Pregenerated sensors for TPD52L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000296Ensembl transcript IDs: ENSMUST00000000305.7, ENSMUST00000213528.2, ENSMUST00000213639.2, ENSMUST00000214644.2, ENSMUST00000215515.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAGCAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PAAAQAGPSTAAPRP*SAGSLLKHSVSWRV Trigger: CACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTGCTGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR CCA 90 bp | CCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTaGTTTGGAGACCAAGTCAAAACCAAAGCTAATAATCAGTATCTG | + |
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Preference number: 1 (lower is better) Translates to: PVDLQTGRCTLRHAY*FGDQVKTKANNQYL Trigger: CAGATACTGATTATTAGCTTTGGTTTTGACTTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR GCA 90 bp | ATTGGTTTGGAGACCAAGTCAAAACCAAAGCTAATAATCAGTATCTaGATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCAGA | + |
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Preference number: 1 (lower is better) Translates to: IGLETKSKPKLIISI*MIGKYIEFRRQEFR Trigger: TCTGAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTATTAGCTTTGGTTTTGACTTGGTCTCCAAACCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR TCA 90 bp | TTGGGAAATACATTGAGTTCCGCAGACAAGAATTCAGAACAATTATaGCCCTGCTCCAGGTTGTCTATTTTTAAAGATGACATTTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: LGNTLSSADKNSEQL*PCSRLSIFKDDICK Trigger: TTTACAAATGTCATCTTTAAAAATAGACAACCTGGAGCAGGGTCATAATTGTTCTGAATTCTTGTCTGCGGAACTCAATGTATTTCCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGCAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTGGTCTGCCAGCTGGCGTGTGCTGTaGAGTTCAGGACCTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: PAAAQAGPSTAAPRPWSASWRVL*SSGPPQ Trigger: TTGAGGAGGTCCTGAACTCCACAGCACACGCCAGCT...GGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTGCTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGCAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTGGTCTGCCAAGCATTCTGTGAGCTaGCGTGTGCTGTGGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PAAAQAGPSTAAPRPWSAKHSVS*RVLWSS Trigger: TGAACTCCACAGCACACGCCAGCTCACAGAATGCTT...GGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTGCTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATCAGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IISICMIGKYIEFRRQEFAAPRP*SAGSLL Trigger: CAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGC...GAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214644.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: DDICKYSRVVVINTNAKRAAPRP*SAGSLL Trigger: CAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGC...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAGTGCACTCTGAGACATaGATATTGGTTTGGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQVHSET*ILVWRP Trigger: TGGTCTCCAAACCAATATGCATGTCTCAGAGTGCAC...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAACATGCATATTGGTTTaGAGACCAAGTCAAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQTCILV*RPSQNQ Trigger: TTGGTTTTGACTTGGTCTCCAAACCAATATGCATGT...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR CCA 72 bp | GCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: AQAGPSTAAPRP*SAGSLLKHSVS Trigger: GCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR CCA 72 bp | TGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTaGCGTGTGCTGTGGAGTTCAGGACCTCCTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: WSAGSLLKHSVS*RVLWSSGPPQN Trigger: GTTTTGAGGAGGTCCTGAACTCCACAGCACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAATGCAGCTCCTCGTCCTaGGTCTGCCGGGAGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQCSSSS*VCREPA Trigger: AGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214644.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGGTTCCCAGTGGGATTTaGGTCTTCATATCAGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: VSPVDLQTGRCTLRHAYWVPSGI*VFISED Trigger: ATCCTCTGATATGAAGACCAAAATCCCACTGGGAAC...CCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR-3UTR CAA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCGTTCCCAGTGGGATTTaGGTCTTCATATCAGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPVPSGI*VFISED Trigger: ATCCTCTGATATGAAGACCAAAATCCCACTGGGAAC...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAGTTCCCAGTGGGATTTaGGTCTTCATATCAGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQVPSGI*VFISED Trigger: ATCCTCTGATATGAAGACCAAAATCCCACTGGGAAC...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAATCTGAGACATGCATATaGGTTTGGAGACCAAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQSETCI*VWRPSQ Trigger: TTGACTTGGTCTCCAAACCAATATGCATGTCTCAGA...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR CCA 72 bp | CTACAGACTGGCAGGTGCACTCTGAGACATGCATATTaGTTTGGAGACCAAGTCAAAACCAAAGCTAATAAT | + |
