Pregenerated sensors for TPH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040046Ensembl transcript IDs: ENSMUST00000049298.15, ENSMUST00000107669.9, ENSMUST00000168335.3, ENSMUST00000170251.8, ENSMUST00000172386.8
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGGCCATCCACTAATGATGGGCTGGGGAAAATGGCATCACCATaGGTCCAGCTCTGGCCAGTGTCAGACAACTCACCCATCAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: ERPSTNDGLGKMASP*VQLWPVSDNSPIKD Trigger: GTCTTTGATGGGTGAGTTGTCTGACACTGGCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGATGGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CCA 90 bp | GCTCTCCCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTTaGCCCTTCTCCATTCCCATCCCCATTTCCTACCCTCTGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: ALPRISTVSDTNCSL*PFSIPIPISYPLHH Trigger: GTGGTGCAGAGGGTAGGAAATGGGGATGGGAATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 90 bp | GCTCTAGCGCAAAGTCATCCACACTTCTGTTTCAGCGAGTCCCCTTaGAGTCTAGTGTGTGACTGTGCCTGGGCTGTCACACAGTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: ALAQSHPHFCFSESP*SLVCDCAWAVTQSV Trigger: TACTGACTGTGTGACAGCCCAGGCACAGTCACACACTAGACTTCAAGGGGACTCGCTGAAACAGAAGTGTGGATGACTTTGCGCTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 90 bp | TCCTCTGAAGCTCCAAGGGAAGCCAGGCCAATTTCTTGGGAGAATTaGGCAAAACTGGGTTCAGCCAAGAGAGGAACGTGGCCTAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: SSEAPREARPISWEN*AKLGSAKRGTWPRS Trigger: ACTCCTAGGCCACGTTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGGCTTCCCTTGGAGCTTCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
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| 3UTR GCA 90 bp | ATCCTCACAGCTCTCCCTCGCATAAGTACAGTCTCAGATACAAACTaGTCCCTTTGGCCCTTCTCCATTCCCATCCCCATTTCCTACCCT | + |
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Preference number: 1 (lower is better) Translates to: ILTALPRISTVSDTN*SLWPFSIPIPISYP Trigger: AGGGTAGGAAATGGGGATGGGAATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGGGAGAGCTGTGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR GCA 90 bp | ATGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTTGCATGCCTaGCTGCTCTCTATGGAGGCCAGAAAACACTGGATCCTCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: MGVFAACISVYHLHA*LLSMEARKHWILWN Trigger: GTTCCAGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR GCA 90 bp | GTGTATGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTTGCATaGCTGCCTGCTCTCTATGGAGGCCAGAAAACACTGGATCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VYGCFCCMHICVPLA*LPALYGGQKTLDPL Trigger: CAGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCATACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR GCA 90 bp | GTATGTGTATGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTTaGATGCCTGCCTGCTCTCTATGGAGGCCAGAAAACACTGGATCC | + |
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Preference number: 1 (lower is better) Translates to: VCVWVFLLHAYLCTT*MPACSLWRPENTGS Trigger: GGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCATACACATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CCA 90 bp | TCTGGAACTAGAGTTACAGATGGTTCTAAGCCACAGTGTGGATGCTaGGAAGCAAACCAGGGTCCTCTGGAAGAACAGCTGGTACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SGTRVTDGSKPQCGC*EANQGPLEEQLVLL Trigger: TAAGAGTACCAGCTGTTCTTCCAGAGGACCCTGGTTTGCTTCCCAGCATCCACACTGTGGCTTAGAACCATCTGTAACTCTAGTTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CCA 90 bp | GTGTGTACGGGTTGTACTTCAGTCCAAACGGGCGCTTCACGGTCTTaGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: VCTGCTSVQTGASRS*QILSSSPLHLQSSQ Trigger: CTGAGAGCTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCCGTTTGGACTGAAGTACAACCCGTACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR TCA 90 bp | CACAGTGAAAAAGTAGCACGTTGCCAGTTTTTGAACTGTCTCCTCTaGAGCTCCAAGGGAAGCCAGGCCAATTTCTTGGGAGAATTGAGC | + |
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Preference number: 1 (lower is better) Translates to: HSEKVARCQFLNCLL*SSKGSQANFLGELS Trigger: GCTCAATTCTCCCAAGAAATTGGCCTGGCTTCCCTTGGAGCTTCAGAGGAGACAGTTCAAAAACTGGCAACGTGCTACTTTTTCACTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
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| 3UTR GCA 90 bp | CACATACCTTCTCACTATATCCTAGGGTTACACCTTGAAACAAAGTaGCAGAAAGCACTGGCTGAGTCTTGGTGGCTTCTACGTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HIPSHYILGLHLETK*QKALAESWWLLRPC Trigger: ACAGGGACGTAGAAGCCACCAAGACTCAGCCAGTGCTTTCTGGCACTTTGTTTCAAGGTGTAACCCTAGGATATAGTGAGAAGGTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 90 bp | TGGGTTCCATTGAGGCATGTTCATACTTTGTCTAACCCCCAAGGCTaGTTCTTTGTACCAACCATCATCACTGCTAGGGTCTCTGAACTT | + |
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Preference number: 1 (lower is better) Translates to: WVPLRHVHTLSNPQG*FFVPTIITARVSEL Trigger: AAGTTCAGAGACCCTAGCAGTGATGATGGTTGGTACAAAGAATCAGCCTTGGGGGTTAGACAAAGTATGAACATGCCTCAATGGAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR GCA 90 bp | ATTCTTAGGTGTTTTGAAGACTCCAAGGCTCTTGGAACCCTGACTTaGCAAATATCACAGAAGCAGAGCAGAGACAAAGTCAAGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ILRCFEDSKALGTLT*QISQKQSRDKVKPF Trigger: GAAGGGCTTGACTTTGTCTCTGCTCTGCTTCTGTGATATTTGGCAAGTCAGGGTTCCAAGAGCCTTGGAGTCTTCAAAACACCTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 90 bp | AAAAGATTCTTAGGTGTTTTGAAGACTCCAAGGCTCTTGGAACCCTaGCTTGCCAAATATCACAGAAGCAGAGCAGAGACAAAGTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: KRFLGVLKTPRLLEP*LAKYHRSRAETKSS Trigger: GCTTGACTTTGTCTCTGCTCTGCTTCTGTGATATTTGGCAAGTCAGGGTTCCAAGAGCCTTGGAGTCTTCAAAACACCTAAGAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 90 bp | AGAGTGAAATGGACCACTGTTATCTTTTTATCCACTTCCTGGAAATaGACATACGGTCTCAGTTATTTAGTGCTTTTGAGAAGTCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RVKWTTVIFLSTSWK*TYGLSYLVLLRSPG Trigger: GCCAGGACTTCTCAAAAGCACTAAATAACTGAGACCGTATGTTCATTTCCAGGAAGTGGATAAAAAGATAACAGTGGTCCATTTCACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCACCCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCTCCCTCTCTCGAGACATTGCTAAGCTaGGAGCTGCTGTCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLTPFVCVCVCVCPPPSLETLLS*ELLSLP Trigger: GGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTC...GAGAGAGGGAGGAGGACACACACACACACACACACACACAAAGGGGGTGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCTGGGGAAAATGGCATCACCATGAGTCCAGCTCTGGCCAGTGTCAGACAGCCCTGGCTCTAGACTaGTGCTCAAAGGCTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: MGWGKWHHHESSSGQCQTALALD*CSKAFW Trigger: CCAAAAAGCCTTTGAGCATCAGTCTAGAGCCAGGGC...TGTCTGACACTGGCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGCCCTGGCTCTAGACTaGTGCTCAAAGGCTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VCPGHHVARELYFPQQVPALALD*CSKAFW Trigger: CCAAAAAGCCTTTGAGCATCAGTCTAGAGCCAGGGC...TGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
