Pregenerated sensors for TPGS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024269Ensembl transcript IDs: ENSMUST00000115817.3, ENSMUST00000148255.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGGAGCTGCCAGAGACTAAGCCACCAACCAAAGAGTATACTTaGGCTGAGCTGAGGCCCCTGGAACATATGTATCAGAGGACTGCC | + |
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Preference number: 1 (lower is better) Translates to: PWELPETKPPTKEYT*AELRPLEHMYQRTA Trigger: GGCAGTCCTCTGATACATATGTTCCAGGGGCCTCAGCTCAGCTCAAGTATACTCTTTGGTTGGTGGCTTAGTCTCTGGCAGCTCCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 90 bp | TGTAGGGACAAAAATGGAGCAGAGACTGAAAGAAAGGCCATCCAGTaGCTGGCCCAACTTGGGATCTATCCCATGGGAGGGCACCAAATC | + |
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Preference number: 1 (lower is better) Translates to: CRDKNGAETERKAIQ*LAQLGIYPMGGHQI Trigger: GATTTGGTGCCCTCCCATGGGATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCTTTCTTTCAGTCTCTGCTCCATTTTTGTCCCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 90 bp | TTGTCACAACCTACAGAGGAAGGAACTCCTGAGGAGAATTCAGTGTaGTCGTCCCAGCCCCTAGCTAATGACAGTGGAAACAAAGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: LSQPTEEGTPEENSV*SSQPLANDSGNKGL Trigger: TAGGCCTTTGTTTCCACTGTCATTAGCTAGGGGCTGGGACGATCACACTGAATTCTCCTCAGGAGTTCCTTCCTCTGTAGGTTGTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 90 bp | GAAGCAGGGACAGACTCTATAGGAGCCTCCCAAGTCCTGGCCCAGTaGCAACTAGATTTTGGCTCTATAAAACTGACATTGAACTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: EAGTDSIGASQVLAQ*QLDFGSIKLTLNFW Trigger: CCAGAAGTTCAATGTCAGTTTTATAGAGCCAAAATCTAGTTGTCACTGGGCCAGGACTTGGGAGGCTCCTATAGAGTCTGTCCCTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 90 bp | TGGAGAAAGAGAAGACGAAGTGAAAGCAACAGGACTGAAGTGATATaGACCCAAACAACAATCTGCAGGAGGAAGCAGGGACAGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: WRKRRRSESNRTEVI*TQTTICRRKQGQTL Trigger: TAGAGTCTGTCCCTGCTTCCTCCTGCAGATTGTTGTTTGGGTTCATATCACTTCAGTCCTGTTGCTTTCACTTCGTCTTCTCTTTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 90 bp | CCTTTCTGTGCTGTCCAATATGGACTCTACCATCAGGTGCATAGCTaGAGTGTGGTGAATGCAACTGAAGGTGTGCAATTTTCATTAACT | + |
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Preference number: 1 (lower is better) Translates to: PFCAVQYGLYHQVHS*SVVNATEGVQFSLT Trigger: AGTTAATGAAAATTGCACACCTTCAGTTGCATTCACCACACTTCAGCTATGCACCTGATGGTAGAGTCCATATTGGACAGCACAGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR GCA 90 bp | TGCATGAGAGGCCATGGCAGTCTTTCTCCAATGTCTGCATGGAGGTaGAGAGGTTCTAAGAGCATGTATATAAGCAGAAAGAATGATTAT | + |
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Preference number: 1 (lower is better) Translates to: CMRGHGSLSPMSAWR*RGSKSMYISRKNDY Trigger: ATAATCATTCTTTCTGCTTATATACATGCTCTTAGAACCTCTGCACCTCCATGCAGACATTGGAGAAAGACTGCCATGGCCTCTCATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 90 bp | GATGAGCAGGGGTACAAACGGCAGCTTAGTTTCCCAGCTCTAAAGTaGCTTATAGATCCGTTATGGCCTTCAAAACAATCATTTATATCC | + |
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Preference number: 1 (lower is better) Translates to: DEQGYKRQLSFPALK*LIDPLWPSKQSFIS Trigger: GGATATAAATGATTGTTTTGAAGGCCATAACGGATCTATAAGCCACTTTAGAGCTGGGAAACTAAGCTGCCGTTTGTACCCCTGCTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR CCA 90 bp | GAGTTACTTTTTGGTCTTTTAGAGCCTTATCAAGACAGTTATTGGTaGGATATCCAGTTAGGTAGTATCTGGGTACAACATAGTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ELLFGLLEPYQDSYW*DIQLGSIWVQHSFW Trigger: CCAGAAACTATGTTGTACCCAGATACTACCTAACTGGATATCCCACCAATAACTGTCTTGATAAGGCTCTAAAAGACCAAAAAGTAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 90 bp | ATGGCCTTCAAAACAATCATTTATATCCACAGTCCCTTGAAATGGTaGAGTAGCAAACACTACTGTAATACATTGACTCAACATCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: MAFKTIIYIHSPLKW*SSKHYCNTLTQHLW Trigger: CCAGAGATGTTGAGTCAATGTATTACAGTAGTGTTTGCTACTTCACCATTTCAAGGGACTGTGGATATAAATGATTGTTTTGAAGGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 90 bp | CATTTCTGTCCAGTGTTCTCAAAGTATATCAGGAGCAAATGGAATTaGTGGAGTTGTGTGTGGGTTGGTAAGGATAGTTTAGATTTCATA | + |
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Preference number: 1 (lower is better) Translates to: HFCPVFSKYIRSKWN*WSCVWVGKDSLDFI Trigger: TATGAAATCTAAACTATCCTTACCAACCCACACACAACTCCATCAATTCCATTTGCTCCTGATATACTTTGAGAACACTGGACAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 90 bp | AAATCCAATCATAAGTGTCCTTATAAAGGACAGTCAGAAGAGATTTaGAGAAAGAGAAGACGAAGTGAAAGCAACAGGACTGAAGTGATA | + |
