Pregenerated sensors for TPCN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048677Ensembl transcript IDs: ENSMUST00000058022.6, ENSMUST00000208148.2, ENSMUST00000208328.2, ENSMUST00000208841.2, ENSMUST00000209047.2, ENSMUST00000209156.2
Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GACCACCGTATACACTTCAGGGTCTTCTTCATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGGAGCAGCCGGCGCATCCGCAGGGGC | + |
Preference number: 1 (lower is better) Translates to: DHRIHFRVFFIMEEF*SRKKGRSSRRIRRG Trigger: GCCCCTGCGGATGCGCCGGCTGCTCCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGATGAAGAAGACCCTGAAGTGTATACGGTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR GCA 90 bp | TGCCAGCTCAGCAGCAGTCCAGATGACTGGGTGGAAGAGGATCCCTaGCAGAAAGCCTTCCTCCACCCACACCCCTCTCCATTAGTCCCA | + |
Preference number: 1 (lower is better) Translates to: CQLSSSPDDWVEEDP*QKAFLHPHPSPLVP Trigger: TGGGACTAATGGAGAGGGGTGTGGGTGGAGGAAGGCTTTCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCTGAGCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR CCA 90 bp | GTGTGGAGCAGGGGTCAGGAAGCATGCATTCATGCCAAGGCAGCTTaGGACCTCAGGGGTGGCATTTGGCCTCTCTGGTCTGGTTCCTCA | + |
Preference number: 1 (lower is better) Translates to: VWSRGQEACIHAKAA*DLRGGIWPLWSGSS Trigger: TGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATGAATGCATGCTTCCTGACCCCTGCTCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR TCA 90 bp | CTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTTGCTACAGACTaGCTCTGGCTCCTCTCATCTCCTGCCTACATGGGGCAGCTTGCC | + |
Preference number: 1 (lower is better) Translates to: LTVSRKWHLDGFATD*LWLLSSPAYMGQLA Trigger: GGCAAGCTGCCCCATGTAGGCAGGAGATGAGAGGAGCCAGAGTCAGTCTGTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR CCA 90 bp | TGCTGGGTGAGTTTGGCAGCTACTCCAGGAAGTCAATCCAGGAGATaGGGTCCTGCCCATCCTGCTCTCCTGATGTCCCACCATCACACC | + |
Preference number: 1 (lower is better) Translates to: CWVSLAATPGSQSRR*GPAHPALLMSHHHT Trigger: GGTGTGATGGTGGGACATCAGGAGAGCAGGATGGGCAGGACCCCATCTCCTGGATTGACTTCCTGGAGTAGCTGCCAAACTCACCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 90 bp | GCATGCATTCATGCCAAGGCAGCTTGGGACCTCAGGGGTGGCATTTaGCCTCTCTGGTCTGGTTCCTCATTGGTGACAGGGGTTCCCATT | + |
Preference number: 1 (lower is better) Translates to: ACIHAKAAWDLRGGI*PLWSGSSLVTGVPI Trigger: AATGGGAACCCCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATGAATGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR TCA 90 bp | GTGGTGCCGACTAATGGTCTGCCAAAGCTACACCTTGGCTACTGCTaGGCAACCACAGAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTC | + |
Preference number: 1 (lower is better) Translates to: VVPTNGLPKLHLGYC*ATTEDESLSQPLSV Trigger: GACAGACAGAGGCTGGGACAAGGACTCATCCTCTGTGGTTGCTCAGCAGTAGCCAAGGTGTAGCTTTGGCAGACCATTAGTCGGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 90 bp | CCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTaGTGTCACCTGCACAGATGCAAGTGTGGGTGTTTGTGTAGCTTC | + |
Preference number: 1 (lower is better) Translates to: PGQHLCPVTPARKPL*CHLHRCKCGCLCSF Trigger: GAAGCTACACAAACACCCACACTTGCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR GCA 90 bp | GTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTaGTCTGGCTTCCAGCAGGATGATGGTGAGGAGGCCATCAAACAC | + |
Preference number: 1 (lower is better) Translates to: VFISRVMSQSDSGPY*SGFQQDDGEEAIKH Trigger: GTGTTTGATGGCCTCCTCACCATCATCCTGCTGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR CCA 90 bp | ACCACAGAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTaGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGT | + |
Preference number: 1 (lower is better) Translates to: TTEDESLSQPLSVSE*SDPGTIFSCSASTS Trigger: ACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTCTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 90 bp | TCTTCTGGGAACATGAGAAAGGAGACAGGAAAGGTGATGAACCTTTaGTGGGAAGGTGTCAAGCAGGCAGGAGGGCCAGGGAGCCTCAGC | + |
Preference number: 1 (lower is better) Translates to: SSGNMRKETGKVMNL*WEGVKQAGGPGSLS Trigger: GCTGAGGCTCCCTGGCCCTCCTGCCTGCTTGACACCTTCCCATCAAAGGTTCATCACCTTTCCTGTCTCCTTTCTCATGTTCCCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR GCA 90 bp | AAAAGAGATGGGAGGGGTGAACAGCAAGCCAGGCAGACATGGGCCTaGAGCCAGGCAGAAGGCATCCATCTATACACACACAAGGGTGTA | + |
Preference number: 1 (lower is better) Translates to: KRDGRGEQQARQTWA*SQAEGIHLYTHKGV Trigger: TACACCCTTGTGTGTGTATAGATGGATGCCTTCTGCCTGGCTGCAGGCCCATGTCTGCCTGGCTTGCTGTTCACCCCTCCCATCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR GCA 90 bp | AATGGAGTCACTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTTaGTACAGACTGACTCTGGCTCCTCTCATCTCCTGCCTACATGGG | + |
Preference number: 1 (lower is better) Translates to: NGVTHSVTEVASGRV*YRLTLAPLISCLHG Trigger: CCCATGTAGGCAGGAGATGAGAGGAGCCAGAGTCAGTCTGTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAGTGACTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR GCA 90 bp | TCCTTGGGCTCTTCTAGGATATCCCATCATGCTGTGAGCATCTCTTaGCAGCTCAGCAGCAGTCCAGATGACTGGGTGGAAGAGGATCCC | + |
Preference number: 1 (lower is better) Translates to: SLGSSRISHHAVSIS*QLSSSPDDWVEEDP Trigger: GGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCTGAGCTGGCAAGAGATGCTCACAGCATGATGGGATATCCTAGAAGAGCCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR TCA 90 bp | AAGGTGTCAAGCAGGCAGGAGGGCCAGGGAGCCTCAGCCGTACACTaGAACAAAGCCCTTCTCTCTGAAGCTCCTTGTATCAGGCATTTT | + |
Preference number: 1 (lower is better) Translates to: KVSSRQEGQGASAVH*NKALLSEAPCIRHF Trigger: AAAATGCCTGATACAAGGAGCTTCAGAGAGAAGGGCTTTGTTTCAGTGTACGGCTGAGGCTCCCTGGCCCTCCTGCCTGCTTGACACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR CCA 90 bp | CTTGGAAGTCACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTTaGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCGACTA | + |
Preference number: 1 (lower is better) Translates to: LGSHSLSLASLTKTA*GSNKWRNVALWCRL Trigger: TAGTCGGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTGACTTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CCA 90 bp | GGAGAGCTGAGGCCTTCTTGCTTCCTGGCTTTGAGGAAGGACCCTTaGAAGTCACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTTG | + |
Preference number: 1 (lower is better) Translates to: GELRPSCFLALRKDP*KSLSLLSKSHQDSL Trigger: CAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 90 bp | GGTTTGAGTTTGCTGTCTCCTCAGGCCAGGGGTAGATATGCAGTCTaGACTTCTCCCACATTTCAGCACAGCAGAGTGACCCCGACTTCA | + |
Preference number: 1 (lower is better) Translates to: GLSLLSPQARGRYAV*TSPTFQHSRVTPTS Trigger: TGAAGTCGGGGTCACTCTGCTGTGCTGAAATGTGGGAGAAGTTCAGACTGCATATCTACCCCTGGCCTGAGGAGACAGCAAACTCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR GCA 90 bp | GTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTaGCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTG | + |
Preference number: 1 (lower is better) Translates to: VTFSTHDTNPNVLET*QLLSCTGLGSQMPL Trigger: CAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR GCA 90 bp | ATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGATGTCACCTaGACAGATGCAAGTGTGGGTGTTTGTGTAGCTTCTCCATCAGTT | + |
Preference number: 1 (lower is better) Translates to: ISVLSPQQGSHSDVT*TDASVGVCVASPSV Trigger: AACTGATGGAGAAGCTACACAAACACCCACACTTGCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR GCA 90 bp | CAGGAGGATAGACAGGAGGATAAACAGGAGGATAAACAGGACACGTaGTGGGTGAGTTTGGCAGCTACTCCAGGAAGTCAATCCAGGAGA | + |
Preference number: 1 (lower is better) Translates to: QEDRQEDKQEDKQDT*WVSLAATPGSQSRR Trigger: TCTCCTGGATTGACTTCCTGGAGTAGCTGCCAAACTCACCCAGCACGTGTCCTGTTTATCCTCCTGTTTATCCTCCTGTCTATCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR TCA 90 bp | CCAGGATCACCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTaGTCAAAGCAGCAGCAAAGTCGTCAAAGTTGTTGGGCCAGTAAC | + |
Preference number: 1 (lower is better) Translates to: PGSPANCSPPSRSTV*SKQQQSRQSCWASN Trigger: GTTACTGGCCCAACAACTTTGACGACTTTGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGGTGATCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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3UTR CCA 90 bp | TTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTaGGTATCAAGGAGAGCTGAGGCCTTCTTGCTTCCTGGCTTTGAG | + |
Preference number: 1 (lower is better) Translates to: LGSQMPLRLKAQISL*VSRRAEAFLLPGFE Trigger: CTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CCA 90 bp | CTTCTCACACACAGGCAGGCACACAAGCAAAGTCGTCAAAGTTGTTaGGCCAGTAACCTAGCTGCTCAAAGCTTCCACATACAGCTGAGT | + |
