Pregenerated sensors for TPD52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027506Ensembl transcript IDs: ENSMUST00000063496.14, ENSMUST00000091354.12, ENSMUST00000091355.12, ENSMUST00000094381.11, ENSMUST00000120143.8, ENSMUST00000121038.8, ENSMUST00000124956.2, ENSMUST00000134788.8, ENSMUST00000145905.8, ENSMUST00000155450.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGCACTGCTTTTAGAAAGGCCTCGGAGCTCTTCCATCACCGTTTaGGTCCTCACACAGCTGAGATTTCCCAGGAAACCCACGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GALLLERPRSSSITV*VLTQLRFPRKPTLP Trigger: GGGAAGCGTGGGTTTCCTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGCCTTTCTAAAAGCAGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | TGGATTTCTTCTTCCACCTTAGTAAGCTCCCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCCTCTGGAGCACTGAGCATGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: WISSSTLVSSRLSSS*SSSVSASGALSMVT Trigger: TGTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCGGGAGCTTACTAAGGTGGAAGAAGAAATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155450.2 |
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| 3UTR CCA 90 bp | ACAACTGGTCCAAGTTGCACAGCCTGTGGAGAGCTCCACCACAAATaGCCACAAATCCACATCACCACTCCATCATCCCAAGGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TTGPSCTACGELHHK*PQIHITTPSSQGSG Trigger: CCCTGAGCCTTGGGATGATGGAGTGGTGATGTGGATTTGTGGCCATTTGTGGTGGAGCTCTCCACAGGCTGTGCAACTTGGACCAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | TGTGAGGGTGTGCGTCAGCACACATGGAGGCCATCTGATGTTGCCTaGCTTCTTTCTATGAGGATCCAGGTCTTCCTGCTTGCATGGCAA | + |
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Preference number: 1 (lower is better) Translates to: CEGVRQHTWRPSDVA*LLSMRIQVFLLAWQ Trigger: TTGCCATGCAAGCAGGAAGACCTGGATCCTCATAGAAAGAAGGCAGGCAACATCAGATGGCCTCCATGTGTGCTGACGCACACCCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR CCA 90 bp | GACACCTCCCCTCAAGCTGATGGTCAGGGTTTTCCTGGAGACACCTaGCACAATACAGACAACTGTCCCTGCACTTGTTTGCATATCAGG | + |
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Preference number: 1 (lower is better) Translates to: DTSPQADGQGFPGDT*HNTDNCPCTCLHIR Trigger: CCTGATATGCAAACAAGTGCAGGGACAGTTGTCTGTATTGTGCCAGGTGTCTCCAGGAAAACCCTGACCATCAGCTTGAGGGGAGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR CCA 90 bp | CCTTTGCAACTGCCGGTCGGCTGGATGGATGGATGGATGGATGGGTaGGTGGCTGAGTTTGTAGCTTTACTTTGCTGTTTTACATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: PLQLPVGWMDGWMDG*VAEFVALLCCFTCQ Trigger: CTGACATGTAAAACAGCAAAGTAAAGCTACAAACTCAGCCACCCACCCATCCATCCATCCATCCATCCAGCCGACCGGCAGTTGCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | ACTGCCGGTCGGCTGGATGGATGGATGGATGGATGGGTGGGTGGCTaGGTTTGTAGCTTTACTTTGCTGTTTTACATGTCAGCATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: TAGRLDGWMDGWVGG*VCSFTLLFYMSASE Trigger: TTCAGATGCTGACATGTAAAACAGCAAAGTAAAGCTACAAACTCAGCCACCCACCCATCCATCCATCCATCCATCCAGCCGACCGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | CCAAACTCAGCAACATCACAATTACACAAAGGAGTTGGTAGGAGCTaGGTCACCAGTCCACTGGAGTGTGAAGCCCTGGTACATGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PNSATSQLHKGVGRS*VTSPLECEALVHAE Trigger: CTCAGCATGTACCAGGGCTTCACACTCCAGTGGACTGGTGACTCAGCTCCTACCAACTCCTTTGTGTAATTGTGATGTTGCTGAGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR CCA 90 bp | TGCAGGACTCTTGCCTACACAGGCACCAATGGGCATGGGCTCTATTaGCAATACTGCTGCTCCATGCATCTTCCCACTAGCTCTATTAAA | + |
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Preference number: 1 (lower is better) Translates to: CRTLAYTGTNGHGLY*QYCCSMHLPTSSIK Trigger: TTTAATAGAGCTAGTGGGAAGATGCATGGAGCAGCAGTATTGCCAATAGAGCCCATGCCCATTGGTGCCTGTGTAGGCAAGAGTCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | ATAAAACCAAGTGAGTCAACAAGAGGGATGAGTCTGCAGGACTCTTaGCTACACAGGCACCAATGGGCATGGGCTCTATTGGCAATACTG | + |
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Preference number: 1 (lower is better) Translates to: IKPSESTRGMSLQDS*LHRHQWAWALLAIL Trigger: CAGTATTGCCAATAGAGCCCATGCCCATTGGTGCCTGTGTAGGCAAGAGTCCTGCAGACTCATCCCTCTTGTTGACTCACTTGGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | GTGGGAACGATTTCTACATACAGAACAGCTCAGGCACTAACACACTaGGAACAGAAACTGCCTGATCAGCTCAGTCATAGTAACGCCTCG | + |
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Preference number: 1 (lower is better) Translates to: VGTISTYRTAQALTH*EQKLPDQLSHSNAS Trigger: CGAGGCGTTACTATGACTGAGCTGATCAGGCAGTTTCTGTTCTCAGTGTGTTAGTGCCTGAGCTGTTCTGTATGTAGAAATCGTTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | CCATTGCATCCGAGCAGCAACCAGGAATGGCAGCATGTCATTTTGTaGCAACCGACACTGTGGCTTTTCAATTCTGGTTTGCAGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: PLHPSSNQEWQHVIL*QPTLWLFNSGLQKP Trigger: AGGTTTCTGCAAACCAGAATTGAAAAGCCACAGTGTCGGTTGTCACAAAATGACATGCTGCCATTCCTGGTTGCTGCTCGGATGCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | TGCAATGACAGGATCCCTACAATCATGAACTCTCAGCAGCTGTGTTaGCTGAGTGGGACCTGCCAGATCAAGACAATCGAGCTTCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: CNDRIPTIMNSQQLC*LSGTCQIKTIELLN Trigger: ATTTAGAAGCTCGATTGTCTTGATCTGGCAGGTCCCACTCAGGCAACACAGCTGCTGAGAGTTCATGATTGTAGGGATCCTGTCATTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | ATGAGGATCCAGGTCTTCCTGCTTGCATGGCAAATACTTTACCACTaGATCATCTGCCCAGTCCTGACGCTGAGACTCTTAAAGGTCATA | + |
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Preference number: 1 (lower is better) Translates to: MRIQVFLLAWQILYH*IICPVLTLRLLKVI Trigger: TATGACCTTTAAGAGTCTCAGCGTCAGGACTGGGCAGATGATTCAGTGGTAAAGTATTTGCCATGCAAGCAGGAAGACCTGGATCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | GGCAAGAGCAGGACCCACACTCTCCCCACTGGAAGTTTGAGTGTCTaGATGTTTTTAATTTACAGAACTATAGAACTGCATACACACCTG | + |
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Preference number: 1 (lower is better) Translates to: GKSRTHTLPTGSLSV*MFLIYRTIELHTHL Trigger: CAGGTGTGTATGCAGTTCTATAGTTCTGTAAATTAAAAACATGCAGACACTCAAACTTCCAGTGGGGAGAGTGTGGGTCCTGCTCTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | TGGCTCATCAGTTCAAAGTCCATAATATTACTCTTAGAGAATGAATaGCCAGGTTCAGTTCCCACATGCACATCTGACTGTACGCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: WLISSKSIILLLENE*PGSVPTCTSDCTPS Trigger: GCTGGGCGTACAGTCAGATGTGCATGTGGGAACTGAACCTGGGCATTCATTCTCTAAGAGTAATATTATGGACTTTGAACTGATGAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR GCA 90 bp | CAGGCACCAATGGGCATGGGCTCTATTGGCAATACTGCTGCTCCATaGATCTTCCCACTAGCTCTATTAAAATACTTCCAAGTTATTAAT | + |
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Preference number: 1 (lower is better) Translates to: QAPMGMGSIGNTAAP*IFPLALLKYFQVIN Trigger: ATTAATAACTTGGAAGTATTTTAATAGAGCTAGTGGGAAGATGCATGGAGCAGCAGTATTGCCAATAGAGCCCATGCCCATTGGTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | CTAGATGAAGTGTGGGAAGAGTTTCTTCCACACTCATCCCTGGTCTaGTCTATGTACATTCCTTCTCCTTCTCTCCACTTAATCATTTTC | + |
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Preference number: 1 (lower is better) Translates to: LDEVWEEFLPHSSLV*SMYIPSPSLHLIIF Trigger: GAAAATGATTAAGTGGAGAGAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCTTCCCACACTTCATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR CCA 90 bp | CTATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTaGAGGTCAAGTGATTTCACTTTGTTTCATTCATCAACTATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LYKGPSMHANSVSLE*RSSDFTLFHSSTIW Trigger: CCAAATAGTTGATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| 3UTR CCA 90 bp | AGGCCTACTCCACAGGAGATGGAACCAATCCAGTTACTGCAGATCTaGCCAAAAACTATGATTTTGCTAAACAGATATACTATCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RPTPQEMEPIQLLQI*PKTMILLNRYTIKL Trigger: CAGCTTGATAGTATATCTGTTTAGCAAAATCATAGTTTTTGGCCAGATCTGCAGTAACTGGATTGGTTCCATCTCCTGTGGAGTAGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR TCA 90 bp | GTTCAAATTAAACTTTTCTGTATTCCAAGAATTGTGTGTAGTGGCTaGAATCCGAGTGCTGGTGATAAGTTCTTTTATTCACTTCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VQIKLFCIPRIVCSG*NPSAGDKFFYSLLR Trigger: CCTGAGAAGTGAATAAAAGAACTTATCACCAGCACTCGGATTTCAGCCACTACACACAATTCTTGGAATACAGAAAAGTTTAATTTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR CAA 90 bp | CACATCTGGTGGAAATCCGCAGCCATGAGCGTTGTCAAGATGTACTaGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: HIWWKSAAMSVVKMY*ALAGSTWQWAAGHR Trigger: CCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATGGCTGCGGATTTCCACCAGATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