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| 3UTR CAA 90 bp | AGCTCTCCCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTaGGCCCTTCTCCATTCCCATCCCCATTTCCTACCCTCTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: SSPSHKYSLRYKLLP*ALLHSHPHFLPSAP Trigger: TGGTGCAGAGGGTAGGAAATGGGGATGGGAATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGGGAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTCTCTATGGAGGCCAGAAAACACTGGATCCTCTGGAACTAGAGTTACAGAAAATGGCATCACCATaGGTCCAGCTCTGGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PALYGGQKTLDPLELELQKMASP*VQLWPV Trigger: CACTGGCCAGAGCTGGACTCATGGTGATGCCATTTT...CTGTAACTCTAGTTCCAGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR CCA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGGAGACATTGCTAAGCTaGGAGCTGCTGTCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: ITWHVNYISLSRFQKTKQETLLS*ELLSLP Trigger: GGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTC...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGCTCTCTATGGAGGCCAGAAAACACTGGATCCTCTGGAACTAGAGTTAAGTGCCAGAAAGCACTaGCTGAGTCTTGGTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPALYGGQKTLDPLELELSARKH*LSLGGF Trigger: GAAGCCACCAAGACTCAGCCAGTGCTTTCTGGCACT...TAACTCTAGTTCCAGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CAA 90 bp | TGTATGTGTATGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTaGCATGCCTGCCTGCTCTCTATGGAGGCCAGAAAACACTGGATC | + |
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Preference number: 2 (lower is better) Translates to: CMCMGVFAACISVYH*HACLLSMEARKHWI Trigger: GATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCATACACATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGGCCCCAAAGACTGGGATCAAAGGGCTTaGCTTTGGCATGTCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RKCMFEFTDGRKQAGPKDWDQRA*LWHVQK Trigger: TTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCA...GTCTTTGGGGCCGGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGACATCAAGGTCATACCGCAACTCATTCATGGCACTAGTTATGCTCTTGGTGTCTCTGAGAACCTaGACACTCTGTGTGTACGGG | + |
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Preference number: 2 (lower is better) Translates to: LMTSRSYRNSFMALVMLLVSLRT*TLCVYG Trigger: CCCGTACACACAGAGTGTTCAGGTTCTCAGAGACAC...CAAGAGCATAACTAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGCCCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GNLGIKGLDFGMSRKCMFAQTPQ*KSSTLP Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGGC...AAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
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| 3UTR-3UTR TCA 90 bp | CATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAGAGAGTGAGTGATTaGATATGGAGAGAGGCGAGA | + |
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Preference number: 2 (lower is better) Translates to: HHVARELYFPQQVPEDKTERVSD*IWREAR Trigger: TCTCGCCTCTCTCCATATTCAATCACTCACTCTCTC...TGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCATCACTGATGACATCAAGGTCATACCGCAACTCATTCATGGCACTAGTGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: EGITDDIKVIPQLIHGTSGMSRK*MFEFTD Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...ACTAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTCATCAGTGATGCCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR CCA 90 bp | TCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGCTCTCAGGGCGCTTCACGGTCTTaGCAAATTCTCTCATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SRSWQILSSSPLHLQSSQGASRS*QILSSS Trigger: AGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCC...CTGAGAGCTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR CAA 90 bp | GTGATGAGACATTCCTGTTTACAGGCAATCTTGGGATCAAAGGGCTaGACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATG | + |
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Preference number: 2 (lower is better) Translates to: VMRHSCLQAILGSKG*TLACPESACLSSLM Trigger: CATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAGGAATGTCTCATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTGAACTGTAGGATCTTTCTGTCTCTGTCTCTGTCTCTGACTCTCTCTCTCAAGCAGTTCCAGGTGTaGATTTTCAGAGAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KLNCRIFLSLSLSLTLSLKQFQV*IFRESE Trigger: CTCACTCTCTCTGAAAATGCACACCTGGAACTGCTT...GAGAGAGAGAGTCAGAGACAGAGACAGAGACAGAAAGATCCTACAGTTCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CAA 90 bp | AGACATTCCTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTaGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RHSCLQAILGSKGLT*ACPESACLSSLMEE Trigger: TTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAGGAATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR TCA 90 bp | CATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACACATTTTCAGAGAGAGTaGGTGATTGAATATGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HHVARELYFPQQVPEDKTHFQRE*VIEYGE Trigger: CTCTCCATATTCAATCACTCACTCTCTCTGAAAATG...TGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTTTAGTCAGAGCACAACCAATTAAAAAGCCAATAAGTGATTCTTCAGCATGCGGACACCACATGTaGTCCAATCCTCACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SALVRAQPIKKPISDSSACGHHM*SNPHSS Trigger: AGAGCTGTGAGGATTGGAGCACATGTGGTGTCCGCA...TGCTGAAGAATCACTTATTGGCTTTTTAATTGGTTGTGCTCTGACTAAAGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR GCA 90 bp | TCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGCTCTCAGGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: SRSWQILSSSPLHLQSSQGMSRK*MFEFTD Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...CTGAGAGCTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGAAAAAGTAGCACGTTaGCAGTTTTTGAACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GNLGIKGLDFGMSRKCMFEKVAR*QFLNCL Trigger: GAGACAGTTCAAAAACTGGCAACGTGCTACTTTTTC...AAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAACTGTAGGATCTTTCTGTCTCTGTCTCTGTCTCTGACTCTCTCTCTCCATTTTCAGAGAGAGTaGGTGATTGAATATGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KLNCRIFLSLSLSLTLSLHFQRE*VIEYGE Trigger: CTCTCCATATTCAATCACTCACTCTCTCTGAAAATG...GAGAGAGAGAGTCAGAGACAGAGACAGAGACAGAAAGATCCTACAGTTCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTCTCCAGGAAAGAATTGCAAGCCTTGCTTTTTGTTTGAATCTGGCCTGGCTTTACAGTTTAAAGTaGTTTAGTCAGAGCACAACC | + |