Preference number: 1 (lower is better) Translates to: LLTHRQAHKQSRQSC*ASNLAAQSFHIQLS Trigger: ACTCAGCTGTATGTGGAAGCTTTGAGCAGCTAGGTTACTGGCCCAACAACTTTGACGACTTTGCTTGTGTGCCTGCCTGTGTGTGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR-3UTR TCA 90 bp | CATGGGCCCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGCACCTTGGCTACTGCTaGGCAACCACAGAGGATGAG | + |
Preference number: 2 (lower is better) Translates to: HGPRPASLSCHPSKEATLHLGYC*ATTEDE Trigger: CTCATCCTCTGTGGTTGCTCAGCAGTAGCCAAGGTG...CAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGGGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | GGCCTGCCCAACCAAGTAGCCCTAAAAGAGATGGGAGGGGTGAACAGCAAGCCATCCCACCATCACACCTaGCTCCAGAGGTCAAGGCCC | + |
Preference number: 2 (lower is better) Translates to: GLPNQVALKEMGGVNSKPSHHHT*LQRSRP Trigger: GGGCCTTGACCTCTGGAGGCAGGTGTGATGGTGGGA...TGGCTTGCTGTTCACCCCTCCCATCTCTTTTAGGGCTACTTGGTTGGGCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR GCA 90 bp | TTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGCCAGCATCTGTGGAAGAGGATCCCTaGCAGAAAGCCTTCCTCCAC | + |
Preference number: 2 (lower is better) Translates to: LLCLDQLLPPQHGPRPASVEEDP*QKAFLH Trigger: GTGGAGGAAGGCTTTCTGGCAGGGATCCTCTTCCAC...AGATGCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | CCTAAAAGAGATGGGAGGGGTGAACAGCAAGCCAGGCAGACATGGGCCTGCAGCCATGCCAAGGCAGCTTaGGACCTCAGGGGTGGCATT | + |
Preference number: 2 (lower is better) Translates to: PKRDGRGEQQARQTWACSHAKAA*DLRGGI Trigger: AATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATG...GCTGCAGGCCCATGTCTGCCTGGCTTGCTGTTCACCCCTCCCATCTCTTTTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR CCA 90 bp | GGCAGACATGGGCCTGCAGCCAGGCAGAAGGCATCCATCTATACACACACAAGGGTGGGGAGCCTAGTGTaGAGCAGGGGTCAGGAAGCA | + |
Preference number: 2 (lower is better) Translates to: GRHGPAARQKASIYTHTRVGSLV*SRGQEA Trigger: TGCTTCCTGACCCCTGCTCCACACTAGGCTCCCCAC...CCTTGTGTGTGTATAGATGGATGCCTTCTGCCTGGCTGCAGGCCCATGTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR TCA 90 bp | GAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCGCAAGGAAGCCACTCTaGTGTCACCTGCACAGATGC | + |
Preference number: 2 (lower is better) Translates to: ESLSQPLSVSEWSDPGTIARKPL*CHLHRC Trigger: GCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGC...GATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR TCA 90 bp | GGGGCTCCTCACAAGCAAGGCTCAGCGAAACGATCCAGTCCACCACAGACACAAAGGACACGTGCTGGGTaGGTTTGGCAGCTACTCCAG | + |
Preference number: 2 (lower is better) Translates to: GAPHKQGSAKRSSPPQTQRTRAG*VWQLLQ Trigger: CTGGAGTAGCTGCCAAACTCACCCAGCACGTGTCCT...TTGTGTCTGTGGTGGACTGGATCGTTTCGCTGAGCCTTGCTTGTGAGGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR GCA 90 bp | CTCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCTCTGCCTCGACCAGTTaGTTCCTCCACAGCATGGGC | + |
Preference number: 2 (lower is better) Translates to: LTKTAWGSNKWRNVALWCSASTS*FLHSMG Trigger: GCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGA...GCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | TCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCTGTCGGGAACCAGGCTaGTGTTTCCAGGAGGCACGA | + |
Preference number: 2 (lower is better) Translates to: SPRQLGGATNGGMWPCGACREPG*CFQEAR Trigger: TCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACA...GGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | GGCAGACATGGGCCTGCAGCCAGGCAGAAGGCATCCATCTATACACACACAAGGCTCAGGGGTGGCATTTaGCCTCTCTGGTCTGGTTCC | + |
Preference number: 2 (lower is better) Translates to: GRHGPAARQKASIYTHTRLRGGI*PLWSGS Trigger: GGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAG...CCTTGTGTGTGTATAGATGGATGCCTTCTGCCTGGCTGCAGGCCCATGTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR TCA 90 bp | AGCAGCAGTCCAGATGACTGGGTGGAAGAGGATCCCTGCCAGAAAGCCTTCCTCGGTATCAAGGAGAGCTaGGGCCTTCTTGCTTCCTGG | + |
Preference number: 2 (lower is better) Translates to: SSSPDDWVEEDPCQKAFLGIKES*GLLASW Trigger: CCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACC...GAGGAAGGCTTTCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | ACGGGCCTGCGTAGCGCTTATAGGCTTCCAGGATCACCTGCCAATTGTTCACCATCTGCCTCGACCAGTTaGTTCCTCCACAGCATGGGC | + |
Preference number: 2 (lower is better) Translates to: TGLRSAYRLPGSPANCSPSASTS*FLHSMG Trigger: GCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGA...TGGTGAACAATTGGCAGGTGATCCTGGAAGCCTATAAGCGCTACGCAGGCCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | ACTGCTCTGGCTTCCAGCAGGATGATGGTGAGGAGGCCATCAAACACATTGCTAGTAGGACAGGTAGCCTaGCAGGCCCAGCGCGAACAC | + |
Preference number: 2 (lower is better) Translates to: TALASSRMMVRRPSNTLLVGQVA*QAQREH Trigger: GTGTTCGCGCTGGGCCTGCCAGGCTACCTGTCCTAC...TAGCAATGTGTTTGATGGCCTCCTCACCATCATCCTGCTGGAAGCCAGAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR-3UTR CCA 90 bp | CCTAAAAGAGATGGGAGGGGTGAACAGCAAGCCAGGCAGACATGGGCCTGCAGCTTGGCCTCTCTGGTCTaGTTCCTCATTGGTGACAGG | + |
Preference number: 2 (lower is better) Translates to: PKRDGRGEQQARQTWACSLASLV*FLIGDR Trigger: CCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAA...GCTGCAGGCCCATGTCTGCCTGGCTTGCTGTTCACCCCTCCCATCTCTTTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR TCA 90 bp | CTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGGTATCAAGGAGAGCTaGGGCCTTCTTGCTTCCTGG | + |
Preference number: 2 (lower is better) Translates to: LSLSGLTQAPSFLALPRPGIKES*GLLASW Trigger: CCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACC...TGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | CTGGAGACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGTCTGCCTCGACCAGTTaGTTCCTCCACAGCATGGGC | + |
Preference number: 2 (lower is better) Translates to: LETCQLLSCTGLGSQMPLSASTS*FLHSMG Trigger: GCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGA...CAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | AACAGCAAGCCAGGCAGACATGGGCCTGCAGCCAGGCAGAAGGCATCCATCTATAGGGGTCAGGAAGCATaGATTCATGCCAAGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: NSKPGRHGPAARQKASIYRGQEA*IHAKAA Trigger: AGCTGCCTTGGCATGAATGCATGCTTCCTGACCCCT...ATAGATGGATGCCTTCTGCCTGGCTGCAGGCCCATGTCTGCCTGGCTTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR CCA 90 bp | GGGGCTCCTCACAAGCAAGGCTCAGCGAAACGATCCAGTCCACCACAGACACAAGGCATTTGGCCTCTCTaGTCTGGTTCCTCATTGGTG | + |
Preference number: 2 (lower is better) Translates to: GAPHKQGSAKRSSPPQTQGIWPL*SGSSLV Trigger: CACCAATGAGGAACCAGACCAGAGAGGCCAAATGCC...TTGTGTCTGTGGTGGACTGGATCGTTTCGCTGAGCCTTGCTTGTGAGGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR CCA 90 bp | TCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCGTCCAGATGACTGGGTaGAAGAGGATCCCTGCCAGA | + |
Preference number: 2 (lower is better) Translates to: SQPLSVSEWSDPGTIFSCVQMTG*KRIPAR Trigger: TCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGAC...GCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR CAA 90 bp | CCTTGGAAGTCACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTaGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCGACT | + |
Preference number: 2 (lower is better) Translates to: PWKSLSLLSKSHQDS*GEQQMEECGPVVPT Trigger: AGTCGGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTGACTTCCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 90 bp | TGGGACCTCAGGGGTGGCATTTGGCCTCTCTGGTCTGGTTCCTCATaGGTGACAGGGGTTCCCATTAGCTTTGTCTATCTAAGCCACCTG | + |
Preference number: 2 (lower is better) Translates to: WDLRGGIWPLWSGSS*VTGVPISFVYLSHL Trigger: CAGGTGGCTTAGATAGACAAAGCTAATGGGAACCCCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CAA 90 bp | GAATGGAGTCACTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTaGCTACAGACTGACTCTGGCTCCTCTCATCTCCTGCCTACATGG | + |
Preference number: 2 (lower is better) Translates to: EWSHSQCHGSGIWTG*LQTDSGSSHLLPTW Trigger: CCATGTAGGCAGGAGATGAGAGGAGCCAGAGTCAGTCTGTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAGTGACTCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
||
3UTR-3UTR TCA 90 bp | TCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCCTTGCTTCCTGGCTTTaGGGAAGGACCCTTGGAAGT | + |