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Preference number: 1 (lower is better) Translates to: KSNHKCPYKGQSEEI*RKRRRSESNRTEVI Trigger: TATCACTTCAGTCCTGTTGCTTTCACTTCGTCTTCTCTTTCTCCAAATCTCTTCTGACTGTCCTTTATAAGGACACTTATGATTGGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR GCA 90 bp | ACACACATACACACATGCATAAACACACTCACACATACACATGTATaGTTGTGCACACATGCCCATAAAAATCATAGTTTACTAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: THIHTCINTLTHTHV*LCTHAHKNHSLLNN Trigger: ATTGTTTAGTAAACTATGATTTTTATGGGCATGTGTGCACAAGCATACATGTGTATGTGTGAGTGTGTTTATGCATGTGTGTATGTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAAGGCCATCCAGTGACTGGCCCAACTTGGGATCTATCCCATGGGAGGGCTATGTATCAGAGGACTaGCTTGTCTGGCTTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KERPSSDWPNLGSIPWEGYVSED*LVWLQG Trigger: CCCCTGAAGCCAGACAAGGCAGTCCTCTGATACATA...GCCCTCCCATGGGATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCTTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGACAGGTATAAAGGCACAAGTGAGAACCCAACTGGTGTCTTGCAAGCAAGCAGCCACAACTCCATaGGTTCCAGGACAGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ERTGIKAQVRTQLVSCKQAATTP*VPGQPG Trigger: TCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGC...TTGCTTGCAAGACACCAGTTGGGTTCTCACTTGTGCCTTTATACCTGTCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGACACCTATGGAAGAGTTAGGAGAAGGATTGACGGAGCTGAAGGGGATGGCTTACCTCCCTCAGATTaGGCAGGGTGGCATTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QDTYGRVRRRIDGAEGDGLPPSD*AGWHFF Trigger: AAAGAAATGCCACCCTGCTCAATCTGAGGGAGGTAA...GCCATCCCCTTCAGCTCCGTCAATCCTTCTCCTAACTCTTCCATAGGTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGCCTACCATTGGACTGAGGTCAGGACACCTATGGAAGAGTTAGGAGAAAGAGTATACTTGAGCTaGGCTGAGGCCCCTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LTAYHWTEVRTPMEELGERVYLS*AEAPGT Trigger: TGTTCCAGGGGCCTCAGCTCAGCTCAAGTATACTCT...TTCTCCTAACTCTTCCATAGGTGTCCTGACCTCAGTCCAATGGTAGGCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAACTTGGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGACAGGAGCCTAGCATaGCTGTCCTCTGAGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: GPTWDLSHGRAPNLDTITDRSLA*LSSERL Trigger: AAGTCTCTCAGAGGACAGCCATGCTAGGCTCCTGTC...AGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCCAAGTTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAACTTGGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTAATCCTGTAGAGACTTaGTGCCCCAGGAAAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPTWDLSHGRAPNLDTITNPVET*CPRKGR Trigger: TCTCCCTTTCCTGGGGCATCAAGTCTCTACAGGATT...AGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCCAAGTTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGATGCTATGTCTCACAGCCTACCATTaGACTGAGGTCAGGACACCT | + |
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Preference number: 2 (lower is better) Translates to: GIYPMGGHQILTLLLMLCLTAYH*TEVRTP Trigger: AGGTGTCCTGACCTCAGTCCAATGGTAGGCTGTGAG...ACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTAGGCCATCCAGTGACTaGCCCAACTTGGGATCTATC | + |
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Preference number: 2 (lower is better) Translates to: GKLISCCYGLECCIPPLCRPSSD*PNLGSI Trigger: GATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCT...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTATACTTGAGCTGAGCTaGGGCCCCTGGAACATATGT | + |
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Preference number: 2 (lower is better) Translates to: GKLISCCYGLECCIPPLCILELS*GPWNIC Trigger: ACATATGTTCCAGGGGCCTCAGCTCAGCTCAAGTAT...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAATCAGCTGGTGGAAAGGAATCAGACAACTGCTGCATGATACAGTTTTGCACCAAAGAGTATACTTaGGCTGAGCTGAGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FKSAGGKESDNCCMIQFCTKEYT*AELRPL Trigger: CAGGGGCCTCAGCTCAGCTCAAGTATACTCTTTGGT...GCAAAACTGTATCATGCAGCAGTTGTCTGATTCCTTTCCACCAGCTGATTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CAA 90 bp | ATCAGCTGGTGGAAAGGAATCAGACAACTGCTGCATGATACAGTTTaGCTGTTTGGTGGCTCTACTCTGAGGACAGCCATTAAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: ISWWKGIRQLLHDTV*LFGGSTLRTAIKKS Trigger: AGATTTCTTAATGGCTGTCCTCAGAGTAGAGCCACCAAACAGCAAAACTGTATCATGCAGCAGTTGTCTGATTCCTTTCCACCAGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTCTGTGCTGTCCAATATaGACTCTACCATCAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCLCCPI*TLPSGA Trigger: TGCACCTGATGGTAGAGTCCATATTGGACAGCACAG...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCTATGCACTAAGTCATTTAGCAGCCACAACTCCATGAGTTCCAGGACAGCCTTTGCAGATCAGAACTaGAATCCAATCATCTTATCC | + |
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Preference number: 2 (lower is better) Translates to: TLCTKSFSSHNSMSSRTAFADQN*NPIILS Trigger: GGATAAGATGATTGGATTCCAGTTCTGATCTGCAAA...GGCTGTCCTGGAACTCATGGAGTTGTGGCTGCTAAATGACTTAGTGCATAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCTGTGGGAGGCTGTCATCCAATTAAATTTCAGTTATCCCCCATTCTTTGCAGAAAAGACCAGTaGCATTCATGGCTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: TEAVGGCHPIKFQLSPILCRKDQ*HSWLHV Trigger: CACATGAAGCCATGAATGCCACTGGTCTTTTCTGCA...AAGAATGGGGGATAACTGAAATTTAATTGGATGACAGCCTCCCACAGCTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR CAA 90 bp | AGAACTGGAATCCAATCATCTTATCCCCACATGATACCAGTGACTTaGGTGCACAATTCTAAGTCTAGGGATCACACCTTTAAGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: RTGIQSSYPHMIPVT*VHNSKSRDHTFKHS Trigger: GGAATGCTTAAAGGTGTGATCCCTAGACTTAGAATTGTGCACCAAAGTCACTGGTATCATGTGGGGATAAGATGATTGGATTCCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGACAGGTATAAAGGCACAAGTGAGAACCCAACTGGTGTCTTGCAAGCAAGAAAACCCTGACACCTaGAATTTTTCTTGGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: ERTGIKAQVRTQLVSCKQENPDT*NFSWKF Trigger: GAATTTCCAAGAAAAATTCCAGGTGTCAGGGTTTTC...TTGCTTGCAAGACACCAGTTGGGTTCTCACTTGTGCCTTTATACCTGTCCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR TCA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTACACAGACCGTAAGATaGGTGAAAGATATCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCTQTVR*VKDIQT Trigger: AGTCTGGATATCTTTCACTCATCTTACGGTCTGTGT...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAAACTGAGATCTTAAGCTaGAAGTTTCAAACTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PAEIHTGKLMCIKPSGPETEILS*KFQTQK Trigger: CTTCTGAGTTTGAAACTTTCAGCTTAAGATCTCAGT...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR TCA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTCAGCATCAATGGTGTTaGAGAACTTTTCCTAGATAC | + |