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Preference number: 2 (lower is better) Translates to: MALQERIASLAFCLNLAWLYSLK*FSQSTT Trigger: GGTTGTGCTCTGACTAAAGCACTTTAAACTGTAAAG...CCAGGCCAGATTCAAACAAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR CCA 72 bp | CGTGGCATCCAGAGAGGCCATCCACTAATGATGGGCTaGGGAAAATGGCATCACCATGAGTCCAGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RGIQRGHPLMMG*GKWHHHESSSG Trigger: GCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGATGGCCTCTCTGGATGCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAGAGGCGAGAGACATaGCTAAGCTGGGAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VCPGHHVARELYFPQQVPERRET*LSWELL Trigger: CAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTC...TGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
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| 3UTR CCA 72 bp | CAGAGAGGCCATCCACTAATGATGGGCTGGGGAAAATaGCATCACCATGAGTCCAGCTCTGGCCAGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: QRGHPLMMGWGK*HHHESSSGQCQ Trigger: CTGACACTGGCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGATGGCCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 72 bp | TCCACTAATGATGGGCTGGGGAAAATGGCATCACCATaGGTCCAGCTCTGGCCAGTGTCAGACAACTCACCC | + |
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Preference number: 3 (lower is better) Translates to: STNDGLGKMASP*VQLWPVSDNSP Trigger: GGGTGAGTTGTCTGACACTGGCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR TCA 72 bp | ACTGGCTCAGCAAATAAAGGGGCTTGTGGCCAAGCCTaGCAACTGGAGTTTGATTCCTGGGGCCCACACACA | + |
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Preference number: 3 (lower is better) Translates to: TGSANKGACGQA*QLEFDSWGPHT Trigger: TGTGTGTGGGCCCCAGGAATCAAACTCCAGTTGTCAGGCTTGGCCACAAGCCCCTTTATTTGCTGAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR CAA 90 bp | CTTCAAAAAGTCAAGCACGCTGCTGCTGTCGAGGAATGGCTCTCCAGGAAAGAAGAGAGGCGAGAGACATaGCTAAGCTGGGAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LQKVKHAAAVEEWLSRKEERRET*LSWELL Trigger: CAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTC...TTCTTTCCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCACCCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCTCCCTCTCTCTACAAACTGCTCCCTTaGGCCCTTCTCCATTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLTPFVCVCVCVCPPPSLYKLLP*ALLHSH Trigger: ATGGGAATGGAGAAGGGCCAAAGGGAGCAGTTTGTA...GAGAGAGGGAGGAGGACACACACACACACACACACACACAAAGGGGGTGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGGGCCACCTGGTGACCCTAGCGAGGGCATCACTGATGACATCAAGGTCATGTTTACAGGCAATCTaGGGATCAAAGGGCTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLGHLVTLARASLMTSRSCLQAI*GSKGLT Trigger: AGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACA...TGACCTTGATGTCATCAGTGATGCCCTCGCTAGGGTCACCAGGTGGCCCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| 3UTR TCA 72 bp | CAAAGTCATCCACACTTCTGTTTCAGCGAGTCCCCTTaGAGTCTAGTGTGTGACTGTGCCTGGGCTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QSHPHFCFSESP*SLVCDCAWAVT Trigger: TGTGACAGCCCAGGCACAGTCACACACTAGACTTCAAGGGGACTCGCTGAAACAGAAGTGTGGATGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | CTGCATGCATATCTGTGTACCACTTGCATGCCTGCCTaGTCTCTATGGAGGCCAGAAAACACTGGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHAYLCTTCMPA*SLWRPENTGSS Trigger: AGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | TGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTTaGATGCCTGCCTGCTCTCTATGGAGGCCAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WVFLLHAYLCTT*MPACSLWRPEN Trigger: GTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | CTGCTGCTGTCGAGGAATGGCTCTCCAGGAAAGAATTaGAAGCCTTGCTTTTTGTTTGAATCTGGCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLSRNGSPGKN*KPCFLFESGLV Trigger: CACCAGGCCAGATTCAAACAAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CCA 72 bp | TATCTGTGTACCACTTGCATGCCTGCCTGCTCTCTATaGAGGCCAGAAAACACTGGATCCTCTGGAACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: YLCTTCMPACSL*RPENTGSSGTR Trigger: TCTAGTTCCAGAGGATCCAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR-3UTR CAA 90 bp | GCGAGGGCATCACTGATGACATCAAGGTCATACCGCAACTCATTCATGGCACTATTGGGATCAAAGGGCTaGACTTTGGCATGTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ARASLMTSRSYRNSFMALLGSKG*TLACPE Trigger: TTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAA...TAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTCATCAGTGATGCCCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| 3UTR TCA 72 bp | AAAGTAGCACGTTGCCAGTTTTTGAACTGTCTCCTCTaGAGCTCCAAGGGAAGCCAGGCCAATTTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KVARCQFLNCLL*SSKGSQANFLG Trigger: TCCCAAGAAATTGGCCTGGCTTCCCTTGGAGCTTCAGAGGAGACAGTTCAAAAACTGGCAACGTGCTACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| 3UTR GCA 72 bp | TGTTTTTGCTGCATGCATATCTGTGTACCACTTGCATaGCTGCCTGCTCTCTATGGAGGCCAGAAAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: CFCCMHICVPLA*LPALYGGQKTL Trigger: CAGTGTTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | TGTACTTCAGGTGATTTCAGAGCTAACGTATCTACTTaGGGACGGATGCGTGCTCACCAGCTGTTAAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CTSGDFRANVST*GRMRAHQLLKW Trigger: CCACTTTAACAGCTGGTGAGCACGCATCCGTCCGCAAGTAGATACGTTAGCTCTGAAATCACCTGAAGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR-3UTR CAA 90 bp | AATCCTCACAGCTCTCCCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTGTCTGACACAGCACTaGAAGCCAGCTTGCACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NPHSSPSHKYSLRYKLLPCLTQH*KPACTL Trigger: TAAAGTGCAAGCTGGCTTCAAGTGCTGTGTCAGACA...AGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGGGAGAGCTGTGAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR-3UTR CAA 90 bp | GACATCAAGGTCATACCGCAACTCATTCATGGCACTAGTTATGCTCTTGGTGTCTCTCAGCTGTCCATCTaGTTTGCACAGCCCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: DIKVIPQLIHGTSYALGVSQLSI*FAQPKL Trigger: GAGTTTGGGCTGTGCAAACAAGATGGACAGCTGAGA...GACACCAAGAGCATAACTAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| 3UTR GCA 72 bp | AAAAGCTTATACAACTGCTTATGCGGACACCACATGTaGTCCAATCCTCACAGCTCTCCCTCGCATAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KSLYNCLCGHHM*SNPHSSPSHKY Trigger: GTACTTATGCGAGGGAGAGCTGTGAGGATTGGAGCACATGTGGTGTCCGCATAAGCAGTTGTATAAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CCA 72 bp | CTTCAAAAAGTCAAGCACGCTGCTGCTGTCGAGGAATaGCTCTCCAGGAAAGAATTGCAAGCCTTGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQKVKHAAAVEE*LSRKELQALLF Trigger: AAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR TCA 72 bp | AGTTCCAGGTGTGCATTTTCAGAGAGAGTGAGTGATTaGATATGGAGAGAGGCGAGAGACATTGCTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSRCAFSERVSD*IWREARDIAKL Trigger: CAGCTTAGCAATGTCTCTCGCCTCTCTCCATATTCAATCACTCACTCTCTCTGAAAATGCACACCTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| 3UTR TCA 72 bp | TTAGGTGTTTTGAAGACTCCAAGGCTCTTGGAACCCTaGCTTGCCAAATATCACAGAAGCAGAGCAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LGVLKTPRLLEP*LAKYHRSRAET