Pregenerated sensors for TPGS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020308Ensembl transcript IDs: ENSMUST00000020552.8, ENSMUST00000239401.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTaGAGGTCCCAAGTCCTGGGCAGGTGGCGGGATGTGGGTGCATCG | + |
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Preference number: 1 (lower is better) Translates to: PFLGDDPVQNAGTSV*RSQVLGRWRDVGAS Trigger: CGATGCACCCACATCCCGCCACCTGCCCAGGACTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR GCA 90 bp | GTAGGCAGGCCAGTACAGAGGGGATTGAGCTGCAGGTGCTGGTCCTaGAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: VGRPVQRGLSCRCWS*KVQAGTPSWVMTLC Trigger: GCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCACCTGCAGCTCAATCCCCTCTGTACTGGCCTGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGAGCAGGTCCCAAGTCCTaGGCAGGTGGCGGGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: KVQAGTPSWVMTLCRMPGAGPKS*AGGGMW Trigger: CCACATCCCGCCACCTGCCCAGGACTTGGGACCTGC...TCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGGCCGGGACATCAGTTTaGAGGTCCCAAGTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VLVLQSPSGYPFLGDDPVAGTSV*RSQVLG Trigger: GCCCAGGACTTGGGACCTGCAAACTGATGTCCCGGC...CACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR CCA 72 bp | GGCAGGCCAGTACAGAGGGGATTGAGCTGCAGGTGCTaGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRPVQRGLSCRC*SCKVQAGTPSW Trigger: CCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCACCTGCAGCTCAATCCCCTCTGTACTGGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR GCA 72 bp | GTAGGCAGGCCAGTACAGAGGGGATTGAGCTGCAGGTaGTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: VGRPVQRGLSCR*WSCKVQAGTPS Trigger: GGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCACCTGCAGCTCAATCCCCTCTGTACTGGCCTGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| 3UTR GCA 72 bp | GTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTaGAGAATGCCGGGACATCAGTTTGCAGGTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VQAGTPSWVMTL*RMPGHQFAGPK Trigger: CTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGTCGCCGCCCGCTTGCTaGCCTGTCCAGGGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: QSPSGYPFLGDDPVQNAGSPPAC*PVQGTR Trigger: GCGCGTGCCCTGGACAGGGCAGCAAGCGGGCGGCGA...CCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGCGGGATGTGGGTGCATCGTGGTACTCCTCGCGGGCCATaGGCACACTGGGTCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QFAGPKSWAGGGMWVHRGTPRGP*AHWVAA Trigger: GGCGGCGACCCAGTGTGCCCATGGCCCGCGAGGAGT...ACCACGATGCACCCACATCCCGCCACCTGCCCAGGACTTGGGACCTGCAAACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | GCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTTCGCCGCCCGCTTGCTaGCCTGTCCAGGGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: AGTPSWVMTLCRMPGHQFSPPAC*PVQGTR Trigger: GCGCGTGCCCTGGACAGGGCAGCAAGCGGGCGGCGA...AAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | CCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTGTCCAGCACGGCCTaGCCCACACGCCGATCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSGYPFLGDDPVQNAGTSVSSTA*PTRRSA Trigger: GGCCGATCGGCGTGTGGGCCAGGCCGTGCTGGACAC...TGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | GCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTCGGCCCAGGCGCTGTTaGTGCAGGAGGAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGTPSWVMTLCRMPGHQFRPRRC*CRRSWP Trigger: GGGCCAGCTCCTCCTGCAGCAACAGCGCCTGGGCCG...AAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGGAGGGCGCCGGCGCGTaGCACGAATTCCAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QSPSGYPFLGDDPVQNAGEGAGA*HEFQQH Trigger: GTGCTGCTGGAATTCGTGGCACGCGCCGGCGCCCTC...CCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCGAGGGCGCCGGCGCGTaGCACGAATTCCAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CWSCKVQAGTPSWVMTLCEGAGA*HEFQQH Trigger: