTGTCATGGTTGGCTAGTAAGCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAAGAGAAGCTTGCCACAAATaGGTTTCAACGAGGTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: KACSDNSLYPNNTFTVPREACHK*VSTRSV Trigger: TACTGACCTCGTTGAAACCAATTTGTGGCAAGCTTC...TCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CAA 90 bp | GTTCTCAGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTTCCCGAATATTCTTaGTTCAAGTGTTTCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLSLSKRSQKPAVIIHSILPEYS*FKCFLP Trigger: TGGAAGGAAACACTTGAACAAAGAATATTCGGGAAG...GATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACTGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CAA 90 bp | GATTTTCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTTGTGCGAGGAATGTTaGCTACAGATTTCAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: DFHPFCLSFPNILCSSVSLCEEC*LQISKS Trigger: TGACTTTGAAATCTGTAGCAAACATTCCTCGCACAA...GGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR-3UTR CAA 90 bp | TCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTTCCAAAAACTTTTCTTTGCTaGCATTGTCTGAACACTCAG | + |
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Preference number: 3 (lower is better) Translates to: SSLLFKLPEYSLFKCFLPKTFLC*HCLNTQ Trigger: CTGAGTGTTCAGACAATGCAAGCAAAGAAAAGTTTT...TGGAAGGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGCCATACGCCCGCAGTTaGCCCTCTTGCTTGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWPYARS*PSCLQR Trigger: CCTTTGCAAGCAAGAGGGTCAACTGCGGGCGTATGG...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGCACGTGGCTAGTTTCTaGACGTCCTCATCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWHVASF*TSSSEA Trigger: AGCCTCAGATGAGGACGTTCAGAAACTAGCCACGTG...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGGAGTCGGGTAGAGTTTaGAGAGCTCCCGGAACACAA | + |
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Preference number: 4 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWESGRV*RAPGTQ Trigger: TTGTGTTCCGGGAGCTCTCCAAACTCTACCCGACTC...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CTAACTGAAGCAAATCCCTTTGTTTCTCTACGACTCCGTCTCCAACTCTTTGGACGCCAGGAAGTCTCTTaGGCTCAGGTAGCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LTEANPFVSLRLRLQLFGRQEVS*AQVASH Trigger: GTGGCTGGCTACCTGAGCCCAAGAGACTTCCTGGCG...TCCAAAGAGTTGGAGACGGAGTCGTAGAGAAACAAAGGGATTTGCTTCAGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGGAAGGGACGGGTAATTaGCTTTGCAAAGTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWEGTGN*LCKVPH Trigger: ATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTC...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR GCA 90 bp | CCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCACACTACCGCTGTCTTaGTGCTCTCTGTGGTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PTGIVRGMFATDFKVTVCTLPLS*CSLWCR Trigger: GCGACACCACAGAGAGCAGCAAGACAGCGGTAGTGT...GCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAACTCACCGACTGGAGGACAACCCTCTCCTaGCCCAGTATTTACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HRGKSQVQGRKVPQLTDWRTTLS*PSIYWK Trigger: TTTCCAGTAAATACTGGGCCAGGAGAGGGTTGTCCT...CCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCCAGGTAGCCAGCCACTaGTCTCACTGTGAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PTGIVRGMFATDFKVTVCQVASH*SHCEAR Trigger: TCTGGCTTCACAGTGAGACCAGTGGCTGGCTACCTG...GCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACCTGTGTACTCGACCCTaGGAATGGGCTGACCATATT | + |