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| 3UTR CAA 90 bp | TTCAAAGCCCTGATGGCATCAATCGACCTGGCCTCATCTACCAAGTaGTGGCATCAACAGCACTACACGCACCACACCCCAGCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: FKALMASIDLASSTK*WHQQHYTHHTPAHP Trigger: GGGGTGGGCTGGGGTGTGGTGCGTGTAGTGCTGTTGATGCCACAACTTGGTAGATGAGGCCAGGTCGATTGATGCCATCAGGGCTTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGCCTTGGCAGCACCTGGCAGTaGGCAGCAGGACACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: PAGIYQRLYDAVSYTKGLGSTWQ*AAGHRS Trigger: CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCC...AAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | TATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAACTCGCCGGCAGCACCTaGCAGTGGGCAGCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: YTKGLPCMLTVFPWSGGQLAGST*QWAAGH Trigger: GTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAG...TTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| 3UTR CAA 90 bp | GGGAGCACTGCTTTTAGAAAGGCCTCGGAGCTCTTCCATCACCGTTaGCGTCCTCACACAGCTGAGATTTCCCAGGAAACCCACGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GSTAFRKASELFHHR*RPHTAEISQETHAS Trigger: GGAAGCGTGGGTTTCCTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGCCTTTCTAAAAGCAGTGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCATGTGTGTGAGGGTGTGCGTCAGCACACATGGAGGCCATCTGATGTTGAGCTCTGGGACACCCTaGCGTCTCTGCTCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: MFMCVRVCVSTHGGHLMLSSGTP*RLCSPQ Trigger: CTGTGGAGAGCAGAGACGTCAGGGTGTCCCAGAGCT...CAACATCAGATGGCCTCCATGTGTGCTGACGCACACCCTCACACACATGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAACCAGGAATGGCAGCATGTCATTTTGTGACAACCGACACTGTGGCTTTGCCACTGGGAAGCTTTaGCTCACAGCCCCGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: AATRNGSMSFCDNRHCGFATGKL*LTAPTV Trigger: AACTGTCGGGGCTGTGAGTCAAAGCTTCCCAGTGGC...AAAGCCACAGTGTCGGTTGTCACAAAATGACATGCTGCCATTCCTGGTTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR CAA 90 bp | CTCTGGCAGATGGAGGTAGGATGGTCAGGGCTTCAAGGTCACCCTTaGCTACATAGCAAGATGGACAGCTTGAACTGTGTGAGACTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LWQMEVGWSGLQGHP*LHSKMDSLNCVRLP Trigger: AGGCAGTCTCACACAGTTCAAGCTGTCCATCTTGCTATGTAGCAAAGGGTGACCTTGAAGCCCTGACCATCCTACCTCCATCTGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCGGAGCTCTTCCATCACCGTTTGCGTCCTCACACAGCTGAGATTTCCCAGGGAGTGGAGGTCAAGTaGTTTCACTTTGTTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: ASELFHHRLRPHTAEISQGVEVK*FHFVSF Trigger: GAATGAAACAAAGTGAAATCACTTGACCTCCACTCC...CTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCAAGGCAAGAGCAGGACCCACACTCTCCCCACTGGAAGTTTGAGTGTCTGGAGAAACACAGTAGTTaGCTGCAGGGATCTACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LPRQEQDPHSPHWKFECLEKHSS*LQGSTR Trigger: TCTGGTAGATCCCTGCAGGCAACTACTGTGTTTCTC...CAGACACTCAAACTTCCAGTGGGGAGAGTGTGGGTCCTGCTCTTGCCTTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGGAGCTCTTCCATCACCGTTTGCGTCCTCACACAGCTGAGATTTCCCAGCAGCCCCAACCTTTCTaGTACATTTCTGTTAATAGC | + |
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Preference number: 2 (lower is better) Translates to: ASELFHHRLRPHTAEISQQPQPF*YISVNS Trigger: GCTATTAACAGAAATGTAGCAGAAAGGTTGGGGCTG...CTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTCCATGCATCTTCCCACTAGCTCTATTAAAATACTTCCAAGTTATTCTCGCCGGCAGCACCTaGCAGTGGGCAGCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TAAPCIFPLALLKYFQVILAGST*QWAAGH Trigger: GTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAG...AATAACTTGGAAGTATTTTAATAGAGCTAGTGGGAAGATGCATGGAGCAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCCTGGAGTGGAGGTCAAGTGATTTCACTTTGTTTCATTCATCAACTATTGGCAGCACCTGGCAGTaGGCAGCAGGACACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: VSLEWRSSDFTLFHSSTIGSTWQ*AAGHRS Trigger: CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCC...AATAGTTGATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | AACTATAGAACTGCATACACACCTGTCTACTTTAGTCTGGTGTCTTTAGAAACCGGCAGCACCTGGCAGTaGGCAGCAGGACACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: NYRTAYTPVYFSLVSLETGSTWQ*AAGHRS Trigger: CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCC...GGTTTCTAAAGACACCAGACTAAAGTAGACAGGTGTGTATGCAGTTCTATAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR CAA 90 bp | AAAAGGAAACAATCTAAAGAATGCAGGATCCTGACGTTTGCACGGTaGCTGTGTCCCCTCGCACACTCTCGCTTCTACCTTTGCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: KRKQSKECRILTFAR*LCPLAHSRFYLCNC Trigger: GCAGTTGCAAAGGTAGAAGCGAGAGTGTGCGAGGGGACACAGCAACCGTGCAAACGTCAGGATCCTGCATTCTTTAGATTGTTTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAACCAGGAATGGCAGCATGTCATTTTGTGACAACCGACACTGTGGCTTTACAAAGGGCCTTCCATaGATGCTAACAGTGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: AATRNGSMSFCDNRHCGFTKGLP*MLTVFP Trigger: GGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGT...AAAGCCACAGTGTCGGTTGTCACAAAATGACATGCTGCCATTCCTGGTTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTCTTCCACACTCATCCCTGGTCTGATCTATGTACATTCCTTCTCCTTCCAAAGGAAGCAGGAGTaGGTCAGGAGTGACCACAGT | + |
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Preference number: 2 (lower is better) Translates to: RVSSTLIPGLIYVHSFSFQRKQE*VRSDHS Trigger: ACTGTGGTCACTCCTGACTCACTCCTGCTTCCTTTG...GAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGGAGTGGAGGTCAAGTaGTTTCACTTTGTTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: SCLQGSTRGSMMLFPIQRGVEVK*FHFVSF Trigger: GAATGAAACAAAGTGAAATCACTTGACCTCCACTCC...CCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGGCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTATACATTCTGGTCACAGACTATGAAGAAACCAAGTTGGCCCACAAAACTAGTCAACAAGAGGGATaGGTCTGCAGGACTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: TLYILVTDYEETKLAHKTSQQEG*VCRTLA Trigger: GGCAAGAGTCCTGCAGACTCATCCCTCTTGTTGACT...AGTTTTGTGGGCCAACTTGGTTTCTTCATAGTCTGTGACCAGAATGTATAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR CAA 90 bp | GAATTTCTTTATACAGTGGATTGTGCTCATCTGAGAAGCCATAGGTaGTCAATAAAAAGCCTAACACCAGGTTTGGGACACCTCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: EFLYTVDCAHLRSHR*SIKSLTPGLGHLPS Trigger: TGAGGGGAGGTGTCCCAAACCTGGTGTTAGGCTTTTTATTGACAACCTATGGCTTCTCAGATGAGCACAATCCACTGTATAAAGAAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGAAAAAGGCTTTAGGTCACTCCAAGCTTGGCAGTTAACATTTGGCATGGGAGTGGAGGTCAAGTaGTTTCACTTTGTTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: CSEKGFRSLQAWQLTFGMGVEVK*FHFVSF Trigger: GAATGAAACAAAGTGAAATCACTTGACCTCCACTCC...CATGCCAAATGTTAACTGCCAAGCTTGGAGTGACCTAAAGCCTTTTTCAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR TCA 90 bp | AAATTTCTACAGTTCCAGTCCTCTAGGAAAATGCTTCCAGAATACCAGTTGATTCAAAGGAAGCAGGAGTaGGTCAGGAGTGACCACAGT | + |
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Preference number: 2 (lower is better) Translates to: KFLQFQSSRKMLPEYQLIQRKQE*VRSDHS Trigger: ACTGTGGTCACTCCTGACTCACTCCTGCTTCCTTTG...AATCAACTGGTATTCTGGAAGCATTTTCCTAGAGGACTGGAACTGTAGAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGTCTACTTTAGTCTGGTGTCTTTAGAAACCCAAGATATGGTCCTCACAAGTGTTTCCCTGGAGTaGAGGTCAAGTGATTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TPVYFSLVSLETQDMVLTSVSLE*RSSDFT Trigger: AGTGAAATCACTTGACCTCCACTCCAGGGAAACACT...TGTGAGGACCATATCTTGGGTTTCTAAAGACACCAGACTAAAGTAGACAGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTATAGAACTGCATACACACCTGTCTACTTTAGTCTGGTGTCTTTAGAAACCACAAAGGGCCTTCCATaGATGCTAACAGTGTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NYRTAYTPVYFSLVSLETTKGLP*MLTVFP Trigger: GGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGT...GGTTTCTAAAGACACCAGACTAAAGTAGACAGGTGTGTATGCAGTTCTATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR-3UTR CCA 90 bp | GACACTGTGGCTTTTCAATTCTGGTTTGCAGAAACCTTATCCTCAATTAAATCTCCACACTCTCCCCACTaGAAGTTTGAGTGTCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DTVAFQFWFAETLSSIKSPHSPH*KFECLH Trigger: ATGCAGACACTCAAACTTCCAGTGGGGAGAGTGTGG...AGATTTAATTGAGGATAAGGTTTCTGCAAACCAGAATTGAAAAGCCACAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTTCTATGAGGATCCAGGTCTTCCTGCTTGCATGGCAAATACTTTACCACCAGTTTGTTAGAAATTaGTTAAGTGTACAGAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: LLSMRIQVFLLAWQILYHQFVRN*LSVQRP Trigger: GGGTCTCTGTACACTTAATCAATTTCTAACAAACTG...GTGGTAAAGTATTTGCCATGCAAGCAGGAAGACCTGGATCCTCATAGAAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCCTCTAGGAAAATGCTTCCAGAATACCAGTTGATTTTAGAATATAACAAGAACACAGTAGTTGCCTaGAGGGATCTACCAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QSSRKMLPEYQLILEYNKNTVVA*RDLPEA Trigger: AGCCTCTGGTAGATCCCTGCAGGCAACTACTGTGTT...CTTGTTATATTCTAAAATCAACTGGTATTCTGGAAGCATTTTCCTAGAGGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGACCTAAAGACGTTTAGACTTTTGGAATTATCAGTGATGAATGTGGGAACAAGTGTTTCCCTGGAGTaGAGGTCAAGTGATTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: IDLKTFRLLELSVMNVGTSVSLE*RSSDFT Trigger: AGTGAAATCACTTGACCTCCACTCCAGGGAAACACT...TGTTCCCACATTCATCACTGATAATTCCAAAAGTCTAAACGTCTTTAGGTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTTAGACTTTTGGAATTATCAGTGATGAATGTGGGAACATTCCAACTTACTAGTGTTTCCCTGGAGTaGAGGTCAAGTGATTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TFRLLELSVMNVGTFQLTSVSLE*RSSDFT Trigger: AGTGAAATCACTTGACCTCCACTCCAGGGAAACACT...AGTAAGTTGGAATGTTCCCACATTCATCACTGATAATTCCAAAAGTCTAAACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR CAA 90 bp | ATGGAACCAATCCAGTTACTGCAGATCTGGCCAAAAACTATGATTTaGCTAAACAGATATACTATCAAGCTGCCCTATAAATTCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: MEPIQLLQIWPKTMI*LNRYTIKLPYKFLS Trigger: AGAGAGGAATTTATAGGGCAGCTTGATAGTATATCTGTTTAGCAAAATCATAGTTTTTGGCCAGATCTGCAGTAACTGGATTGGTTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | TCTTCCACCTTAGTAAGCTCCCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCCTCTGGAGCACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSTLVSSRLSSS*SSSVSASGALS Trigger: GCTCAGTGCTCCAGAGGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCGGGAGCTTACTAAGGTGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155450.2 |
||
| 3UTR GCA 72 bp | TTGCTGTGTCCCCTCGCACACTCTCGCTTCTACCTTTaGAACTGCCGGTCGGCTGGATGGATGGATGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCPLAHSRFYL*NCRSAGWMDGW Trigger: CCATCCATCCATCCATCCAGCCGACCGGCAGTTGCAAAGGTAGAAGCGAGAGTGTGCGAGGGGACACAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | TGCACATCTGACTGTACGCCCAGCTCTGGGACACCCTaGCGTCTCTGCTCTCCACAGGCGCCTATACTCATA | + |
|
Preference number: 3 (lower is better) Translates to: CTSDCTPSSGTP*RLCSPQAPILI Trigger: TATGAGTATAGGCGCCTGTGGAGAGCAGAGACGTCAGGGTGTCCCAGAGCTGGGCGTACAGTCAGATGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | GGAGCTCTTCCATCACCGTTTGCGTCCTCACACAGCTaGGATTTCCCAGGAAACCCACGCTTCCCCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GALPSPFASSHS*DFPGNPRFPFC Trigger: GCAAAAGGGGAAGCGTGGGTTTCCTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | AGCCTAACACCAGGTTTGGGACACCTCCCCTCAAGCTaGTGGTCAGGGTTTTCCTGGAGACACCTGGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SLTPGLGHLPSS*WSGFSWRHLAQ Trigger: TTGTGCCAGGTGTCTCCAGGAAAACCCTGACCATCAGCTTGAGGGGAGGTGTCCCAAACCTGGTGTTAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | ACAAAGGAGTTGGTAGGAGCTGAGTCACCAGTCCACTaGAGTGTGAAGCCCTGGTACATGCTGAGGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: TKELVGAESPVH*SVKPWYMLRAH Trigger: GTGTGCCCTCAGCATGTACCAGGGCTTCACACTCCAGTGGACTGGTGACTCAGCTCCTACCAACTCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCAGCTCGAAGGCCTCACCAGCAAAGTTTCTTTGTGCAGTGGATGGTAGTTCTCTCAGCAGCTGTGTaGCCTGAGTGGGACCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAARRPHQQSFFVQWMVVLSAAV*PEWDLP Trigger: TGGCAGGTCCCACTCAGGCAACACAGCTGCTGAGAG...AACTACCATCCACTGCACAAAGAAACTTTGCTGGTGAGGCCTTCGAGCTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | TTAACAGAGGGGCTTAGCAGAGCCACTGGGAAGCTTTaGCTCACAGCCCCGACAGTTCTTAGAGTGGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: LTEGLSRATGKL*LTAPTVLRVGT Trigger: CGTTCCCACTCTAAGAACTGTCGGGGCTGTGAGTCAAAGCTTCCCAGTGGCTCTGCTAAGCCCCTCTGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CTCTTAGAGAATGAATGCCCAGGTTCAGTTCCCACATaGACATCTGACTGTACGCCCAGCTCTGGGACACCC | + |
|
Preference number: 3 (lower is better) Translates to: LLENECPGSVPT*TSDCTPSSGTP Trigger: GGGTGTCCCAGAGCTGGGCGTACAGTCAGATGTGCATGTGGGAACTGAACCTGGGCATTCATTCTCTAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | CTTGCCTACACAGGCACCAATGGGCATGGGCTCTATTaGCAATACTGCTGCTCCATGCATCTTCCCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LAYTGTNGHGLY*QYCCSMHLPTS Trigger: GCTAGTGGGAAGATGCATGGAGCAGCAGTATTGCCAATAGAGCCCATGCCCATTGGTGCCTGTGTAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | CTGCAGGACTCTTGCCTACACAGGCACCAATGGGCATaGGCTCTATTGGCAATACTGCTGCTCCATGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LQDSCLHRHQWA*ALLAILLLHAS Trigger: AGATGCATGGAGCAGCAGTATTGCCAATAGAGCCCATGCCCATTGGTGCCTGTGTAGGCAAGAGTCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CTTTTAGAAAGGCCTCGGAGCTCTTCCATCACCGTTTaGGTCCTCACACAGCTGAGATTTCCCAGGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: LLERPRSSSITV*VLTQLRFPRKP Trigger: GGGTTTCCTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGCCTTTCTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | GTGCGTCAGCACACATGGAGGCCATCTGATGTTGCCTaGCTTCTTTCTATGAGGATCCAGGTCTTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRQHTWRPSDVA*LLSMRIQVFLL Trigger: AAGCAGGAAGACCTGGATCCTCATAGAAAGAAGGCAGGCAACATCAGATGGCCTCCATGTGTGCTGACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | AGTGAGTCAACAAGAGGGATGAGTCTGCAGGACTCTTaGCTACACAGGCACCAATGGGCATGGGCTCTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SESTRGMSLQDS*LHRHQWAWALL Trigger: CAATAGAGCCCATGCCCATTGGTGCCTGTGTAGGCAAGAGTCCTGCAGACTCATCCCTCTTGTTGACTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | CCAAGTTGCACAGCCTGTGGAGAGCTCCACCACAAATaGCCACAAATCCACATCACCACTCCATCATCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PSCTACGELHHK*PQIHITTPSSQ Trigger: TTGGGATGATGGAGTGGTGATGTGGATTTGTGGCCATTTGTGGTGGAGCTCTCCACAGGCTGTGCAACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | CATGTTCATGTGTGTGAGGGTGTGCGTCAGCACACATaGAGGCCATCTGATGTTGCCTGCCTTCTTTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: HVHVCEGVRQHT*RPSDVACLLSM Trigger: CATAGAAAGAAGGCAGGCAACATCAGATGGCCTCCATGTGTGCTGACGCACACCCTCACACACATGAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | CTAAATAAAAGCACATCTGGTGGAAATCCGCAGCCATaGGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNKSTSGGNPQP*ALSRCTWLSPA Trigger: TGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATGGCTGCGGATTTCCACCAGATGTGCTTTTATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| 3UTR TCA 72 bp | GCAACATCACAATTACACAAAGGAGTTGGTAGGAGCTaGGTCACCAGTCCACTGGAGTGTGAAGCCCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ATSQLHKGVGRS*VTSPLECEALV Trigger: TACCAGGGCTTCACACTCCAGTGGACTGGTGACTCAGCTCCTACCAACTCCTTTGTGTAATTGTGATGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | CATGGAGGCCATCTGATGTTGCCTGCCTTCTTTCTATaGGGATCCAGGTCTTCCTGCTTGCATGGCAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: HGGHLMLPAFFL*GSRSSCLHGKY Trigger: GTATTTGCCATGCAAGCAGGAAGACCTGGATCCTCATAGAAAGAAGGCAGGCAACATCAGATGGCCTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | GGAAGCTTTGACTCACAGCCCCGACAGTTCTTAGAGTaGGAACGATTTCTACATACAGAACAGCTCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSFDSQPRQFLE*ERFLHTEQLRH Trigger: GTGCCTGAGCTGTTCTGTATGTAGAAATCGTTCCCACTCTAAGAACTGTCGGGGCTGTGAGTCAAAGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | GCACTAAGTAATGAGATCCTGTCTCAAAACAGTGTGTaGTGGGGCATGCATGTGATCCCTGTCTCTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALSNEILSQNSV*WGMHVIPVSGR Trigger: TCTGCCAGAGACAGGGATCACATGCATGCCCCACCACACACTGTTTTGAGACAGGATCTCATTACTTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | ACAGTAGTTGCCTGCAGGGATCTACCAGAGGCTCTATaGTGCTGTTTCCTATACAAAGGGCCTTCCATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVVACRDLPEAL*CCFLYKGPSMH Trigger: ATGCATGGAAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGGCAACTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | CCGAGCAGCAACCAGGAATGGCAGCATGTCATTTTGTaGCAACCGACACTGTGGCTTTTCAATTCTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSSNQEWQHVIL*QPTLWLFNSGL