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Preference number: 2 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCQHQWC*RTFPRY Trigger: GTATCTAGGAAAAGTTCTTCAACACCATTGATGCTG...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTTGGAAATTCTTATTTTaGAGATCAGAACTGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCWKFLF*RSELES Trigger: GGATTCCAGTTCTGATCTGCAAAATAAGAATTTCCA...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR CAA 90 bp | CACATACACACATGCATAAACACACTCACACATACACATGTATGCTaGTGCACACATGCCCATAAAAATCATAGTTTACTAAACAATGAT | + |
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Preference number: 2 (lower is better) Translates to: HIHTCINTLTHTHVC*CTHAHKNHSLLNND Trigger: ATCATTGTTTAGTAAACTATGATTTTTATGGGCATGTGTGCACAAGCATACATGTGTATGTGTGAGTGTGTTTATGCATGTGTGTATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 72 bp | ATGGAGCAGAGACTGAAAGAAAGGCCATCCAGTGACTaGCCCAACTTGGGATCTATCCCATGGGAGGGCACC | + |
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Preference number: 3 (lower is better) Translates to: MEQRLKERPSSD*PNLGSIPWEGT Trigger: GGTGCCCTCCCATGGGATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCTTTCTTTCAGTCTCTGCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CAA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTAGGAAAGGGAGATGCTaGGCGGGAGGGAGCACCCTC | + |
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Preference number: 3 (lower is better) Translates to: GKLISCCYGLECCIPPLCRKGRC*AGGSTL Trigger: GAGGGTGCTCCCTCCCGCCAAGCATCTCCCTTTCCT...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCCAACTTGGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGAGTTAGGAGAAGGATaGACGGAGCTGAAGGGGATG | + |
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Preference number: 3 (lower is better) Translates to: GPTWDLSHGRAPNLDTITELGEG*TELKGM Trigger: CATCCCCTTCAGCTCCGTCAATCCTTCTCCTAACTC...AGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCCAAGTTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 72 bp | CCTACAGAGGAAGGAACTCCTGAGGAGAATTCAGTGTaGTCGTCCCAGCCCCTAGCTAATGACAGTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: PTEEGTPEENSV*SSQPLANDSGN Trigger: GTTTCCACTGTCATTAGCTAGGGGCTGGGACGATCACACTGAATTCTCCTCAGGAGTTCCTTCCTCTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 72 bp | AAAAATGGAGCAGAGACTGAAAGAAAGGCCATCCAGTaGCTGGCCCAACTTGGGATCTATCCCATGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: KNGAETERKAIQ*LAQLGIYPMGG Trigger: CCCTCCCATGGGATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCTTTCTTTCAGTCTCTGCTCCATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 72 bp | AAAATCACTGCTCACCTAGGGGAGTTGGAGCTTCACTaGGCTTTGAGTAGAGGCAGACTAGAGCTGAACCTC | + |
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Preference number: 3 (lower is better) Translates to: KITAHLGELELH*ALSRGRLELNL Trigger: GAGGTTCAGCTCTAGTCTGCCTCTACTCAAAGCTCAGTGAAGCTCCAACTCCCCTAGGTGAGCAGTGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| 3UTR TCA 72 bp | CTAAGCCACCAACCAAAGAGTATACTTGAGCTGAGCTaGGGCCCCTGGAACATATGTATCAGAGGACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LSHQPKSILELS*GPWNICIRGLP Trigger: AGGCAGTCCTCTGATACATATGTTCCAGGGGCCTCAGCTCAGCTCAAGTATACTCTTTGGTTGGTGGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 72 bp | CTGCCAGAGACTAAGCCACCAACCAAAGAGTATACTTaGGCTGAGCTGAGGCCCCTGGAACATATGTATCAG | + |
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Preference number: 3 (lower is better) Translates to: LPETKPPTKEYT*AELRPLEHMYQ Trigger: CTGATACATATGTTCCAGGGGCCTCAGCTCAGCTCAAGTATACTCTTTGGTTGGTGGCTTAGTCTCTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 72 bp | GAGACAGATGCAGATACTCACAGCCTACCATTGGACTaGGGTCAGGACACCTATGGAAGAGTTAGGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ETDADTHSLPLD*GQDTYGRVRRR Trigger: CCTTCTCCTAACTCTTCCATAGGTGTCCTGACCTCAGTCCAATGGTAGGCTGTGAGTATCTGCATCTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR-3UTR CAA 90 bp | GGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGATGCTATGTCAGGGTGGCATTTCTTaGGCTTCCTCTAGCCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: GIYPMGGHQILTLLLMLCQGGIS*ASSSPY Trigger: GTAAGGGCTAGAGGAAGCCAAAGAAATGCCACCCTG...ACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR TCA 72 bp | GGTTTCTCATTAACTGCTACATCAAAACCGAGTCACTaGGAAATGCTGGTAAGGCTCAGAGGGGAGGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GFSLTATSKPSH*EMLVRLRGEGH Trigger: GTGACCCTCCCCTCTGAGCCTTACCAGCATTTCTCAGTGACTCGGTTTTGATGTAGCAGTTAATGAGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 72 bp | TTTACCTCCCTCAGATTGAGCAGGGTGGCATTTCTTTaGCTTCCTCTAGCCCTTACTCAGGCACAATATCAG | + |