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Preference number: 4 (lower is better) Translates to: QLTDWNCARNVCYRFQSHLCTRP*EWADHI Trigger: AATATGGTCAGCCCATTCCCAGGGTCGAGTACACAG...GTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTTGCTGTAGCCACAGTACTTaGTCAGCAGGGGGAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PTGIVRGMFATDFKVTVCCSHST*SAGGGF Trigger: AAAACCTCCCCCTGCTGACCAAGTACTGTGGCTACA...GCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATGTCCCAAGAGTTCATaGCATGTATCTGGTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RKVPQLTDWNCARNVCYRCPKSS*HVSGSG Trigger: CCCGGAACCAGATACATGCCATGAACTCTTGGGACA...TCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | CCAAGGAAGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGAAAACTGAGCAAACTTaGGATCCGCAAGCAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRKKSSTTHRLELCEECLKTEQT*DPQAVA Trigger: TGCCACTGCTTGCGGATCCCAAGTTTGCTCAGTTTT...CAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | ATTTTATCTAATGAACACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCATCTTGCTGCTCTCTGTaGTGTCGCCTTTGCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILSNEHRGKSQVQGRKVPSCCSL*CRLCRA Trigger: AGCCCGGCAAAGGCGACACCACAGAGAGCAGCAAGA...TGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTGTTCATTAGATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR GCA 90 bp | GTTCTCAGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTGTGTTCAAATCACTaGGCAGGTCCTGCACCACAT | + |
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Preference number: 4 (lower is better) Translates to: VLSLSKRSQKPAVIIHSILCSNH*AGPAPH Trigger: ATGTGGTGCAGGACCTGCGCAGTGATTTGAACACAG...GATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACTGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | CCAAGGAAGAAAAGTTCCACAACTCACCGACTGGAATaGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PRKKSSTTHRLE*CEECLLQISKS Trigger: TGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCTTCCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | TTCCTTCCAGAAGCTCTTCAGGAAGCTTGCCACAAATaGGTTTCAACGAGGTCAGTACAACCTATATATCCT | + |
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Preference number: 4 (lower is better) Translates to: FLPEALQEACHK*VSTRSVQPIYP Trigger: AGGATATATAGGTTGTACTGACCTCGTTGAAACCAATTTGTGGCAAGCTTCCTGAAGAGCTTCTGGAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | AAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAAGAGGCCGAACTCGATTGTaGAGAAATAGCACGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: KACSDNSLYPNNTFTVPRGRTRL*RNSTWL Trigger: TAGCCACGTGCTATTTCTTCACAATCGAGTTCGGCC...TCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | ATTCACTCTATCCTAACAATACATTCACAGTTCCAAGATTTTCATCCCTTCTGTCGTCCTGAAAGGTGGTaGTTAGGCATTCCTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IHSILTIHSQFQDFHPFCRPERW*LGIPAS Trigger: GCTTGCAGGAATGCCTAATCACCACCTTTCAGGACG...ACAGAAGGGATGAAAATCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACAGCTCTTTCAGAAACATaGAGACGTCTTCCAGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: SLSKRSQKPAVIIHSILTALSET*RRLPVA Trigger: CGCAACTGGAAGACGTCTCCATGTTTCTGAAAGAGC...TGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGACGATATGAAGCATGTTaGCATGTTTTTCCTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: RKVPQLTDWNCARNVCYRRYEAC*HVFPGI Trigger: TATTCCAGGAAAAACATGTCAACATGCTTCATATCG...TCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR GCA 90 bp | GATTTTCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTCACTGCGCAGGTCCTaGACCACATTCTCAATACTT | + |