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Preference number: 3 (lower is better) Translates to: LQTGRCTLRHAY*FGDQVKTKANN Trigger: ATTATTAGCTTTGGTTTTGACTTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR-3UTR CAA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAGTTCCCAGTGGGATTTaGGTCTTCATATCAGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: DDICKYSRVVVINTNAKRVPSGI*VFISED Trigger: ATCCTCTGATATGAAGACCAAAATCCCACTGGGAAC...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| 3UTR-3UTR CAA 90 bp | ATAATCAGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCGACATGCATATTGGTTaGGAGACCAAGTCAAAACCA | + |
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Preference number: 3 (lower is better) Translates to: IISICMIGKYIEFRRQEFDMHIG*ETKSKP Trigger: TGGTTTTGACTTGGTCTCCAAACCAATATGCATGTC...GAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR TCA 72 bp | ACATTGAGTTCCGCAGACAAGAATTCAGAACAATTATaGCCCTGCTCCAGGTTGTCTATTTTTAAAGATGAC | + |
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Preference number: 3 (lower is better) Translates to: TLSSADKNSEQL*PCSRLSIFKDD Trigger: GTCATCTTTAAAAATAGACAACCTGGAGCAGGGTCATAATTGTTCTGAATTCTTGTCTGCGGAACTCAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| 3UTR TCA 72 bp | GCTAATAATCAGTATCTGCATGATTGGGAAATACATTaGGTTCCGCAGACAAGAATTCAGAACAATTATGAC | + |
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Preference number: 3 (lower is better) Translates to: ANNQYLHDWEIH*VPQTRIQNNYD Trigger: GTCATAATTGTTCTGAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTATTAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| CDS-3UTR CCA 90 bp | CAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: QPRRDLALQLLVLGLPGAAFCPA*LRVSCV Trigger: AACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGC...GGCTCCCGGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | CAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCGTCAGCACTGCCTACTaGATCCCCATCTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QPRRDLALQLLVLGLPGAVSTAY*IPISSL Trigger: CAAGGAAGAGATGGGGATGCAGTAGGCAGTGCTGAC...GGCTCCCGGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR TCA 90 bp | CAGCCCAGGCGGGACCTAGCACTGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCCGTGCCAGCTCCTGCTaGAGTTCTGCTTTAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: QPRRDLALQLLVLGLPGARASSC*SSALTH Trigger: ATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACG...GGCTCCCGGCAGACCAAGGACGAGGAGCTGCAGTGCTAGGTCCCGCCTGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: CSSSSLVCREPAEAFCELAFCPA*LRVSCV Trigger: AACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGC...CAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | GCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTCAGCACTGCCTACTaGATCCCCATCTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: APRPWSAGSLLKHSVSWRVSTAY*IPISSL Trigger: CAAGGAAGAGATGGGGATGCAGTAGGCAGTGCTGAC...ACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | TCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTGCTGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSLVCREPAEAFCELACAVVCMS*QLLLKF Trigger: GAACTTCAGCAGGAGCTGGCACGACATGCAGACCAC...AGCACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGTCTTGTACGCAGTCGTaGTCTGCATGTCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSSSSLVCREPAEAFCELSCTQS*SACRAS Trigger: GCTGGCACGACATGCAGACCACGACTGCGTACAAGA...CAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | TCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTGCTTCTTGTACGCAGTCGTaGTCTGCATGTCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSLVCREPAEAFCELACASCTQS*SACRAS Trigger: GCTGGCACGACATGCAGACCACGACTGCGTACAAGA...AGCACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRAFCPA*LRVSCV Trigger: AACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGC...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | TCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTGCTATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSLVCREPAEAFCELACAIESCC*LLPCVA Trigger: AGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAAT...AGCACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | TGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CSSSSLVCREPAEAFCELIESCC*LLPCVA Trigger: AGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAAT...CAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPAAPRP*SAGSLL Trigger: CAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGC...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS-3UTR GCA 90 bp | TCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTTGGCTCAGGGTTTCGTaGGTTTTCTTGTACGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSSLVCREPAEAFCELACWLRVS*VFLYAV Trigger: GACTGCGTACAAGAAAACGCACGAAACCCTGAGCCA...ACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGAGCTGGCGTGTGCTGTaGAGTTCAGGACCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRSWRVL*SSGPPQ Trigger: TTGAGGAGGTCCTGAACTCCACAGCACACGCCAGCT...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS-3UTR TCA 90 bp | TCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTCTCCAAACTTCTTGCTaGTGGCAGTTCCCACGTTAT | + |
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Preference number: 4 (lower is better) Translates to: SSSLVCREPAEAFCELACLQTSC*WQFPRY Trigger: ATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAG...ACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGCTCCAAACTTCTTGCTaGTGGCAGTTCCCACGTTAT | + |
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Preference number: 4 (lower is better) Translates to: CSSSSLVCREPAEAFCELLQTSC*WQFPRY Trigger: ATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAG...CAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRIESCC*LLPCVA Trigger: AGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAAT...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPAFCPA*LRVSCV Trigger: AACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGC...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAGTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCGCAGCTCCTCGTCCTTaGTCTGCCGGGAGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: INSVTCRSTDWQVHSETCAAPRP*SAGSLL Trigger: CAGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGC...GCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACACTATTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000305.7 |
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| CDS-3UTR TCA 90 bp | GCTCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTTGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: APRPWSAGSLLKHSVSWRCRVSV*SQPDVF Trigger: AAAGACATCTGGTTGAGATCAAACAGAAACTCGGCA...ACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR TCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGCGTGCCAGCTCCTGCTaGAGTTCTGCTTTAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRRASSC*SSALTH Trigger: ATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACG...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGTGGCTCAGGGTTTCGTaGGTTTTCTTGTACGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRWLRVS*VFLYAV Trigger: GACTGCGTACAAGAAAACGCACGAAACCCTGAGCCA...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTTGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVCREPAEAFCELACCRVSV*SQPDVF Trigger: AAAGACATCTGGTTGAGATCAAACAGAAACTCGGCA...ACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGCAGTTCCCACGTTATTaGAAGCTGCTGTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRQFPRY*KLLLPS Trigger: AGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTG...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGCACCTACTTTCGTCTTaGGGCTTGCAACAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRHLLSS*GLQQLS Trigger: AGACAACTGTTGCAAGCCTCAAGACGAAAGTAGGTG...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPVVCMS*QLLLKF Trigger: GAACTTCAGCAGGAGCTGGCACGACATGCAGACCAC...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR CCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCTCTTGTACGCAGTCGTaGTCTGCATGTCGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPSCTQS*SACRAS Trigger: GCTGGCACGACATGCAGACCACGACTGCGTACAAGA...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR CCA 90 bp | ATCACAAGCAATTTGGTGAAGTTTGTAGGATTTGCGCCCTGCTGGAGACCGTCAGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITSNLVKFVGFAPCWRPSAFCPA*LRVSCV Trigger: AACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGC...TGACGGTCTCCAGCAGGGCGCAAATCCTACAAACTTCACCAAATTGCTTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | TCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTGCTCTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVCREPAEAFCELACALVVML*FRLLAE Trigger: TTCAGCTAGAAGACGAAATCACAACATTACGACAAG...AGCACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCGTCAGCACTGCCTACTaGATCCCCATCTCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPVSTAY*IPISSL Trigger: CAAGGAAGAGATGGGGATGCAGTAGGCAGTGCTGAC...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPIESCC*LLPCVA Trigger: AGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAAT...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGTTTCGTCTTGAGGCTTaGAACAGTTGTCTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRFRLEA*NSCLNP Trigger: AGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAA...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGTGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRCRVSV*SQPDVF Trigger: AAAGACATCTGGTTGAGATCAAACAGAAACTCGGCA...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCCGTGCCAGCTCCTGCTaGAGTTCTGCTTTAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPRASSC*SSALTH Trigger: ATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACG...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQVVCMS*QLLLKF Trigger: GAACTTCAGCAGGAGCTGGCACGACATGCAGACCAC...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCTGGCTCAGGGTTTCGTaGGTTTTCTTGTACGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPWLRVS*VFLYAV Trigger: GACTGCGTACAAGAAAACGCACGAAACCCTGAGCCA...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR CCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAAGCTGGCGTGTGCTGTaGAGTTCAGGACCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQSWRVL*SSGPPQ Trigger: TTGAGGAGGTCCTGAACTCCACAGCACACGCCAGCT...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000305.7 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGCTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRLVVML*FRLLAE Trigger: TTCAGCTAGAAGACGAAATCACAACATTACGACAAG...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCCAGTTCCCACGTTATTaGAAGCTGCTGTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPQFPRY*KLLLPS Trigger: AGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTG...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCCTCCAAACTTCTTGCTaGTGGCAGTTCCCACGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPLQTSC*WQFPRY Trigger: ATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAG...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCCACCTACTTTCGTCTTaGGGCTTGCAACAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPHLLSS*GLQQLS Trigger: AGACAACTGTTGCAAGCCTCAAGACGAAAGTAGGTG...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS-3UTR GCA 90 bp | ATAGTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSPVDLQTGRCTLRHAYIESCC*LLPCVA Trigger: AGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAAT...ATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | ATAAATAGTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCCGTGCCAGCTCCTGCTaGAGTTCTGCTTTAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: INSVTCRSTDWQVHSETCRASSC*SSALTH Trigger: ATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACG...GCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACACTATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| CDS-3UTR GCA 90 bp | ATAGTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGCTCAGGGTTTCGTaGGTTTTCTTGTACGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVSPVDLQTGRCTLRHAYWLRVS*VFLYAV Trigger: GACTGCGTACAAGAAAACGCACGAAACCCTGAGCCA...ATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCTTTCGTCTTGAGGCTTaGAACAGTTGTCTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPFRLEA*NSCLNP Trigger: AGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAA...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
||
| CDS-3UTR CCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAAAAGCATTCTGTGAGCTaGCGTGTGCTGTGGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQKHSVS*RVLWSS Trigger: TGAACTCCACAGCACACGCCAGCTCACAGAATGCTT...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000305.7 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCTGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPCRVSV*SQPDVF Trigger: AAAGACATCTGGTTGAGATCAAACAGAAACTCGGCA...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAAGCAATTTGGTGAAGTTTGTAGGATTTGCGCCCTGCTGGAGACCGTCACAGTTCCCACGTTATTaGAAGCTGCTGTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSNLVKFVGFAPCWRPSQFPRY*KLLLPS Trigger: AGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTG...TGACGGTCTCCAGCAGGGCGCAAATCCTACAAACTTCACCAAATTGCTTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAAGCAATTTGGTGAAGTTTGTAGGATTTGCGCCCTGCTGGAGACCGTCACTCCAAACTTCTTGCTaGTGGCAGTTCCCACGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ITSNLVKFVGFAPCWRPSLQTSC*WQFPRY Trigger: ATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAG...TGACGGTCTCCAGCAGGGCGCAAATCCTACAAACTTCACCAAATTGCTTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | TCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTCACCTACTTTCGTCTTaGGGCTTGCAACAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVDLQTGRCTLRHAYWFHLLSS*GLQQLS Trigger: AGACAACTGTTGCAAGCCTCAAGACGAAAGTAGGTG...AAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000305.7 |