GTGCTGCTGGAATTCGTGGCACGCGCCGGCGCCCTC...GCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGAGGGTCCTCCAGCAGCTaGAAGAGGGCGCCGGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: KVQAGTPSWVMTLCRMPGGSSSS*KRAPAR Trigger: ACGCGCCGGCGCCCTCTTCCAGCTGCTGGAGGACCC...TCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGAACTCCTCGCGGGCCATaGGCACACTGGGTCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KVQAGTPSWVMTLCRMPGTPRGP*AHWVAA Trigger: GGCGGCGACCCAGTGTGCCCATGGCCCGCGAGGAGT...TCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCCGATCGGCCACCGCTTaGCCAGGGTCCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSWVMTLCRMPGHQFAGPRSATA*PGSSSS Trigger: GCTGCTGGAGGACCCTGGTCAAGCGGTGGCCGATCG...GGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGCGGCCCAGGCGCTGTTaGTGCAGGAGGAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SWVMTLCRMPGHQFAGPKRPRRC*CRRSWP Trigger: GGGCCAGCTCCTCCTGCAGCAACAGCGCCTGGGCCG...CTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCGCGCCAAGAAGGCGATaGGCTCCTCGGGCCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: CWSCKVQAGTPSWVMTLCAPRRR*APRAGS Trigger: AGATCCGGCCCGAGGAGCCCATCGCCTTCTTGGCGC...GCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGGCGCCAAGAAGGCGATaGGCTCCTCGGGCCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: PVQNAGTSVCRSQVLGRWAPRRR*APRAGS Trigger: AGATCCGGCCCGAGGAGCCCATCGCCTTCTTGGCGC...CCACCTGCCCAGGACTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGGGGTCCTCCAGCAGCTaGAAGAGGGCGCCGGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: SWVMTLCRMPGHQFAGPKGSSSS*KRAPAR Trigger: ACGCGCCGGCGCCCTCTTCCAGCTGCTGGAGGACCC...CTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | ACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTGTGTCCAGCACGGCCTaGCCCACACGCCGATCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TPSWVMTLCRMPGHQFAGVSSTA*PTRRSA Trigger: GGCCGATCGGCGTGTGGGCCAGGCCGTGCTGGACAC...ACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | AGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTGTCCTCTGCGAGTGGTaGGCCAGGCGAAGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGYPFLGDDPVQNAGTSVVLCEW*ARRRCH Trigger: GTGGCACCTTCGCCTGGCTCACCACTCGCAGAGGAC...AACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | TCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGCGATCGGCCACCGCTTaGCCAGGGTCCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SWVMTLCRMPGHQFAGPKRSATA*PGSSSS Trigger: GCTGCTGGAGGACCCTGGTCAAGCGGTGGCCGATCG...CTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | CAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTCCGTCACGCCGAGCTaGCGTAGGAAGTCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QAGTPSWVMTLCRMPGHQSVTPS*RRKSSS Trigger: CGAGGAGGACTTCCTACGGCAGCTCGGCGTGACGGA...CTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGGTCCTCTGCGAGTGGTaGGCCAGGCGAAGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SCKVQAGTPSWVMTLCRMVLCEW*ARRRCH Trigger: GTGGCACCTTCGCCTGGCTCACCACTCGCAGAGGAC...CATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | ACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTGCAGCTCGCTGTACGTaGGCCCATCCAGCCCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: TPSWVMTLCRMPGHQFAGAARCT*AHPAPV Trigger: AACCGGGGCTGGATGGGCGCACGTACAGCGAGCTGC...ACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | GTGCTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGTGTTGCCATGTCTCCTaGGCTCAGCGCACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VLVLQSPSGYPFLGDDPVCCHVS*AQRTLQ Trigger: CTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACA...CACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGGATCTTGCGAAGCAGTaGCGCCACCACCTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QSPSGYPFLGDDPVQNAGDLAKQ*RHHLLR Trigger: CCTGAGGAGGTGGTGGCGCCACTGCTTCGCAAGATC...CCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | CAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGCGCTCACGTTGTTGTTaGAGGCGGTCCTCTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: QAGTPSWVMTLCRMPGHQRSRCC*RRSSAS Trigger: ACTCGCAGAGGACCGCCTTCAACAACAACGTGAGCG...CTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | CCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGCGCTCACGTTGTTGTTaGAGGCGGTCCTCTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: PVQNAGTSVCRSQVLGRWRSRCC*RRSSAS Trigger: ACTCGCAGAGGACCGCCTTCAACAACAACGTGAGCG...CCACCTGCCCAGGACTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGTCCGTCACGCCGAGCTaGCGTAGGAAGTCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SCKVQAGTPSWVMTLCRMSVTPS*RRKSSS Trigger: CGAGGAGGACTTCCTACGGCAGCTCGGCGTGACGGA...CATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | AAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGATGTTGCCATGTCTCCTaGGCTCAGCGCACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KVQAGTPSWVMTLCRMPGCCHVS*AQRTLQ Trigger: CTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACA...TCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | GCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGTGCGTGGGTGCTGTTaGCATGTCTCCTGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGTPSWVMTLCRMPGHQFVRGCC*HVSCAQ Trigger: CTGAGCGCAGGAGACATGGCAACAGCACCCACGCAC...AAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | CAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGCAGGTAGTGCGTGGGTaGTGTTGCCATGTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QAGTPSWVMTLCRMPGHQQVVRG*CCHVSC Trigger: GCAGGAGACATGGCAACAGCACCCACGCACTACCTG...CTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGAGAGGCACAGCCTCATaGTCCCGGCACTGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: QSPSGYPFLGDDPVQNAGRGTAS*SRHWIL Trigger: CAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCT...CCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR TCA 90 bp | GGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCACAGCATGCCGGTTCTaGAGATGCCCAGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GYPFLGDDPVQNAGTSVCTACRF*RCPEAQ Trigger: CTGTGCCTCTGGGCATCTTCAGAACCGGCATGCTGT...GCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGGTGCGTGGGTGCTGTTaGCATGTCTCCTGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SCKVQAGTPSWVMTLCRMVRGCC*HVSCAQ Trigger: CTGAGCGCAGGAGACATGGCAACAGCACCCACGCAC...CATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | GTGCTGGTCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGGGCAATGAAGAGGGCTaGAGCCTTCTCCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: VLVLQSPSGYPFLGDDPVGNEEG*SLLQEL Trigger: GAGTTCCTGGAGAAGGCTGCAGCCCTCTTCATTGCC...CACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGACCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGGGCAATGAAGAGGGCTaGAGCCTTCTCCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: PVQNAGTSVCRSQVLGRWGNEEG*SLLQEL Trigger: GAGTTCCTGGAGAAGGCTGCAGCCCTCTTCATTGCC...CCACCTGCCCAGGACTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | GCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTTCTTCTTGCGGCCGCTaGCACTCAGACACTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: AGTPSWVMTLCRMPGHQFSSCGR*HSDTRR Trigger: CCTACGAGTGTCTGAGTGCCAGCGGCCGCAAGAAGA...AAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | AGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTAGAGGCACAGCCTCATaGTCCCGGCACTGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: SGYPFLGDDPVQNAGTSVRGTAS*SRHWIL Trigger: CAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCT...AACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR CCA 90 bp | GCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTCCTCCAGGTAGTGCGTaGGTGCTGTTGCCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AGTPSWVMTLCRMPGHQFPPGSA*VLLPCL