Preference number: 2 (lower is better) Translates to: SQPLSVSEWSDPGTIFSCLASWL*GRTLGS Trigger: ACTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAG...GCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | GACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGCTGTGAGCATCTCTTaGCAGCTCAGCAGCAGTCCA | + |
Preference number: 2 (lower is better) Translates to: DLPVTVLYRLGFTNATEAAVSIS*QLSSSP Trigger: TGGACTGCTGCTGAGCTGGCAAGAGATGCTCACAGC...AGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
||
3UTR-3UTR TCA 90 bp | TCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGTCCTGTAGCAACCACAGAGGATaGGTCCTTGTCCCAGCCTCT | + |
Preference number: 2 (lower is better) Translates to: STHDTNPNVLETCQLLSCSNHRG*VLVPAS Trigger: AGAGGCTGGGACAAGGACTCATCCTCTGTGGTTGCT...ACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | TCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTGCCGACTAATGGTCTaGCAAAGCTACACCTTGGCT | + |
Preference number: 2 (lower is better) Translates to: SLSQPLSVSEWSDPGTIFCRLMV*QSYTLA Trigger: AGCCAAGGTGTAGCTTTGGCAGACCATTAGTCGGCA...AAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | GACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAGCTGAGGCCTTCTTaGTTCCTGGCTTTGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: DLPVTVLYRLGFTNATEAELRPS*FLALRK Trigger: CTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTC...AGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | GGCAGAAGGCATCCATCTATACACACACAAGGGTGTATACACAGAGTGAGGAGTGGGTCCTGCCCATCCTaGTCTCCTGATGTCCCACCA | + |
Preference number: 2 (lower is better) Translates to: GRRHPSIHTQGCIHRVRSGSCPS*SPDVPP Trigger: TGGTGGGACATCAGGAGAGCAGGATGGGCAGGACCC...ACTCCTCACTCTGTGTATACACCCTTGTGTGTGTATAGATGGATGCCTTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR TCA 90 bp | GTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTAAGCAACCACAGAGGATaGGTCCTTGTCCCAGCCTCT | + |
Preference number: 2 (lower is better) Translates to: VTFSTHDTNPNVLETCQLSNHRG*VLVPAS Trigger: AGAGGCTGGGACAAGGACTCATCCTCTGTGGTTGCT...TAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR TCA 90 bp | ACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCAGACATTCTCTACACATaGCACCAACCCCAATGTCCT | + |
Preference number: 2 (lower is better) Translates to: TQAPSFLALPRPVASSTADILYT*HQPQCP Trigger: AGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTC...TGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR TCA 90 bp | CTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGACATTCTCTACACATaGCACCAACCCCAATGTCCT | + |
Preference number: 2 (lower is better) Translates to: LSLSGLTQAPSFLALPRPDILYT*HQPQCP Trigger: AGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTC...TGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | CTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCTGTCGGGAACCAGGCTaGTGTTTCCAGGAGGCACGA | + |
Preference number: 2 (lower is better) Translates to: LGFTNATEAEGTDKFVGICREPG*CFQEAR Trigger: TCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACA...GATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | AAAGAGGTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCTGGGGGAGCAACAAATaGAGGAATGTGGCCCTGTGG | + |
Preference number: 2 (lower is better) Translates to: KEVTFSTHDTNPNVLETCWGSNK*RNVALW Trigger: CCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCA...GCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | GTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTATGGGGGAGCAACAAATaGAGGAATGTGGCCCTGTGG | + |
Preference number: 2 (lower is better) Translates to: VTFSTHDTNPNVLETCQLWGSNK*RNVALW Trigger: CCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCA...TAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 90 bp | GTTTGTGGGTATCAAGGAGAGCTGAGGCCTTCTTGCTTCCTGGCTTaGAGGAAGGACCCTTGGAAGTCACTCTCTCTCCTTAGCAAGTCT | + |
Preference number: 2 (lower is better) Translates to: VCGYQGELRPSCFLA*RKDPWKSLSLLSKS Trigger: AGACTTGCTAAGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACCCACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR TCA 90 bp | ATGACCTTGAGGGTCCCATCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAACACCTTGGCTACTGCTaGGCAACCACAGAGGATGAG | + |
Preference number: 2 (lower is better) Translates to: MTLRVPSVEKVLQKKSQKHLGYC*ATTEDE Trigger: CTCATCCTCTGTGGTTGCTCAGCAGTAGCCAAGGTG...TTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGATGGGACCCTCAAGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | AAAGAGGTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCGAGCTGAGGCCTTCTTaGTTCCTGGCTTTGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: KEVTFSTHDTNPNVLETCELRPS*FLALRK Trigger: CTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTC...GCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | TTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGCAAAGTCGTCAAAGGACAGTGGGCCATACTaGTCTGGCTTCCAGCAGGAT | + |
Preference number: 2 (lower is better) Translates to: FTTITFHSVIKAAAKSSKDSGPY*SGFQQD Trigger: ATCCTGCTGGAAGCCAGAGCAGTATGGCCCACTGTC...CTTTGACGACTTTGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR-3UTR GCA 90 bp | GGAAGTGGCATCTGGACGGGTTTGCTACAGACTGACTCTGGCTCCTCTCATCTCCAGAAATCATGTGGATaGACTTCTCACACACAGGCA | + |
Preference number: 2 (lower is better) Translates to: GSGIWTGLLQTDSGSSHLQKSCG*TSHTQA Trigger: TGCCTGTGTGTGAGAAGTGCATCCACATGATTTCTG...GAGATGAGAGGAGCCAGAGTCAGTCTGTAGCAAACCCGTCCAGATGCCACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR-3UTR CCA 90 bp | AAAGAGGTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCTCACCAAGACAGCTTaGGGGAGCAACAAATGGAGG | + |
Preference number: 2 (lower is better) Translates to: KEVTFSTHDTNPNVLETCLTKTA*GSNKWR Trigger: CCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAG...GCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | AGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTCTCACCAAGACAGCTTaGGGGAGCAACAAATGGAGG | + |
Preference number: 2 (lower is better) Translates to: RLGFTNATEAEGTDKFVGLTKTA*GSNKWR Trigger: CCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAG...ACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | TCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTGCACAGATAAGTTTGTaGGTATCAAGGAGAGCTGAG | + |
Preference number: 2 (lower is better) Translates to: SLSQPLSVSEWSDPGTIFAQISL*VSRRAE Trigger: CTCAGCTCTCCTTGATACCCACAAACTTATCTGTGC...AAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CCA 90 bp | TTTATGTTGGGGATGATGCGCAGGAAGCGAAACACAATCAGTGTGTTCATCAGTGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTT | + |
Preference number: 2 (lower is better) Translates to: FMLGMMRRKRNTISVFISVPERQ*AILLWL Trigger: AAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGAC...ACTGATGAACACACTGATTGTGTTTCGCTTCCTGCGCATCATCCCCAACATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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3UTR-3UTR TCA 90 bp | ACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGTCCTGTACATCACATCCACAGCACTaGAACAAAGAGGTGACATTC | + |
Preference number: 2 (lower is better) Translates to: THDTNPNVLETCQLLSCTSHPQH*NKEVTF Trigger: GAATGTCACCTCTTTGTTTCAGTGCTGTGGATGTGA...TGTACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | CTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCTGCCGACTAATGGTCTaGCAAAGCTACACCTTGGCT | + |
Preference number: 2 (lower is better) Translates to: LGFTNATEAEGTDKFVGICRLMV*QSYTLA Trigger: AGCCAAGGTGTAGCTTTGGCAGACCATTAGTCGGCA...GATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | ATGACCTTGAGGGTCCCATCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAAGCTTCCAGGATCACCTaGCAATTGTTCACCACCATC | + |
Preference number: 2 (lower is better) Translates to: MTLRVPSVEKVLQKKSQKASRIT*QLFTTI Trigger: GATGGTGGTGAACAATTGGCAGGTGATCCTGGAAGC...TTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGATGGGACCCTCAAGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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3UTR-3UTR CCA 90 bp | AGGCTGAAGGCACAGATAAGTTTGTGGGTATCAAGGAGAGCTGAGGCCTTCTTGTTGAGGAAGGACCCTTaGAAGTCACTCTCTCTCCTT | + |
Preference number: 2 (lower is better) Translates to: RLKAQISLWVSRRAEAFLLRKDP*KSLSLL Trigger: AAGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAA...CAAGAAGGCCTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR TCA 90 bp | GACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTACTGAAACAAAGAGGTaGCATTCTCTACACATGACA | + |
