Pregenerated sensors for TPD52L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000827Ensembl transcript IDs: ENSMUST00000000844.15, ENSMUST00000069712.9, ENSMUST00000108799.10, ENSMUST00000108800.8, ENSMUST00000141825.2, ENSMUST00000149163.8, ENSMUST00000184588.8, ENSMUST00000184849.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCTTCAAAGGGAGCAGGGCTCCTGGTTCAGTGCTCCTCAGGCCTaGGTGCCCCGCCACCCTGTCCATTTCCTGTGGCCCTTGAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: DLQREQGSWFSAPQA*VPRHPVHFLWPLKG Trigger: TCCTTTCAAGGGCCACAGGAAATGGACAGGGTGGCGGGGCACTCAGGCCTGAGGAGCACTGAACCAGGAGCCCTGCTCCCTTTGAAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR GCA 90 bp | ACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTaGAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: TSSSLSLAGGSVMQS*SCDDERVLLYSVAG Trigger: GCCAGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR GCA 90 bp | TCTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATaGAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: SSKPALHCLWLVALS*RVAAVMMSVCFCTL Trigger: CAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CCA 90 bp | ACAGATAAAGTCTTTGCCCTGCTAAGAGCCATTAAGGCACAGTGCTaGCCCTCTCTCCAAATCATGATCTCAACACACAGGGCCCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: TDKVFALLRAIKAQC*PSLQIMISTHRALV Trigger: TACCAGGGCCCTGTGTGTTGAGATCATGATTTGGAGAGAGGGCCAGCACTGTGCCTTAATGGCTCTTAGCAGGGCAAAGACTTTATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR GCA 90 bp | CTCTCAGTGGGACTTAAGATGCTGGTCTTCCTTAATGCCCTCTTCTaGCAGGTGAGCTCCTGGCATAGCTTCATAGCAAAAGTCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LSVGLKMLVFLNALF*QVSSWHSFIAKVSK Trigger: TTTGCTGACTTTTGCTATGAAGCTATGCCAGGAGCTCACCTGGCAGAAGAGGGCATTAAGGAAGACCAGCATCTTAAGTCCCACTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CCA 90 bp | CTAACCTACAGCACAAGAGCCCTGTGGGTCAGAGTGGAAAGCTATTaGAAAATGCCACTCCTTAAGAGAACCAAGTTTTGCACACCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LTYSTRALWVRVESY*KMPLLKRTKFCTPG Trigger: TCCTGGTGTGCAAAACTTGGTTCTCTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTCTTGTGCTGTAGGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CCA 90 bp | AAGATGCTGGTCTTCCTTAATGCCCTCTTCTGCCAGGTGAGCTCCTaGCATAGCTTCATAGCAAAAGTCAGCAAAACAAGATGTTTACTG | + |
|
Preference number: 1 (lower is better) Translates to: KMLVFLNALFCQVSS*HSFIAKVSKTRCLL Trigger: CAGTAAACATCTTGTTTTGCTGACTTTTGCTATGAAGCTATGCCAGGAGCTCACCTGGCAGAAGAGGGCATTAAGGAAGACCAGCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CCA 90 bp | CTCATCTGCAGAATAAGAGCATACCTCCTAAGGATTGTTGTACCATaGGGTAACAGTCTTCTCTCAGTGGGACTTAAGATGCTGGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LICRIRAYLLRIVVP*GNSLLSVGLKMLVF Trigger: GAAGACCAGCATCTTAAGTCCCACTGAGAGAAGACTGTTACCCCATGGTACAACAATCCTTAGGAGGTATGCTCTTATTCTGCAGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR GCA 90 bp | TTATGTACAAGACTGTTCTCTAATTCATGCCAAGGCAGCCACATCTaGATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTG | + |
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Preference number: 1 (lower is better) Translates to: LCTRLFSNSCQGSHI*MNMGMTVFKTSSSL Trigger: CAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGAGAACAGTCTTGTACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR GCA 90 bp | AAAAGACAGACCAAACAAATGGATGTGGATTTTCCTCCAAAGGAATaGTTTATTGACAAGCTGCCTGCTAATATTTGTAGGAAGATATAT | + |
|
Preference number: 1 (lower is better) Translates to: KRQTKQMDVDFPPKE*FIDKLPANICRKIY Trigger: ATATATCTTCCTACAAATATTAGCAGGCAGCTTGTCAATAAAGCATTCCTTTGGAGGAAAATCCACATCCATTTGTTTGGTCTGTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTCTTCCCTCAGCACTCTGCTGAGACCTTCAAAGGGAGCAGGGCTCCTAGTGCTCCTCAGGCCTaGGTGCCCCGCCACCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SHFFPQHSAETFKGSRAPSAPQA*VPRHPV Trigger: GACAGGGTGGCGGGGCACTCAGGCCTGAGGAGCACT...AGGAGCCCTGCTCCCTTTGAAGGTCTCAGCAGAGTGCTGAGGGAAGAAGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCGAGGCTTGCCCAGTGCGAGGGTCACTCCCCATCCCACCCATACCACTGCTCTTCACTGTCTCTaGCTGGTGGCTCTGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: CGRGLPSARVTPHPTHTTALHCL*LVALSC Trigger: GCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGC...AGTGGTATGGGTGGGATGGGGAGTGACCCTCGCACTGGGCAAGCCTCGACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGGGTCACTCCCCATCCCACCCATACCACTTAGCCCTTTTAATCTGGCCCACAGGGCCCTGGTATTaGGAGGCTGCAGAATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CEGHSPSHPYHLALLIWPTGPWY*EAAECG Trigger: GCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGT...GGGCCAGATTAAAAGGGCTAAGTGGTATGGGTGGGATGGGGAGTGACCCTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAGCCCTGTGGGTCAGAGTGGAAAGCTATTGGAAAATGCCACTCCTTAAGAGTGCTCCTCAGGCCTaGGTGCCCCGCCACCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TRALWVRVESYWKMPLLKSAPQA*VPRHPV Trigger: GACAGGGTGGCGGGGCACTCAGGCCTGAGGAGCACT...CTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCGAGGCTTGCCCAGTGCGAGGGTCACTCCCCATCCCACCCATACCACTTGTAATAACTGGTACTaGCAGGAGTATGAGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: CGRGLPSARVTPHPTHTTCNNWY*QEYEMG Trigger: GCCCATCTCATACTCCTGCCAGTACCAGTTATTACA...AGTGGTATGGGTGGGATGGGGAGTGACCCTCGCACTGGGCAAGCCTCGACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACTGCGACCATGCGATATTACCTAGGTAAGTGTATTCCTCCTGAGCTAGGGGGGCTCCTGGTTCAGTaGTCCTCAGGCCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TTATMRYYLGKCIPPELGGLLVQ*SSGLSA