Trigger: CAAACCAGAATTGAAAAGCCACAGTGTCGGTTGTCACAAAATGACATGCTGCCATTCCTGGTTGCTGCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | CGGCTGGATGGATGGATGGATGGATGGGTGGGTGGCTaGGTTTGTAGCTTTACTTTGCTGTTTTACATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RLDGWMDGWVGG*VCSFTLLFYMS Trigger: TGACATGTAAAACAGCAAAGTAAAGCTACAAACTCAGCCACCCACCCATCCATCCATCCATCCATCCAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | CAGGTCTTCCTGCTTGCATGGCAAATACTTTACCACTaGATCATCTGCCCAGTCCTGACGCTGAGACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QVFLLAWQILYH*IICPVLTLRLL Trigger: TAAGAGTCTCAGCGTCAGGACTGGGCAGATGATTCAGTGGTAAAGTATTTGCCATGCAAGCAGGAAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | ATCAAGCTGCCCTATAAATTCCTCTCTACTCACAGGTaGGTGCAGCTCGAAGGCCTCACCAGCAAAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IKLPYKFLSTHR*VQLEGLTSKVS Trigger: AGAAACTTTGCTGGTGAGGCCTTCGAGCTGCACTCACCTGTGAGTAGAGAGGAATTTATAGGGCAGCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | ATGAACTCTCAGCAGCTGTGTTGCCTGAGTGGGACCTaGCAGATCAAGACAATCGAGCTTCTAAATAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: MNSQQLCCLSGT*QIKTIELLNRL Trigger: CAGTCTATTTAGAAGCTCGATTGTCTTGATCTGGCAGGTCCCACTCAGGCAACACAGCTGCTGAGAGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | AGCTGCCCTATAAATTCCTCTCTACTCACAGGTGAGTaGAGCTCGAAGGCCTCACCAGCAAAGTTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCPINSSLLTGE*SSKASPAKFLC Trigger: ACAAAGAAACTTTGCTGGTGAGGCCTTCGAGCTGCACTCACCTGTGAGTAGAGAGGAATTTATAGGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CCTGGCACAATACAGACAACTGTCCCTGCACTTGTTTaGATATCAGGACAGGGCAGTAAAACTCTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGTIQTTVPALV*ISGQGSKTLLK Trigger: CTTCAGCAGAGTTTTACTGCCCTGTCCTGATATGCAAACAAGTGCAGGGACAGTTGTCTGTATTGTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | TTGGTTGGTACTCTCAGTGTACTAGGACATGCTGTGTaGGCTGAAATCATCAGCTGTGAACCCTGTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LVGTLSVLGHAV*AEIISCEPCEL Trigger: GAGTTCACAGGGTTCACAGCTGATGATTTCAGCCCACACAGCATGTCCTAGTACACTGAGAGTACCAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CTCTATGATGCTGTTTCCTATACAAAGGGCCTTCCATaGATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LYDAVSYTKGLP*MLTVFPWSGGQ Trigger: TTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATCATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CTGGTACATGCTGAGGGCACACGGGCCTTAAATTCATaGCCTACACCAGAATATGGAAACTGCAGAATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVHAEGTRALNS*PTPEYGNCRIK Trigger: CTTAATTCTGCAGTTTCCATATTCTGGTGTAGGGCATGAATTTAAGGCCCGTGTGCCCTCAGCATGTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | CTGCCTTCTTTCTATGAGGATCCAGGTCTTCCTGCTTaGATGGCAAATACTTTACCACTGAATCATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPSFYEDPGLPA*MANTLPLNHLP Trigger: GGGCAGATGATTCAGTGGTAAAGTATTTGCCATGCAAGCAGGAAGACCTGGATCCTCATAGAAAGAAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | GGCACCAATGGGCATGGGCTCTATTGGCAATACTGCTaGTCCATGCATCTTCCCACTAGCTCTATTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GTNGHGLYWQYC*SMHLPTSSIKI Trigger: TATTTTAATAGAGCTAGTGGGAAGATGCATGGAGCAGCAGTATTGCCAATAGAGCCCATGCCCATTGGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | TACAATCATGAACTCTCAGCAGCTGTGTTGCCTGAGTaGGACCTGCCAGATCAAGACAATCGAGCTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: YNHELSAAVLPE*DLPDQDNRASK Trigger: TTTAGAAGCTCGATTGTCTTGATCTGGCAGGTCCCACTCAGGCAACACAGCTGCTGAGAGTTCATGATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | GCTCGAAGGCCTCACCAGCAAAGTTTCTTTGTGCAGTaGATGGTAGTTAACACAGAAACAACTGGTCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ARRPHQQSFFVQ*MVVNTETTGPS Trigger: ACTTGGACCAGTTGTTTCTGTGTTAACTACCATCCACTGCACAAAGAAACTTTGCTGGTGAGGCCTTCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTATTCCAAGAATTGTGTGTAGTGGCTGAAATCCGAGTGCTGGTGATAAGTCCCACGCTTCCCCTTTaGCTGTTTTGCCAGCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVFQELCVVAEIRVLVISPTLPL*LFCQHK Trigger: TTTATGCTGGCAAAACAGCAAAAGGGGAAGCGTGGG...ACTTATCACCAGCACTCGGATTTCAGCCACTACACACAATTCTTGGAATACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | GTGTGGGAAGAGTTTCTTCCACACTCATCCCTGGTCTaGTCTATGTACATTCCTTCTCCTTCTCTCCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: VWEEFLPHSSLV*SMYIPSPSLHL Trigger: TAAGTGGAGAGAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCTTCCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | GGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTaGAGGTCAAGTGATTTCACTTTGTTTCATTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSMHANSVSLE*RSSDFTLFHSS Trigger: TGATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | ATGAAGTGTGGGAAGAGTTTCTTCCACACTCATCCCTaGTCTGATCTATGTACATTCCTTCTCCTTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MKCGKSFFHTHP*SDLCTFLLLLS Trigger: GGAGAGAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCTTCCCACACTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | AATTTAAAAGGAAACAATCTAAAGAATGCAGGATCCTaGCGTTTGCACGGTTGCTGTGTCCCCTCGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: NLKGNNLKNAGS*RLHGCCVPSHT Trigger: AGTGTGCGAGGGGACACAGCAACCGTGCAAACGTCAGGATCCTGCATTCTTTAGATTGTTTCCTTTTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | ACTTTTCAAACTGAAGTAACGAGGAGATGGGAATTTTaGGCTGGGAGTCAACCTGCACTAAGTAATGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: TFQTEVTRRWEF*AGSQPALSNEI Trigger: GATCTCATTACTTAGTGCAGGTTGACTCCCAGCTCAAAATTCCCATCTCCTCGTTACTTCAGTTTGAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | TTGTTTGCATATCAGGACAGGGCAGTAAAACTCTGCTaGAGACACTATACATTCTGGTCACAGACTATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFAYQDRAVKLC*RHYTFWSQTMK Trigger: CTTCATAGTCTGTGACCAGAATGTATAGTGTCTTCAGCAGAGTTTTACTGCCCTGTCCTGATATGCAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | TTAAGATTTTCACATGTAATCAAGCATAGTTTCCATTaGATCCGAGCAGCAACCAGGAATGGCAGCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRFSHVIKHSFH*IRAATRNGSMS Trigger: TGACATGCTGCCATTCCTGGTTGCTGCTCGGATGCAATGGAAACTATGCTTGATTACATGTGAAAATCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | ACAAGGACTAATCTCTGGTCAGATGTCTCTTTGCTATaGAAAAATCCAGCCTTTCAGCTGGTCTTAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TRTNLWSDVSLL*KNPAFQLVLRT Trigger: AGTTCTTAAGACCAGCTGAAAGGCTGGATTTTTCCATAGCAAAGAGACATCTGACCAGAGATTAGTCCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | TATACATTCTGGTCACAGACTATGAAGAAACCAAGTTaGCCCACAAAACTTGGTTGGTACTCTCAGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: YTFWSQTMKKPS*PTKLGWYSQCT Trigger: AGTACACTGAGAGTACCAACCAAGTTTTGTGGGCCAACTTGGTTTCTTCATAGTCTGTGACCAGAATGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTTCTACAGTTCCAGTCCTCTAGGAAAATGCTTCCAGAATACCAGTTGATTCTCCCCACTGGAAGTTaGAGTGTCTGCATGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KFLQFQSSRKMLPEYQLILPTGS*SVCMFL Trigger: TAAAAACATGCAGACACTCAAACTTCCAGTGGGGAG...AATCAACTGGTATTCTGGAAGCATTTTCCTAGAGGACTGGAACTGTAGAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| 3UTR GCA 72 bp | AGTTCAAAGTCCATAATATTACTCTTAGAGAATGAATaGCCAGGTTCAGTTCCCACATGCACATCTGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSKSIILLLENE*PGSVPTCTSDC Trigger: ACAGTCAGATGTGCATGTGGGAACTGAACCTGGGCATTCATTCTCTAAGAGTAATATTATGGACTTTGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CCA 72 bp | CCACAGGAGATGGAACCAATCCAGTTACTGCAGATCTaGCCAAAAACTATGATTTTGCTAAACAGATATACT | + |
|