||
| CDS-3UTR TCA 90 bp | GTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGCTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPVDLQTGRCTLRHAYWLVVML*FRLLAE Trigger: TTCAGCTAGAAGACGAAATCACAACATTACGACAAG...CCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCCTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPLVVML*FRLLAE Trigger: TTCAGCTAGAAGACGAAATCACAACATTACGACAAG...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCACCTGTCGATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGCTCCTGCTGAAGTTCTaGTTTAACTCATTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPVDLQTGRCTLRHAYWLLLKF*FNSFIR Trigger: TCTGATGAATGAGTTAAAGCAGAACTTCAGCAGGAG...CCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATCGACAGGTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | GATCTACAGACTGGCAGGTGCACTCTGAGACATGCATATTGGTTTGGAGACCAATGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLQTGRCTLRHAYWFGDQCRVSV*SQPDVF Trigger: AAAGACATCTGGTTGAGATCAAACAGAAACTCGGCA...TTGGTCTCCAAACCAATATGCATGTCTCAGAGTGCACCTGCCAGTCTGTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR CCA 90 bp | ATAATCAGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCTCTTGTACGCAGTCGTaGTCTGCATGTCGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IISICMIGKYIEFRRQEFSCTQS*SACRAS Trigger: GCTGGCACGACATGCAGACCACGACTGCGTACAAGA...GAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR GCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRVVCMS*QLLLKF Trigger: GAACTTCAGCAGGAGCTGGCACGACATGCAGACCAC...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR CCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGATCTTGTACGCAGTCGTaGTCTGCATGTCGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRSCTQS*SACRAS Trigger: GCTGGCACGACATGCAGACCACGACTGCGTACAAGA...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR GCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAGTCAGCACTGCCTACTaGATCCCCATCTCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRVSTAY*IPISSL Trigger: CAAGGAAGAGATGGGGATGCAGTAGGCAGTGCTGAC...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | ATAATCAGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCCAGTTCCCACGTTATTaGAAGCTGCTGTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IISICMIGKYIEFRRQEFQFPRY*KLLLPS Trigger: AGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTG...GAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR CCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAAAGCATTCTGTGAGCTaGCGTGTGCTGTGGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRKHSVS*RVLWSS Trigger: TGAACTCCACAGCACACGCCAGCTCACAGAATGCTT...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
||
| CDS-3UTR TCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGACAGTTCCCACGTTATTaGAAGCTGCTGTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRQFPRY*KLLLPS Trigger: AGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTG...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
||
| CDS-3UTR TCA 90 bp | AGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCAGAACACTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SICMIGKYIEFRRQEFRTLVVML*FRLLAE Trigger: TTCAGCTAGAAGACGAAATCACAACATTACGACAAG...TGTTCTGAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
||
| CDS-3UTR TCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAGAGTACCCAAAAGAGTaGGACCTCATATCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKREYPKE*DLISPN Trigger: GTTTGGAGATATGAGGTCTCACTCTTTTGGGTACTC...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213528.2 |
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| CDS-3UTR GCA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGATTTCGTCTTGAGGCTTaGAACAGTTGTCTCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: DDICKYSRVVVINTNAKRFRLEA*NSCLNP Trigger: AGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAA...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS-3UTR CAA 90 bp | GGATTTTGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCTGCAGCTCCTCGTCCTaGGTCTGCCGGGAGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GFWSSYQRMSRQIDQQQPCSSSS*VCREPA Trigger: AGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA...GGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCAAAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS CCA 90 bp | GCAGTTCCCACGTTATTGAAAGCTGCTGTTGCCTTCTGCCCTGCGTaGCTCAGGGTTTCGTGCGTTTTCTTGTACGCAGTCGTGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: AVPTLLKAAVAFCPA*LRVSCVFLYAVVVC Trigger: GCAGACCACGACTGCGTACAAGAAAACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CAA 90 bp | TCCTCGTCCTTGGTCTGCCGGGAGCCTGCTGAAGCATTCTGTGAGCTGGCGTGTATGCCGAGTTTCTGTTaGATCTCAACCAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSSLVCREPAEAFCELACMPSFC*ISTRCL Trigger: AAGACATCTGGTTGAGATCAAACAGAAACTCGGCAT...ACACGCCAGCTCACAGAATGCTTCAGCAGGCTCCCGGCAGACCAAGGACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTTCATATCAGAGGATGAGCAGGCAGATTGACCAGCAGCAGCCCAGGCGGATATCTCCAAACTTCTaGCTGATGGCAGTTCCCACG | + |