Trigger: GGCACTCAGGCCTGAGGAGCACTGAACCAGGAGCCC...CCCTAGCTCAGGAGGAATACACTTACCTAGGTAATATCGCATGGTCGCAGTTGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TCACACTTCTTCCCTCAGCACTCTGCTGAGACCTTCAAAGGGAGCAGGGCTCCTACTGTCTCTGGCTGGTaGCTCTGTCATGCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SHFFPQHSAETFKGSRAPTVSGW*LCHAEL Trigger: CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGT...AGGAGCCCTGCTCCCTTTGAAGGTCTCAGCAGAGTGCTGAGGGAAGAAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TCACACTTCTTCCCTCAGCACTCTGCTGAGACCTTCAAAGGGAGCAGGGCTCCTTTCACTGTCTCTGGCTaGTGGCTCTGTCATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SHFFPQHSAETFKGSRAPFTVSG*WLCHAE Trigger: CTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAA...AGGAGCCCTGCTCCCTTTGAAGGTCTCAGCAGAGTGCTGAGGGAAGAAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCACTCCCCATCCCACCCATACCACTTAGCCCTTTTAATCTGGCCCACAACTGCTCTTCACTGTCTCTaGCTGGTGGCTCTGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: GHSPSHPYHLALLIWPTTALHCL*LVALSC Trigger: GCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGC...AGTTGTGGGCCAGATTAAAAGGGCTAAGTGGTATGGGTGGGATGGGGAGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGCCCTGTGGGTCAGAGTGGAAAGCTATTGGAAAATGCCACTCCTTAAGAGGGAGCAGGGCTCCTaGTTCAGTGCTCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TRALWVRVESYWKMPLLKREQGS*FSAPQA Trigger: GGCCTGAGGAGCACTGAACCAGGAGCCCTGCTCCCT...CTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCGAGGCTTGCCCAGTGCGAGGGTCACTCCCCATCCCACCCATACCACTAACCAGAAACTAAAATaGACAAATCCCACCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: CGRGLPSARVTPHPTHTTNQKLK*TNPTSP Trigger: GGGTGAGGTGGGATTTGTCCATTTTAGTTTCTGGTT...AGTGGTATGGGTGGGATGGGGAGTGACCCTCGCACTGGGCAAGCCTCGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTTATGGTCCCCACTCGGTCTTCAAATGACTTGAAGGTGGCTGAGTTCCTCGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DFMVPTRSSNDLKVAEFLGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...GAGGAACTCAGCCACCTTCAAGTCATTTGAAGACCGAGTGGGGACCATAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184588.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCACAGACACCTACCTGCCTCTGCCTCCTAAGTGCTGAAGGTGTATATGCCAGTACAGTCGAGGCCTaGGTCCATGAACACAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HSQTPTCLCLLSAEGVYASTVEA*VHEHSH Trigger: ATGACTGTGTTCATGGACCCAGGCCTCGACTGTACT...GGCATATACACCTTCAGCACTTAGGAGGCAGAGGCAGGTAGGTGTCTGTGAGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CAA 90 bp | TGGCCCTCTCTCCAAATCATGATCTCAACACACAGGGCCCTGGTATaGAGAGGCTGCAGAATGTGGCAATTGGAAGCAGGAGGAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: WPSLQIMISTHRALV*RGCRMWQLEAGGKN Trigger: GTTCTTTCCTCCTGCTTCCAATTGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCATGATTTGGAGAGAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCACAGACACCTACCTGCCTCTGCCTCCTAAGTGCTGAAGGTGTATATGCCTCTGTCATGCAGAGTTaGAGCTGTGATGATGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: HSQTPTCLCLLSAEGVYASVMQS*SCDDER Trigger: ACGCTCATCATCACAGCTGCAACTCTGCATGACAGA...GGCATATACACCTTCAGCACTTAGGAGGCAGAGGCAGGTAGGTGTCTGTGAGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATGTAATAAACAGACAGGCAGAGACTATGGACCAGAGCCCTGCCCACTGTGGCCCTTGAAAGGATaGCACAGTGGTCTGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SPCNKQTGRDYGPEPCPLWPLKG*HSGLLH Trigger: ATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCA...CAGTGGGCAGGGCTCTGGTCCATAGTCTCTGCCTGTCTGTTTATTACATGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGACAACTCTCTCTCAGTCTGTATGACAACTGCGACCATGCGATATTACCTAGGGAGCAGGGCTCCTaGTTCAGTGCTCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NRQLSLSLYDNCDHAILPREQGS*FSAPQA Trigger: GGCCTGAGGAGCACTGAACCAGGAGCCCTGCTCCCT...AGGTAATATCGCATGGTCGCAGTTGTCATACAGACTGAGAGAGAGTTGTCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGTTGTTAGTGTAAGAATGAAGCAGTTGCTATGTTTCCTTTCTAGGGTCAGGGAGCAGGGCTCCTaGTTCAGTGCTCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SQVVSVRMKQLLCFLSRVREQGS*FSAPQA Trigger: GGCCTGAGGAGCACTGAACCAGGAGCCCTGCTCCCT...GACCCTAGAAAGGAAACATAGCAACTGCTTCATTCTTACACTAACAACCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGCTCTTCTTCAGCTCCCCAGTTATTCGTTGTTCCTTGCTTTGTGTGGTACTGGTGGCTCTGTCATaGAGAGTTGCAGCTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: GVLFFSSPVIRCSLLCVVLVALS*RVAAVM Trigger: CATCACAGCTGCAACTCTGCATGACAGAGCCACCAG...TACCACACAAAGCAAGGAACAACGAATAACTGGGGAGCTGAAGAAGAGCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATGTAATAAACAGACAGGCAGAGACTATGGACCAGAGCCCTGCCCACTGAGTAAAGCAACACTGTaGAGGGCACATCCCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SPCNKQTGRDYGPEPCPLSKATL*RAHPIQ Trigger: CTGAATGGGATGTGCCCTGCACAGTGTTGCTTTACT...CAGTGGGCAGGGCTCTGGTCCATAGTCTCTGCCTGTCTGTTTATTACATGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCTACAGTACTCTCTGAGGCCTTCATCACCTCATGTGATGAGAACCAGAGTTCAGCAGAGTTCTGGCTaGACCAAAACCACATCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLQYSLRPSSPHVMRTRVQQSSG*TKTTSP Trigger: AGGGGATGTGGTTTTGGTTCAGCCAGAACTCTGCTG...AACTCTGGTTCTCATCACATGAGGTGATGAAGGCCTCAGAGAGTACTGTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCACATCTGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGCTGGTGGCTCTGTCATaGAGAGTTGCAGCTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: SHICMNMGMTVFKTSSSLLVALS*RVAAVM Trigger: CATCACAGCTGCAACTCTGCATGACAGAGCCACCAG...CAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCAGATGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTCCTGGTGGCTCTGTCATaGAGAGTTGCAGCTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: SNSCQGSHICMNMGMTVFLVALS*RVAAVM Trigger: CATCACAGCTGCAACTCTGCATGACAGAGCCACCAG...GAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCAAAGGAATGCTTTATTGACAAGCTGCCTGCTAATATTTGTAGGAAGAGGGCTCCTGGTTCAGTaGTCCTCAGGCCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: FLQRNALLTSCLLIFVGRGLLVQ*SSGLSA Trigger: GGCACTCAGGCCTGAGGAGCACTGAACCAGGAGCCC...TCTTCCTACAAATATTAGCAGGCAGCTTGTCAATAAAGCATTCCTTTGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCACTCCCCATCCCACCCATACCACTTAGCCCTTTTAATCTGGCCCACAACTAGTCTGTATGACAACTaGGACCATGCGATATTACCT | + |
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Preference number: 2 (lower is better) Translates to: GHSPSHPYHLALLIWPTTSLYDN*DHAILP Trigger: AGGTAATATCGCATGGTCGCAGTTGTCATACAGACT...AGTTGTGGGCCAGATTAAAAGGGCTAAGTGGTATGGGTGGGATGGGGAGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGGAGGAGGTCAGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCACTGTCTCTGGCTGGTaGCTCTGTCATGCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGEEVRKEILFTQYSHFFTVSGW*LCHAEL Trigger: CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGT...GAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCTGACCTCCTCCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGAACCAAAACCACATCCCCTACCTGATCTGTAAGGCTGGTTCATTTATTACTGTCTCTGGCTGGTaGCTCTGTCATGCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: WLNQNHIPYLICKAGSFITVSGW*LCHAEL Trigger: CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGT...AATAAATGAACCAGCCTTACAGATCAGGTAGGGGATGTGGTTTTGGTTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTATGACAACTGCGACCATGCGATATTACCTAGGTAAGTGTATTCCTCCTTTCACTGTCTCTGGCTaGTGGCTCTGTCATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VCMTTATMRYYLGKCIPPFTVSG*WLCHAE Trigger: CTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAA...AGGAGGAATACACTTACCTAGGTAATATCGCATGGTCGCAGTTGTCATACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGCCCTGTGGGTCAGAGTGGAAAGCTATTGGAAAATGCCACTCCTTAAGGAAAGGATGGCACAGTaGTCTGCTTCATCTACGAAC | + |
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Preference number: 2 (lower is better) Translates to: TRALWVRVESYWKMPLLKERMAQ*SASSTN Trigger: GTTCGTAGATGAAGCAGACCACTGTGCCATCCTTTC...CTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGGAGGAGGTCAGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCTGGCCCTTGAAAGGATaGCACAGTGGTCTGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LGEEVRKEILFTQYSHFFWPLKG*HSGLLH Trigger: ATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCA...GAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCTGACCTCCTCCCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR-3UTR CCA 90 bp | AATCATGATCTCAACACACAGGGCCCTGGTATTGAGAGGCTGCAGAATGTGGCATGTAATAACTGGTACTaGCAGGAGTATGAGATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NHDLNTQGPGIERLQNVACNNWY*QEYEMG Trigger: GCCCATCTCATACTCCTGCCAGTACCAGTTATTACA...TGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGAGCCCTGTGGGTCAGAGTGGAAAGCTATTGGAAAATGCCACTCCTTAAGTGTAATAACTGGTACTaGCAGGAGTATGAGATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TRALWVRVESYWKMPLLKCNNWY*QEYEMG Trigger: GCCCATCTCATACTCCTGCCAGTACCAGTTATTACA...CTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCACTCCCCATCCCACCCATACCACTTAGCCCTTTTAATCTGGCCCACAACTCCTGGTATATATTCTTaGTCTTATCCAGAGATACAC | + |
|
Preference number: 2 (lower is better) Translates to: GHSPSHPYHLALLIWPTTPGIYS*SYPEIH Trigger: GTGTATCTCTGGATAAGACCAAGAATATATACCAGG...AGTTGTGGGCCAGATTAAAAGGGCTAAGTGGTATGGGTGGGATGGGGAGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTGTCATTATCCTAAAAGACAGACCAAACAAATGGATGTGGATTTTCCTCCCCTCAGCACTCTGCTaGGACCTTCAAAGGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLVIILKDRPNKWMWIFLPSALC*DLQREQ Trigger: CTGCTCCCTTTGAAGGTCTCAGCAGAGTGCTGAGGG...GAGGAAAATCCACATCCATTTGTTTGGTCTGTCTTTTAGGATAATGACAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCCCTCAGCACTCTGCTGAAAGGATGGCACAGTaGTCTGCTTCATCTACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RKEILFTQYSHFFPQHSAERMAQ*SASSTN Trigger: GTTCGTAGATGAAGCAGACCACTGTGCCATCCTTTC...AGCAGAGTGCTGAGGGAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTGTCATTATCCTAAAAGACAGACCAAACAAATGGATGTGGATTTTCCTCGACAGGCAGAGACTATaGACCAGAGCCCTGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: SLVIILKDRPNKWMWIFLDRQRL*TRALPT Trigger: AGTGGGCAGGGCTCTGGTCCATAGTCTCTGCCTGTC...GAGGAAAATCCACATCCATTTGTTTGGTCTGTCTTTTAGGATAATGACAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAACCAAAACCACATCCCCTACCTGATCTGTAAGGCTGGTTCATTTATTCTCTGTAATAACTGGTACTaGCAGGAGTATGAGATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LNQNHIPYLICKAGSFILCNNWY*QEYEMG Trigger: GCCCATCTCATACTCCTGCCAGTACCAGTTATTACA...GAGAATAAATGAACCAGCCTTACAGATCAGGTAGGGGATGTGGTTTTGGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CAA 90 bp | ATATCAGTGACCTACACTCCTGTAATGTGTTCCCTCACACAGCTATaGTTTTTAACCCTGGAAAAGAAGACACCAATGGTGTGCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ISVTYTPVMCSLTQL*FLTLEKKTPMVCSS