Preference number: 3 (lower is better) Translates to: PQEMEPIQLLQI*PKTMILLNRYT Trigger: AGTATATCTGTTTAGCAAAATCATAGTTTTTGGCCAGATCTGCAGTAACTGGATTGGTTCCATCTCCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | ACATATGCAATCCTCAAAGATACTTACTTTTCAAACTaGAGTAACGAGGAGATGGGAATTTTGAGCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TYAILKDTYFSN*SNEEMGILSWE Trigger: CTCCCAGCTCAAAATTCCCATCTCCTCGTTACTTCAGTTTGAAAAGTAAGTATCTTTGAGGATTGCATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR TCA 72 bp | AAACTTTTCTGTATTCCAAGAATTGTGTGTAGTGGCTaGAATCCGAGTGCTGGTGATAAGTTCTTTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLFCIPRIVCSG*NPSAGDKFFYS Trigger: TGAATAAAAGAACTTATCACCAGCACTCGGATTTCAGCCACTACACACAATTCTTGGAATACAGAAAAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMYLALAGSTWQWAAGHRLSSS*SSSVSA Trigger: GGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCG...GTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCTWLSPAAPGSGQQRLSSS*SSSVSA Trigger: GGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCG...CTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCTTCCGTCAGCGCCTCTaGAGCACTGAGCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRRQHLAVGSRTQVGFRQRL*STEHGN Trigger: GTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAA...GCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGGTTGCCGTCACGTCTTaGCACCCTTTGGCAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWLSPAAPGSGQQDTGRQVAVTS*HPLAMF Trigger: GAACATTGCCAAAGGGTGGCAAGACGTGACGGCAAC...CTGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGTTCCGTCAGCGCCTCTaGAGCACTGAGCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTWLSPAAPGSGQQDTGRFRQRL*STEHGN Trigger: GTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAA...CCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGTTCCGTCAGCGCCTCTaGAGCACTGAGCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: MYLALAGSTWQWAAGHRSFRQRL*STEHGN Trigger: GTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAA...CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | GATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGTTGCCGTCACGTCTTaGCACCCTTTGGCAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVLGSRRQHLAVGSRTQVVAVTS*HPLAMF Trigger: GAACATTGCCAAAGGGTGGCAAGACGTGACGGCAAC...GACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGAGGTCTTCTTGTATaGATTGGTTGCCGTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRRQHLAVGSRTQVGRGLLV*IGCRHV Trigger: GACGTGACGGCAACCAATGCATACAAGAAGACCTCT...GCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCTTCCGTCAGCGCCTCTaGAGCACTGAGCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERCQDVLGSRRQHLAVGSFRQRL*STEHGN Trigger: GTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAA...GCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| 3UTR CAA 72 bp | TGGAAATCCGCAGCCATGAGCGTTGTCAAGATGTACTaGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKSAAMSVVKMY*ALAGSTWQWAA Trigger: TGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATGGCTGCGGATTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGGTTGCCGTCACGTCTTaGCACCCTTTGGCAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMYLALAGSTWQWAAGHRVAVTS*HPLAMF Trigger: GAACATTGCCAAAGGGTGGCAAGACGTGACGGCAAC...CCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | CGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGGTTGCCGTCACGTCTTaGCACCCTTTGGCAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCQDVLGSRRQHLAVGSRVAVTS*HPLAMF Trigger: GAACATTGCCAAAGGGTGGCAAGACGTGACGGCAAC...CCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGTTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWLSPAAPGSGQQDTGRQFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...CTGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: DVLGSRRQHLAVGSRTQVEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...GACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCAGAGGTCTTCTTGTATaGATTGGTTGCCGTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVLGSRRQHLAVGSRTQVRGLLV*IGCRHV Trigger: GACGTGACGGCAACCAATGCATACAAGAAGACCTCT...GACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCTCCTCTTGCTCCTCTTCCGTCAGCGCCTCTGGAGCACTGAGCATGGTAGAGGCAACTCGAAGTaGGACCCCAGAAGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLLLLLFRQRLWSTEHGRGNSK*DPRSQK Trigger: CTTTTGGCTTCTGGGGTCGCACTTCGAGTTGCCTCT...ACCATGCTCAGTGCTCCAGAGGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155450.2 |
||
| CDS-3UTR CCA 90 bp | TACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCATTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLALAGSTWQWAAGHRSAFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...TGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCCTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERCQDVLGSRRQHLAVGSLCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...GCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACCTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKMYLALAGSTWQWAAGHLCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...GTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| 3UTR CAA 72 bp | GTTGCTGTGTCCCCTCGCACACTCTCGCTTCTACCTTaGCAACTGCCGGTCGGCTGGATGGATGGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VAVSPRTLSLLP*QLPVGWMDGWM Trigger: CATCCATCCATCCATCCAGCCGACCGGCAGTTGCAAAGGTAGAAGCGAGAGTGTGCGAGGGGACACAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | GCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGAGAGGTCTTCTTGTATaGATTGGTTGCCGTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCTWLSPAAPGSGQQRGLLV*IGCRHV Trigger: GACGTGACGGCAACCAATGCATACAAGAAGACCTCT...CTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCACTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVVKMYLALAGSTWQWAALCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...TGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACAGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CQDVLGSRRQHLAVGSRTEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...TGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | AGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVVKMYLALAGSTWQWAAEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...TGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGAAGAGGTCTTCTTGTATaGATTGGTTGCCGTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVKMYLALAGSTWQWAAGRGLLV*IGCRHV Trigger: GACGTGACGGCAACCAATGCATACAAGAAGACCTCT...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | CGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGTTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCQDVLGSRRQHLAVGSRFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...CCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGTTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCTWLSPAAPGSGQQFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...CTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCACTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSVVKMYLALAGSTWQWALCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...TGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DAVSYTKGLPCMLTVFPWRLSSS*SSSVSA Trigger: GGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCG...CCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAACAATCTAAAGAATGCAGGATCCTGACGTTTGCACGGTTGCTGTGTCCCCGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKQSKECRILTFARLLCPRLSSS*SSSVSA Trigger: GGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCG...GGGACACAGCAACCGTGCAAACGTCAGGATCCTGCATTCTTTAGATTGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTACTTGGGACAGAGTCTaGATTTCTTCTTCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RCTWLSPAAPGSGQQDTGTWDRV*ISSSTL Trigger: TAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGT...ACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGACTTGGGACAGAGTCTaGATTTCTTCTTCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QDVLGSRRQHLAVGSRTQTWDRV*ISSSTL Trigger: TAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGT...CTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGATTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVKMYLALAGSTWQWAAGFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| 3UTR CAA 72 bp | CTGATGGCATCAATCGACCTGGCCTCATCTACCAAGTaGTGGCATCAACAGCACTACACGCACCACACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMASIDLASSTK*WHQQHYTHHTP Trigger: TGGGGTGTGGTGCGTGTAGTGCTGTTGATGCCACAACTTGGTAGATGAGGCCAGGTCGATTGATGCCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR TCA 90 bp | ATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGTTTCTTCAAATGACTTaGAAGTTGGGGAGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MYLALAGSTWQWAAGHRSFLQMT*KLGSFS Trigger: TGAGAAACTCCCCAACTTTCAAGTCATTTGAAGAAA...CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000094381.11 |