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Preference number: 4 (lower is better) Translates to: DFHPFCLSFPNILCSSVSSLRRS*TTFSIL Trigger: AAGTATTGAGAATGTGGTGCAGGACCTGCGCAGTGA...GGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | TCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAACTCGACCCTGGGAATaGGCTGACCATATTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKACSDNSLYPNNTFTVPTRPWE*ADHIYS Trigger: GCTATAAATATGGTCAGCCCATTCCCAGGGTCGAGT...TGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | AAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAAGAGCTTCAATTCTCCGATaGACGAAAGTAACCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KACSDNSLYPNNTFTVPRASILR*TKVTLL Trigger: GAGCAGGGTTACTTTCGTCCATCGGAGAATTGAAGC...TCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR TCA 90 bp | ATTTTATCTAATGAACACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCAGTCACAATGGTGGTCTaGAATTTCAGCAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILSNEHRGKSQVQGRKVPVTMVV*NFSNWM Trigger: CATCCAGTTGCTGAAATTTCAGACCACCATTGTGAC...TGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTGTTCATTAGATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | ATTTTATCTAATGAACACAGAGGAAAGTCTCAGGTCCAAGGAAGAAAAGTTCCACAAGCAGGTCGTCTTTaGGTCAAAGGATTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ILSNEHRGKSQVQGRKVPQAGRL*VKGFHT Trigger: TGTGTGAAATCCTTTGACCCAAAGACGACCTGCTTG...TGGAACTTTTCTTCCTTGGACCTGAGACTTTCCTCTGTGTTCATTAGATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCCACAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGACAAATCCCCAGATATTaGTTCATTTTATTCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKVPQLTDWNCARNVCYRQIPRY*FILFKA Trigger: TGCCTTGAATAAAATGAACCAATATCTGGGGATTTG...TCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTGTGGAACTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | TCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCAGATTCAGGGTCACAATaGTGGTCTGAAATTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKACSDNSLYPNNTFTVPDSGSQ*WSEISA Trigger: TGCTGAAATTTCAGACCACCATTGTGACCCTGAATC...TGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGCAAAAGGAGTCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACATATTTTGTGTTAAGCTaGCAAGTAGCTGATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKRSQKPAVIIHSILTYFVLS*QVADDL Trigger: AAGATCATCAGCTACTTGGCAGCTTAACACAAAATA...TGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGACTCCTTTTGCTTAGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | GCGAGGAATGTTTGCTACAGATTTCAAAGTCACAGTTaGCTTAAGTTAACAGTTTGTTCGCTAATCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARNVCYRFQSHS*LKLTVCSLIRN Trigger: ATTTCTGATTAGCGAACAAACTGTTAACTTAAGCAAACTGTGACTTTGAAATCTGTAGCAAACATTCCTCGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | AACCTATATATCCTGTTTATCAAAACTTTTCTTTGCTaGCATTGTCTGAACACTCAGTCTACATCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLYILFIKTFLC*HCLNTQSTSIP Trigger: TGGGATGGATGTAGACTGAGTGTTCAGACAATGCAAGCAAAGAAAAGTTTTGATAAACAGGATATATAGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | AACAGTTTGTTCGCTAATCAGAAATGTCAACTCTACTaGAGATGTCCAAATAGGATCACAATCTTTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: NSLFANQKCQLY*RCPNRITIFQM Trigger: CATTTGAAAGATTGTGATCCTATTTGGACATCTCAAGTAGAGTTGACATTTCTGATTAGCGAACAAACTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| 3UTR CAA 72 bp | GTACAACCTATATATCCTGTTTATCAAAACTTTTCTTaGCTTGCATTGTCTGAACACTCAGTCTACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQPIYPVYQNFS*LALSEHSVYIH Trigger: ATGGATGTAGACTGAGTGTTCAGACAATGCAAGCAAAGAAAAGTTTTGATAAACAGGATATATAGGTTGTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CCA 90 bp | ATTCACTCTATCCTAACAATACATTCACAGTTCCAAGATTTTCATCCCTTCTGTTTGACATGTTTTTCCTaGAATAGTCTAAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSILTIHSQFQDFHPFCLTCFS*NSLSAF Trigger: GAAAGCACTTAGACTATTCCAGGAAAAACATGTCAA...ACAGAAGGGATGAAAATCTTGGAACTGTGAATGTATTGTTAGGATAGAGTGAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 90 bp | CCTGGATGGTCGGCATCAAGCTCGGTGCCGTACATGAGGACTCGGTaGGAGCATCTGTCTAACTCAGAGATCTTCCGAGGGAACCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGWSASSSVPYMRTR*EHLSNSEIFRGNHG Trigger: GCCGTGGTTCCCTCGGAAGATCTCTGAGTTAGACAGATGCTCTCACCGAGTCCTCATGTACGGCACCGAGCTTGATGCCGACCATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 90 bp | GAGGGAACCACGGCACATCCTCGAGATCTTCTTCCTCCGTCCAAATaGTCTCAGGCGGATTCAGGGTCACAATGGTGGTCTGAAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGTTAHPRDLLPPSK*SQADSGSQWWSEIS Trigger: TGAAATTTCAGACCACCATTGTGACCCTGAATCCGCCTGAGAGCATTTGGACGGAGGAAGAAGATCTCGAGGATGTGCCGTGGTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | CAACTCACCGACTGGAATTGTGCGAGGAATGTTTGCTACAGATTTCAAAGTCACCCGCCAGGAAGTCTCTaGGGCTCAGGTAGCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLTDWNCARNVCYRFQSHPPGSL*GSGSQP Trigger: TGGCTGGCTACCTGAGCCCAAGAGACTTCCTGGCGG...GTGACTTTGAAATCTGTAGCAAACATTCCTCGCACAATTCCAGTCGGTGAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 90 bp | ATTTCACACACGCCTTGTCGGAAAGAGCATGCTTCAATTCTCCGATaGACGAAAGTAACCCTGCTCCATACGCCCGCAGTTGACCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISHTPCRKEHASILR*TKVTLLHTPAVDPL Trigger: AAGAGGGTCAACTGCGGGCGTATGGAGCAGGGTTACTTTCGTCCATCGGAGAATTGAAGCATGCTCTTTCCGACAAGGCGTGTGTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | CTAACTGAAGCAAATCCCTTTGTTTCTCTACGACTCCGTCTCCAACTCTTTGGACCTTTGCCGGGCTCTTaGCCGCTTTTCTTGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LTEANPFVSLRLRLQLFGPLPGS*PLFLSS Trigger: CGAGGACAAGAAAAGCGGCAAAGAGCCCGGCAAAGG...TCCAAAGAGTTGGAGACGGAGTCGTAGAGAAACAAAGGGATTTGCTTCAGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 90 bp | TCCGTCCAAATGCTCTCAGGCGGATTCAGGGTCACAATGGTGGTCTaGAATTTCAGCAACTGGATGAGCTCATTGAATTCCGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQMLSGGFRVTMVV*NFSNWMSSLNSVLP Trigger: TGGCAAAACGGAATTCAATGAGCTCATCCAGTTGCTGAAATTTCAGACCACCATTGTGACCCTGAATCCGCCTGAGAGCATTTGGACGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | TCAAAAGCCTGCAGTGATAATTCACTCTATCCTAACAATACATTCACAGTTCCACCGCAGTTGACCCTCTaGCTTGCAAAGGCCGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SKACSDNSLYPNNTFTVPPQLTL*LAKAEL Trigger: GAGTTCGGCCTTTGCAAGCAAGAGGGTCAACTGCGG...TGGAACTGTGAATGTATTGTTAGGATAGAGTGAATTATCACTGCAGGCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | GATTTTCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTCCATACGCCCGCAGTaGACCCTCTTGCTTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DFHPFCLSFPNILCSSVSSIRPQ*TLLLAK Trigger: CTTTGCAAGCAAGAGGGTCAACTGCGGGCGTATGGA...GGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 90 bp | ATTTCGACTTCAGAACTTCTTCGTCGGGACCTCCTGGATTCGATATaGAGCATGTTGACATGTTTTTCCTGGAATAGTCTAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISTSELLRRDLLDSI*SMLTCFSWNSLSAF Trigger: GAAAGCACTTAGACTATTCCAGGAAAAACATGTCAACATGCTTCATATCGAATCCAGGAGGTCCCGACGAAGAAGTTCTGAAGTCGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 90 bp | TTATTCAAGGCATCACACACTGTGTTCAAATCACTGCGCAGGTCCTaGACCACATTCTCAATACTTCTGGTGTCTTTCAGAATTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LFKASHTVFKSLRRS*TTFSILLVSFRISM Trigger: CATTGAAATTCTGAAAGACACCAGAAGTATTGAGAATGTGGTGCAGGACCTGCGCAGTGATTTGAACACAGTGTGTGATGCCTTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 90 bp | ATTGGTTCATTTTATTCAAGGCATCACACACTGTGTTCAAATCACTaGGCAGGTCCTGCACCACATTCTCAATACTTCTGGTGTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGSFYSRHHTLCSNH*AGPAPHSQYFWCLS Trigger: TGAAAGACACCAGAAGTATTGAGAATGTGGTGCAGGACCTGCGCAGTGATTTGAACACAGTGTGTGATGCCTTGAATAAAATGAACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | TCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTTCCATCTTTGCCGCTTTTCTaGTCCTCGCTTTTGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLFKLPEYSLFKCFLPSLPLF*SSLLIA Trigger: GGCTATCAAAAGCGAGGACAAGAAAAGCGGCAAAGA...TGGAAGGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS-3UTR CAA 90 bp | TCATCCCTTCTGTTTAAGCTTCCCGAATATTCTTTGTTCAAGTGTTTCCTTCCATCATTGAATTCCGTTTaGCCACATTCGCAGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLFKLPEYSLFKCFLPSLNSV*PHSQST Trigger: CGTGGACTGCGAATGTGGCAAAACGGAATTCAATGA...TGGAAGGAAACACTTGAACAAAGAATATTCGGGAAGCTTAAACAGAAGGGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 72 bp | TGTAGAGGGGGTCGGAGCCATGCCGCACGTACTGGGTaGAGTGGAATACTCTGTAGGCCAGGCCCGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRGGRSHAARTG*SGILCRPGPPG Trigger: TCCTGGCGGGCCTGGCCTACAGAGTATTCCACTGCACCCAGTACGTGCGGCATGGCTCCGACCCCCTCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | GTTGCGGCACGTTGTCTTCCCTGTAGCCACAGTACTTaGTCAGCAGGGGGAGGTTTTTCAGGTACTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VAARCLPCSHST*SAGGGFSGTPG Trigger: GCCGGGAGTACCTGAAAAACCTCCCCCTGCTGACCAAGTACTGTGGCTACAGGGAAGACAACGTGCCGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | GAATACTCTGTAGGCCAGGCCCGCCAGGAAGTCTCTTaGGCTCAGGTAGCCAGCCACTGGTCTCACTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EYSVGQARQEVS*AQVASHWSHCE Trigger: TTCACAGTGAGACCAGTGGCTGGCTACCTGAGCCCAAGAGACTTCCTGGCGGGCCTGGCCTACAGAGTATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 72 bp | CTACCGCTGTCTTGCTGCTCTCTGTGGTGTCGCCTTTaGCGGGCTCTTTGCCGCTTTTCTTGTCCTCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPLSCCSLWCRL*RALCRFSCPRF Trigger: AAAGCGAGGACAAGAAAAGCGGCAAAGAGCCCGGCAAAGGCGACACCACAGAGAGCAGCAAGACAGCGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CAA 72 bp | ACTACCGCTGTCTTGCTGCTCTCTGTGGTGTCGCCTTaGCCGGGCTCTTTGCCGCTTTTCTTGTCCTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TTAVLLLSVVSP*PGSLPLFLSSL Trigger: AAGCGAGGACAAGAAAAGCGGCAAAGAGCCCGGCAAAGGCGACACCACAGAGAGCAGCAAGACAGCGGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | TCGGCATCAAGCTCGGTGCCGTACATGAGGACTCGGTaGGAGCATCTGTCTAACTCAGAGATCTTCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SASSSVPYMRTR*EHLSNSEIFRG Trigger: CCCTCGGAAGATCTCTGAGTTAGACAGATGCTCTCACCGAGTCCTCATGTACGGCACCGAGCTTGATGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | TCAAGGAGAACACTACCGCTGTCTTGCTGCTCTCTGTaGTGTCGCCTTTGCCGGGCTCTTTGCCGCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRTLPLSCCSL*CRLCRALCRFS Trigger: AGAAAAGCGGCAAAGAGCCCGGCAAAGGCGACACCACAGAGAGCAGCAAGACAGCGGTAGTGTTCTCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | CGCCAGGAAGTCTCTTGGGCTCAGGTAGCCAGCCACTaGTCTCACTGTGAAGCCAGATCGCTCTTTCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQEVSWAQVASH*SHCEARSLFQK Trigger: TTTCTGAAAGAGCGATCTGGCTTCACAGTGAGACCAGTGGCTGGCTACCTGAGCCCAAGAGACTTCCTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | ATCCTGGATGGTCGGCATCAAGCTCGGTGCCGTACATaGGGACTCGGTGAGAGCATCTGTCTAACTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILDGRHQARCRT*GLGESICLTQR Trigger: TCTCTGAGTTAGACAGATGCTCTCACCGAGTCCTCATGTACGGCACCGAGCTTGATGCCGACCATCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | GCTCCCAGAGACGCTAAGCCTATCTCTTGGGAAAACTaGGCAAACTTGGGATCCGCAAGCAGTGGCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: APRDAKPISWEN*ANLGSASSGTC Trigger: ACACGTGCCACTGCTTGCGGATCCCAAGTTTGCTCAGTTTTCCCAAGAGATAGGCTTAGCGTCTCTGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | ATGGACGAAAGTAACCCTGCTCCATACGCCCGCAGTTaGCCCTCTTGCTTGCAAAGGCCGAACTCGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MDESNPAPYARS*PSCLQRPNSIV Trigger: CACAATCGAGTTCGGCCTTTGCAAGCAAGAGGGTCAACTGCGGGCGTATGGAGCAGGGTTACTTTCGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | ACGCCTTGTCGGAAAGAGCATGCTTCAATTCTCCGATaGACGAAAGTAACCCTGCTCCATACGCCCGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: TPCRKEHASILR*TKVTLLHTPAV Trigger: AACTGCGGGCGTATGGAGCAGGGTTACTTTCGTCCATCGGAGAATTGAAGCATGCTCTTTCCGACAAGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CCA 72 bp | CTTCCTCCTCTGTCGATAGACATTGTCCTTAAATCCTaGATGGTCGGCATCAAGCTCGGTGCCGTACATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPPLSIDIVLKS*MVGIKLGAVHE Trigger: CTCATGTACGGCACCGAGCTTGATGCCGACCATCCAGGATTTAAGGACAATGTCTATCGACAGAGGAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CAA 72 bp | CAGGTCGTCTTTGGGTCAAAGGATTTCACACACGCCTaGTCGGAAAGAGCATGCTTCAATTCTCCGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QVVFGSKDFTHA*SERACFNSPMD Trigger: GTCCATCGGAGAATTGAAGCATGCTCTTTCCGACAAGGCGTGTGTGAAATCCTTTGACCCAAAGACGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CAA 90 bp | TCCTGCAAGCAGGTCGTCTTTGGGTCAAAGGATTTCACACACGCCTaGTCGGAAAGAGCATGCTTCAATTCTCCGATGGACGAAAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCKQVVFGSKDFTHA*SERACFNSPMDESN Trigger: GTTACTTTCGTCCATCGGAGAATTGAAGCATGCTCTTTCCGACAAGGCGTGTGTGAAATCCTTTGACCCAAAGACGACCTGCTTGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | GTTGACCCTCTTGCTTGCAAAGGCCGAACTCGATTGTaGAGAAATAGCACGTGGCTAGTTTCTGAACGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VDPLACKGRTRL*RNSTWLVSERP Trigger: AGGACGTTCAGAAACTAGCCACGTGCTATTTCTTCACAATCGAGTTCGGCCTTTGCAAGCAAGAGGGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | AACTGTCCGAAACAAAGTAAGCGTCCTGAAAGGTGGTaGTTAGGCATTCCTGCAAGCAGGTCGTCTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NCPKQSKRPERW*LGIPASRSSLG Trigger: ACCCAAAGACGACCTGCTTGCAGGAATGCCTAATCACCACCTTTCAGGACGCTTACTTTGTTTCGGACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 72 bp | GCATCACACACTGTGTTCAAATCACTGCGCAGGTCCTaGACCACATTCTCAATACTTCTGGTGTCTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASHTVFKSLRRS*TTFSILLVSFR Trigger: TCTGAAAGACACCAGAAGTATTGAGAATGTGGTGCAGGACCTGCGCAGTGATTTGAACACAGTGTGTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS GCA 72 bp | TTTTATTCAAGGCATCACACACTGTGTTCAAATCACTaGGCAGGTCCTGCACCACATTCTCAATACTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FYSRHHTLCSNH*AGPAPHSQYFW Trigger: CCAGAAGTATTGAGAATGTGGTGCAGGACCTGCGCAGTGATTTGAACACAGTGTGTGATGCCTTGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS TCA 72 bp | TCAGAACTTCTTCGTCGGGACCTCCTGGATTCGATATaGAGCATGTTGACATGTTTTTCCTGGAATAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SELLRRDLLDSI*SMLTCFSWNSL Trigger: TAGACTATTCCAGGAAAAACATGTCAACATGCTTCATATCGAATCCAGGAGGTCCCGACGAAGAAGTTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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| CDS CAA 72 bp | AATTTCAGCAACTGGATGAGCTCATTGAATTCCGTTTaGCCACATTCGCAGTCCACGAAGATTTCGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NFSNWMSSLNSV*PHSQSTKISTS Trigger: TGAAGTCGAAATCTTCGTGGACTGCGAATGTGGCAAAACGGAATTCAATGAGCTCATCCAGTTGCTGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006949.9 |
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