Trigger: TGTCTCTGCTCTGCTTCTGTGATATTTGGCAAGTCAGGGTTCCAAGAGCCTTGGAGTCTTCAAAACACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR TCA 72 bp | TTGAGGCATGTTCATACTTTGTCTAACCCCCAAGGCTaGTTCTTTGTACCAACCATCATCACTGCTAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRHVHTLSNPQG*FFVPTIITARV Trigger: GACCCTAGCAGTGATGATGGTTGGTACAAAGAATCAGCCTTGGGGGTTAGACAAAGTATGAACATGCCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | ATGAAGTTTGCTCTGTCACATTCTCCTATCATGCCTTaGTTCACCAGTGGCTTAAACCACGGGAACAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: MKFALSHSPIMP*FTSGLNHGNNF Trigger: GAAGTTGTTCCCGTGGTTTAAGCCACTGGTGAAGCAAGGCATGATAGGAGAATGTGACAGAGCAAACTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | TGTTTTGAAGACTCCAAGGCTCTTGGAACCCTGACTTaGCAAATATCACAGAAGCAGAGCAGAGACAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CFEDSKALGTLT*QISQKQSRDKV Trigger: GACTTTGTCTCTGCTCTGCTTCTGTGATATTTGGCAAGTCAGGGTTCCAAGAGCCTTGGAGTCTTCAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR GCA 72 bp | GCATTTGTGTTTTCTTCAAAAAGTCAAGCACGCTGCTaGTGTCGAGGAATGGCTCTCCAGGAAAGAATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFVFSSKSQARC*CRGMALQERIA Trigger: TGCAATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAAGAAAACACAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CCA 72 bp | TCTGTCACATTCTCCTATCATGCCTTGCTTCACCAGTaGCTTAAACCACGGGAACAACTTCTAATGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SVTFSYHALLHQ*LKPREQLLMDQ Trigger: TTGGTCCATTAGAAGTTGTTCCCGTGGTTTAAGCCACTGGTGAAGCAAGGCATGATAGGAGAATGTGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR TCA 72 bp | TATTTTAAATGTGTGTCCTGGGCATCACGTGGCACGTaGACTATATTTCCCTCAGCAGGTTCCAGAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: YFKCVSWASRGT*TIFPSAGSRRQ Trigger: TTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACACATTTAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| 3UTR TCA 72 bp | TCACCAGCTGTTAAAGTGGGTATGTTTCTAAAGATCTaGGACGGCTGGATTACACTTCCTTGTAGAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAVKVGMFLKI*DGWITLPCRAW Trigger: CCATGCTCTACAAGGAAGTGTAATCCAGCCGTCTCAGATCTTTAGAAACATACCCACTTTAACAGCTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR-3UTR CAA 90 bp | GATGACATCAAGGTCATACCGCAACTCATTCATGGCACTAGTTATGCTCTTGGTAATTTCTTGGGAGAATaGAGCAAAACTGGGTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DDIKVIPQLIHGTSYALGNFLGE*SKTGFS Trigger: GCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATT...ACCAAGAGCATAACTAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| 3UTR GCA 72 bp | TTTGTTACAGTAGTGAAAAGCTTATACAACTGCTTATaGGGACACCACATGTGCTCCAATCCTCACAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FVTVVKSLYNCL*GHHMCSNPHSS Trigger: AGAGCTGTGAGGATTGGAGCACATGTGGTGTCCGCATAAGCAGTTGTATAAGCTTTTCACTACTGTAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR TCA 72 bp | CAAAGCATCCAAGAGAAACCTTTTCTCTGTATAAGCTaGTTGTCCCTGACACTTTGTTACAGTAGTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSIQEKPFLCIS*LSLTLCYSSEK Trigger: CTTTTCACTACTGTAACAAAGTGTCAGGGACAATCAGCTTATACAGAGAAAAGGTTTCTCTTGGATGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR TCA 72 bp | TTTCTCTTTCCATCCTTTATGACGTGTATAGCTTTATaGAGTTTGCTCTGTCACATTCTCCTATCATGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLFPSFMTCIAL*SLLCHILLSCL Trigger: AAGGCATGATAGGAGAATGTGACAGAGCAAACTTCATAAAGCTATACACGTCATAAAGGATGGAAAGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGAACTAGCCCTGGAGACATCCTCCAGTTaGGGGATGTTGTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAAVPPQAGLQGKQELALETSSS*GMLSSR Trigger: TCGGGAAGACAACATCCCGCAACTGGAGGATGTCTC...CAGGGCTAGTTCTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGGCCAAGAGAGGAACGTaGCCTAGGAGTTCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWELLSLPKQVFRGSKAKRGT*PRSSWQ Trigger: CTGCCATGAACTCCTAGGCCACGTTCCTCTCTTGGC...CTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | GACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGGCCAAGAGAGGAACGTaGCCTAGGAGTTCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DIAKLGAAVPPQAGLQGKAKRGT*PRSSWQ Trigger: CTGCCATGAACTCCTAGGCCACGTTCCTCTCTTGGC...CTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGAAAATCTCTCGGTaGGAGGTAACCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EARDIAKLGAAVPPQAGLQKISR*EVTSHR Trigger: CCTGTGGCTGGTTACCTCTCACCGAGAGATTTTCTG...AAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAGAAAATCTCTCGGTaGGAGGTAACCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DIAKLGAAVPPQAGLQGKQKISR*EVTSHR Trigger: CCTGTGGCTGGTTACCTCTCACCGAGAGATTTTCTG...CTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | GAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGACAGCCACAGGACGGATaGAAAACCCAGTGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLLSWELLSLPKQVFRGQPQDG*KTQCVL Trigger: AAGAACGCACTGGGTTTTCCATCCGTCCTGTGGCTG...TCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTGCTGTCCATCTTGTTTaGACAGCCCAAACTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EARDIAKLGAAVPPQAGLAVHLV*TAQTPQ Trigger: CTGTGGAGTTTGGGCTGTGCAAACAAGATGGACAGC...AAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | GACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGGCTGTCCATCTTGTTTaGACAGCCCAAACTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DIAKLGAAVPPQAGLQGKAVHLV*TAQTPQ Trigger: CTGTGGAGTTTGGGCTGTGCAAACAAGATGGACAGC...CTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGTGTAGAGGGGATCTaGACTGTGTCTCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLLSWELLSLPKQVFRGSVEGI*TVSHIL Trigger: CAGTATGTGAGACACAGTTCAGATCCCCTCTACACT...TCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAACAGCCACAGGACGGATaGAAAACCCAGTGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWREARDIAKLGAAVPPQQPQDG*KTQCVL Trigger: AAGAACGCACTGGGTTTTCCATCCGTCCTGTGGCTG...TTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGTTCATGGCAGGTGTCTaGCTCTGGAGTGTAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVLGITWHVNYISLSRFQFMAGV*LWSVEG Trigger: CCCCTCTACACTCCAGAGCCAGACACCTGCCATGAA...CTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCTCCCTCTCTCTTTCCCGCCCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPFVCVCVCVCPPPSLFPAQTPQ*KSSTLP Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGGC...GGGAAAGAGAGAGGGAGGAGGACACACACACACACACACACACACAAAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTCGAGGAATGGCTCTCCAGGAAAGAATTGCAAGCCTTGCTTTTTGTTGCAAAGGGAGGTTTCTaGGGTACTCCCTGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAVEEWLSRKELQALLFVAKGGF*GTPCRR Trigger: ACGCCTGCAGGGAGTACCTCAGAAACCTCCCTTTGC...AACAAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | GGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAAGCAAAGGGAGGTTTCTaGGGTACTCCCTGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GITWHVNYISLSRFQKTKAKGGF*GTPCRR Trigger: ACGCCTGCAGGGAGTACCTCAGAAACCTCCCTTTGC...TTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGATAGCCACAGTATTTTaGGAGCAAAGGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DIAKLGAAVPPQAGLQGKIATVF*EQREVS Trigger: AGAAACCTCCCTTTGCTCTCAAAATACTGTGGCTAT...CTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | GAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGAATTGAGCAAAACTaGGTTCAGCCAAGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLLSWELLSLPKQVFRGRIEQN*VQPREE Trigger: TTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCT...TCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGGCGCTTCACGGTCTTaGCAAATTCTCTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWREARDIAKLGAAVPPQGASRS*QILSSS Trigger: AGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCC...TTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTTTTTCAGCACTTTTATaGGTCCTCCGACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EARDIAKLGAAVPPQAGLFSALL*VLRLHS Trigger: AGAATGAAGTCGGAGGACTCATAAAAGTGCTGAAAA...AAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGGCAAAGGGAGGTTTCTaGGGTACTCCCTGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGNLGIKGLDFGMSRKAKGGF*GTPCRR Trigger: ACGCCTGCAGGGAGTACCTCAGAAACCTCCCTTTGC...CTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTGAAAAAGTAGCACGTTaGCAGTTTTTGAACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EARDIAKLGAAVPPQAGLEKVAR*QFLNCL Trigger: GAGACAGTTCAAAAACTGGCAACGTGCTACTTTTTC...AAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGGCCCCCAGCCACAGGACGGATaGAAAACCCAGTGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSRKCMFEFTDGRKQAGPQPQDG*KTQCVL Trigger: AAGAACGCACTGGGTTTTCCATCCGTCCTGTGGCTG...GGGGCCGGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR CCA 90 bp | CCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTTGGCCCTTCTCCATTTTCATGGCAGGTGTCTaGCTCTGGAGTGTAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRISTVSDTNCSLWPFSIFMAGV*LWSVEG Trigger: CCCCTCTACACTCCAGAGCCAGACACCTGCCATGAA...AATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CAA 72 bp | AGCTCCAAGGGAAGCCAGGCCAATTTCTTGGGAGAATaGAGCAAAACTGGGTTCAGCCAAGAGAGGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKGSQANFLGE*SKTGFSQERNV Trigger: CACGTTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGGCTTCCCTTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | GGGCGCTTCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGCAGAAAATCTCTCGGTaGGAGGTAACCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRFTVLANSLIFSFASSKQKISR*EVTSHR Trigger: CCTGTGGCTGGTTACCTCTCACCGAGAGATTTTCTG...CTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR GCA 90 bp | GACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGGTTCATAGCCAACTCTaGAAAATACTTTCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DIAKLGAAVPPQAGLQGKVHSQL*KILSSS Trigger: AGAAGACGAAAGTATTTTGCAGAGTTGGCTATGAAC...CTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAAGTCAAGCACGCTGCTGCTGTCGAGGAATGGCTCTCCAGGAAAGAATGAGACATCCTCCAGTTaGGGGATGTTGTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FKKSSTLLLSRNGSPGKNETSSS*GMLSSR Trigger: TCGGGAAGACAACATCCCGCAACTGGAGGATGTCTC...ATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTTCAAAAAGTCAAGCACGCTGCTGCTGTCGAGGAATGGCTCTCCAGGAGTGTAGAGGGGATCTaGACTGTGTCTCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: CFLQKVKHAAAVEEWLSRSVEGI*TVSHIL Trigger: CAGTATGTGAGACACAGTTCAGATCCCCTCTACACT...CCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAAGAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTCCAGGAAAGAATTGCAAGCCTTGCTTTTTGTTTGAATCTGGCCTGGGTGTCTCTGAGAACCTaGACACTCTGTGTGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: MALQERIASLAFCLNLAWVSLRT*TLCVYG Trigger: CCCGTACACACAGAGTGTTCAGGTTCTCAGAGACAC...CCAGGCCAGATTCAAACAAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR GCA 90 bp | GCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGGAGACATCCTCCAGTTaGGGGATGTTGTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AILGSKGLTLACPESACLETSSS*GMLSSR Trigger: TCGGGAAGACAACATCCCGCAACTGGAGGATGTCTC...CAAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR GCA 90 bp | GGGCGCTTCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGGCTGTCCATCTTGTTTaGACAGCCCAAACTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRFTVLANSLIFSFASSKAVHLV*TAQTPQ Trigger: CTGTGGAGTTTGGGCTGTGCAAACAAGATGGACAGC...CTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGGTCAGAAATCTTCTTTaGAAACCAAGGGACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLGITWHVNYISLSRFQVRNLL*KPRDSL Trigger: GAGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGAC...CTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGATTCAATCTTGGGAATaGGGTCCCCATGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVLGITWHVNYISLSRFQIQSWE*GPHVCS Trigger: ACTACAAACATGGGGACCCCATTCCCAAGATTGAAT...CTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | CATCCACTAATGATGGGCTGGGGAAAATGGCATCACCATGAGTCCAGCTCTGGCAGAATTGAGCAAAACTaGGTTCAGCCAAGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPLMMGWGKWHHHESSSGRIEQN*VQPREE Trigger: TTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCT...GCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CAA 72 bp | ATGGGTGTTTTTGCTGCATGCATATCTGTGTACCACTaGCATGCCTGCCTGCTCTCTATGGAGGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MGVFAACISVYH*HACLLSMEARK Trigger: TTTTCTGGCCTCCATAGAGAGCAGGCAGGCATGCAAGTGGTACACAGATATGCATGCAGCAAAAACACCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| 3UTR CAA 72 bp | GGGTTGTACTTCAGTCCAAACGGGCGCTTCACGGTCTaGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLYFSPNGRFTV*ANSLIFSFASS Trigger: TGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCCGTTTGGACTGAAGTACAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | CATCCACTAATGATGGGCTGGGGAAAATGGCATCACCATGAGTCCAGCTCTGGCTTTTCAGCACTTTTATaGGTCCTCCGACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLMMGWGKWHHHESSSGFSALL*VLRLHS Trigger: AGAATGAAGTCGGAGGACTCATAAAAGTGCTGAAAA...GCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCATCATTAGTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | TGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTCAGAAAATCTCTCGGTaGGAGGTAACCAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLQAILGSKGLTLACPESQKISR*EVTSHR Trigger: CCTGTGGCTGGTTACCTCTCACCGAGAGATTTTCTG...ACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTTCAAAAAGTCAAGCACGCTGCTGCTGTCGAGGAATGGCTCTCCAGGATTTCTTGGGAGAATTaGGCAAAACTGGGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLQKVKHAAAVEEWLSRISWEN*AKLGSA Trigger: GGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAAT...CCTGGAGAGCCATTCCTCGACAGCAGCAGCGTGCTTGACTTTTTGAAGAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGGCCCAAACTCCACAGTaGAAAAGTAGCACGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITWHVNYISLSRFQKTKQAQTPQ*KSSTLP Trigger: TGGCAACGTGCTACTTTTTCACTGTGGAGTTTGGGC...