Preference number: 2 (lower is better) Translates to: DLPVTVLYRLGFTNATEATETKR*HSLHMT Trigger: TGTCATGTGTAGAGAATGTCACCTCTTTGTTTCAGT...AGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR TCA 90 bp | ATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCAAGGAGAGCTGAGTCACATCCACAGCACTaGAACAAAGAGGTGACATTC | + |
Preference number: 2 (lower is better) Translates to: MPLRLKAQISLWVSRRAESHPQH*NKEVTF Trigger: GAATGTCACCTCTTTGTTTCAGTGCTGTGGATGTGA...CTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 90 bp | TCCCATCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTaGATCCAGATAACAGAGGACACCAGCCACCATAGCACAAAATAC | + |
Preference number: 2 (lower is better) Translates to: SHLWRKFSRRRARNR*IQITEDTSHHSTKY Trigger: GTATTTTGTGCTATGGTGGCTGGTGTCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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3UTR-3UTR TCA 90 bp | TCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGTCCTGTACTGAAACAAAGAGGTaGCATTCTCTACACATGACA | + |
Preference number: 2 (lower is better) Translates to: STHDTNPNVLETCQLLSCTETKR*HSLHMT Trigger: TGTCATGTGTAGAGAATGTCACCTCTTTGTTTCAGT...ACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR GCA 90 bp | TCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACGGCCATCAAACACATTaGTATGGTAGGACAGGTAGC | + |
Preference number: 2 (lower is better) Translates to: SVEKVLQKKSQKQVDPDNGHQTH*YGRTGS Trigger: GCTACCTGTCCTACCATAGCAATGTGTTTGATGGCC...GTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR-3UTR TCA 90 bp | TCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACGCAGGTAGTACAAGATaGAGATGTAGTCAAGAATCT | + |
Preference number: 2 (lower is better) Translates to: SVEKVLQKKSQKQVDPDNAGSTR*RCSQES Trigger: AGATTCTTGACTACATCTTCATCTTGTACTACCTGC...GTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR GCA 72 bp | AGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTaGTCTGGCTTCCAGCAGGATGATGGTGAGGAGGCC | + |
Preference number: 3 (lower is better) Translates to: SRVMSQSDSGPY*SGFQQDDGEEA Trigger: GGCCTCCTCACCATCATCCTGCTGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR GCA 72 bp | AGCAGCAGTCCAGATGACTGGGTGGAAGAGGATCCCTaGCAGAAAGCCTTCCTCCACCCACACCCCTCTCCA | + |
Preference number: 3 (lower is better) Translates to: SSSPDDWVEEDP*QKAFLHPHPSP Trigger: TGGAGAGGGGTGTGGGTGGAGGAAGGCTTTCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR CCA 72 bp | CATGCCAAGGCAGCTTGGGACCTCAGGGGTGGCATTTaGCCTCTCTGGTCTGGTTCCTCATTGGTGACAGGG | + |
Preference number: 3 (lower is better) Translates to: HAKAAWDLRGGI*PLWSGSSLVTG Trigger: CCCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 72 bp | CAGACTGACTCTGGCTCCTCTCATCTCCTGCCTACATaGGGCAGCTTGCCGCTGTCTGTAACTCCAGCTCCG | + |
Preference number: 3 (lower is better) Translates to: QTDSGSSHLLPT*GSLPLSVTPAP Trigger: CGGAGCTGGAGTTACAGACAGCGGCAAGCTGCCCCATGTAGGCAGGAGATGAGAGGAGCCAGAGTCAGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR-3UTR CAA 90 bp | CACCCACACCCCTCTCCATTAGTCCCATGGACTGGAGACACGCCCAAGCCCACAACAGAGGATGAGTCCTaGTCCCAGCCTCTGTCTGTC | + |
Preference number: 3 (lower is better) Translates to: HPHPSPLVPWTGDTPKPTTEDES*SQPLSV Trigger: GACAGACAGAGGCTGGGACAAGGACTCATCCTCTGT...TGTGGGCTTGGGCGTGTCTCCAGTCCATGGGACTAATGGAGAGGGGTGTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR-3UTR CAA 90 bp | GTCAAGCAGGCAGGAGGGCCAGGGAGCCTCAGCCGTACACTGAAACAAAGCCCTGCCATTGGCTTTATGTaGGGGATGATGCGCAGGAAG | + |
Preference number: 3 (lower is better) Translates to: VKQAGGPGSLSRTLKQSPAIGFM*GMMRRK Trigger: CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGC...AGGGCTTTGTTTCAGTGTACGGCTGAGGCTCCCTGGCCCTCCTGCCTGCTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR GCA 72 bp | AGGAAGTCAATCCAGGAGATGGGGTCCTGCCCATCCTaGTCTCCTGATGTCCCACCATCACACCTGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: RKSIQEMGSCPS*SPDVPPSHLPP Trigger: TGGAGGCAGGTGTGATGGTGGGACATCAGGAGAGCAGGATGGGCAGGACCCCATCTCCTGGATTGACTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR GCA 72 bp | CCTAGTGTGGAGCAGGGGTCAGGAAGCATGCATTCATaGCAAGGCAGCTTGGGACCTCAGGGGTGGCATTTG | + |
Preference number: 3 (lower is better) Translates to: PSVEQGSGSMHS*QGSLGPQGWHL Trigger: CAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATGAATGCATGCTTCCTGACCCCTGCTCCACACTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 72 bp | GCAGCTTGGGACCTCAGGGGTGGCATTTGGCCTCTCTaGTCTGGTTCCTCATTGGTGACAGGGGTTCCCATT | + |
Preference number: 3 (lower is better) Translates to: AAWDLRGGIWPL*SGSSLVTGVPI Trigger: AATGGGAACCCCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 72 bp | AGGGGTCAGGAAGCATGCATTCATGCCAAGGCAGCTTaGGACCTCAGGGGTGGCATTTGGCCTCTCTGGTCT | + |
Preference number: 3 (lower is better) Translates to: RGQEACIHAKAA*DLRGGIWPLWS Trigger: AGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATGAATGCATGCTTCCTGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 72 bp | TCTCTTGCCAGCTCAGCAGCAGTCCAGATGACTGGGTaGAAGAGGATCCCTGCCAGAAAGCCTTCCTCCACC | + |
Preference number: 3 (lower is better) Translates to: SLASSAAVQMTG*KRIPARKPSST Trigger: GGTGGAGGAAGGCTTTCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCTGAGCTGGCAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR-3UTR CAA 90 bp | CATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGACAGAGGATGAGTCCTaGTCCCAGCCTCTGTCTGTC | + |
Preference number: 3 (lower is better) Translates to: HLFLLCLDQLLPPQHGPRTEDES*SQPLSV Trigger: GACAGACAGAGGCTGGGACAAGGACTCATCCTCTGT...CCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CAA 90 bp | GGCAGACATGGGCCTGCAGCCAGGCAGAAGGCATCCATCTATACACACACAAGGACGTGCTGGGTGAGTTaGGCAGCTACTCCAGGAAGT | + |
Preference number: 3 (lower is better) Translates to: GRHGPAARQKASIYTHTRTCWVS*AATPGS Trigger: ACTTCCTGGAGTAGCTGCCAAACTCACCCAGCACGT...CCTTGTGTGTGTATAGATGGATGCCTTCTGCCTGGCTGCAGGCCCATGTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
3UTR TCA 72 bp | AGCAGGCAGGAGGGCCAGGGAGCCTCAGCCGTACACTaGAACAAAGCCCTTCTCTCTGAAGCTCCTTGTATC | + |
Preference number: 3 (lower is better) Translates to: SRQEGQGASAVH*NKALLSEAPCI Trigger: GATACAAGGAGCTTCAGAGAGAAGGGCTTTGTTTCAGTGTACGGCTGAGGCTCCCTGGCCCTCCTGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
||
3UTR GCA 72 bp | AGCTACTCCAGGAAGTCAATCCAGGAGATGGGGTCCTaGCCATCCTGCTCTCCTGATGTCCCACCATCACAC | + |
Preference number: 3 (lower is better) Translates to: SYSRKSIQEMGS*PSCSPDVPPSH Trigger: GTGTGATGGTGGGACATCAGGAGAGCAGGATGGGCAGGACCCCATCTCCTGGATTGACTTCCTGGAGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
3UTR CCA 72 bp | TGTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTTCCTGGGCACAGTGAG | + |
Preference number: 3 (lower is better) Translates to: CVHQSCHVPERQ*AILLWLPGHSE Trigger: CTCACTGTGCCCAGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
||
3UTR CCA 72 bp | AGTTTGGCAGCTACTCCAGGAAGTCAATCCAGGAGATaGGGTCCTGCCCATCCTGCTCTCCTGATGTCCCAC | + |
Preference number: 3 (lower is better) Translates to: SLAATPGSQSRR*GPAHPALLMSH Trigger: GTGGGACATCAGGAGAGCAGGATGGGCAGGACCCCATCTCCTGGATTGACTTCCTGGAGTAGCTGCCAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
3UTR CCA 72 bp | AGCATCTCTTGCCAGCTCAGCAGCAGTCCAGATGACTaGGTGGAAGAGGATCCCTGCCAGAAAGCCTTCCTC | + |
Preference number: 3 (lower is better) Translates to: SISCQLSSSPDD*VEEDPCQKAFL Trigger: GAGGAAGGCTTTCTGGCAGGGATCCTCTTCCACCCAGTCATCTGGACTGCTGCTGAGCTGGCAAGAGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | ACGGGCCTGCGTAGCGCTTATAGGCTTCCAGGATCACCTGCCAATTGTTCACCAACAGAGGATGAGTCCTaGTCCCAGCCTCTGTCTGTC | + |
Preference number: 3 (lower is better) Translates to: TGLRSAYRLPGSPANCSPTEDES*SQPLSV Trigger: GACAGACAGAGGCTGGGACAAGGACTCATCCTCTGT...TGGTGAACAATTGGCAGGTGATCCTGGAAGCCTATAAGCGCTACGCAGGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | TCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCTCTCACCAAGACAGCTaGGGGGAGCAACAAATGGAG | + |
Preference number: 3 (lower is better) Translates to: SPRQLGGATNGGMWPCGASHQDS*GEQQME Trigger: CTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGA...GGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | GAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCTTTGAGGAAGGACCCTaGGAAGTCACTCTCTCTCCT | + |