Trigger: GAGACATGGCAACAGCACCCACGCACTACCTGGAGG...AAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAAGCAGGTAGTGCGTGGGTaGTGTTGCCATGTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWVMTLCRMPGHQFAGPKQVVRG*CCHVSC Trigger: GCAGGAGACATGGCAACAGCACCCACGCACTACCTG...CTTGGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGTCTTCTTGCGGCCGCTaGCACTCAGACACTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCKVQAGTPSWVMTLCRMSSCGR*HSDTRR Trigger: CCTACGAGTGTCTGAGTGCCAGCGGCCGCAAGAAGA...CATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGCCTCCAGGTAGTGCGTaGGTGCTGTTGCCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPFLGDDPVQNAGTSVCRPPGSA*VLLPCL Trigger: GAGACATGGCAACAGCACCCACGCACTACCTGGAGG...CCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS TCA 90 bp | AGTGTGTCCAGCACGGCCTGGCCCACACGCCGATCGGCCACCGCTTaGCCAGGGTCCTCCAGCAGCTGGAAGAGGGCGCCGGCGCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSTAWPTRRSATA*PGSSSSWKRAPARA Trigger: GGCACGCGCCGGCGCCCTCTTCCAGCTGCTGGAGGACCCTGGTCAAGCGGTGGCCGATCGGCGTGTGGGCCAGGCCGTGCTGGACACACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | GGGCTGCAGCCTTCTCCAGGAACTCCTCGCGGGCCATGGGCACACTaGGTCGCCGCCCGCTTGCTGCCCTGTCCAGGGCACGCGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLQPSPGTPRGPWAH*VAARLLPCPGHAPG Trigger: ACCTGGCGCGTGCCCTGGACAGGGCAGCAAGCGGGCGGCGACCCAGTGTGCCCATGGCCCGCGAGGAGTTCCTGGAGAAGGCTGCAGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | GCGCCCCGCCGTCCCTGCAAACACGCTTCAGCAGCTCGCTGTACGTaGGCCCATCCAGCCCCGGTTTCTTCTTGCGGCCGCTGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: APRRPCKHASAARCT*AHPAPVSSCGRWHS Trigger: TGAGTGCCAGCGGCCGCAAGAAGAAACCGGGGCTGGATGGGCGCACGTACAGCGAGCTGCTGAAGCGTGTTTGCAGGGACGGCGGGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | GTTGCTGCAGGAGGAGCTGGCCCGGGGGCTCCCCGGCGCCTCCGTTaGTCGGCGAGCGTAGACCCATGTTCTCGAAGTAGTGCGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAAGGAGPGAPRRLR*SASVDPCSRSSAPR Trigger: TCTTGGCGCACTACTTCGAGAACATGGGTCTACGCTCGCCGACCAACGGAGGCGCCGGGGAGCCCCCGGGCCAGCTCCTCCTGCAGCAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | AGGGCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTGGGTGCTGTTaGCATGTCTCCTGCGCTCAGCGCACCCTCCAGTGTGTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAQARTGLQVVRGCC*HVSCAQRTLQCVQH Trigger: GTGCTGGACACACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | CCGGTTCTGAAGATGCCCAGAGGCACAGCCTCATGGTCCCGGCACTaGATCTTGCGAAGCAGTGGCGCCACCACCTCCTCAGGCGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVLKMPRGTASWSRH*ILRSSGATTSSGAP Trigger: CGGGGCGCCTGAGGAGGTGGTGGCGCCACTGCTTCGCAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGGGCATCTTCAGAACCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | CCAGGTTGTCAGGGCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTaGGTGCTGTTGCCATGTCTCCTGCGCTCAGCGCACCCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCQGPSANRPPGSA*VLLPCLLRSAHPPV Trigger: CACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGCCCTGACAACCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | GTTGTCAGGGCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTGGGTaGTGTTGCCATGTCTCCTGCGCTCAGCGCACCCTCCAGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVRAQARTGLQVVRG*CCHVSCAQRTLQCV Trigger: GACACACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGCCCTGACAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | CGCCTGAGACACCGACGTCCGGCCACTGTCCGGGAAATTGGCCGCTaGTGCTACTGCCGGCCGCCGTTTCTCCACTGCCGCCATCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLRHRRPATVREIGR*CYCRPPFLHCRHLC Trigger: ACAAAGATGGCGGCAGTGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGGACGTCGGTGTCTCAGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | CGCTTGACCAGGGTCCTCCAGCAGCTGGAAGAGGGCGCCGGCGCGTaGCACGAATTCCAGCAGCACAAAGCAGGACAGCATGCCGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLTRVLQQLEEGAGA*HEFQQHKAGQHAGS