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Preference number: 3 (lower is better) Translates to: FTSLRLSRVAFL*LPLALTQAQYQ Trigger: CTGATATTGTGCCTGAGTAAGGGCTAGAGGAAGCCAAAGAAATGCCACCCTGCTCAATCTGAGGGAGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 72 bp | ATAGGAAGACCAACAATGTCAACTAACCTAGATCCCTaGGAGCTGCCAGAGACTAAGCCACCAACCAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: IGRPTMSTNLDP*ELPETKPPTKE Trigger: CTCTTTGGTTGGTGGCTTAGTCTCTGGCAGCTCCCAGGGATCTAGGTTAGTTGACATTGTTGGTCTTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CCA 72 bp | CTAGAATGCTGCATCCCTCCACTATGTCTAATGCCTTaGAATAGCCCAGTGAGTCTTCTAGGCCATTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LECCIPPLCLMP*NSPVSLLGHWM Trigger: CATCCAATGGCCTAGAAGACTCACTGGGCTATTCCAAGGCATTAGACATAGTGGAGGGATGCAGCATTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR TCA 72 bp | CTCTATGCACTAAGTCATTTAGCAGCCACAACTCCATaGGTTCCAGGACAGCCAGGACTACACAGAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LYALSHLAATTP*VPGQPGLHRKT Trigger: GGTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGCTAAATGACTTAGTGCATAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR GCA 72 bp | GGCCATGGCAGTCTTTCTCCAATGTCTGCATGGAGGTaGAGAGGTTCTAAGAGCATGTATATAAGCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GHGSLSPMSAWR*RGSKSMYISRK Trigger: CTTTCTGCTTATATACATGCTCTTAGAACCTCTGCACCTCCATGCAGACATTGGAGAAAGACTGCCATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTCAGGAGCAAATGGAATaGATGGAGTTGTGTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKLISCCYGLECCIPPLCQEQME*MELCVG Trigger: ACCCACACACAACTCCATCAATTCCATTTGCTCCTG...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR TCA 72 bp | GCTGTCCAATATGGACTCTACCATCAGGTGCATAGCTaGAGTGTGGTGAATGCAACTGAAGGTGTGCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: AVQYGLYHQVHS*SVVNATEGVQF Trigger: AAATTGCACACCTTCAGTTGCATTCACCACACTTCAGCTATGCACCTGATGGTAGAGTCCATATTGGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | AGAAGACGAAGTGAAAGCAACAGGACTGAAGTGATATaGACCCAAACAACAATCTGCAGGAGGAAGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRRSESNRTEVI*TQTTICRRKQG Trigger: TCCCTGCTTCCTCCTGCAGATTGTTGTTTGGGTTCATATCACTTCAGTCCTGTTGCTTTCACTTCGTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR GCA 72 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTaGATCCCTCCACTATGTCTAATGCCTTGGAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GKLISCCYGLEC*IPPLCLMPWNS Trigger: GCTATTCCAAGGCATTAGACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR CCA 72 bp | ATCCAGTTAGGTAGTATCTGGGTACAACATAGTTTCTaGGTGCAGAAAAGACCAGTGGCATTCATGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQLGSIWVQHSF*VQKRPVAFMAS Trigger: TGAAGCCATGAATGCCACTGGTCTTTTCTGCACCCAGAAACTATGTTGTACCCAGATACTACCTAACTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR CCA 72 bp | GGGTACAAACGGCAGCTTAGTTTCCCAGCTCTAAAGTaGCTTATAGATCCGTTATGGCCTTCAAAACAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GYKRQLSFPALK*LIDPLWPSKQS Trigger: TGATTGTTTTGAAGGCCATAACGGATCTATAAGCCACTTTAGAGCTGGGAAACTAAGCTGCCGTTTGTACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | AATGTACAATTCCTTTGTAAGGATTCCTTGCAGGTGTaGGAAGATCATCCTGTAGTGTCCGACATGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NVQFLCKDSLQV*EDHPVVSDMPQ Trigger: TTGAGGCATGTCGGACACTACAGGATGATCTTCTCACACCTGCAAGGAATCCTTACAAAGGAATTGTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | TCACAGATATCTCAAACTCCATTCTCAGGGGATCCATaGCCACTTTTGGCTTCAGATACCAGGAATATACAC | + |
|
Preference number: 3 (lower is better) Translates to: SQISQTPFSGDP*PLLASDTRNIH Trigger: GTGTATATTCCTGGTATCTGAAGCCAAAAGTGGTCATGGATCCCCTGAGAATGGAGTTTGAGATATCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR CCA 72 bp | GACAGTTATTGGTGGGATATCCAGTTAGGTAGTATCTaGGTACAACATAGTTTCTGGGTGCAGAAAAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: DSYWWDIQLGSI*VQHSFWVQKRP Trigger: TGGTCTTTTCTGCACCCAGAAACTATGTTGTACCCAGATACTACCTAACTGGATATCCCACCAATAACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | CCAGTGTTCTCAAAGTATATCAGGAGCAAATGGAATTaGTGGAGTTGTGTGTGGGTTGGTAAGGATAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PVFSKYIRSKWN*WSCVWVGKDSL Trigger: TAAACTATCCTTACCAACCCACACACAACTCCATCAATTCCATTTGCTCCTGATATACTTTGAGAACACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR GCA 72 bp | AATTTTAAATCAGCTGGTGGAAAGGAATCAGACAACTaGTGCATGATACAGTTTTGCTGTTTGGTGGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NFKSAGGKESDN*CMIQFCCLVAL Trigger: TAGAGCCACCAAACAGCAAAACTGTATCATGCAGCAGTTGTCTGATTCCTTTCCACCAGCTGATTTAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR CCA 72 bp | TTTGGTCTTTTAGAGCCTTATCAAGACAGTTATTGGTaGGATATCCAGTTAGGTAGTATCTGGGTACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FGLLEPYQDSYW*DIQLGSIWVQH Trigger: ATGTTGTACCCAGATACTACCTAACTGGATATCCCACCAATAACTGTCTTGATAAGGCTCTAAAAGACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR CCA 72 bp | CTAGATTTTGGCTCTATAAAACTGACATTGAACTTCTaGCCTGCAGAAATACACACGGGTAAACTTATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LDFGSIKLTLNF*PAEIHTGKLMC