Trigger: AGAAGAGCACACCATTGGTGTCTTCTTTTCCAGGGTTAAAAACAATAGCTGTGTGAGGGAACACATTACAGGAGTGTAGGTCACTGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCAAAGGAATGCTTTATTGACAAGCTGCCTGCTAATATTTGTAGGAAGAAGTAAAGCAACACTGTaGAGGGCACATCCCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLQRNALLTSCLLIFVGRSKATL*RAHPIQ Trigger: CTGAATGGGATGTGCCCTGCACAGTGTTGCTTTACT...TCTTCCTACAAATATTAGCAGGCAGCTTGTCAATAAAGCATTCCTTTGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAACCAAAACCACATCCCCTACCTGATCTGTAAGGCTGGTTCATTTATTCTCAGAGTGGAAAGCTATTaGAAAATGCCACTCCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LNQNHIPYLICKAGSFILRVESY*KMPLLK Trigger: CTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCT...GAGAATAAATGAACCAGCCTTACAGATCAGGTAGGGGATGTGGTTTTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCGTTGTTCCTTGCTTTGTGTGGTAGAGTATTCTAAGGGTGTCCAAAGAAACGGCAGGAGTATGAGATaGGCCAGAATAAAATTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: IRCSLLCVVEYSKGVQRNGRSMR*ARIKFY Trigger: GTAGAATTTTATTCTGGCCCATCTCATACTCCTGCC...GTTTCTTTGGACACCCTTAGAATACTCTACCACACAAAGCAAGGAACAACGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGTCTTCTCTCAGTGGGACTTAAGATGCTGGTCTTCCTTAATGCCCTCTTCATAAAATGTAATAACTaGTACTGGCAGGAGTATGAG | + |
|
Preference number: 2 (lower is better) Translates to: NSLLSVGLKMLVFLNALFIKCNN*YWQEYE Trigger: CTCATACTCCTGCCAGTACCAGTTATTACATTTTAT...GAAGAGGGCATTAAGGAAGACCAGCATCTTAAGTCCCACTGAGAGAAGACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGACTGGAGCATAGTGAATTGTCTTCCAATATCATCTAGTGCAAATATTGACCTGTTCTCTAATTCATaGCAAGGCAGCCACATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: NDWSIVNCLPISSSANIDLFSNS*QGSHIC Trigger: GCAGATGTGGCTGCCTTGGCATGAATTAGAGAACAG...GTCAATATTTGCACTAGATGATATTGGAAGACAATTCACTATGCTCCAGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCACTCCTTAAGAGAACCAAGTTTTGCACACCAGGAGAAAGTATTAAAGAAAAGTCTGTATGACAACTaGGACCATGCGATATTACCT | + |
|
Preference number: 2 (lower is better) Translates to: CHSLREPSFAHQEKVLKKSLYDN*DHAILP Trigger: AGGTAATATCGCATGGTCGCAGTTGTCATACAGACT...TTTCTTTAATACTTTCTCCTGGTGTGCAAAACTTGGTTCTCTTAAGGAGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTGTCATTATCCTAAAAGACAGACCAAACAAATGGATGTGGATTTTCCTCCTGGTATTGAGAGGCTaGAGAATGTGGCAATTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLVIILKDRPNKWMWIFLLVLRG*RMWQLE Trigger: TTCCAATTGCCACATTCTGCAGCCTCTCAATACCAG...GAGGAAAATCCACATCCATTTGTTTGGTCTGTCTTTTAGGATAATGACAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTAAGGCTGGTTCATTTATTCTCCATGTAATAAACAGACAGGCAGAGACTATGAAGAGAACCAAGTTTTaGACACCAGGAGAAAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: CKAGSFILHVINRQAETMKRTKF*TPGESI Trigger: AATACTTTCTCCTGGTGTGCAAAACTTGGTTCTCTT...CATAGTCTCTGCCTGTCTGTTTATTACATGGAGAATAAATGAACCAGCCTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | CCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATaGAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PALHCLWLVALS*RVAAVMMSVCF Trigger: GAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR TCA 72 bp | CACTCAATACTCACACTTCTTCCCTCAGCACTCTGCTaGGACCTTCAAAGGGAGCAGGGCTCCTGGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSILTLLPSALC*DLQREQGSWFS Trigger: ACTGAACCAGGAGCCCTGCTCCCTTTGAAGGTCTCAGCAGAGTGCTGAGGGAAGAAGTGTGAGTATTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | TCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTaGAGCTGTGATGATGAGCGTGTGCTTCTGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLAGGSVMQS*SCDDERVLLYS Trigger: AGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | CCCTCCAACATGCCCTGGTTCTACCCATTCTCAGCTTaGTCCAGTCTACAGTACTCTCTGAGGCCTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PSNMPWFYPFSA*SSLQYSLRPSS Trigger: TGATGAAGGCCTCAGAGAGTACTGTAGACTGGAGCAAGCTGAGAATGGGTAGAACCAGGGCATGTTGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | TCAGTCGGAGTCTTCCCTAGTACAAACCCTCCAACATaGCCTGGTTCTACCCATTCTCAGCTTGCTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVGVFPSTNPPT*PGSTHSQLAPV Trigger: GACTGGAGCAAGCTGAGAATGGGTAGAACCAGGGCATGTTGGAGGGTTTGTACTAGGGAAGACTCCGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | CGCCACCCTGTCCATTTCCTGTGGCCCTTGAAAGGATaGCACAGTGGTCTGCTTCATCTACGAACTTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RHPVHFLWPLKG*HSGLLHLRTLV Trigger: CACTAAAGTTCGTAGATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCACAGGAAATGGACAGGGTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCGAGGGTCACTCCCCATCCCACCCATACCACTTAGCCCTTTTAATCTGGCCCAGAAACCAGGAATACTaGATAACCAAGACACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CEGHSPSHPYHLALLIWPRNQEY*ITKTPH Trigger: GTGAGGTGTCTTGGTTATCAAGTATTCCTGGTTTCT...GGGCCAGATTAAAAGGGCTAAGTGGTATGGGTGGGATGGGGAGTGACCCTCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | GGAGGAACACATCTTTTAAGGAGTACAGTCGAGGCCTaGGTCCATGAACACAGTCATGTACCCACAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GGTHLLRSTVEA*VHEHSHVPTKP Trigger: GGGCTTTGTGGGTACATGACTGTGTTCATGGACCCAGGCCTCGACTGTACTCCTTAAAAGATGTGTTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | ATGATCTCAACACACAGGGCCCTGGTATTGAGAGGCTaGAGAATGTGGCAATTGGAAGCAGGAGGAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: MISTHRALVLRG*RMWQLEAGGKN Trigger: GTTCTTTCCTCCTGCTTCCAATTGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR TCA 72 bp | CTCACAGACACCTACCTGCCTCTGCCTCCTAAGTGCTaGAGGTGTATATGCCACTATGCCAATCTAGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LTDTYLPLPPKC*RCICHYANLVC Trigger: ACATACTAGATTGGCATAGTGGCATATACACCTTCAGCACTTAGGAGGCAGAGGCAGGTAGGTGTCTGTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | GAGCCCTGTGGGTCAGAGTGGAAAGCTATTGGAAAATaGCACTCCTTAAGAGAACCAAGTTTTGCACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: EPCGSEWKAIGK*HSLREPSFAHQ Trigger: CTGGTGTGCAAAACTTGGTTCTCTTAAGGAGTGGCATTTTCCAATAGCTTTCCACTCTGACCCACAGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | AAAGTCTTTGCCCTGCTAAGAGCCATTAAGGCACAGTaGTGGCCCTCTCTCCAAATCATGATCTCAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KVFALLRAIKAQ*WPSLQIMISTH Trigger: GTGTGTTGAGATCATGATTTGGAGAGAGGGCCAGCACTGTGCCTTAATGGCTCTTAGCAGGGCAAAGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | ACACACAGGGCCCTGGTATTGAGAGGCTGCAGAATGTaGCAATTGGAAGCAGGAGGAAAGAACTTAGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: THRALVLRGCRM*QLEAGGKNLER Trigger: TCTTTCTAAGTTCTTTCCTCCTGCTTCCAATTGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | GTCTTCCTTAATGCCCTCTTCTGCCAGGTGAGCTCCTaGCATAGCTTCATAGCAAAAGTCAGCAAAACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VFLNALFCQVSS*HSFIAKVSKTR Trigger: TCTTGTTTTGCTGACTTTTGCTATGAAGCTATGCCAGGAGCTCACCTGGCAGAAGAGGGCATTAAGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCATGATCTCAACACACAGGGCCCTGGTATTGAGAGGCTGCAGAATGTGGCAGTAAGAATGAAGCAGTaGCTATGTTTCCTTTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: NHDLNTQGPGIERLQNVAVRMKQ*LCFLSR Trigger: CCTAGAAAGGAAACATAGCAACTGCTTCATTCTTAC...TGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | AGAATAAGAGCATACCTCCTAAGGATTGTTGTACCATaGGGTAACAGTCTTCTCTCAGTGGGACTTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RIRAYLLRIVVP*GNSLLSVGLKM Trigger: CATCTTAAGTCCCACTGAGAGAAGACTGTTACCCCATGGTACAACAATCCTTAGGAGGTATGCTCTTATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR GCA 72 bp | GTAAAACATTTATGTACAAGACTGTTCTCTAATTCATaGCAAGGCAGCCACATCTGCATGAACATGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: VKHLCTRLFSNS*QGSHICMNMGM Trigger: CATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGAGAACAGTCTTGTACATAAATGTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CCA 72 bp | TGTAAACCTCTACATTGCATGCCTGGTATATATTCTTaGTCTTATCCAGAGATACACCTTCTACACAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: CKPLHCMPGIYS*SYPEIHLLHNS Trigger: GGAATTGTGTAGAAGGTGTATCTCTGGATAAGACCAAGAATATATACCAGGCATGCAATGTAGAGGTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCTGGTGGCTCTGTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLVALSCRVAAVMMSVCGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...GCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGGCACCTGGCGCAGAGTaGCAATTTCTTCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CLWLVALSCRVAAVMMSVAPGAE*QFLLPP Trigger: AGGTGGAAGAAGAAATTGTCACTCTGCGCCAGGTGC...CACGCTCATCATCACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMQSCSCDDERVLLYSVAGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...AGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCCACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NMGMTVFKTSSSLSLAGGHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...GCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AATCATGATCTCAACACACAGGGCCCTGGTATTGAGAGGCTGCAGAATGTGGCACACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHDLNTQGPGIERLQNVAHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...TGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCATGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTATGGTCCCCACTCGGTCTTCAAATGACTTGAAGGTGGCTGAGTTCCTCCACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFMVPTRSSNDLKVAEFLHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...GAGGAACTCAGCCACCTTCAAGTCATTTGAAGACCGAGTGGGGACCATAAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184588.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGCTCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQSCSCDDERVLLYSVAGSAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...GCCAGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCCATTTCCTGTGGCCCTTGAAAGGATGGCACAGTGGTCTGCTTCATCTGCACCTGGCGCAGAGTaGCAATTTCTTCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PCPFPVALERMAQWSASSAPGAE*QFLLPP Trigger: AGGTGGAAGAAGAAATTGTCACTCTGCGCCAGGTGC...AGATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCACAGGAAATGGACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | AACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NMGMTVFKTSSSLSLAGGGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...GCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCAGTGCCTCTCTTTGGCTaGCAGCACCTGGCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHICMNMGMTVFKTSSSVPLFG*QHLAQS Trigger: ACTCTGCGCCAGGTGCTGGCAGCCAAAGAGAGGCAC...TGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGCAGCTGTCTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSSLSLAGGSVMQSCSCLLDRF*FSSPNV Trigger: CACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAG...ACAGCTGCAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGCAAGCTAGGCGGATGGAGTAGCTaGTCATGTCTCCAAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCDDERVLLYSVAGKLGGWSS*SCLQAS