Trigger: AGAACCGGCATGCTGTCCTGCTTTGTGCTGCTGGAATTCGTGGCACGCGCCGGCGCCCTCTTCCAGCTGCTGGAGGACCCTGGTCAAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | CTGAGACACCGACGTCCGGCCACTGTCCGGGAAATTGGCCGCTGGTaGTACTGCCGGCCGCCGTTTCTCCACTGCCGCCATCTTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRHRRPATVREIGRW*YCRPPFLHCRHLCW Trigger: CCAACAAAGATGGCGGCAGTGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGGACGTCGGTGTCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239401.2 |
||
| CDS GCA 90 bp | TCAGCAGCTCGCTGTACGTGCGCCCATCCAGCCCCGGTTTCTTCTTaGGGCCGCTGGCACTCAGACACTCGTAGGCCACGCTCACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAARCTCAHPAPVSS*GRWHSDTRRPRSRC Trigger: ACAACGTGAGCGTGGCCTACGAGTGTCTGAGTGCCAGCGGCCGCAAGAAGAAACCGGGGCTGGATGGGCGCACGTACAGCGAGCTGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | GCGAGCGTAGACCCATGTTCTCGAAGTAGTGCGCCAAGAAGGCGATaGGCTCCTCGGGCCGGATCTCCAGCACCTTTAGGAGGGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASVDPCSRSSAPRRR*APRAGSPAPLGGLR Trigger: GCGCAGCCCTCCTAAAGGTGCTGGAGATCCGGCCCGAGGAGCCCATCGCCTTCTTGGCGCACTACTTCGAGAACATGGGTCTACGCTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 90 bp | CAGGACAGCATGCCGGTTCTGAAGATGCCCAGAGGCACAGCCTCATaGTCCCGGCACTGGATCTTGCGAAGCAGTGGCGCCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSMPVLKMPRGTAS*SRHWILRSSGATTS Trigger: GGAGGTGGTGGCGCCACTGCTTCGCAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGGGCATCTTCAGAACCGGCATGCTGTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCCAAGCGGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGCTGCCGCCATCTTTGTaGGGGGCAGCGGGACCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QSPSGYPFLGDDPVQNAGLPPSL*GAAGPE Trigger: TTCCGGTCCCGCTGCCCCCAACAAAGATGGCGGCAG...CCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCCGCTTGGACTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGCGGGATGTGGGTGCATCGTGGTGCCACGCTCACGTTGTaGTTGAAGGCGGTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFAGPKSWAGGGMWVHRGATLTL*LKAVLC Trigger: GCAGAGGACCGCCTTCAACAACAACGTGAGCGTGGC...ACCACGATGCACCCACATCCCGCCACCTGCCCAGGACTTGGGACCTGCAAACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCAGGTCCCAAGTCCTGGGCAGGTGGCGGGATGTGGGTGCATCGTGGTACGCTCACGTTGTTGTaGAAGGCGGTCCTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QFAGPKSWAGGGMWVHRGTLTLL*KAVLCE Trigger: CTCGCAGAGGACCGCCTTCAACAACAACGTGAGCGT...ACCACGATGCACCCACATCCCGCCACCTGCCCAGGACTTGGGACCTGCAAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTGAGTGGGGTAGGCAGGCCAGTACAGAGGGGATTGAGCTGCAGGTGCTCCCGGCACTGGATCTaGCGAAGCAGTGGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSGVGRPVQRGLSCRCSRHWI*RSSGAT Trigger: GGTGGCGCCACTGCTTCGCAAGATCCAGTGCCGGGA...GCACCTGCAGCTCAATCCCCTCTGTACTGGCCTGCCTACCCCACTCACAGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGGTCCCAGTGCGTGGGTGCTGTaGCCATGTCTCCTGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSWVMTLCRMPGHQFAGPSAWVL*PCLLRS Trigger: TGAGCGCAGGAGACATGGCAACAGCACCCACGCACT...GGGACCTGCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | GGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCAGTGCGTGGGTGCTGTaGCCATGTCTCCTGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GYPFLGDDPVQNAGTSVCSAWVL*PCLLRS Trigger: TGAGCGCAGGAGACATGGCAACAGCACCCACGCACT...GCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS TCA 90 bp | GTGCCACGAATTCCAGCAGCACAAAGCAGGACAGCATGCCGGTTCTaGAGATGCCCAGAGGCACAGCCTCATGGTCCCGGCACTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VPRIPAAQSRTACRF*RCPEAQPHGPGTGS Trigger: AGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGGGCATCTTCAGAACCGGCATGCTGTCCTGCTTTGTGCTGCTGGAATTCGTGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | GGGTACCCCTTCCTGGGTGATGACCCTGTGCAGAATGCCGGGACATCAGTTTGCACGCTCACGTTGTTGTaGAAGGCGGTCCTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GYPFLGDDPVQNAGTSVCTLTLL*KAVLCE