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Preference number: 5 (lower is better) Translates to: WSSYQRMSRQIDQQQPRRISPNF*LMAVPT Trigger: CGTGGGAACTGCCATCAGCAAGAAGTTTGGAGATAT...CCGCCTGGGCTGCTGCTGGTCAATCTGCCTGCTCATCCTCTGATATGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS GCA 90 bp | AGGGTTTCGTGCGTTTTCTTGTACGCAGTCGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTCTGCTTTAACTCATTCATCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: RVSCVFLYAVVVCMS*QLLLKFCFNSFIRF Trigger: GAATCTGATGAATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACGACATGCAGACCACGACTGCGTACAAGAAAACGCACGAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CAA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGATGCAGCTCCTCGTCCTaGGTCTGCCGGGAGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: DDICKYSRVVVINTNAKRCSSSS*VCREPA Trigger: AGCAGGCTCCCGGCAGACCAAGGACGAGGAGCTGCA...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS TCA 90 bp | TTTCGTCTTGAGGCTTGCAACAGTTGTCTCAACCCTCTCCTCAAATaGTTTGAAAGTAGAAGAATTCCTCATGGCAGGCATACTTATGGA | + |
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Preference number: 5 (lower is better) Translates to: FRLEACNSCLNPLLK*FESRRIPHGRHTYG Trigger: TCCATAAGTATGCCTGCCATGAGGAATTCTTCTACTTTCAAATCATTTGAGGAGAGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 |
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| CDS-3UTR CAA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAATATCTCCAAACTTCTaGCTGATGGCAGTTCCCACG | + |
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Preference number: 5 (lower is better) Translates to: DDICKYSRVVVINTNAKRISPNF*LMAVPT Trigger: CGTGGGAACTGCCATCAGCAAGAAGTTTGGAGATAT...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS TCA 90 bp | CAACCAGATGTCTTTCTTTTGCTGACAAAACTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAATTAACTCTGCCTTTAGCTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: QPDVFLLLTKLVVML*FRLLAELTLPLALP Trigger: AGGAAGAGCTAAAGGCAGAGTTAATTCAGCTAGAAGACGAAATCACAACATTACGACAAGTTTTGTCAGCAAAAGAAAGACATCTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CAA 90 bp | ATAATCAGTATCTGCATGATTGGGAAATACATTGAGTTCCGCAGACAAGAATTCATGCCGAGTTTCTGTTaGATCTCAACCAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: IISICMIGKYIEFRRQEFMPSFC*ISTRCL Trigger: AAGACATCTGGTTGAGATCAAACAGAAACTCGGCAT...GAATTCTTGTCTGCGGAACTCAATGTATTTCCCAATCATGCAGATACTGATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000214644.2 |
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| CDS TCA 90 bp | AGTTCTGCTTTAACTCATTCATCAGATTCATGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTTCTTTTGCTGACAAAACTTGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: SSALTHSSDSCRVSV*SQPDVFLLLTKLVV Trigger: TACGACAAGTTTTGTCAGCAAAAGAAAGACATCTGGTTGAGATCAAACAGAAACTCGGCATGAATCTGATGAATGAGTTAAAGCAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS-3UTR CAA 90 bp | GATGACATTTGTAAATACTCCAGAGTAGTGGTCATCAACACAAATGCAAAAAGAATGCCGAGTTTCTGTTaGATCTCAACCAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DDICKYSRVVVINTNAKRMPSFC*ISTRCL Trigger: AAGACATCTGGTTGAGATCAAACAGAAACTCGGCAT...TCTTTTTGCATTTGTGTTGATGACCACTACTCTGGAGTATTTACAAATGTCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS GCA 72 bp | GCTGTTGCCTTCTGCCCTGCGTGGCTCAGGGTTTCGTaGGTTTTCTTGTACGCAGTCGTGGTCTGCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: AVAFCPAWLRVS*VFLYAVVVCMS Trigger: CGACATGCAGACCACGACTGCGTACAAGAAAACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGCAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS GCA 72 bp | GCTGATGGCAGTTCCCACGTTATTGAAAGCTGCTGTTaGCTTCTGCCCTGCGTGGCTCAGGGTTTCGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: ADGSSHVIESCC*LLPCVAQGFVR Trigger: ACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTGCCATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS GCA 72 bp | GCAGTTCCCACGTTATTGAAAGCTGCTGTTGCCTTCTaGCCTGCGTGGCTCAGGGTTTCGTGCGTTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AVPTLLKAAVAF*PAWLRVSCVFL Trigger: CAAGAAAACGCACGAAACCCTGAGCCACGCAGGGCAGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS CAA 72 bp | CTGCCACCACCGTGGTTTGTCCCACCTACTTTCGTCTaGAGGCTTGCAACAGTTGTCTCAACCCTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LPPPWFVPPTFV*RLATVVSTLSS Trigger: TGAGGAGAGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAAGTAGGTGGGACAAACCACGGTGGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS TCA 72 bp | TGCCACCACCGTGGTTTGTCCCACCTACTTTCGTCTTaGGGCTTGCAACAGTTGTCTCAACCCTCTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: CHHRGLSHLLSS*GLQQLSQPSPQ Trigger: TTGAGGAGAGGGTTGAGACAACTGTTGCAAGCCTCAAGACGAAAGTAGGTGGGACAAACCACGGTGGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 |