Preference number: 3 (lower is better) Translates to: EDESLSQPLSVSEWSDPGFEEGP*EVTLSP Trigger: AGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAAA...GCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | AGGAATGGAGTCACTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTTGCTACCCTACATGGGGCAGCTaGCCGCTGTCTGTAACTCCA | + |
Preference number: 3 (lower is better) Translates to: RNGVTHSVTEVASGRVCYPTWGS*PLSVTP Trigger: TGGAGTTACAGACAGCGGCAAGCTGCCCCATGTAGG...GTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAGTGACTCCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
||
3UTR TCA 72 bp | CCCACCCCCGGGACACCCCCATCACATCCACAGCACTaGAACAAAGAGGTGACATTCTCTACACATGACACC | + |
Preference number: 3 (lower is better) Translates to: PTPGTPPSHPQH*NKEVTFSTHDT Trigger: GGTGTCATGTGTAGAGAATGTCACCTCTTTGTTTCAGTGCTGTGGATGTGATGGGGGTGTCCCGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR GCA 72 bp | GTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTaGTCTGCCTCGACCAGTTGCTTCCTCCACAGCATG | + |
Preference number: 3 (lower is better) Translates to: VSEWSDPGTIFS*SASTSCFLHSM Trigger: CATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR GCA 72 bp | ATACACTTCAGGGTCTTCTTCATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGGAGCAGCCGGCGCATC | + |
Preference number: 3 (lower is better) Translates to: IHFRVFFIMEEF*SRKKGRSSRRI Trigger: GATGCGCCGGCTGCTCCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGATGAAGAAGACCCTGAAGTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
3UTR CCA 72 bp | GATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTaGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCC | + |
Preference number: 3 (lower is better) Translates to: DESLSQPLSVSE*SDPGTIFSCSA Trigger: GGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR CCA 72 bp | GCAAGTCTCACCAAGACAGCTTGGGGGAGCAACAAATaGAGGAATGTGGCCCTGTGGTGCCGACTAATGGTC | + |
Preference number: 3 (lower is better) Translates to: ASLTKTAWGSNK*RNVALWCRLMV Trigger: GACCATTAGTCGGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGACTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR CCA 72 bp | GCCATCAAACACATTGCTATGGTAGGACAGGTAGCCTaGCAGGCCCAGCGCGAACACCTTAAACAGCAGCTC | + |
Preference number: 3 (lower is better) Translates to: AIKHIAMVGQVA*QAQREHLKQQL Trigger: GAGCTGCTGTTTAAGGTGTTCGCGCTGGGCCTGCCAGGCTACCTGTCCTACCATAGCAATGTGTTTGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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3UTR-3UTR CAA 90 bp | TCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTTCCTGGCTTaGAGGAAGGACCCTTGGAAG | + |
Preference number: 3 (lower is better) Translates to: SLSQPLSVSEWSDPGTIFSCFLA*RKDPWK Trigger: CTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGA...AAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR TCA 72 bp | CATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTaGTGTCACCTGCACAGATGCAAGTGTGGGTGTTTG | + |
Preference number: 3 (lower is better) Translates to: HLCPVTPARKPL*CHLHRCKCGCL Trigger: CAAACACCCACACTTGCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR CCA 72 bp | CACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTTaGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGG | + |
Preference number: 3 (lower is better) Translates to: HSLSLASLTKTA*GSNKWRNVALW Trigger: CCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | TCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTTTGAGGAAGGACCCTaGGAAGTCACTCTCTCTCCT | + |
Preference number: 3 (lower is better) Translates to: SQPLSVSEWSDPGTIFSCFEEGP*EVTLSP Trigger: AGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAAA...GCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR TCA 72 bp | ACTAATGGTCTGCCAAAGCTACACCTTGGCTACTGCTaGGCAACCACAGAGGATGAGTCCTTGTCCCAGCCT | + |
Preference number: 3 (lower is better) Translates to: TNGLPKLHLGYC*ATTEDESLSQP Trigger: AGGCTGGGACAAGGACTCATCCTCTGTGGTTGCTCAGCAGTAGCCAAGGTGTAGCTTTGGCAGACCATTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 72 bp | TTTAGCCTGAAGTGGGCTTCCGGGAGGGGATCCCATTaGGAGTCGAGGAGTATCTGTATATTCCAGGAAGGG | + |
Preference number: 3 (lower is better) Translates to: FSLKWASGRGSH*ESRSICIFQEG Trigger: CCCTTCCTGGAATATACAGATACTCCTCGACTCTCAATGGGATCCCCTCCCGGAAGCCCACTTCAGGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
||
3UTR TCA 72 bp | TTGCTGTCTCCTCAGGCCAGGGGTAGATATGCAGTCTaGACTTCTCCCACATTTCAGCACAGCAGAGTGACC | + |
Preference number: 3 (lower is better) Translates to: LLSPQARGRYAV*TSPTFQHSRVT Trigger: GGTCACTCTGCTGTGCTGAAATGTGGGAGAAGTTCAGACTGCATATCTACCCCTGGCCTGAGGAGACAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
||
3UTR GCA 72 bp | CTGTCACCCCAGCAAGGAAGCCACTCTGATGTCACCTaGACAGATGCAAGTGTGGGTGTTTGTGTAGCTTCT | + |
Preference number: 3 (lower is better) Translates to: LSPQQGSHSDVT*TDASVGVCVAS Trigger: AGAAGCTACACAAACACCCACACTTGCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGCTGGGGTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | ACCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGCATCTCACCAAGACAGCTaGGGGGAGCAACAAATGGAG | + |
Preference number: 3 (lower is better) Translates to: TCQLFTTITFHSVIKAAASHQDS*GEQQME Trigger: CTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGA...TGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR-3UTR CAA 90 bp | ACCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGCAGCCATTGGCTTTATGTaGGGGATGATGCGCAGGAAG | + |
Preference number: 3 (lower is better) Translates to: TCQLFTTITFHSVIKAAAAIGFM*GMMRRK Trigger: CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGC...TGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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3UTR GCA 72 bp | TCTACACATGACACCAACCCCAATGTCCTGGAGACCTaGCAGTTACTGTCCTGTACAGGCTTGGGTTCACAA | + |
Preference number: 3 (lower is better) Translates to: STHDTNPNVLET*QLLSCTGLGSQ Trigger: TTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR GCA 72 bp | TCTTCTAGGATATCCCATCATGCTGTGAGCATCTCTTaGCAGCTCAGCAGCAGTCCAGATGACTGGGTGGAA | + |
Preference number: 3 (lower is better) Translates to: SSRISHHAVSIS*QLSSSPDDWVE Trigger: TTCCACCCAGTCATCTGGACTGCTGCTGAGCTGGCAAGAGATGCTCACAGCATGATGGGATATCCTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
||
3UTR CCA 72 bp | CAGGAGGATAAACAGGAGGATAAACAGGACACGTGCTaGGTGAGTTTGGCAGCTACTCCAGGAAGTCAATCC | + |
Preference number: 3 (lower is better) Translates to: QEDKQEDKQDTC*VSLAATPGSQS Trigger: GGATTGACTTCCTGGAGTAGCTGCCAAACTCACCCAGCACGTGTCCTGTTTATCCTCCTGTTTATCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR-3UTR CAA 90 bp | CTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCTCTTGCTTCCTGGCTTaGAGGAAGGACCCTTGGAAG | + |
Preference number: 3 (lower is better) Translates to: LGFTNATEAEGTDKFVGISCFLA*RKDPWK Trigger: CTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGA...GATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CAA 90 bp | TCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGTCCTGTAGAGCCAGAAACAGGTaGATCCAGATAACAGAGGAC | + |
Preference number: 3 (lower is better) Translates to: STHDTNPNVLETCQLLSCRARNR*IQITED Trigger: GTCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCT...ACAGGACAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 72 bp | CACCCCCATCACATCCACAGCACTGAAACAAAGAGGTaGCATTCTCTACACATGACACCAACCCCAATGTCC | + |
Preference number: 3 (lower is better) Translates to: HPHHIHSTETKR*HSLHMTPTPMS Trigger: GGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTTGTTTCAGTGCTGTGGATGTGATGGGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
3UTR TCA 72 bp | AGGATAAACAGGAGGATAAACAGGACACGTGCTGGGTaGGTTTGGCAGCTACTCCAGGAAGTCAATCCAGGA | + |
Preference number: 3 (lower is better) Translates to: RINRRINRTRAG*VWQLLQEVNPG Trigger: TCCTGGATTGACTTCCTGGAGTAGCTGCCAAACTCACCCAGCACGTGTCCTGTTTATCCTCCTGTTTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
3UTR TCA 72 bp | ATCCATCTATACACACACAAGGGTGTATACACAGAGTaGGGAGTTCCAACAGTCCGGTCCCCACGCACTACT | + |
Preference number: 3 (lower is better) Translates to: IHLYTHKGVYTE*GVPTVRSPRTT Trigger: AGTAGTGCGTGGGGACCGGACTGTTGGAACTCCTCACTCTGTGTATACACCCTTGTGTGTGTATAGATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR GCA 72 bp | GAACAGGTTGATCCCGATCATGGCAAACACATAGTATaGCACCACCAGGATCCCACCAAATGCCCTCAAGTT | + |