Trigger: GGAAGCTTGGAGACATGAGCAGCTACTCCATCCGCC...TAGCTTGCCAGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069712.9 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGGGCGGATGGAGTAGCTaGTCATGTCTCCAAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQNQLFTVSGWWLCHAELGGWSS*SCLQAS Trigger: GGAAGCTTGGAGACATGAGCAGCTACTCCATCCGCC...CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069712.9 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTACAACTGGAGTCCGGTaGACCACACCTGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VMQSCSCDDERVLLYSVATTGVR*TTPGST Trigger: TGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGT...AGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | CTGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCCACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHEHGYDCLQNQLFTVSGHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...GCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTTCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMQSCSCDDERVLLYSVASAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...AGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| 3UTR CAA 72 bp | ACCCTCCAACATGCCCTGGTTCTACCCATTCTCAGCTaGCTCCAGTCTACAGTACTCTCTGAGGCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLQHALVLPILS*LQSTVLSEAFI Trigger: GATGAAGGCCTCAGAGAGTACTGTAGACTGGAGCAAGCTGAGAATGGGTAGAACCAGGGCATGTTGGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTCTTCTCTCAGTGGGACTTAAGATGCTGGTCTTCCTTAATGCCCTCTTCGTGCCTCTCTTTGGCTaGCAGCACCTGGCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLSVGLKMLVFLNALFVPLFG*QHLAQS Trigger: ACTCTGCGCCAGGTGCTGGCAGCCAAAGAGAGGCAC...GAAGAGGGCATTAAGGAAGACCAGCATCTTAAGTCCCACTGAGAGAAGACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTCGTGCCTCTCTTTGGCTaGCAGCACCTGGCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNSCQGSHICMNMGMTVFVPLFG*QHLAQS Trigger: ACTCTGCGCCAGGTGCTGGCAGCCAAAGAGAGGCAC...GAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGGAGGTCAGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCGTGCCTCTCTTTGGCTaGCAGCACCTGGCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEEVRKEILFTQYSHFFVPLFG*QHLAQS Trigger: ACTCTGCGCCAGGTGCTGGCAGCCAAAGAGAGGCAC...GAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCTGACCTCCTCCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGTGAAAGAGTTTCTTGAGTCTTCTTGTAGAGGTCAGACTGCGTCACTTGTGCCTCTCTTTGGCTaGCAGCACCTGGCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPVKEFLESSCRGQTASLVPLFG*QHLAQS Trigger: ACTCTGCGCCAGGTGCTGGCAGCCAAAGAGAGGCAC...AAGTGACGCAGTCTGACCTCTACAAGAAGACTCAAGAAACTCTTTCACAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184588.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGCACTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRVAAVMMSVCFCTLWLALLDRF*FSSPNV Trigger: CACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAG...TGCCAGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTCTTCTCTCAGTGGGACTTAAGATGCTGGTCTTCCTTAATGCCCTCTTCCACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLSVGLKMLVFLNALFHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...GAAGAGGGCATTAAGGAAGACCAGCATCTTAAGTCCCACTGAGAGAAGACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCCTTGAAAGGATGGCACAGTGGTCTGCTTCATCTACGAACTTTAGTGGCACCTGGCGCAGAGTaGCAATTTCTTCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPLKGWHSGLLHLRTLVAPGAE*QFLLPP Trigger: AGGTGGAAGAAGAAATTGTCACTCTGCGCCAGGTGC...CACTAAAGTTCGTAGATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCACCTGGCGCAGAGTaGCAATTTCTTCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SVMQSCSCDDERVLLYSVAPGAE*QFLLPP Trigger: AGGTGGAAGAAGAAATTGTCACTCTGCGCCAGGTGC...CACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGGAGGAGGTCAGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGEEVRKEILFTQYSHFFGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...GAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCTGACCTCCTCCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGCTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNQLFTVSGWWLCHAELLLDRF*FSSPNV Trigger: CACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAG...CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | ACAACTGCGACCATGCGATATTACCTAGGTAAGTGTATTCCTCCTGAGCTAGGGACAACTGGAGTCCGGTaGACCACACCTGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TTATMRYYLGKCIPPELGTTGVR*TTPGST Trigger: TGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGT...CCCTAGCTCAGGAGGAATACACTTACCTAGGTAATATCGCATGGTCGCAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGCTCTTCTTCAGCTCCCCAGTTATTCGTTGTTCCTTGCTTTGTGTGGTATCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVLFFSSPVIRCSLLCVVSAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...TACCACACAAAGCAAGGAACAACGAATAACTGGGGAGCTGAAGAAGAGCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGTTATCGAGTGGCGGATaGAGTAGCTGCTCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQNQLFTVSGWWLCHAELLSSGG*SSCSCL Trigger: GAGACATGAGCAGCTACTCCATCCGCCACTCGATAA...CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069712.9 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCTCTGTCATGCAGAGTTGGGTCTTCAAATGACTTaGAGGTGGCTGAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQNQLFTVSGWWLCHAELGLQMT*RWLSSS