||
| CDS-3UTR GCA 90 bp | TACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTACGCCTCAGCTCCTCTTaGTCCTCTTCCGTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQRLYDAVSYTKGLPCMLRLSSS*SSSVSA Trigger: GGCGCTGACGGAAGAGGAGCAAGAGGAGCTGAGGCG...TAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | TTACCAAGGCAAGAGCAGGACCCACACTCTCCCCACTGGAAGTTTGAGTGTCTGGTTGCCGTCACGTCTTaGCACCCTTTGGCAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQEQDPHSPHWKFECLVAVTS*HPLAMF Trigger: GAACATTGCCAAAGGGTGGCAAGACGTGACGGCAAC...CAGACACTCAAACTTCCAGTGGGGAGAGTGTGGGTCCTGCTCTTGCCTTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACGAATGTGAGAAAGCTTaGAATTTCACGTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRCTWLSPAAPGSGQQDECEKA*NFTSSS Trigger: GCTGGAAGACGTGAAATTGCAAGCTTTCTCACATTC...GTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063496.14 ENSMUST00000094381.11 |
||
| CDS-3UTR CCA 90 bp | CATGAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCACTTGGGACAGAGTCTaGATTTCTTCTTCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HERCQDVLGSRRQHLAVGTWDRV*ISSSTL Trigger: TAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGT...GCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAACTTGGGACAGAGTCTaGATTTCTTCTTCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRCTWLSPAAPGSGQQDTTWDRV*ISSSTL Trigger: TAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGT...TGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| 3UTR CAA 72 bp | GCTTTTAGAAAGGCCTCGGAGCTCTTCCATCACCGTTaGCGTCCTCACACAGCTGAGATTTCCCAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AFRKASELFHHR*RPHTAEISQET Trigger: GGTTTCCTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGCCTTTCTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGCCTTTTCCGTCAGCGCCTCTaGAGCACTGAGCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGIYQRLYDAVSYTKGLFRQRL*STEHGN Trigger: GTTACCATGCTCAGTGCTCCAGAGGCGCTGACGGAA...AAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| 3UTR CAA 72 bp | CAGGATCCCTACAATCATGAACTCTCAGCAGCTGTGTaGCCTGAGTGGGACCTGCCAGATCAAGACAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QDPYNHELSAAV*PEWDLPDQDNR Trigger: TCGATTGTCTTGATCTGGCAGGTCCCACTCAGGCAACACAGCTGCTGAGAGTTCATGATTGTAGGGATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGCCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGCGAGGTGTTCCCGCTTaGAGAGAGGTAGAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLQGSTRGSMMLFPIQRRGVPA*REVEVV Trigger: AACTACCTCTACCTCTCTCCAAGCGGGAACACCTCG...CCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091354.12 ENSMUST00000094381.11 |
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| CDS-3UTR CCA 90 bp | TATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAACGAGGTGTTCCCGCTTaGAGAGAGGTAGAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTKGLPCMLTVFPWSGGQRGVPA*REVEVV Trigger: AACTACCTCTACCTCTCTCCAAGCGGGAACACCTCG...TTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091354.12 ENSMUST00000094381.11 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGCCTTGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGIYQRLYDAVSYTKGLEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...AAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACATCTGGTGGAAATCCGCAGCCATGAGCGTTGTCAAGATGTACTTGGCAGAGGTCTTCTTGTATaGATTGGTTGCCGTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAHLVEIRSHERCQDVLGRGLLV*IGCRHV Trigger: GACGTGACGGCAACCAATGCATACAAGAAGACCTCT...GCCAAGTACATCTTGACAACGCTCATGGCTGCGGATTTCCACCAGATGTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| 3UTR CAA 72 bp | AGACACCTGGCACAATACAGACAACTGTCCCTGCACTaGTTTGCATATCAGGACAGGGCAGTAAAACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLAQYRQLSLH*FAYQDRAVKLC Trigger: GCAGAGTTTTACTGCCCTGTCCTGATATGCAAACAAGTGCAGGGACAGTTGTCTGTATTGTGCCAGGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSYTKGLPCMLTVFPWSEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...ACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTCTTCCACACTCATCCCTGGTCTGATCTATGTACATTCCTTCTCCTTCGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSSTLIPGLIYVHSFSFEMLLF*GQYLGQ Trigger: CTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTC...GAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGACTTGGGACAGAGTCTaGATTTCTTCTTCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DAVSYTKGLPCMLTVFPWTWDRV*ISSSTL Trigger: TAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGT...CCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| 3UTR CAA 72 bp | CTATACATTCTGGTCACAGACTATGAAGAAACCAAGTaGGCCCACAAAACTTGGTTGGTACTCTCAGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LYILVTDYEETK*AHKTWLVLSVY Trigger: GTACACTGAGAGTACCAACCAAGTTTTGTGGGCCAACTTGGTTTCTTCATAGTCTGTGACCAGAATGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CAA 72 bp | TATACAGTGGATTGTGCTCATCTGAGAAGCCATAGGTaGTCAATAAAAAGCCTAACACCAGGTTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVDCAHLRSHR*SIKSLTPGLGH Trigger: GTGTCCCAAACCTGGTGTTAGGCTTTTTATTGACAACCTATGGCTTCTCAGATGAGCACAATCCACTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGCTTTTCAATTCTGGTTTGCAGAAACCTTATCCTCAATTAAATCTAGCCTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFQFWFAETLSSIKSSLCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...GCTAGATTTAATTGAGGATAAGGTTTCTGCAAACCAGAATTGAAAAGCCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| CDS-3UTR CCA 90 bp | GTTTCCCTGGAGTGGAGGTCAAGTGATTTCACTTTGTTTCATTCATCAACTATTTTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEWRSSDFTLFHSSTIFAANT*DRVWIS Trigger: AGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAA...AATAGTTGATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGACGTTTAGACTTTTGGAATTATCAGTGATGAATGTGGGAACATTCCAACTCTGTCATCTGTTCTaGAGGAGGCTCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKTFRLLELSVMNVGTFQLCHLF*RRLCGH Trigger: ATGACCACAGAGCCTCCTCCAGAACAGATGACAGAG...TTGGAATGTTCCCACATTCATCACTGATAATTCCAAAAGTCTAAACGTCTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCCCTGGAGTGGAGGTCAAGTGATTTCACTTTGTTTCATTCATCAACTATTGAATGTGAGAAAGCTTaGAATTTCACGTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLEWRSSDFTLFHSSTIECEKA*NFTSSS Trigger: GCTGGAAGACGTGAAATTGCAAGCTTTCTCACATTC...AATAGTTGATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094381.11 |
||
| CDS-3UTR TCA 90 bp | CTAACAGTGTTTCCCTGGAGTGGAGGTCAAGTGATTTCACTTTGTTTCATTCATTTTCTTCAAATGACTTaGAAGTTGGGGAGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTVFPWSGGQVISLCFIHFLQMT*KLGSFS Trigger: TGAGAAACTCCCCAACTTTCAAGTCATTTGAAGAAA...ATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAACACTGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000094381.11 |
||
| 3UTR CAA 72 bp | ATTTTAGAGGTCACAGAGATGGCTGAGGAGAGCATTTaGGGAGTTGGGATAATACTAAAAACTAGTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: ILEVTEMAEESI*GVGIILKTSHI Trigger: AATATGACTAGTTTTTAGTATTATCCCAACTCCCAAAATGCTCTCCTCAGCCATCTCTGTGACCTCTAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| 3UTR CAA 72 bp | ATCCAGTTACTGCAGATCTGGCCAAAAACTATGATTTaGCTAAACAGATATACTATCAAGCTGCCCTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQLLQIWPKTMI*LNRYTIKLPYK Trigger: TTTATAGGGCAGCTTGATAGTATATCTGTTTAGCAAAATCATAGTTTTTGGCCAGATCTGCAGTAACTGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120143.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGCTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGSRRQHLAVGSRTQVGSSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...GCTGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGCACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSRRQHLAVGSRTQVGSTSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...GCTGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: YLALAGSTWQWAAGHRSAGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...TGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAGCGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TWLSPAAPGSGQQDTGRQRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...CTGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRRQHLAVGSRTQVGTSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...GCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCGCGAGGTGTTCCCGCTaGGAGAGAGGTAGAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ERCQDVLGSRRQHLAVGSARCSR*ERGRGS Trigger: ACTACCTCTACCTCTCTCCAAGCGGGAACACCTCGC...GCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091354.12 ENSMUST00000094381.11 |