Preference number: 3 (lower is better) Translates to: EQVDPDHGKHIV*HHQDPTKCPQV Trigger: AACTTGAGGGCATTTGGTGGGATCCTGGTGGTGGCATACTATGTGTTTGCCATGATCGGGATCAACCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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3UTR GCA 72 bp | AGACAGGAGGATAAACAGGAGGATAAACAGGACACGTaGTGGGTGAGTTTGGCAGCTACTCCAGGAAGTCAA | + |
Preference number: 3 (lower is better) Translates to: RQEDKQEDKQDT*WVSLAATPGSQ Trigger: TTGACTTCCTGGAGTAGCTGCCAAACTCACCCAGCACGTGTCCTGTTTATCCTCCTGTTTATCCTCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CCA 72 bp | CAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTaGGTATCAAGGAGAGCTGAGGCCTTCTTGCTTCCT | + |
Preference number: 3 (lower is better) Translates to: QMPLRLKAQISL*VSRRAEAFLLP Trigger: AGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CCA 72 bp | GTATCTGTATATTCCAGGAAGGGGGAATTCCCATTCTaGCCAGGCTTCAGGAATGGAGTCACTCACAGTGTC | + |
Preference number: 3 (lower is better) Translates to: VSVYSRKGEFPF*PGFRNGVTHSV Trigger: GACACTGTGAGTGACTCCATTCCTGAAGCCTGGCCAGAATGGGAATTCCCCCTTCCTGGAATATACAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR-3UTR CAA 90 bp | TGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGAGGATCACCTGCCAATaGTTCACCACCATCACGTTC | + |
Preference number: 3 (lower is better) Translates to: CTGLGSQMPLRLKAQISLRITCQ*FTTITF Trigger: GAACGTGATGGTGGTGAACAATTGGCAGGTGATCCT...CAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR-3UTR CAA 90 bp | ATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCAAGGAGAGCTGAGAGAGCCAGAAACAGGTaGATCCAGATAACAGAGGAC | + |
Preference number: 3 (lower is better) Translates to: MPLRLKAQISLWVSRRAERARNR*IQITED Trigger: GTCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCT...CTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 72 bp | ACAGCACTGAAACAAAGAGGTGACATTCTCTACACATaGCACCAACCCCAATGTCCTGGAGACCTGCCAGTT | + |
Preference number: 3 (lower is better) Translates to: TALKQRGDILYT*HQPQCPGDLPV Trigger: AACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTTGTTTCAGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR TCA 72 bp | CCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTaGTCAAAGCAGCAGCAAAGTCGTCAAAGTTGTTGG | + |
Preference number: 3 (lower is better) Translates to: PANCSPPSRSTV*SKQQQSRQSCW Trigger: CCAACAACTTTGACGACTTTGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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3UTR TCA 72 bp | AGCCTCAGCCGTACACTGAAACAAAGCCCTTCTCTCTaGAGCTCCTTGTATCAGGCATTTTGTCTGAACATG | + |
Preference number: 3 (lower is better) Translates to: SLSRTLKQSPSL*SSLYQAFCLNM Trigger: CATGTTCAGACAAAATGCCTGATACAAGGAGCTTCAGAGAGAAGGGCTTTGTTTCAGTGTACGGCTGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | AGCAGGAAGAAGGGGCGGAGCAGCCGGCGCATCCGCAGGGGCTCCTCACAAGCATCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAG | + |
Preference number: 4 (lower is better) Translates to: SRKKGRSSRRIRRGSSQASMQSS*SAAAPE Trigger: CTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGA...TGCTTGTGAGGAGCCCCTGCGGATGCGCCGGCTGCTCCGCCCCTTCTTCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
CDS-3UTR CCA 90 bp | TGGGCCCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGATCAGCTGGCCCGGCCCTaGAGGCGAGGACTTCGTAGG | + |
Preference number: 4 (lower is better) Translates to: WAQASISVLSPQQGSHSDQLARP*RRGLRR Trigger: CCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTG...ATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
CDS-3UTR CCA 90 bp | GAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCCAGCTGGCCCGGCCCTaGAGGCGAGGACTTCGTAGG | + |
Preference number: 4 (lower is better) Translates to: EDESLSQPLSVSEWSDPGQLARP*RRGLRR Trigger: CCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTG...GCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGAGTGGACCTGGCCACTaGCTCGGTCCCGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPSGPGH*LGPGPE Trigger: TTCTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACT...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
||
CDS-3UTR GCA 90 bp | CACGCACTACTGGTGGGGAGCCTAGTGTGGAGCAGGGGTCAGGAAGCATGCATTAGTGGACCTGGCCACTaGCTCGGTCCCGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: HALLVGSLVWSRGQEACISGPGH*LGPGPE Trigger: TTCTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACT...AATGCATGCTTCCTGACCCCTGCTCCACACTAGGCTCCCCACCAGTAGTGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
||
CDS-3UTR CCA 90 bp | CATGGGCCCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGAGAGACACAGGTGGATaGCCAGCAGCAGCCCGACAC | + |
Preference number: 4 (lower is better) Translates to: HGPRPASLSCHPSKEATLRDTGG*PAAARH Trigger: GTGTCGGGCTGCTGCTGGCCATCCACCTGTGTCTCT...CAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGGGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
||
CDS-3UTR CCA 90 bp | TTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGCCAGCGTAGGACAGGTAGCCTaGCAGGCCCAGCGCGAACAC | + |
Preference number: 4 (lower is better) Translates to: FLALPRPVASSTAWAQASVGQVA*QAQREH Trigger: GTGTTCGCGCTGGGCCTGCCAGGCTACCTGTCCTAC...GCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | TTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGCCAGCATCTGTAGGACAGGTAGCCTaGCAGGCCCAGCGCGAACAC | + |
Preference number: 4 (lower is better) Translates to: LLCLDQLLPPQHGPRPASVGQVA*QAQREH Trigger: GTGTTCGCGCTGGGCCTGCCAGGCTACCTGTCCTAC...AGATGCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | GGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATAGTGGACCTGGCCACTaGCTCGGTCCCGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: GNQAAVSRRHDDTSEQVDSGPGH*LGPGPE Trigger: TTCTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACT...ATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | GAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGTCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAG | + |
Preference number: 4 (lower is better) Translates to: ELLSGTRLLFPGGTMTPRSMQSS*SAAAPE Trigger: CTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGA...CCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | CTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCCACAAGTGGACCTGGCCACTaGCTCGGTCCCGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LTQAPSFLALPRPVASSTSGPGH*LGPGPE Trigger: TTCTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACT...TGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCAGAGACACAGGTGGATaGCCAGCAGCAGCCCGACAC | + |
Preference number: 4 (lower is better) Translates to: EDESLSQPLSVSEWSDPGRDTGG*PAAARH Trigger: GTGTCGGGCTGCTGCTGGCCATCCACCTGTGTCTCT...GCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | CGTGTCATGTCCCAGAGCGACAGTGGGCCATACTGCTCTGGCTTCCAGCAGGATAGAGACACAGGTGGATaGCCAGCAGCAGCCCGACAC | + |
Preference number: 4 (lower is better) Translates to: RVMSQSDSGPYCSGFQQDRDTGG*PAAARH Trigger: GTGTCGGGCTGCTGCTGGCCATCCACCTGTGTCTCT...ATCCTGCTGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | TTCCACATACAGCTGAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACAGCTGGCCCGGCCCTaGAGGCGAGGACTTCGTAGG | + |
Preference number: 4 (lower is better) Translates to: FHIQLSCCREPGCCFQEAQLARP*RRGLRR Trigger: CCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTG...TGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGCTGTATGTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | TGGGCCCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGATGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: WAQASISVLSPQQGSHSDVPERQ*AILLWL Trigger: AAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGAC...ATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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3UTR CAA 72 bp | CCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTaGCTTCCTCCACAGCATGGGCCCAGGCCAGCATCT | + |
Preference number: 4 (lower is better) Translates to: PRHHLFLLCLDQ*LPPQHGPRPAS Trigger: AGATGCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | TCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCTCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAG | + |
Preference number: 4 (lower is better) Translates to: SPRQLGGATNGGMWPCGASMQSS*SAAAPE Trigger: CTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGA...GGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | CTCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCTCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAG | + |
Preference number: 4 (lower is better) Translates to: LTKTAWGSNKWRNVALWCSMQSS*SAAAPE Trigger: CTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGA...GCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | TGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTGCTCTGGCTCCCAGGCAGCAGGTCTaGGTCCAGCACCAGGAACAC | + |
Preference number: 4 (lower is better) Translates to: CSSVVSCPRATVGHTALAPRQQV*VQHQEH Trigger: GTGTTCCTGGTGCTGGACTCAGACCTGCTGCCTGGG...AGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | TGGGCCCAGGCCAGCATCTCTGTCCTGTCACCCCAGCAAGGAAGCCACTCTGATCTCTGGCTTCCATCCTaGGTGCGGCAATCGGTATAC | + |
Preference number: 4 (lower is better) Translates to: WAQASISVLSPQQGSHSDLWLPS*VRQSVY Trigger: GTATACCGATTGCCGCACTCAGGATGGAAGCCAGAG...ATCAGAGTGGCTTCCTTGCTGGGGTGACAGGACAGAGATGCTGGCCTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR CCA 90 bp | TCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCGTGAAGAGACACAGGTaGATGGCCAGCAGCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: SPRQLGGATNGGMWPCGAVKRHR*MASSSP Trigger: CGGGCTGCTGCTGGCCATCCACCTGTGTCTCTTCAC...GGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | GTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATC | + |
Preference number: 4 (lower is better) Translates to: VVGNQAAVSRRHDDTSEQAKARF*VYAGII Trigger: GATGATCCCTGCGTATACTCAGAACCGGGCCTTTGC...CTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | TTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTCCCAGGCAGCAGGTCTaGGTCCAGCACCAGGAACAC | + |
Preference number: 4 (lower is better) Translates to: LSQPLSVSEWSDPGTIFSPRQQV*VQHQEH Trigger: GTGTTCCTGGTGCTGGACTCAGACCTGCTGCCTGGG...AGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | AGGAATGGAGTCACTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTTGCTACCCCAGGCAGCAGGTCTaGGTCCAGCACCAGGAACAC | + |
Preference number: 4 (lower is better) Translates to: RNGVTHSVTEVASGRVCYPRQQV*VQHQEH Trigger: GTGTTCCTGGTGCTGGACTCAGACCTGCTGCCTGGG...GTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAGTGACTCCATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR CCA 90 bp | GAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCT | + |
Preference number: 4 (lower is better) Translates to: EDESLSQPLSVSEWSDPGNGDWY*GFSGRS Trigger: AGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT...GCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCT | + |
Preference number: 4 (lower is better) Translates to: VVGNQAAVSRRHDDTSEQNGDWY*GFSGRS Trigger: AGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT...CTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | GCTGAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: AELLSGTRLLFPGGTMTPVPERQ*AILLWL Trigger: AAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGAC...AGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208328.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGTGGGCCATACTGCTCTaGCTTCCCCCAGGACAAAGT | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPWAILL*LPPGQS Trigger: ACTTTGTCCTGGGGGAAGCCAGAGCAGTATGGCCCA...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR CAA 72 bp | TCATGCCAAGGCAGCTTGGGACCTCAGGGGTGGCATTaGGCCTCTCTGGTCTGGTTCCTCATTGGTGACAGG | + |
Preference number: 4 (lower is better) Translates to: SCQGSLGPQGWH*ASLVWFLIGDR Trigger: CCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCTGAGGTCCCAAGCTGCCTTGGCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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CDS-3UTR TCA 90 bp | GTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAAGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATC | + |
Preference number: 4 (lower is better) Translates to: VVVGNQAAVSRRHDDTSEAKARF*VYAGII Trigger: GATGATCCCTGCGTATACTCAGAACCGGGCCTTTGC...TTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | TCTTCTAGGATATCCCATCATGCTGTGAGCATCTCTTGCCAGCTCAGCAGCAGTAGTGGACCTGGCCACTaGCTCGGTCCCGGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: SSRISHHAVSISCQLSSSSGPGH*LGPGPE Trigger: TTCTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACT...ACTGCTGCTGAGCTGGCAAGAGATGCTCACAGCATGATGGGATATCCTAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPIMEEF*SRKKGR Trigger: CCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGAT...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | TTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGCCAGCATCTCCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAAT | + |
Preference number: 4 (lower is better) Translates to: LLCLDQLLPPQHGPRPASPLLVL*FILLTN Trigger: ATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGG...AGATGCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | TTCCACATACAGCTGAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCAAGAGACACAGGTGGATaGCCAGCAGCAGCCCGACAC | + |
Preference number: 4 (lower is better) Translates to: FHIQLSCCREPGCCFQEARDTGG*PAAARH Trigger: GTGTCGGGCTGCTGCTGGCCATCCACCTGTGTCTCT...TGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGCTGTATGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | AGGAATGGAGTCACTCACAGTGTCACGGAAGTGGCATCTGGACGGGTTTGCTACAGAGACACAGGTGGATaGCCAGCAGCAGCCCGACAC | + |
Preference number: 4 (lower is better) Translates to: RNGVTHSVTEVASGRVCYRDTGG*PAAARH Trigger: GTGTCGGGCTGCTGCTGGCCATCCACCTGTGTCTCT...GTAGCAAACCCGTCCAGATGCCACTTCCGTGACACTGTGAGTGACTCCATTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR CCA 90 bp | TGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGCAGCTGGCCCGGCCCTaGAGGCGAGGACTTCGTAGG | + |
Preference number: 4 (lower is better) Translates to: CTGLGSQMPLRLKAQISLQLARP*RRGLRR Trigger: CCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTG...CAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GCCAGAAACAGGTTGATCCAGATAACAGAGGACACCAGCCACCATAGCACAAAACAGCTGGCCCGGCCCTaGAGGCGAGGACTTCGTAGG | + |
Preference number: 4 (lower is better) Translates to: ARNRLIQITEDTSHHSTKQLARP*RRGLRR Trigger: CCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTG...TTTTGTGCTATGGTGGCTGGTGTCCTCTGTTATCTGGATCAACCTGTTTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | CTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: LSLSGLTQAPSFLALPRPVPERQ*AILLWL Trigger: AAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGAC...TGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | GGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: GNQAAVSRRHDDTSEQVDIMEEF*SRKKGR Trigger: CCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGAT...ATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | CTGGAGACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGTGTCGGGAACCAGGCTaGTGTTTCCAGGAGGCACGA | + |
Preference number: 4 (lower is better) Translates to: LETCQLLSCTGLGSQMPLCREPG*CFQEAR Trigger: TCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACA...CAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR GCA 90 bp | GTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAAACTGCCCAAGTTGGGTaGCCAGGTTCTCTGCAATCA | + |
Preference number: 4 (lower is better) Translates to: VVVGNQAAVSRRHDDTSETAQVG*PGSLQS Trigger: TGATTGCAGAGAACCTGGGCACCCAACTTGGGCAGT...TTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS-3UTR CCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPGSLQK*RLVLGL Trigger: AAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCC...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | AGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTGTAGGACAGGTAGCCTaGCAGGCCCAGCGCGAACAC | + |
Preference number: 4 (lower is better) Translates to: RLGFTNATEAEGTDKFVGVGQVA*QAQREH Trigger: GTGTTCGCGCTGGGCCTGCCAGGCTACCTGTCCTAC...ACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 72 bp | GTCCTGGAGACCTGCCAGTTACTGTCCTGTACAGGCTaGGGTTCACAAATGCCACTGAGGCTGAAGGCACAG | + |
Preference number: 4 (lower is better) Translates to: VLETCQLLSCTG*GSQMPLRLKAQ Trigger: CTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 72 bp | CCTAGCTGCTCAAAGCTTCCACATACAGCTGAGTTGTaGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACG | + |