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| CDS GCA 72 bp | AGGGTTTCGTGCGTTTTCTTGTACGCAGTCGTGGTCTaGATGTCGTGCCAGCTCCTGCTGAAGTTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVSCVFLYAVVV*MSCQLLLKFCF Trigger: AAAGCAGAACTTCAGCAGGAGCTGGCACGACATGCAGACCACGACTGCGTACAAGAAAACGCACGAAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS GCA 72 bp | TGCGTTTTCTTGTACGCAGTCGTGGTCTGCATGTCGTaGCAGCTCCTGCTGAAGTTCTGCTTTAACTCATTC | + |
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Preference number: 6 (lower is better) Translates to: CVFLYAVVVCMS*QLLLKFCFNSF Trigger: GAATGAGTTAAAGCAGAACTTCAGCAGGAGCTGGCACGACATGCAGACCACGACTGCGTACAAGAAAACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS CAA 72 bp | GAATGGCGGATGGAGTACCTCATATCTCCAAACTTCTaGCTGATGGCAGTTCCCACGTTATTGAAAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: EWRMEYLISPNF*LMAVPTLLKAA Trigger: AGCAGCTTTCAATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAGATATGAGGTACTCCATCCGCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000215515.2 |
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| CDS TCA 72 bp | GAGGCTTGCAACAGTTGTCTCAACCCTCTCCTCAAATaGTTTGAAAGTAGAAGAATTCCTCATGGCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: EACNSCLNPLLK*FESRRIPHGRH Trigger: ATGCCTGCCATGAGGAATTCTTCTACTTTCAAATCATTTGAGGAGAGGGTTGAGACAACTGTTGCAAGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 |
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| CDS TCA 72 bp | AAAACTTGTCGTAATGTTGTGATTTCGTCTTCTAGCTaGATTAACTCTGCCTTTAGCTCTTCCTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KTCRNVVISSSS*INSAFSSSFSS Trigger: GGAGGAGAAGGAAGAGCTAAAGGCAGAGTTAATTCAGCTAGAAGACGAAATCACAACATTACGACAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS TCA 72 bp | GAGGCTTGCAACAGTTGTCTCAACCCTCTCCTCAAATaGTTTGAAAGTAGAAGAATTCCTCATATCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: EACNSCLNPLLK*FESRRIPHISK Trigger: TTTGGAGATATGAGGAATTCTTCTACTTTCAAATCATTTGAGGAGAGGGTTGAGACAACTGTTGCAAGCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213639.2 |
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| CDS CAA 72 bp | TTGAAAGTAGAAGAATTCCTCATATCTCCAAACTTCTaGCTGATGGCAGTTCCCACGTTATTGAAAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LKVEEFLISPNF*LMAVPTLLKAA Trigger: AGCAGCTTTCAATAACGTGGGAACTGCCATCAGCAAGAAGTTTGGAGATATGAGGAATTCTTCTACTTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213639.2 |
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| CDS CAA 90 bp | AAGTTCTGCTTTAACTCATTCATCAGATTCATGCCGAGTTTCTGTTaGATCTCAACCAGATGTCTTTCTTTTGCTGACAAAACTTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: KFCFNSFIRFMPSFC*ISTRCLSFADKTCR Trigger: ACGACAAGTTTTGTCAGCAAAAGAAAGACATCTGGTTGAGATCAAACAGAAACTCGGCATGAATCTGATGAATGAGTTAAAGCAGAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS TCA 72 bp | GTCTTTCTTTTGCTGACAAAACTTGTCGTAATGTTGTaGTTTCGTCTTCTAGCTGAATTAACTCTGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: VFLLLTKLVVML*FRLLAELTLPL Trigger: TAAAGGCAGAGTTAATTCAGCTAGAAGACGAAATCACAACATTACGACAAGTTTTGTCAGCAAAAGAAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS TCA 72 bp | TTAACTCATTCATCAGATTCATGCCGAGTTTCTGTTTaGTCTCAACCAGATGTCTTTCTTTTGCTGACAAAA | + |
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Preference number: 6 (lower is better) Translates to: LTHSSDSCRVSV*SQPDVFLLLTK Trigger: TTTTGTCAGCAAAAGAAAGACATCTGGTTGAGATCAAACAGAAACTCGGCATGAATCTGATGAATGAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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| CDS CAA 72 bp | TTTAACTCATTCATCAGATTCATGCCGAGTTTCTGTTaGATCTCAACCAGATGTCTTTCTTTTGCTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: FNSFIRFMPSFC*ISTRCLSFADK Trigger: TTTGTCAGCAAAAGAAAGACATCTGGTTGAGATCAAACAGAAACTCGGCATGAATCTGATGAATGAGTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000305.7 ENSMUST00000213528.2 ENSMUST00000213639.2 ENSMUST00000214644.2 ENSMUST00000215515.2 |
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