||
| CDS-3UTR CAA 90 bp | TGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CTWLSPAAPGSGQQDTGRTSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...CCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MYLALAGSTWQWAAGHRSSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGGCAACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: YLALAGSTWQWAAGHRSATSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...TGCCGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGAGCGAGGTGTTCCCGCTaGGAGAGAGGTAGAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVKMYLALAGSTWQWAAGARCSR*ERGRGS Trigger: ACTACCTCTACCTCTCTCCAAGCGGGAACACCTCGC...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091354.12 ENSMUST00000094381.11 |
||
| CDS-3UTR CAA 90 bp | ATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCGCGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MYLALAGSTWQWAAGHRSRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...CGACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HERCQDVLGSRRQHLAVGGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...GCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSRCTWLSPAAPGSGQQDGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...GTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACAGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CQDVLGSRRQHLAVGSRTGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...TGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | CGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RCQDVLGSRRQHLAVGSRSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...CCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTCACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: DVLGSRRQHLAVGSRTQVTSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...GACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
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| CDS-3UTR CAA 90 bp | AAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KMYLALAGSTWQWAAGHRTSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...CCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAGGTACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RCTWLSPAAPGSGQQDTGTSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...ACCTGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VVKMYLALAGSTWQWAAGRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LSRCTWLSPAAPGSGQQDTSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...GTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
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| CDS-3UTR CAA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGAACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VVKMYLALAGSTWQWAAGTSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGACACAACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: SRCTWLSPAAPGSGQQDTTSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...TGTGTCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCATTTTGCGGCCAATACTaGGGACAGAGTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVVKMYLALAGSTWQWAAFCGQY*GQSLDF Trigger: GAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAA...TGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCTTTTGCGGCCAATACTaGGGACAGAGTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HERCQDVLGSRRQHLAVGFCGQY*GQSLDF Trigger: GAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAA...GCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGGATTTTGCGGCCAATACTaGGGACAGAGTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVKMYLALAGSTWQWAAGFCGQY*GQSLDF Trigger: GAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAA...TCCTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
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| CDS-3UTR CAA 90 bp | GCCTCGGAGCTCTTCCATCACCGTTTGCGTCCTCACACAGCTGAGATTTCCCAGTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ASELFHHRLRPHTAEISQSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...CTGGGAAATCTCAGCTGTGTGAGGACGCAAACGGTGATGGAAGAGCTCCGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| CDS GCA 90 bp | GGAGATGCCGAGCTTCCGCTTGAGCTCGGCGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAGAGTCTGGATTTCTTCTTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GDAELPLELGEMLLF*GQYLGQSLDFFFHL Trigger: AAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCGCCGAGCTCAAGCGGAAGCTCGGCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000124956.2 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS CCA 90 bp | TTCCGCTTGAGCTCGGCGAGATGCTTCTCTTTTGCGGCCAATACTTaGGACAGAGTCTGGATTTCTTCTTCCACCTTAGTAAGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLSSARCFSFAANT*DRVWISSSTLVSSR Trigger: GCGGGAGCTTACTAAGGTGGAAGAAGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCGCCGAGCTCAAGCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000124956.2 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS-3UTR CAA 90 bp | GCGTTGTCAAGATGTACTTGGCTCTCGCCGGCAGCACCTGGCAGTGGGCAGCAGTTTTCTTCAAATGACTaGAAAGTTGGGGAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALSRCTWLSPAAPGSGQQFSSND*KVGEFL Trigger: GAGAAACTCCCCAACTTTCAAGTCATTTGAAGAAAA...CTGCTGCCCACTGCCAGGTGCTGCCGGCGAGAGCCAAGTACATCTTGACAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000094381.11 |
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| CDS-3UTR CAA 90 bp | TATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAAGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: YTKGLPCMLTVFPWSGGQGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...TTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | AGTTGCCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGGTTGCCGTCACGTCTaGCCACCCTTTGGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCLQGSTRGSMMLFPIQRGCRHV*PPFGNV Trigger: AACATTGCCAAAGGGTGGCAAGACGTGACGGCAACC...CCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | AAAGCACATCTGGTGGAAATCCGCAGCCATGAGCGTTGTCAAGATGTACTTGGCTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KAHLVEIRSHERCQDVLGSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...GCCAAGTACATCTTGACAACGCTCATGGCTGCGGATTTCCACCAGATGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 |
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| CDS-3UTR CAA 90 bp | AAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAAGTGATTACGTCTTGCCACCCTTaGGCAATGTTCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGLPCMLTVFPWSGGQVITSCHP*AMFCLN Trigger: GTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGT...AATCACTTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | AGTTGCCTGCAGGGATCTACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCLQGSTRGSMMLFPIQRSCMHW*PSRLAT Trigger: GGTGGCAAGACGTGACGGCAACCAATGCATACAAGA...CCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTAGATCCCTGCAGGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | TATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAGTGGAGGTCAACGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: YTKGLPCMLTVFPWSGGQRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...TTGACCTCCACTCCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | GTAATCAAGCATAGTTTCCATTGCATCCGAGCAGCAACCAGGAATGGCAGCATGTTTTGCGGCCAATACTaGGGACAGAGTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VIKHSFHCIRAATRNGSMFCGQY*GQSLDF Trigger: GAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAA...CATGCTGCCATTCCTGGTTGCTGCTCGGATGCAATGGAAACTATGCTTGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | TACCAGAGGCTCTATGATGCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTAACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: YQRLYDAVSYTKGLPCMLTSSSF*VMTEPT Trigger: GGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGT...TAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATCATAGAGCCTCTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTCTTCCACACTCATCCCTGGTCTGATCTATGTACATTCCTTCTCCTTCTTTTGCGGCCAATACTaGGGACAGAGTCTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVSSTLIPGLIYVHSFSFFCGQY*GQSLDF Trigger: GAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAA...GAAGGAGAAGGAATGTACATAGATCAGACCAGGGATGAGTGTGGAAGAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | GATGCTGTTTCCTATACAAAGGGCCTTCCATGCATGCTAACAGTGTTTCCCTGGAAAATCAAAGGGGGATaGGTAATCATCAGCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: DAVSYTKGLPCMLTVFPWKIKGG*VIISQL Trigger: GAGTTGGCTGATGATTACCAATCCCCCTTTGATTTT...CCAGGGAAACACTGTTAGCATGCATGGAAGGCCCTTTGTATAGGAAACAGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091354.12 ENSMUST00000094381.11 |