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | TCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTCAAAGCTCTCAGGCCCAAACTCCACAGTaGAAAAGTAGCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSWQILSSSPLHLQSSQAQTPQ*KSSRLW Trigger: CCAGAGCCTGCTACTTTTTCACTGTGGAGTTTGGGC...CTGAGAGCTTTGAAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCACCCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCTCCCTCTCTCAATTCTGAATTTCTTTaGTTTGATTTCCGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLTPFVCVCVCVCPPPSLNSEFL*FDFRDS Trigger: CGAGTCCCGGAAATCAAAGCAAAGAAATTCAGAATT...GAGAGAGGGAGGAGGACACACACACACACACACACACACAAAGGGGGTGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR GCA 90 bp | GTGATTGAATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIEYGERRETLLSWELLSGMSRK*MFEFTD Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...GGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATATTCAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTCAGCCACAGGACGGATaGAAAACCCAGTGCGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSKGLTLACPESACLSQPQDG*KTQCVC Trigger: ACAAACGCACTGGGTTTTCCATCCGTCCTGTGGCTG...ACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAGTGTAGAGGGGATCTaGACTGTGTCTCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFTGNLGIKGLDFGMSRSVEGI*TVSHIL Trigger: CAGTATGTGAGACACAGTTCAGATCCCCTCTACACT...TCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CCA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGGGCGCTTCACGGTCTTaGCAAATTCTCTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITWHVNYISLSRFQKTKQGASRS*QILSSS Trigger: AGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCC...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTCGAGGAATGGCTCTCCAGGAAAGAATTGCAAGCCTTGCTTTTTGTTATAGCCACAGTATTTTaGGAGCAAAGGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAVEEWLSRKELQALLFVIATVF*EQREVS Trigger: AGAAACCTCCCTTTGCTCTCAAAATACTGTGGCTAT...AACAAAAAGCAAGGCTTGCAATTCTTTCCTGGAGAGCCATTCCTCGACAGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | TTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCAGTGTAGAGGGGATCTaGACTGTGTCTCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: FGMSRKCMFEFTDGRKQASVEGI*TVSHIL Trigger: CAGTATGTGAGACACAGTTCAGATCCCCTCTACACT...GGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | CTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGGTGTCTCTGAGAACCTaGACACTCTGTGTGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFPQQVPEDKTEVEDKQVSLRT*TLCVYG Trigger: CCCGTACACACAGAGTGTTCAGGTTCTCAGAGACAC...CTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | CCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTTGGCCCTTCTCCATTGTCAGAAATCTTCTTTaGAAACCAAGGGACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRISTVSDTNCSLWPFSIVRNLL*KPRDSL Trigger: GAGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGAC...AATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR CCA 90 bp | GAGGGCATCACTGATGACATCAAGGTCATACCGCAACTCATTCATGGCACTAGTGTCAGAAATCTTCTTTaGAAACCAAGGGACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGITDDIKVIPQLIHGTSVRNLL*KPRDSL Trigger: GAGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGAC...ACTAGTGCCATGAATGAGTTGCGGTATGACCTTGATGTCATCAGTGATGCCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGGCCCCGTTCTTTTAAAAAGTTaGAGACATCCTCCAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MSRKCMFEFTDGRKQAGPVLLKS*RHPPVA Trigger: CGCAACTGGAGGATGTCTCCAACTTTTTAAAAGAAC...GGGGCCGGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAATTTCTTGGGAGAATTGAGCAAAACTGGGTTCAGCCAAGAGAGGAATTTTCAGCACTTTTATaGGTCCTCCGACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGQFLGRIEQNWVQPREEFSALL*VLRLHS Trigger: AGAATGAAGTCGGAGGACTCATAAAAGTGCTGAAAA...TTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAATAGCCACAGTATTTTaGGAGCAAAGGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLQAILGSKGLTLACPEIATVF*EQREVS Trigger: AGAAACCTCCCTTTGCTCTCAAAATACTGTGGCTAT...TTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGTGCATTTGGGATCAAAGGGCTTaGCTTTGGCATGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVPEDKTEVEDKQFQVCIWDQRA*LWHVQK Trigger: TTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCA...AATGCACACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGGGCATGTCCAGAAAGTaGATGTTTGAGTTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITWHVNYISLSRFQKTKQGMSRK*MFEFTD Trigger: ATCAGTGAACTCAAACATGCACTTTCTGGACATGCC...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| 3UTR CAA 72 bp | ATGTTCATACTTTGTCTAACCCCCAAGGCTGATTCTTaGTACCAACCATCATCACTGCTAGGGTCTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MFILCLTPKADS*YQPSSLLGSLN Trigger: GTTCAGAGACCCTAGCAGTGATGATGGTTGGTACAAAGAATCAGCCTTGGGGGTTAGACAAAGTATGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR TCA 90 bp | CTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTGGGATCAAAGGGCTTaGCTTTGGCATGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFPQQVPEDKTEVEDKQWDQRA*LWHVQK Trigger: TTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCA...CTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGGCCCCAAAGACTAATTCTGAATTTCTTTaGTTTGATTTCCGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ESACLSSLMEESKPAPKTNSEFL*FDFRDS Trigger: CGAGTCCCGGAAATCAAAGCAAAGAAATTCAGAATT...AGTCTTTGGGGCCGGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGTCAGAAATCTTCTTTaGAAACCAAGGGACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGMSRKCMFEFTDGRKQAVRNLL*KPRDSL Trigger: GAGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGAC...GGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGGTTCTTTTAAAAAGTTaGAGACATCCTCCAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPEDKTEVEDKQFQVVLLKS*RHPPVA Trigger: CGCAACTGGAGGATGTCTCCAACTTTTTAAAAGAAC...CACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAATTCTGAATTTCTTTaGTTTGATTTCCGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ITWHVNYISLSRFQKTKQNSEFL*FDFRDS Trigger: CGAGTCCCGGAAATCAAAGCAAAGAAATTCAGAATT...