Trigger: TGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACC...CAACTCTGCATGACAGAGCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | AACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTGGCCTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NMGMTVFKTSSSLSLAGGLLDRF*FSSPNV Trigger: CACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAG...GCCACCAGCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCCCTTGAAAGGATGGCACAGTGGTCTGCTTCATCTACGAACTTTAGTGCTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLKGWHSGLLHLRTLVLLDRF*FSSPNV Trigger: CACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAG...CACTAAAGTTCGTAGATGAAGCAGACCACTGTGCCATCCTTTCAAGGGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTCACAACTGGAGTCCGGTaGACCACACCTGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNSCQGSHICMNMGMTVFTTGVR*TTPGST Trigger: TGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGT...GAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTCTTCTCTCAGTGGGACTTAAGATGCTGGTCTTCCTTAATGCCCTCTTCACAACTGGAGTCCGGTaGACCACACCTGGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLSVGLKMLVFLNALFTTGVR*TTPGST Trigger: TGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGT...GAAGAGGGCATTAAGGAAGACCAGCATCTTAAGTCCCACTGAGAGAAGACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AATAGACAACTCTCTCTCAGTCTGTATGACAACTGCGACCATGCGATATTACCTCACAGTGCCTCTCTTTaGCTGCCAGCACCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQLSLSLYDNCDHAILPHSASL*LPAPGA Trigger: TGCGCCAGGTGCTGGCAGCCAAAGAGAGGCACTGTG...AGGTAATATCGCATGGTCGCAGTTGTCATACAGACTGAGAGAGAGTTGTCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGAGGAGGTCAGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCTCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGEEVRKEILFTQYSHFFSAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...GAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCTGACCTCCTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGTGAAAGAGTTTCTTGAGTCTTCTTGTAGAGGTCAGACTGCGTCACTTTCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPVKEFLESSCRGQTASLSAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...AAGTGACGCAGTCTGACCTCTACAAGAAGACTCAAGAAACTCTTTCACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184588.8 |
||
| 3UTR CAA 72 bp | CTCCAAATCATGATCTCAACACACAGGGCCCTGGTATaGAGAGGCTGCAGAATGTGGCAATTGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQIMISTHRALV*RGCRMWQLEAG Trigger: TCCTGCTTCCAATTGCCACATTCTGCAGCCTCTCAATACCAGGGCCCTGTGTGTTGAGATCATGATTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCATGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGGTCTTCAAATGACTTaGAGGTGGCTGAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVMQSCSCDDERVLLYSVGLQMT*RWLSSS Trigger: TGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACC...CACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCATGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAACCAAAACCACATCCCCTACCTGATCTGTAAGGCTGGTTCATTTATTTCAGCTCCCCTAATGTaGAGAGGCCCAGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLNQNHIPYLICKAGSFISAPLM*RGPASF Trigger: AAAGGAGGCTGGGCCTCTCCACATTAGGGGAGCTGA...AATAAATGAACCAGCCTTACAGATCAGGTAGGGGATGTGGTTTTGGTTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGTTGTTAGTGTAAGAATGAAGCAGTTGCTATGTTTCCTTTCTAGGGTCGCACCTGGCGCAGAGTaGCAATTTCTTCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQVVSVRMKQLLCFLSRVAPGAE*QFLLPP Trigger: AGGTGGAAGAAGAAATTGTCACTCTGCGCCAGGTGC...GACCCTAGAAAGGAAACATAGCAACTGCTTCATTCTTACACTAACAACCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACTCCTTAAGAGAACCAAGTTTTGCACACCAGGAGAAAGTATTAAAGAAAGGTGGACAGGGCAGCTaGTGTTTTCTGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHSLREPSFAHQEKVLKKGGQGS*CFLSSL Trigger: CAGGCTGGACAGAAAACATCAGCTGCCCTGTCCACC...TTTCTTTAATACTTTCTCCTGGTGTGCAAAACTTGGTTCTCTTAAGGAGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACATCTGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGGGTCTTCAAATGACTTaGAGGTGGCTGAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHICMNMGMTVFKTSSSLGLQMT*RWLSSS Trigger: TGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACC...CAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCAGATGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCTGGTCTTCAAATGACTTaGAGGTGGCTGAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CMNMGMTVFKTSSSLSLAGLQMT*RWLSSS Trigger: TGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACC...AGCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTGGCTGAGTTCCTCATaGCAGGCATACTTATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSNSCQGSHICMNMGMTVWLSSS*QAYLSS Trigger: ACTCGATAAGTATGCCTGTCATGAGGAACTCAGCCA...GACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000149163.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGAACATGGGTATGACTGTCTTCAAAACCAGCTCTTCACTGTCTCTGGCTTGGCTGAGTTCCTCATaGCAGGCATACTTATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CMNMGMTVFKTSSSLSLAWLSSS*QAYLSS Trigger: ACTCGATAAGTATGCCTGTCATGAGGAACTCAGCCA...AGCCAGAGACAGTGAAGAGCTGGTTTTGAAGACAGTCATACCCATGTTCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000149163.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTATGTACAAGACTGTTCTCTAATTCATGCCAAGGCAGCCACATCTGCACAACTGGAGTCCGGTaGACCACACCTGGGTCAACA | + |