Trigger: ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTTTATAGAGCCAAAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | ACATTTCTCTGTATTAAATCAACACCTCTCCTGACATaGCTTGCCCTTTGTAGGCTGTTTAAGGTTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: TFLCIKSTPLLT*LALCRLFKVRF Trigger: AAATCTAACCTTAAACAGCCTACAAAGGGCAAGTCATGTCAGGAGAGGTGTTGATTTAATACAGAGAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR GCA 72 bp | TTATTGTATCTGAAGGACAGTATGAACGTGTTCACATaGAATGTTGTCCAAAACACTTCTGTGACAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LLYLKDSMNVFT*NVVQNTSVTKT Trigger: GGTTTTTGTCACAGAAGTGTTTTGGACAACATTGCATGTGAACACGTTCATACTGTCCTTCAGATACAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR GCA 72 bp | CACACATGCATAAACACACTCACACATACACATGTATaGTTGTGCACACATGCCCATAAAAATCATAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HTCINTLTHTHV*LCTHAHKNHSL Trigger: TAAACTATGATTTTTATGGGCATGTGTGCACAAGCATACATGTGTATGTGTGAGTGTGTTTATGCATGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR TCA 72 bp | TGGCCTTCAAAACAATCATTTATATCCACAGTCCCTTaGAATGGTGAAGTAGCAAACACTACTGTAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: WPSKQSFISTVP*NGEVANTTVIH Trigger: ATGTATTACAGTAGTGTTTGCTACTTCACCATTTCAAGGGACTGTGGATATAAATGATTGTTTTGAAGGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| 3UTR TCA 72 bp | TCTGTTTACTTTCAAACAATTACACAGCGTGAGAAATaGAGTGAAGGTAAACTGATATCGTGCTGTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVYFQTITQREK*SEGKLISCCYG Trigger: ACCATAACAGCACGATATCAGTTTACCTTCACTTCATTTCTCACGCTGTGTAATTGTTTGAAAGTAAACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCACAACTCCATGAGTTCCAGGACAGCCAGGACTACACAGAAAAACCCTCTGGTAAAGGCATACTaGCACTGGGGCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHNSMSSRTARTTQKNPLVKAY*HWGRPR Trigger: CCTGGGCCTGCCCCAGTGGCAGTATGCCTTTACCAG...AGGGTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | TGCCCCAGGAAAGGGAGATGCTTGGCGGGAGGGAGCACCCTCTTAGAGGCAAAGTCTTCATTTCCTTCTTaGGTATCGTCCTCTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPRKGRCLAGGSTLLEAKSSFPS*VSSSRS Trigger: AGACCTAGAGGACGATACTCAAGAAGGAAATGAAGA...CTTTGCCTCTAAGAGGGTGCTCCCTCCCGCCAAGCATCTCCCTTTCCTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACACCTATGGAAGAGTTAGGAGAAGGATTGACGGAGCTGAAGGGGATGGCAGCTACCTTGGCCTGTaGGCTAATGCCATAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDTYGRVRRRIDGAEGDGSYLGL*ANAIAG Trigger: ACCAGCTATGGCATTAGCCCACAGGCCAAGGTAGCT...GCCATCCCCTTCAGCTCCGTCAATCCTTCTCCTAACTCTTCCATAGGTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGGCCTAAGGCTTTGGTCTCTCAGGAGAATGCCGCTGCCACAGGGCCAACACTCCAGGTCATGTaGAAACCATTGGTCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQRPKALVSQENAAATGPTLQVM*KPLVIK Trigger: CTTGATGACCAATGGTTTTCACATGACCTGGAGTGT...TGGCCCTGTGGCAGCGGCATTCTCCTGAGAGACCAAAGCCTTAGGCCTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAAAAGGCATACTGCCACTaGGGCAGGCCCAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEKAYCH*GRPRWV Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAGTATGCCTT...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCACAACTCCATGAGTTCCAGGACAGCCAGGACTACACAGAAAAACCCTGAAGACTGGATGAGCTaGGTCAGTTTTGAAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSHNSMSSRTARTTQKNPEDWMS*VSFEMP Trigger: CGGCATTTCAAAACTGACTCAGCTCATCCAGTCTTC...AGGGTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAGGCCATCCAGTGACTGGCCCAACTTGGGATCTATCCCATGGGAGGGCATCCAGCTCAAATATTaGACTGCGACAGTCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KERPSSDWPNLGSIPWEGIQLKY*TATVKV Trigger: CACTTTGACTGTCGCAGTGCAATATTTGAGCTGGAT...GCCCTCCCATGGGATAGATCCCAAGTTGGGCCAGTCACTGGATGGCCTTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR CCA 90 bp | TATAGAGATGAATGGGTTGGGATACCCCCAGTATCTTTCCTTCTGAAGAAACTTAAGGCATACTGCCACTaGGGCAGGCCCAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRDEWVGIPPVSFLLKKLKAYCH*GRPRWV Trigger: CACCCACCTGGGCCTGCCCCAGTGGCAGTATGCCTT...AAGTTTCTTCAGAAGGAAAGATACTGGGGGTATCCCAACCCATTCATCTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAATCAGCTGGTGGAAAGGAATCAGACAACTGCTGCATGATACAGTTTTGCCTGGTAAAGGCATACTaGCACTGGGGCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSAGGKESDNCCMIQFCLVKAY*HWGRPR Trigger: CCTGGGCCTGCCCCAGTGGCAGTATGCCTTTACCAG...GCAAAACTGTATCATGCAGCAGTTGTCTGATTCCTTTCCACCAGCTGATTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | CAGGACACCTATGGAAGAGTTAGGAGAAGGATTGACGGAGCTGAAGGGGATGGCGTTTTTCTGTTCCCATaGAGAAATCATATGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDTYGRVRRRIDGAEGDGVFLFP*RNHMTL Trigger: GAGCGTCATATGATTTCTTCATGGGAACAGAAAAAC...GCCATCCCCTTCAGCTCCGTCAATCCTTCTCCTAACTCTTCCATAGGTGTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCACAACTCCATGAGTTCCAGGACAGCCAGGACTACACAGAAAAACCCTGAGCTGAGTCAGTTTTaGAATGCCGTTAATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHNSMSSRTARTTQKNPELSQF*NAVNHH Trigger: ATGGTGATTAACGGCATTTCAAAACTGACTCAGCTC...AGGGTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCACAACTCCATGAGTTCCAGGACAGCCAGGACTACACAGAAAAACCCTGTTTTTCTGTTCCCATaGAGAAATCATATGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHNSMSSRTARTTQKNPVFLFP*RNHMTL Trigger: GAGCGTCATATGATTTCTTCATGGGAACAGAAAAAC...AGGGTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCATGGAGTTGTGGCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | GGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGATGCTATGTCATATCTCAGTGTCATaGGCTAACCCAGGTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GIYPMGGHQILTLLLMLCHISVS*ANPGFP Trigger: TGGGAAACCTGGGTTAGCTCATGACACTGAGATATG...ACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | GTGACAAAAACCTTCCCCTTTCTGTGCTGTCCAATATGGACTCTACCATCAGGTTGGGTTTGTACATACTaGACCATTGCTTGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTKTFPFLCCPIWTLPSGWVCTY*TIAWPV Trigger: CACAGGCCAAGCAATGGTTCAGTATGTACAAACCCA...ACCTGATGGTAGAGTCCATATTGGACAGCACAGAAAGGGGAAGGTTTTTGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | GTGACAAAAACCTTCCCCTTTCTGTGCTGTCCAATATGGACTCTACCATCAGGTCCCATTCCCATTGCATaGATCCAGCTCAAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKTFPFLCCPIWTLPSGPIPIA*IQLKYC Trigger: GCAATATTTGAGCTGGATTCATGCAATGGGAATGGG...ACCTGATGGTAGAGTCCATATTGGACAGCACAGAAAGGGGAAGGTTTTTGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAAAAACCTTCCCCTTTCTGTGCTGTCCAATATGGACTCTACCATCAGGTGCTCAAATATTGCACTaGGACAGTCAAAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTKTFPFLCCPIWTLPSGAQILH*DSQSEA Trigger: AGCCTCACTTTGACTGTCGCAGTGCAATATTTGAGC...ACCTGATGGTAGAGTCCATATTGGACAGCACAGAAAGGGGAAGGTTTTTGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR GCA 90 bp | ACTCTATGCACTAAGTCATTTAGCAGCCACAACTCCATGAGTTCCAGGACAGCCATCCAGCTCAAATATTaGACTGCGACAGTCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCTKSFSSHNSMSSRTAIQLKY*TATVKV Trigger: CACTTTGACTGTCGCAGTGCAATATTTGAGCTGGAT...GGCTGTCCTGGAACTCATGGAGTTGTGGCTGCTAAATGACTTAGTGCATAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACACCTATGGAAGAGTTAGGAGAAGGATTGACGGAGCTGAAGGGGATGGCCTAACAGATGTTGCTTaGAAATTCATGCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDTYGRVRRRIDGAEGDGLTDVA*KFMLSS Trigger: AGAAGAAAGCATGAATTTCCAAGCAACATCTGTTAG...GCCATCCCCTTCAGCTCCGTCAATCCTTCTCCTAACTCTTCCATAGGTGTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| 3UTR CAA 72 bp | CAACTTGGGATCTATCCCATGGGAGGGCACCAAATCTaGACACTATTACTGATGCTATGTTGTGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLGIYPMGGHQI*TLLLMLCCACR Trigger: TCTGCAAGCACAACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCCAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | GGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGATGCTATGTGAGCTGAGTCAGTTTTaGAATGCCGTTAATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIYPMGGHQILTLLLMLCELSQF*NAVNHH Trigger: ATGGTGATTAACGGCATTTCAAAACTGACTCAGCTC...ACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTTGGTGCATTAGGAAGTaGGTACACAGAAGACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKLISCCYGLECCIPPLCWCIRK*VHRRLD Trigger: ATCCAGTCTTCTGTGTACTCACTTCCTAATGCACCA...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAACTGATATCGTGCTGTTATGGTCTAGAATGCTGCATCCCTCCACTATGTCCCATTCCCATTGCATaGATCCAGCTCAAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLISCCYGLECCIPPLCPIPIA*IQLKYC Trigger: GCAATATTTGAGCTGGATTCATGCAATGGGAATGGG...ACATAGTGGAGGGATGCAGCATTCTAGACCATAACAGCACGATATCAGTTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAACATATCTCAGTGTCATaGGCTAACCCAGGTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEHISVS*ANPGFP Trigger: TGGGAAACCTGGGTTAGCTCATGACACTGAGATATG...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAACATGAAGAAATCATATaGCGCTCAGCAGGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEHEEII*RSAGSF Trigger: AAAGCTGCCTGCTGAGCGTCATATGATTTCTTCATG...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | TTTAAATCAGCTGGTGGAAAGGAATCAGACAACTGCTGCATGATACAGTTTTGCGAAGACTGGATGAGCTaGGTCAGTTTTGAAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FKSAGGKESDNCCMIQFCEDWMS*VSFEMP Trigger: CGGCATTTCAAAACTGACTCAGCTCATCCAGTCTTC...GCAAAACTGTATCATGCAGCAGTTGTCTGATTCCTTTCCACCAGCTGATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAATGGTGCATTAGGAAGTaGGTACACAGAAGACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEWCIRK*VHRRLD Trigger: ATCCAGTCTTCTGTGTACTCACTTCCTAATGCACCA...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | AAGACCAGTGGCATTCATGGCTTCATGTGTAACCTATTTCATTTTGATGGTTTTTGTCGGACTCTTCTGTaGGCAGGCTTGTGTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSGIHGFMCNLFHFDGFCRTLL*AGLCCR Trigger: CCTACAACACAAGCCTGCTCACAGAAGAGTCCGACA...AAAACCATCAAAATGAAATAGGTTACACATGAAGCCATGAATGCCACTGGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAATCTTGTTCTTGCTCTTaGACACTTTGCTGGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PAEIHTGKLMCIKPSGPESCSCS*TLCWGL Trigger: TAGACCCCAGCAAAGTGTTCAAGAGCAAGAACAAGA...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR GCA 90 bp | GAAAGGACAGGTATAAAGGCACAAGTGAGAACCCAACTGGTGTCTTGCAAGCAACTTTCCCATTCCCATTaGATGAATCCAGCTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: ERTGIKAQVRTQLVSCKQLSHSH*MNPAQI Trigger: TATTTGAGCTGGATTCATGCAATGGGAATGGGAAAG...TTGCTTGCAAGACACCAGTTGGGTTCTCACTTGTGCCTTTATACCTGTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR TCA 90 bp | TATAGAGATGAATGGGTTGGGATACCCCCAGTATCTTTCCTTCTGAAGAAACTTCATGAAGAAATCATATaGCGCTCAGCAGGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: YRDEWVGIPPVSFLLKKLHEEII*RSAGSF Trigger: AAAGCTGCCTGCTGAGCGTCATATGATTTCTTCATG...AAGTTTCTTCAGAAGGAAAGATACTGGGGGTATCCCAACCCATTCATCTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CAA 72 bp | ATCCAATCATCTTATCCCCACATGATACCAGTGACTTaGGTGCACAATTCTAAGTCTAGGGATCACACCTTT | + |