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAATTCTGAATTTCTTTaGTTTGATTTCCGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLFTGNLGIKGLDFGMSRNSEFL*FDFRDS Trigger: CGAGTCCCGGAAATCAAAGCAAAGAAATTCAGAATT...TCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | CTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGTTTTCAGCACTTTTATaGGTCCTCCGACTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDFGMSRKCMFEFTDGRKFSALL*VLRLHS Trigger: AGAATGAAGTCGGAGGACTCATAAAAGTGCTGAAAA...CTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR TCA 90 bp | GAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGATTTCTTGGGAGAATTaGGCAAAACTGGGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELYFPQQVPEDKTEVEDKISWEN*AKLGSA Trigger: GGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAAT...CTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGTGCATTGTTCTTTTAAAAAGTTaGAGACATCCTCCAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QVPEDKTEVEDKQFQVCIVLLKS*RHPPVA Trigger: CGCAACTGGAGGATGTCTCCAACTTTTTAAAAGAAC...AATGCACACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR TCA 90 bp | ATTAATGGGAAAAGCAGAGGTAGGGTCTTCTACTTTTTATTGTATGTGTATGGGTCAACTGTTCTCGGCTaGTGTCGCAGTCAACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: INGKSRGRVFYFLLYVYGSTVLG*CRSQQI Trigger: TATTTGTTGACTGCGACATCAGCCGAGAACAGTTGA...CCCATACACATACAATAAAAAGTAGAAGACCCTACCTCTGCTTTTCCCATTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR GCA 90 bp | GAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGGAAAAAGTAGCACGTTaGCAGTTTTTGAACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELYFPQQVPEDKTEVEDKEKVAR*QFLNCL Trigger: GAGACAGTTCAAAAACTGGCAACGTGCTACTTTTTC...CTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGAACTAGCCCTGTCGGAGGAATGGTCTTaGTTCTCTTTGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAAVPPQAGLQGKQELALSEEWS*FSLFSL Trigger: CAAGGAGAACAAAGAGAACAAAGACCATTCCTCCGA...CAGGGCTAGTTCTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGAACTAGCCCTGGATAGCCACAGTATTTaGAGAGCAAAGGGAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAAVPPQAGLQGKQELALDSHSI*RAKGGF Trigger: GAAACCTCCCTTTGCTCTCAAAATACTGTGGCTATC...CAGGGCTAGTTCTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCTCCCTCTCTCTTTCCCGGGCGCTTCACGGTCTaGGCAAATTCTCTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPFVCVCVCVCPPPSLFPGRFTV*ANSLIF Trigger: GAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCC...GGGAAAGAGAGAGGGAGGAGGACACACACACACACACACACACACAAAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR CAA 90 bp | TTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGGGTCAGAAATCTTCTTaGGAAACCAAGGGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSWELLSLPKQVFRGSKGQKSS*ETKGQS Trigger: AGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGACC...CTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCCCAGCTTAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGCTGGGGAAAATGGCATCACCATGAGTCCAGCTCTGGCCAGTGTCAGACATCCGTGAATTCAATCTaGGGAATGGGGTCCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: MGWGKWHHHESSSGQCQTSVNSI*GMGSPC Trigger: ACATGGGGACCCCATTCCCAAGATTGAATTCACGGA...TGTCTGACACTGGCCAGAGCTGGACTCATGGTGATGCCATTTTCCCCAGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAATCCGTGAATTCAATCTaGGGAATGGGGTCCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: IWREARDIAKLGAAVPPQSVNSI*GMGSPC Trigger: ACATGGGGACCCCATTCCCAAGATTGAATTCACGGA...TTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGCTGTCCCTCCCCAAGCAGGTCTTCAGGGGAAGCAAGAACTAGCCCTGAATTTCTTGGGAGAATaGAGCAAAACTGGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAAVPPQAGLQGKQELALNFLGE*SKTGFS Trigger: GCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATT...CAGGGCTAGTTCTTGCTTCCCCTGAAGACCTGCTTGGGGAGGGACAGCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS CCA 90 bp | CAGGGTGGTCGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTTaGCGCAGAAGTCCAGGTCAGAAATCTTCTTTGGAAACCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGGRRQVRIHTTALC*RRSPGQKSSLETKG Trigger: TCCCTTGGTTTCCAAAGAAGATTTCTGACCTGGACTTCTGCGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCGACCACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 ENSMUST00000168335.3 ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGTCTCAGCTGTCCATCTaGTTTGCACAGCCCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: CVLGITWHVNYISLSRFQSQLSI*FAQPKL Trigger: GAGTTTGGGCTGTGCAAACAAGATGGACAGCTGAGA...CTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCCGGCCCCAAAGACTCTCAGCTGTCCATCTTGTTTGCACAGCCCAAACTCGGTCAGAAATCTTCTTaGGAAACCAAGGGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAGPKDSQLSILFAQPKLGQKSS*ETKGQS Trigger: AGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGACC...GAGTTTGGGCTGTGCAAACAAGATGGACAGCTGAGAGTCTTTGGGGCCGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172386.8 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAGATAGCCACAGTATTTaGAGAGCAAAGGGAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IWREARDIAKLGAAVPPQDSHSI*RAKGGF Trigger: GAAACCTCCCTTTGCTCTCAAAATACTGTGGCTATC...TTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGGGAGACATCCTCCAGTaGCGGGATGTTGTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ITWHVNYISLSRFQKTKQGDILQ*RDVVFP Trigger: CGGGAAGACAACATCCCGCAACTGGAGGATGTCTCC...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGGAGACATCCTCCAGTaGCGGGATGTTGTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GNLGIKGLDFGMSRKCMFGDILQ*RDVVFP Trigger: CGGGAAGACAACATCCCGCAACTGGAGGATGTCTCC...AAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGAGAGGCGAGAGACATTGCTAAGCTGGGAGCTGCTGTCCCTCCCCAAAGCCAGGCCAATTTCTaGGGAGAATTGAGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: IWREARDIAKLGAAVPPQSQANF*GELSKT Trigger: AGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGGCT...TTGGGGAGGGACAGCAGCTCCCAGCTTAGCAATGTCTCTCGCCTCTCTCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCCTGGGCATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGGTCAGAAATCTTCTTaGGAAACCAAGGGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCPGHHVARELYFPQQVPGQKSS*ETKGQS Trigger: AGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGACC...TGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGATGCCCAGGACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGTGCATTGGAGACATCCTCCAGTaGCGGGATGTTGTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QVPEDKTEVEDKQFQVCIGDILQ*RDVVFP Trigger: CGGGAAGACAACATCCCGCAACTGGAGGATGTCTCC...AATGCACACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS CCA 90 bp | CTTAAGTTATTCGCACTGCGTGACTTTGTAAACATATTTACAGGGTaGTCGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LKLFALRDFVNIFTG*SASSSDPYNSTLLA Trigger: CGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCGACCACCCTGTAAATATGTTTACAAAGTCACGCAGTGCGAATAACTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168335.3 |
||