Trigger: CTCGCAGAGGACCGCCTTCAACAACAACGTGAGCGT...GCAAACTGATGTCCCGGCATTCTGCACAGGGTCATCACCCAGGAAGGGGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTGAGTGGGGTAGGCAGGCCAGTACAGAGGGGATTGAGCTGCAGGTGCGCCACGCTCACGTTGTaGTTGAAGGCGGTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSGVGRPVQRGLSCRCATLTL*LKAVLC Trigger: GCAGAGGACCGCCTTCAACAACAACGTGAGCGTGGC...GCACCTGCAGCTCAATCCCCTCTGTACTGGCCTGCCTACCCCACTCACAGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | CGAAGGTGCCACAGCGCGCGGCCCAGGCGCTGTTGCTaGAGGAGGAGCTGGCCCGGGGGCTCCCCGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRCHSARPRRCC*RRSWPGGSPAP Trigger: AGGCGCCGGGGAGCCCCCGGGCCAGCTCCTCCTGCAGCAACAGCGCCTGGGCCGCGCGCTGTGGCACCTTCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | AGGCGAAGGTGCCACAGCGCGCGGCCCAGGCGCTGTTaGTGCAGGAGGAGCTGGCCCGGGGGCTCCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRRCHSARPRRC*CRRSWPGGSPA Trigger: CGCCGGGGAGCCCCCGGGCCAGCTCCTCCTGCAGCAACAGCGCCTGGGCCGCGCGCTGTGGCACCTTCGCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS TCA 72 bp | AGCACGGCCTGGCCCACACGCCGATCGGCCACCGCTTaGCCAGGGTCCTCCAGCAGCTGGAAGAGGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: STAWPTRRSATA*PGSSSSWKRAP Trigger: CGGCGCCCTCTTCCAGCTGCTGGAGGACCCTGGTCAAGCGGTGGCCGATCGGCGTGTGGGCCAGGCCGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | AGGAGGGCTGCGCGCAGCATCTCCGTCACGCCGAGCTaGCGTAGGAAGTCCTCCTCGCTCTCAGCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRAARSISVTPS*RRKSSSLSAAA Trigger: GGCGGCCGCTGAGAGCGAGGAGGACTTCCTACGGCAGCTCGGCGTGACGGAGATGCTGCGCGCAGCCCTCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | CCTTCTCCAGGAACTCCTCGCGGGCCATGGGCACACTaGGTCGCCGCCCGCTTGCTGCCCTGTCCAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSPGTPRGPWAH*VAARLLPCPGH Trigger: GTGCCCTGGACAGGGCAGCAAGCGGGCGGCGACCCAGTGTGCCCATGGCCCGCGAGGAGTTCCTGGAGAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | GGGCTGCAGCCTTCTCCAGGAACTCCTCGCGGGCCATaGGCACACTGGGTCGCCGCCCGCTTGCTGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLQPSPGTPRGP*AHWVAARLLPC Trigger: ACAGGGCAGCAAGCGGGCGGCGACCCAGTGTGCCCATGGCCCGCGAGGAGTTCCTGGAGAAGGCTGCAGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | CACCGACGTCCGGCCACTGTCCGGGAAATTGGCCGCTaGTGCTACTGCCGGCCGCCGTTTCTCCACTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HRRPATVREIGR*CYCRPPFLHCR Trigger: GCGGCAGTGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGGACGTCGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | GGAGGAGCTGGCCCGGGGGCTCCCCGGCGCCTCCGTTaGTCGGCGAGCGTAGACCCATGTTCTCGAAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGAGPGAPRRLR*SASVDPCSRSS Trigger: ACTACTTCGAGAACATGGGTCTACGCTCGCCGACCAACGGAGGCGCCGGGGAGCCCCCGGGCCAGCTCCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | CGACGTCCGGCCACTGTCCGGGAAATTGGCCGCTGGTaGTACTGCCGGCCGCCGTTTCTCCACTGCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRPATVREIGRW*YCRPPFLHCRH Trigger: ATGGCGGCAGTGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGGACGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | CCAGAGGCACAGCCTCATGGTCCCGGCACTGGATCTTaGGAAGCAGTGGCGCCACCACCTCCTCAGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PEAQPHGPGTGS*EAVAPPPPQAP Trigger: GGGCGCCTGAGGAGGTGGTGGCGCCACTGCTTCGCAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | GCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTGGGTaGTGTTGCCATGTCTCCTGCGCTCAGCGCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQARTGLQVVRG*CCHVSCAQRTL Trigger: GAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | CAGGGCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTaGGTGCTGTTGCCATGTCTCCTGCGCTCAGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGPSANRPPGSA*VLLPCLLRSAH