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| CDS-3UTR CAA 90 bp | CTAACAGTGTTTCCCTGGAGTGGAGGTCAAGTGATTTCACTTTGTTTCATTCATCGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LTVFPWSGGQVISLCFIHRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...ATGAATGAAACAAAGTGAAATCACTTGACCTCCACTCCAGGGAAACACTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 |
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| CDS TCA 90 bp | TTGAAAGTTGGGGAGTTTCTCATAGCAGGCATGCTAATCGAATGCTaGATGGAGCGGATACTAAATGAATGTGAGAAAGCTTGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVGEFLIAGMLIEC*MERILNECEKACNF Trigger: GAAATTGCAAGCTTTCTCACATTCATTTAGTATCCGCTCCATTCAGCATTCGATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094381.11 |
||
| CDS-3UTR CAA 90 bp | ATAGACCTAAAGACGTTTAGACTTTTGGAATTATCAGTGATGAATGTGGGAACACGAGATGCTTCTCTTTaGCGGCCAATACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: IDLKTFRLLELSVMNVGTRDASL*RPILGT Trigger: TGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCG...TGTTCCCACATTCATCACTGATAATTCCAAAAGTCTAAACGTCTTTAGGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000120143.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAATACCAGTTGATTTTAGAATATAACAAGTTTTGTCCAGACCACTGTTTTTCTTCAAATGACTaGAAAGTTGGGGAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPEYQLILEYNKFCPDHCFSSND*KVGEFL Trigger: GAGAAACTCCCCAACTTTCAAGTCATTTGAAGAAAA...ACAGTGGTCTGGACAAAACTTGTTATATTCTAAAATCAACTGGTATTCTGGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000091355.12 |
||
| CDS TCA 72 bp | CCGTCACGTCTTGCCACCCTTTGGCAATGTTCTGCTTaGACTCCTGAAGCGAGGAGATGCCGAGCTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRLATLWQCSA*TPEARRCRASA Trigger: AGCGGAAGCTCGGCATCTCCTCGCTTCAGGAGTTCAAGCAGAACATTGCCAAAGGGTGGCAAGACGTGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000124956.2 ENSMUST00000134788.8 ENSMUST00000145905.8 |
||
| CDS GCA 72 bp | GAGGAGATGCCGAGCTTCCGCTTGAGCTCGGCGAGATaGTTCTCTTTTGCGGCCAATACTTGGGACAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EEMPSFRLSSAR*FSFAANTWDRV Trigger: GACTCTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCGCCGAGCTCAAGCGGAAGCTCGGCATCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000124956.2 ENSMUST00000134788.8 ENSMUST00000145905.8 |
||
| CDS CAA 90 bp | GTCATCTGTTCTGGAGGAGGCTCTGTGGTCATGGTACTGGTAGCGTaGGCTGTGGAATTCAGGACTTCTCCAAAATCGCCGCCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VICSGGGSVVMVLVA*AVEFRTSPKSPPAG Trigger: GCCTGCTGGCGGCGATTTTGGAGAAGTCCTGAATTCCACAGCCAACGCTACCAGTACCATGACCACAGAGCCTCCTCCAGAACAGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000145905.8 |
||
| CDS GCA 72 bp | CAGCCAACCACACAGGCTCAAAGAGGCAACTCGAAGTaGGACCCCAGAAGCCAAAAGTCTAGACAGCATGCG | + |
|
Preference number: 6 (lower is better) Translates to: QPTTQAQRGNSK*DPRSQKSRQHA Trigger: CGCATGCTGTCTAGACTTTTGGCTTCTGGGGTCGCACTTCGAGTTGCCTCTTTGAGCCTGTGTGGTTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134788.8 ENSMUST00000155450.2 |
||
| CDS GCA 72 bp | GAGCTTCCGCTTGAGCTCGGCGAGATGCTTCTCTTTTaGGGCCAATACTTGGGACAGAGTCTGGATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELPLELGEMLLF*GQYLGQSLDFF Trigger: GAAGAAATCCAGACTCTGTCCCAAGTATTGGCCGCAAAAGAGAAGCATCTCGCCGAGCTCAAGCGGAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000124956.2 ENSMUST00000134788.8 ENSMUST00000145905.8 |
||
| CDS GCA 72 bp | ACTGAGCCAACCGATGAAAATGCAGCGGAGGCCTTCTaGCCAGCTTGCGATAGAGTTTCAGAGGTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TEPTDENAAEAF*PACDRVSEVFL Trigger: CAAGAAGACCTCTGAAACTCTATCGCAAGCTGGGCAGAAGGCCTCCGCTGCATTTTCATCGGTTGGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000134788.8 ENSMUST00000145905.8 |
||
| CDS CAA 72 bp | TTCTGCCCAGCTTGCGATAGAGTTTCAGAGGTCTTCTaGTATGCATTGGTTGCCGTCACGTCTTGCCACCCT | + |
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Preference number: 6 (lower is better) Translates to: FCPACDRVSEVF*YALVAVTSCHP Trigger: AGGGTGGCAAGACGTGACGGCAACCAATGCATACAAGAAGACCTCTGAAACTCTATCGCAAGCTGGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS CAA 72 bp | GCTTGCGATAGAGTTTCAGAGGTCTTCTTGTATGCATaGGTTGCCGTCACGTCTTGCCACCCTTTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: ACDRVSEVFLYA*VAVTSCHPLAM Trigger: CATTGCCAAAGGGTGGCAAGACGTGACGGCAACCAATGCATACAAGAAGACCTCTGAAACTCTATCGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS CCA 72 bp | CTTGCGATAGAGTTTCAGAGGTCTTCTTGTATGCATTaGTTGCCGTCACGTCTTGCCACCCTTTGGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: LAIEFQRSSCMH*LPSRLATLWQC Trigger: ACATTGCCAAAGGGTGGCAAGACGTGACGGCAACCAATGCATACAAGAAGACCTCTGAAACTCTATCGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS CAA 72 bp | GCGATAGAGTTTCAGAGGTCTTCTTGTATGCATTGGTaGCCGTCACGTCTTGCCACCCTTTGGCAATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AIEFQRSSCMHW*PSRLATLWQCS Trigger: AGAACATTGCCAAAGGGTGGCAAGACGTGACGGCAACCAATGCATACAAGAAGACCTCTGAAACTCTATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000134788.8 ENSMUST00000145905.8 |
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| CDS TCA 72 bp | GGGGAGTTTCTCATAGCAGGCATGCTAATCGAATGCTaGATGGAGCGGATATTCACGTCTTCCAGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GEFLIAGMLIEC*MERIFTSSSFL Trigger: CAAAAAGCTGGAAGACGTGAATATCCGCTCCATTCAGCATTCGATTAGCATGCCTGCTATGAGAAACTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091355.12 |
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| CDS CAA 90 bp | CTAAATGAATGTGAGAAAGCTTGCAATTTCACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACCGATGAAAATGCAGCGGAGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNECEKACNFTSSSF*VMTEPTDENAAEAF Trigger: GAAGGCCTCCGCTGCATTTTCATCGGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGTGAAATTGCAAGCTTTCTCACATTCATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063496.14 ENSMUST00000094381.11 |
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| CDS CAA 72 bp | TGTGAGAAAGCTTGCAATTTCACGTCTTCCAGCTTTTaGGTGATGACTGAGCCAACCGATGAAAATGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CEKACNFTSSSF*VMTEPTDENAA Trigger: CGCTGCATTTTCATCGGTTGGCTCAGTCATCACCAAAAAGCTGGAAGACGTGAAATTGCAAGCTTTCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063496.14 ENSMUST00000094381.11 |
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| CDS TCA 72 bp | GGGGAGTTTCTCATAGCAGGCATGCTAATCGAATGCTaGATGGAGCGGATACTAAATGAATGTGAGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GEFLIAGMLIEC*MERILNECEKA Trigger: AGCTTTCTCACATTCATTTAGTATCCGCTCCATTCAGCATTCGATTAGCATGCCTGCTATGAGAAACTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094381.11 |
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| CDS CAA 72 bp | GAATTCAGGACTTCTCCAAAATCGCCGCCAGCAGGCTaGGCTCCTCCTACTTTAGACTTTAAATTTTCAACT | + |
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Preference number: 6 (lower is better) Translates to: EFRTSPKSPPAG*APPTLDFKFST Trigger: AGTTGAAAATTTAAAGTCTAAAGTAGGAGGAGCCAAGCCTGCTGGCGGCGATTTTGGAGAAGTCCTGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000063496.14 ENSMUST00000091354.12 ENSMUST00000091355.12 ENSMUST00000094381.11 ENSMUST00000120143.8 ENSMUST00000121038.8 ENSMUST00000145905.8 |
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