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Preference number: 4 (lower is better) Translates to: IQSSYPHMIPVT*VHNSKSRDHTF Trigger: AAAGGTGTGATCCCTAGACTTAGAATTGTGCACCAAAGTCACTGGTATCATGTGGGGATAAGATGATTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR TCA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTTCTTCATTTCCTTCTTaGGTATCGTCCTCTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCSSFPS*VSSSRS Trigger: AGACCTAGAGGACGATACTCAAGAAGGAAATGAAGA...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR GCA 90 bp | GGGATCTATCCCATGGGAGGGCACCAAATCTTGACACTATTACTGATGCTATGTGTTTCTAACAGATGTTaGTTGGAAATTCATGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GIYPMGGHQILTLLLMLCVSNRC*LEIHAF Trigger: GAAAGCATGAATTTCCAAGCAACATCTGTTAGAAAC...ACATAGCATCAGTAATAGTGTCAAGATTTGGTGCCCTCCCATGGGATAGATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS-3UTR GCA 90 bp | CCATTGCCACTTGACGATACTGTCCTTATCCTCTTTCATATTTATAGTAAGAGTGCTCAAATATTGCACTaGGACAGTCAAAGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLPLDDTVLILFHIYSKSAQILH*DSQSEA Trigger: AGCCTCACTTTGACTGTCGCAGTGCAATATTTGAGC...ACTCTTACTATAAATATGAAAGAGGATAAGGACAGTATCGTCAAGTGGCAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS-3UTR GCA 90 bp | AAGACCAGTGGCATTCATGGCTTCATGTGTAACCTATTTCATTTTGATGGTTTTTACATACTGAACCATTaGTTGGCCTGTGGGCTAATG | + |
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Preference number: 4 (lower is better) Translates to: KTSGIHGFMCNLFHFDGFYILNH*LACGLM Trigger: CATTAGCCCACAGGCCAAGCAATGGTTCAGTATGTA...AAAACCATCAAAATGAAATAGGTTACACATGAAGCCATGAATGCCACTGGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CCA 90 bp | TTCATGAGTCAAACCATGGGTTTATTTGGGAGGGTGACCTCTCTAATTACTGCTTCATGTGAAAACCATTaGTCATCAAGTAGAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FMSQTMGLFGRVTSLITASCENH*SSSRSF Trigger: GAAACTTCTACTTGATGACCAATGGTTTTCACATGA...AGCAGTAATTAGAGAGGTCACCCTCCCAAATAAACCCATGGTTTGACTCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CCA 90 bp | CCATTGCCACTTGACGATACTGTCCTTATCCTCTTTCATATTTATAGTAAGAGTTCATGTGAAAACCATTaGTCATCAAGTAGAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PLPLDDTVLILFHIYSKSSCENH*SSSRSF Trigger: GAAACTTCTACTTGATGACCAATGGTTTTCACATGA...ACTCTTACTATAAATATGAAAGAGGATAAGGACAGTATCGTCAAGTGGCAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| 3UTR CAA 72 bp | AAAAACCGTGTCAGTAATTATAACAGCCATTGCCACTaGACGATACTGTCCTTATCCTCTTTCATATTTATA | + |
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Preference number: 4 (lower is better) Translates to: KNRVSNYNSHCH*TILSLSSFIFI Trigger: TATAAATATGAAAGAGGATAAGGACAGTATCGTCAAGTGGCAATGGCTGTTATAATTACTGACACGGTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGGAAAGGGAGATGCTTGGCGGGAGGGAGCACCCTCTTAGAGGCAAAGTCTAACAGATGTTGCTaGGAAATTCATGCTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CPRKGRCLAGGSTLLEAKSNRCC*EIHAFF Trigger: GAAGAAAGCATGAATTTCCAAGCAACATCTGTTAGA...CTTTGCCTCTAAGAGGGTGCTCCCTCCCGCCAAGCATCTCCCTTTCCTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAGGCCTAAGGCTTTGGTCTCTCAGGAGAATGCCGCTGCCACAGGGCCAACTTTCCCATTCCCATaGCATGAATCCAGCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: KQRPKALVSQENAAATGPTFPFP*HESSSN Trigger: ATTTGAGCTGGATTCATGCAATGGGAATGGGAAAGT...TGGCCCTGTGGCAGCGGCATTCTCCTGAGAGACCAAAGCCTTAGGCCTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | AAACAAAGGCCTAAGGCTTTGGTCTCTCAGGAGAATGCCGCTGCCACAGGGCCATCAGGCATCACACAATaGTTTTTCTGTTCCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: KQRPKALVSQENAAATGPSGITQ*FFCSHE Trigger: TTCATGGGAACAGAAAAACAATTGTGTGATGCCTGA...TGGCCCTGTGGCAGCGGCATTCTCCTGAGAGACCAAAGCCTTAGGCCTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | ACTCTATGCACTAAGTCATTTAGCAGCCACAACTCCATGAGTTCCAGGACAGCCGTACATACTGAACCATaGCTTGGCCTGTGGGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: TLCTKSFSSHNSMSSRTAVHTEP*LGLWAN Trigger: ATTAGCCCACAGGCCAAGCAATGGTTCAGTATGTAC...GGCTGTCCTGGAACTCATGGAGTTGTGGCTGCTAAATGACTTAGTGCATAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | ACTCTATGCACTAAGTCATTTAGCAGCCACAACTCCATGAGTTCCAGGACAGCCAGCTTGTTCACAAAGTaGTCGGACTCTTCTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: TLCTKSFSSHNSMSSRTASLFTK*SDSSVS Trigger: GCTCACAGAAGAGTCCGACAACTTTGTGAACAAGCT...GGCTGTCCTGGAACTCATGGAGTTGTGGCTGCTAAATGACTTAGTGCATAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | CTCACAGCCTACCATTGGACTGAGGTCAGGACACCTATGGAAGAGTTAGGAGAAAATCCAGCTCAAATATaGCACTGCGACAGTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTAYHWTEVRTPMEELGENPAQI*HCDSQS Trigger: ACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATT...TTCTCCTAACTCTTCCATAGGTGTCCTGACCTCAGTCCAATGGTAGGCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS TCA 90 bp | AGAGTTGGTGCATTAGGAAGTGAGTACACAGAAGACTGGATGAGCTaGGTCAGTTTTGAAATGCCGTTAATCACCATGCTTCCCAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RVGALGSEYTEDWMS*VSFEMPLITMLPSG Trigger: TCCACTGGGAAGCATGGTGATTAACGGCATTTCAAAACTGACTCAGCTCATCCAGTCTTCTGTGTACTCACTTCCTAATGCACCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS-3UTR CAA 90 bp | CTCACAGCCTACCATTGGACTGAGGTCAGGACACCTATGGAAGAGTTAGGAGAATCAGGCATCACACAATaGTTTTTCTGTTCCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: LTAYHWTEVRTPMEELGESGITQ*FFCSHE Trigger: TTCATGGGAACAGAAAAACAATTGTGTGATGCCTGA...TTCTCCTAACTCTTCCATAGGTGTCCTGACCTCAGTCCAATGGTAGGCTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAAATACTGAACCATTGCTaGGCCTGTGGGCTAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEILNHC*ACGLMP Trigger: TGGCATTAGCCCACAGGCCAAGCAATGGTTCAGTAT...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS GCA 90 bp | CAGGTTTCCCATTTTTGTAGACGAGGCAAACTTTCCCATTCCCATTaGATGAATCCAGCTCAAATATTGCACTGCGACAGTCAAAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: QVSHFCRRGKLSHSH*MNPAQILHCDSQSE Trigger: CTCACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATTCATGCAATGGGAATGGGAAAGTTTGCCTCGTCTACAAAAATGGGAAACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGAAATACACACGGGTAAACTTATGTGTATTAAGCCATCAGGTCCTGAAATCTTGTTCTTGCTCTaGAACACTTTGCTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: PAEIHTGKLMCIKPSGPEILFLL*NTLLGS Trigger: AGACCCCAGCAAAGTGTTCAAGAGCAAGAACAAGAT...TTCAGGACCTGATGGCTTAATACACATAAGTTTACCCGTGTGTATTTCTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | AAACTGACATTGAACTTCTGGCCTGCAGAAATACACACGGGTAAACTTATGTGTAATCCAGCTCAAATATaGCACTGCGACAGTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: KLTLNFWPAEIHTGKLMCNPAQI*HCDSQS Trigger: ACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATT...ACACATAAGTTTACCCGTGTGTATTTCTGCAGGCCAGAAGTTCAATGTCAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCTGTGGGAGGCTGTCATCCAATTAAATTTCAGTTATCCCCCATTCTTCAGGCCCTTTCTTTTTaGGGATTAAAATCTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TEAVGGCHPIKFQLSPILQALSF*GLKSCS Trigger: AGAACAAGATTTTAATCCCAAAAAAGAAAGGGCCTG...AAGAATGGGGGATAACTGAAATTTAATTGGATGACAGCCTCCCACAGCTTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115817.3 |
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| CDS TCA 72 bp | CCTCGGTCACACCTGGGGAAGATTCCAGGATGCGAGTaGCGCCTAGGGTCAACTTCTCAAGGTGCGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PRSHLGKIPGCE*RLGSTSQGAAC Trigger: GCAAGCCGCACCTTGAGAAGTTGACCCTAGGCGTCACTCGCATCCTGGAATCTTCCCCAGGTGTGACCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS GCA 72 bp | AAATCATATGACGCTCAGCAGGCAGCTTTTCTATTATaGTCACCTCGGTCACACCTGGGGAAGATTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: KSYDAQQAAFLL*SPRSHLGKIPG Trigger: TCCTGGAATCTTCCCCAGGTGTGACCGAGGTGAGCATAATAGAAAAGCTGCCTGCTGAGCGTCATATGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS CAA 90 bp | CGAGGCAAACTTTCCCATTCCCATTGCATGAATCCAGCTCAAATATaGCACTGCGACAGTCAAAGTGAGGCTTCTCTAGCTGGTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGKLSHSHCMNPAQI*HCDSQSEASLAGGL Trigger: AAGACCACCAGCTAGAGAAGCCTCACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATTCATGCAATGGGAATGGGAAAGTTTGCCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS GCA 72 bp | CATTCCCATTGCATGAATCCAGCTCAAATATTGCACTaGGACAGTCAAAGTGAGGCTTCTCTAGCTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: HSHCMNPAQILH*DSQSEASLAGG Trigger: ACCACCAGCTAGAGAAGCCTCACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATTCATGCAATGGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS CCA 72 bp | TTCTTCTTGACTATAGATAGAAGCTACCTTGGCCTGTaGGCTAATGCCATAGCTGGTAAAGGCATACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FFLTIDRSYLGL*ANAIAGKGILP Trigger: TGGCAGTATGCCTTTACCAGCTATGGCATTAGCCCACAGGCCAAGGTAGCTTCTATCTATAGTCAAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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| CDS CAA 72 bp | CTTTCCCATTCCCATTGCATGAATCCAGCTCAAATATaGCACTGCGACAGTCAAAGTGAGGCTTCTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSHSHCMNPAQI*HCDSQSEASLA Trigger: AGCTAGAGAAGCCTCACTTTGACTGTCGCAGTGCAATATTTGAGCTGGATTCATGCAATGGGAATGGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS GCA 72 bp | CATTTTTGTAGACGAGGCAAACTTTCCCATTCCCATTaGATGAATCCAGCTCAAATATTGCACTGCGACAGT | + |
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Preference number: 6 (lower is better) Translates to: HFCRRGKLSHSH*MNPAQILHCDS Trigger: ACTGTCGCAGTGCAATATTTGAGCTGGATTCATGCAATGGGAATGGGAAAGTTTGCCTCGTCTACAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115817.3 ENSMUST00000148255.8 |
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| CDS CAA 90 bp | CCATTGGTTTCTAACAGATGTTGCTTGGAAATTCATGCTTTCTTCTaGACTATAGATAGAAGCTACCTTGGCCTGTGGGCTAATGCCATA | + |
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Preference number: 6 (lower is better) Translates to: PLVSNRCCLEIHAFF*TIDRSYLGLWANAI Trigger: TATGGCATTAGCCCACAGGCCAAGGTAGCTTCTATCTATAGTCAAGAAGAAAGCATGAATTTCCAAGCAACATCTGTTAGAAACCAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148255.8 |
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