Trigger: GTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CAA 72 bp | CCCAGAGGCACAGCCTCATGGTCCCGGCACTGGATCTaGCGAAGCAGTGGCGCCACCACCTCCTCAGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRGTASWSRHWI*RSSGATTSSGA Trigger: GGCGCCTGAGGAGGTGGTGGCGCCACTGCTTCGCAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CAA 90 bp | CAGGGCCCAAGCGCGAACCGGCCTCCAGGTAGTGCGTGGGTGCTGTaGCCATGTCTCCTGCGCTCAGCGCACCCTCCAGTGTGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGPSANRPPGSAWVL*PCLLRSAHPPVCPA Trigger: TGCTGGACACACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCTTGGGCCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | GCGCGAACCGGCCTCCAGGTAGTGCGTGGGTGCTGTTaGCATGTCTCCTGCGCTCAGCGCACCCTCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARTGLQVVRGCC*HVSCAQRTLQC Trigger: ACACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | CCTGAGACACCGACGTCCGGCCACTGTCCGGGAAATTaGCCGCTGGTGCTACTGCCGGCCGCCGTTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PETPTSGHCPGN*PLVLLPAAVSP Trigger: TGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGGACGTCGGTGTCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS CAA 72 bp | AGCGCGAACCGGCCTCCAGGTAGTGCGTGGGTGCTGTaGCCATGTCTCCTGCGCTCAGCGCACCCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SANRPPGSAWVL*PCLLRSAHPPV Trigger: CACTGGAGGGTGCGCTGAGCGCAGGAGACATGGCAACAGCACCCACGCACTACCTGGAGGCCGGTTCGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | CGTCCCTGCAAACACGCTTCAGCAGCTCGCTGTACGTaGGCCCATCCAGCCCCGGTTTCTTCTTGCGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPCKHASAARCT*AHPAPVSSCGR Trigger: GCGGCCGCAAGAAGAAACCGGGGCTGGATGGGCGCACGTACAGCGAGCTGCTGAAGCGTGTTTGCAGGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
||
| CDS GCA 72 bp | CCGGCCACTGTCCGGGAAATTGGCCGCTGGTGCTACTaGCGGCCGCCGTTTCTCCACTGCCGCCATCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PATVREIGRWCY*RPPFLHCRHLC Trigger: ACAAAGATGGCGGCAGTGGAGAAACGGCGGCCGGCAGTAGCACCAGCGGCCAATTTCCCGGACAGTGGCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239401.2 |
||
| CDS CCA 72 bp | TGCGCCCATCCAGCCCCGGTTTCTTCTTGCGGCCGCTaGCACTCAGACACTCGTAGGCCACGCTCACGTTGT | + |
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Preference number: 6 (lower is better) Translates to: CAHPAPVSSCGR*HSDTRRPRSRC Trigger: ACAACGTGAGCGTGGCCTACGAGTGTCTGAGTGCCAGCGGCCGCAAGAAGAAACCGGGGCTGGATGGGCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS CCA 72 bp | ATGCCGGTTCTGAAGATGCCCAGAGGCACAGCCTCATaGTCCCGGCACTGGATCTTGCGAAGCAGTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: MPVLKMPRGTAS*SRHWILRSSGA Trigger: GGCGCCACTGCTTCGCAAGATCCAGTGCCGGGACCATGAGGCTGTGCCTCTGGGCATCTTCAGAACCGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS TCA 72 bp | CACTCAGACACTCGTAGGCCACGCTCACGTTGTTGTTaGAGGCGGTCCTCTGCGAGTGGTGAGCCAGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: HSDTRRPRSRCC*RRSSASGEPGE Trigger: TTCGCCTGGCTCACCACTCGCAGAGGACCGCCTTCAACAACAACGTGAGCGTGGCCTACGAGTGTCTGAGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS TCA 72 bp | ATTCCAGCAGCACAAAGCAGGACAGCATGCCGGTTCTaGAGATGCCCAGAGGCACAGCCTCATGGTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: IPAAQSRTACRF*RCPEAQPHGPG Trigger: GCCGGGACCATGAGGCTGTGCCTCTGGGCATCTTCAGAACCGGCATGCTGTCCTGCTTTGTGCTGCTGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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| CDS CCA 72 bp | GACCCATGTTCTCGAAGTAGTGCGCCAAGAAGGCGATaGGCTCCTCGGGCCGGATCTCCAGCACCTTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: DPCSRSSAPRRR*APRAGSPAPLG Trigger: TCCTAAAGGTGCTGGAGATCCGGCCCGAGGAGCCCATCGCCTTCTTGGCGCACTACTTCGAGAACATGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020552.8 ENSMUST00000239401.2 |
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