| CDS-3UTR CAA 90 bp | CAAACGGGCGCTTCACGGTCTTGGCAAATTCTCTCATCTTCTCCTTTGCATCTTTCGGAGGAATGGTCTTaGTTCTCTTTGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTGASRSWQILSSSPLHLSEEWS*FSLFSL Trigger: CAAGGAGAACAAAGAGAACAAAGACCATTCCTCCGA...AAGATGCAAAGGAGAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCCGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAATCCGTGAATTCAATCTaGGGAATGGGGTCCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLTLACPESACLSSLMESVNSI*GMGSPC Trigger: ACATGGGGACCCCATTCCCAAGATTGAATTCACGGA...TTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGTTGGGATCAAAGGGCTaGACTTTGGCATGTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PQQVPEDKTEVEDKQFQVLGSKG*TLACPE Trigger: TTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAA...CACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTTCCAGGTGTCGGAGGAATGGTCTTaGTTCTCTTTGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQQVPEDKTEVEDKQFQVSEEWS*FSLFSL Trigger: CAAGGAGAACAAAGAGAACAAAGACCATTCCTCCGA...CACCTGGAACTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACAGGCAATCTTGGGATCAAAGGGCTTGACTTTGGCATGTCCAGAAAGTCGGAGGAATGGTCTTaGTTCTCTTTGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFTGNLGIKGLDFGMSRKSEEWS*FSLFSL Trigger: CAAGGAGAACAAAGAGAACAAAGACCATTCCTCCGA...CTTTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGCAAGCCGGGTCAGAAATCTTCTTaGGAAACCAAGGGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LACPESACLSSLMEESKPGQKSS*ETKGQS Trigger: AGACTGTCCCTTGGTTTCCAAAGAAGATTTCTGACC...CGGCTTGCTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS-3UTR CAA 90 bp | CCTCGCATAAGTACAGTCTCAGATACAAACTGCTCCCTTTGGCCCTTCTCCATTAATTTCTTGGGAGAATaGAGCAAAACTGGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRISTVSDTNCSLWPFSINFLGE*SKTGFS Trigger: GCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATT...AATGGAGAAGGGCCAAAGGGAGCAGTTTGTATCTGAGACTGTACTTATGCGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR CAA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGTGTTTACAGGCAATCTaGGGATCAAAGGGCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: ITWHVNYISLSRFQKTKQCLQAI*GSKGLT Trigger: AGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACA...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGGGGCGCTTCACGGTCTaGGCAAATTCTCTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYFPQQVPEDKTEVEDKQGRFTV*ANSLIF Trigger: GAAGATGAGAGAATTTGCCAAGACCGTGAAGCGCCC...CTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | ATCACGTGGCACGTGAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGCTGAATTTCTTTGCTTaGATTTCCGGGACTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ITWHVNYISLSRFQKTKQLNFFA*ISGTRC Trigger: ACATCGAGTCCCGGAAATCAAAGCAAAGAAATTCAG...CTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTCACGTGCCACGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | AAACTGAACTGTAGGATCTTTCTGTCTCTGTCTCTGTCTCTGACTCTCTCTCTCAGCCAGGCCAATTTCTaGGGAGAATTGAGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KLNCRIFLSLSLSLTLSLSQANF*GELSKT Trigger: AGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGGCT...GAGAGAGAGAGTCAGAGACAGAGACAGAGACAGAAAGATCCTACAGTTCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049298.15 |
||
| CDS-3UTR CAA 90 bp | CTTGACTTTGGCATGTCCAGAAAGTGCATGTTTGAGTTCACTGATGGAAGAAAGGATAGCCACAGTATTTaGAGAGCAAAGGGAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDFGMSRKCMFEFTDGRKDSHSI*RAKGGF Trigger: GAAACCTCCCTTTGCTCTCAAAATACTGTGGCTATC...CTTTCTTCCATCAGTGAACTCAAACATGCACTTTCTGGACATGCCAAAGTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170251.8 |
||
| CDS-3UTR CAA 90 bp | GAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGTCTCAGCTGTCCATCTaGTTTGCACAGCCCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ELYFPQQVPEDKTEVEDKSQLSI*FAQPKL Trigger: GAGTTTGGGCTGTGCAAACAAGATGGACAGCTGAGA...CTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | GAACTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGTTGGGATCAAAGGGCTaGACTTTGGCATGTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELYFPQQVPEDKTEVEDKLGSKG*TLACPE Trigger: TTCTGGACATGCCAAAGTCAAGCCCTTTGATCCCAA...CTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS-3UTR CAA 90 bp | CTATATTTCCCTCAGCAGGTTCCAGAAGACAAAACAGAAGTAGAAGATAAGCAGTGTTTACAGGCAATCTaGGGATCAAAGGGCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LYFPQQVPEDKTEVEDKQCLQAI*GSKGLT Trigger: AGTCAAGCCCTTTGATCCCAAGATTGCCTGTAAACA...CTGCTTATCTTCTACTTCTGTTTTGTCTTCTGGAACCTGCTGAGGGAAATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS CAA 90 bp | CCAGGGTGGTCGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTaGGCGCAGAAGTCCAGGTCAGAAATCTTCTTTGGAAACCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGWSASSSDPYNSTL*AQKSRSEIFFGNQG Trigger: CCCTTGGTTTCCAAAGAAGATTTCTGACCTGGACTTCTGCGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCGACCACCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS CAA 90 bp | ACAGGGTGGTCGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTaGGCGCAGAAGTCCAGGTCAGAAATCTTCTTTGGAAACCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGWSASSSDPYNSTL*AQKSRSEIFFGNQG Trigger: CCCTTGGTTTCCAAAGAAGATTTCTGACCTGGACTTCTGCGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCGACCACCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168335.3 |
||
| CDS TCA 72 bp | ATGGCAGGTGTCTGGCTCTGGAGTGTAGAGGGGATCTaGACTGTGTCTCACATACTGAGTGCAGTGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: MAGVWLWSVEGI*TVSHILSAVKD Trigger: GTCTTTCACTGCACTCAGTATGTGAGACACAGTTCAGATCCCCTCTACACTCCAGAGCCAGACACCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 ENSMUST00000172386.8 |
||
| CDS CCA 72 bp | CGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTTaGCGCAGAAGTCCAGGTCAGAAATCTTCTTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRQVRIHTTALC*RRSPGQKSSLE Trigger: TTCCAAAGAAGATTTCTGACCTGGACTTCTGCGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 ENSMUST00000168335.3 ENSMUST00000170251.8 ENSMUST00000172386.8 |
||
| CDS CCA 72 bp | AAGCCAGGCCAATTTCTTGGGAGAATTGAGCAAAACTaGGTTCAGCCAAGAGAGGAACGTGGCCTAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KPGQFLGRIEQN*VQPREERGLGV Trigger: AACTCCTAGGCCACGTTCCTCTCTTGGCTGAACCCAGTTTTGCTCAATTCTCCCAAGAAATTGGCCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 |
||
| CDS CAA 72 bp | TCGGCGTCAAGTTCGGATCCATACAACAGCACTCTGTaGGCGCAGAAGTCCAGGTCAGAAATCTTCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SASSSDPYNSTL*AQKSRSEIFFG Trigger: TCCAAAGAAGATTTCTGACCTGGACTTCTGCGCCAACAGAGTGCTGTTGTATGGATCCGAACTTGACGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049298.15 ENSMUST00000107669.9 ENSMUST00000168335.3 ENSMUST00000170251.8 ENSMUST00000172386.8 |
||