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Preference number: 4 (lower is better) Translates to: KHLCTRLFSNSCQGSHICTTGVR*TTPGST Trigger: TGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGT...GCAGATGTGGCTGCCTTGGCATGAATTAGAGAACAGTCTTGTACATAAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| 3UTR CAA 72 bp | GTGCTCTTCTTCAGCTCCCCAGTTATTCGTTGTTCCTaGCTTTGTGTGGTAGAGTATTCTAAGGGTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VLFFSSPVIRCS*LCVVEYSKGVQ Trigger: TTGGACACCCTTAGAATACTCTACCACACAAAGCAAGGAACAACGAATAACTGGGGAGCTGAAGAAGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR TCA 90 bp | AAACATTTATGTACAAGACTGTTCTCTAATTCATGCCAAGGCAGCCACATCTGCGGTCTTCAAATGACTTaGAGGTGGCTGAGTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KHLCTRLFSNSCQGSHICGLQMT*RWLSSS Trigger: TGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACC...GCAGATGTGGCTGCCTTGGCATGAATTAGAGAACAGTCTTGTACATAAATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR CCA 90 bp | TGCCACTCCTTAAGAGAACCAAGTTTTGCACACCAGGAGAAAGTATTAAAGAAATTATCGAGTGGCGGATaGAGTAGCTGCTCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CHSLREPSFAHQEKVLKKLSSGG*SSCSCL Trigger: GAGACATGAGCAGCTACTCCATCCGCCACTCGATAA...TTTCTTTAATACTTTCTCCTGGTGTGCAAAACTTGGTTCTCTTAAGGAGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069712.9 ENSMUST00000149163.8 |
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| CDS CCA 90 bp | TCTTCTTCCTCCCCCTCTGTCAGGCCTTCTACAACTGGAGTCCGGTaGACCACACCTGGGTCAACAGGGACGTCAGTCATAAAGTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSSSPSVRPSTTGVR*TTPGSTGTSVIKSD Trigger: GTCTGACTTTATGACTGACGTCCCTGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGTAGAAGGCCTGACAGAGGGGGAGGAAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000141825.2 ENSMUST00000149163.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGTTGCAGCTGTGATGATGAGCGTGTGCTTCTGTACTCTGTGGCTGGCATTAGGAGAATTCAGGTaGATATCTTGGCTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: CRVAAVMMSVCFCTLWLALGEFR*ISWLAE Trigger: CTCTGCTAGCCAAGATATCAACCTGAATTCTCCTAA...TGCCAGCCACAGAGTACAGAAGCACACGCTCATCATCACAGCTGCAACTCTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTAGGAGAATTCAGGTaGATATCTTGGCTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FSNSCQGSHICMNMGMTVLGEFR*ISWLAE Trigger: CTCTGCTAGCCAAGATATCAACCTGAATTCTCCTAA...GACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR CAA 90 bp | TCTAATTCATGCCAAGGCAGCCACATCTGCATGAACATGGGTATGACTGTCTTCTTAGGAGAATTCAGGTaGATATCTTGGCTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SNSCQGSHICMNMGMTVFLGEFR*ISWLAE Trigger: CTCTGCTAGCCAAGATATCAACCTGAATTCTCCTAA...GAAGACAGTCATACCCATGTTCATGCAGATGTGGCTGCCTTGGCATGAATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGAAATACTGTTCACTCAATACTCACACTTCTTCCCTCAGCACTCTGCTTTAGGAGAATTCAGGTaGATATCTTGGCTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RKEILFTQYSHFFPQHSALGEFR*ISWLAE Trigger: CTCTGCTAGCCAAGATATCAACCTGAATTCTCCTAA...AGCAGAGTGCTGAGGGAAGAAGTGTGAGTATTGAGTGAACAGTATTTCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS-3UTR CAA 90 bp | ATTCGTTGTTCCTTGCTTTGTGTGGTAGAGTATTCTAAGGGTGTCCAAAGAAACTTAGGAGAATTCAGGTaGATATCTTGGCTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: IRCSLLCVVEYSKGVQRNLGEFR*ISWLAE Trigger: CTCTGCTAGCCAAGATATCAACCTGAATTCTCCTAA...GTTTCTTTGGACACCCTTAGAATACTCTACCACACAAAGCAAGGAACAACGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000844.15 ENSMUST00000108800.8 ENSMUST00000149163.8 |
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| CDS GCA 72 bp | GAGACCTGCACATCATGCCAGCTCCTAGACAGGTTCTaGTTCAGCTCCCCTAATGTGGAGAGGCCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ETCTSCQLLDRF*FSSPNVERPSL Trigger: GAGGCTGGGCCTCTCCACATTAGGGGAGCTGAAGCAGAACCTGTCTAGGAGCTGGCATGATGTGCAGGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000141825.2 ENSMUST00000149163.8 ENSMUST00000184849.8 |
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| CDS CCA 72 bp | TCCCCCTCTGTCAGGCCTTCTACAACTGGAGTCCGGTaGACCACACCTGGGTCAACAGGGACGTCAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: SPSVRPSTTGVR*TTPGSTGTSVI Trigger: TATGACTGACGTCCCTGTTGACCCAGGTGTGGTCCACCGGACTCCAGTTGTAGAAGGCCTGACAGAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000000844.15 ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000108800.8 ENSMUST00000141825.2 ENSMUST00000149163.8 |
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| CDS TCA 72 bp | TATCGAGTGGCGGATGGAGTAGCTGCTAAAGGATTGTaGGAGCGGATGAGCCCTCATGTCTCCAAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: YRVADGVAAKGL*ERMSPHVSKLP Trigger: AGGAAGCTTGGAGACATGAGGGCTCATCCGCTCTCACAATCCTTTAGCAGCTACTCCATCCGCCACTCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108799.10 ENSMUST00000141825.2 |
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| CDS CAA 72 bp | TTAGACTTTATGGTCCCCACTCGGTCTTCAAATGACTaGAAGGTGGCTGAGTTCCTCATGACAGGCATACTT | + |
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Preference number: 6 (lower is better) Translates to: LDFMVPTRSSND*KVAEFLMTGIL Trigger: AAGTATGCCTGTCATGAGGAACTCAGCCACCTTCAAGTCATTTGAAGACCGAGTGGGGACCATAAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069712.9 ENSMUST00000108799.10 ENSMUST00000149163.8 |
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