Preference number: 4 (lower is better) Translates to: PSCSKLPHTAEL*SGTRLLFPGGT Trigger: CGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGCTGTATGTGGAAGCTTTGAGCAGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | TGTTGGGCCAGTAACCTAGCTGCTCAAAGCTTCCACATACAGCTGAGTTGTTGTCCCAGGCAGCAGGTCTaGGTCCAGCACCAGGAACAC | + |
Preference number: 4 (lower is better) Translates to: CWASNLAAQSFHIQLSCCPRQQV*VQHQEH Trigger: GTGTTCCTGGTGCTGGACTCAGACCTGCTGCCTGGG...ACAACAACTCAGCTGTATGTGGAAGCTTTGAGCAGCTAGGTTACTGGCCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | AAGCGAAACACAATCAGTGTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTCCCAGGCAGCAGGTCTaGGTCCAGCACCAGGAACAC | + |
Preference number: 4 (lower is better) Translates to: KRNTISVFISRVMSQSDSPRQQV*VQHQEH Trigger: GTGTTCCTGGTGCTGGACTCAGACCTGCTGCCTGGG...ACTGTCGCTCTGGGACATGACACGACTGATGAACACACTGATTGTGTTTCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | GCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGGCCAGCATCTCTGCAGGTAGTACAAGATaGAGATGTAGTCAAGAATCC | + |
Preference number: 4 (lower is better) Translates to: ALPRPVASSTAWAQASISAGSTR*RCSQES Trigger: GGATTCTTGACTACATCTTCATCTTGTACTACCTGC...AGAGATGCTGGCCTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | CTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: LSLSGLTQAPSFLALPRPIMEEF*SRKKGR Trigger: CCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGAT...TGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | TTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACCCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAAT | + |
Preference number: 4 (lower is better) Translates to: LLSGTRLLFPGGTMTPRNPLLVL*FILLTN Trigger: ATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGG...GTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | TTCTCACACACAGGCAGGCACACAAGCAAAGTCGTCAAAGTTGTTGGGCCAGTAGACAGTGGGCCATACTaGTCTGGCTTCCCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: FSHTGRHTSKVVKVVGPVDSGPY*SGFPQD Trigger: GTCCTGGGGGAAGCCAGAGCAGTATGGCCCACTGTC...TACTGGCCCAACAACTTTGACGACTTTGCTTGTGTGCCTGCCTGTGTGTGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR CCA 90 bp | CAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACAGAGGACACCAGCCACCAGTGAAGAGACACAGGTaGATGGCCAGCAGCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: QKKSQKQVDPDNRGHQPPVKRHR*MASSSP Trigger: CGGGCTGCTGCTGGCCATCCACCTGTGTCTCTTCAC...TGGTGGCTGGTGTCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | AGGGTGAGAGATTTTGACTCACTTTCCAGTCCTGGTGCGTTTAGCCTGAAGTGGGTGAAGAGACACAGGTaGATGGCCAGCAGCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: RVRDFDSLSSPGAFSLKWVKRHR*MASSSP Trigger: CGGGCTGCTGCTGGCCATCCACCTGTGTCTCTTCAC...CCACTTCAGGCTAAACGCACCAGGACTGGAAAGTGAGTCAAAATCTCTCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR CCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGTCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPSHQGC*KSSAAL Trigger: TAGTGCTGCTGACGACTTCCAACAACCCTGATGTGA...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | CTCTCATCTCCTGCCTACATGGGGCAGCTTGCCGCTGTCTGTAACTCCAGCTCCCGTTTTCTGAAGCACTaGCAGGAAGGTCTCAGGATT | + |
Preference number: 4 (lower is better) Translates to: LSSPAYMGQLAAVCNSSSRFLKH*QEGLRI Trigger: AATCCTGAGACCTTCCTGCCAGTGCTTCAGAAAACG...GGAGCTGGAGTTACAGACAGCGGCAAGCTGCCCCATGTAGGCAGGAGATGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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3UTR CAA 72 bp | CAGAGGACACCAGCCACCATAGCACAAAATACACCATaGACCACGGGCCTGCGTAGCGCTTATAGGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: QRTPATIAQNTP*TTGLRSAYRLP Trigger: TGGAAGCCTATAAGCGCTACGCAGGCCCGTGGTCAATGGTGTATTTTGTGCTATGGTGGCTGGTGTCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | ATGGTGTTGGCTACCTCAGCCATTGGCTTTATGTTGGGGATGATGCGCAGGAAGGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATC | + |
Preference number: 4 (lower is better) Translates to: MVLATSAIGFMLGMMRRKAKARF*VYAGII Trigger: GATGATCCCTGCGTATACTCAGAACCGGGCCTTTGC...CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGCTGAGGTAGCCAACACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | GAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: ESLSQPLSVSEWSDPGTIGTDYR*WLSAGS Trigger: TGAACCTGCTGACAGCCATCATCTATAATCAGTTCC...GATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | CCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCCCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAAT | + |
Preference number: 4 (lower is better) Translates to: PLSVSEWSDPGTIFSCSAPLLVL*FILLTN Trigger: ATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGG...GGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGATGAACTGGGCAGTCTaGAGAAATGGAGACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPMNWAV*RNGDWY Trigger: ATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | CCACAGAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCGGCCATCAAACACATTaGTATGGTAGGACAGGTAGC | + |
Preference number: 4 (lower is better) Translates to: PQRMSPCPSLCLSLSGLTGHQTH*YGRTGS Trigger: GCTACCTGTCCTACCATAGCAATGTGTTTGATGGCC...GGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | TGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCGCTTCCAGGATCACCTaGCAATTGTTCACCACCATC | + |
Preference number: 4 (lower is better) Translates to: WSDPGTIFSCSASTSCFLASRIT*QLFTTI Trigger: GATGGTGGTGAACAATTGGCAGGTGATCCTGGAAGC...GAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR CCA 90 bp | ATCACCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGTGAAGAGACACAGGTaGATGGCCAGCAGCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: ITCQLFTTITFHSVIKAAVKRHR*MASSSP Trigger: CGGGCTGCTGCTGGCCATCCACCTGTGTCTCTTCAC...TGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGCAAGGAAGCCACTCTGATGTCACCTGCACAGATGCAAGTGTGGGTGTCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: HPSKEATLMSPAQMQVWVSHQGC*KSSAAL Trigger: TAGTGCTGCTGACGACTTCCAACAACCCTGATGTGA...CACCCACACTTGCATCTGTGCAGGTGACATCAGAGTGGCTTCCTTGCTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GCTGAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTTCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: AELLSGTRLLFPGGTMTPSHQGC*KSSAAL Trigger: TAGTGCTGCTGACGACTTCCAACAACCCTGATGTGA...AGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | CTCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCGTTTTCTGAAGCACTaGCAGGAAGGTCTCAGGATT | + |
Preference number: 4 (lower is better) Translates to: LTKTAWGSNKWRNVALWCRFLKH*QEGLRI Trigger: AATCCTGAGACCTTCCTGCCAGTGCTTCAGAAAACG...GCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | CCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: PCPSLCLSLSGLTQAPSFGSLQK*RLVLGL Trigger: AAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCC...AAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GCTACTGCTGAGCAACCACAGAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: ATAEQPQRMSPCPSLCLSGSLQK*RLVLGL Trigger: AAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCC...AGACAGACAGAGGCTGGGACAAGGACTCATCCTCTGTGGTTGCTCAGCAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 72 bp | TCACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTaGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: SLSLLSKSHQDS*GEQQMEECGPV Trigger: CACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | TCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCACGTTCCACAGTGTaGTCAAAGCAGCAGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: SLSQPLSVSEWSDPGTIFSRSTV*SKQQQS Trigger: ACTTTGCTGCTGCTTTGATCACACTGTGGAACGTGA...AAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR GCA 90 bp | GGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATATGAACTGGGCAGTCTaGAGAAATGGAGACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: GNQAAVSRRHDDTSEQVDMNWAV*RNGDWY Trigger: ATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT...ATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | TCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTGGCCATCAAACACATTaGTATGGTAGGACAGGTAGC | + |
Preference number: 4 (lower is better) Translates to: SLSQPLSVSEWSDPGTIFGHQTH*YGRTGS Trigger: GCTACCTGTCCTACCATAGCAATGTGTTTGATGGCC...AAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | TCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTGACAGTGGGCCATACTaGTCTGGCTTCCATCCTGAG | + |
Preference number: 4 (lower is better) Translates to: SCTGLGSQMPLRLKAQISDSGPY*SGFHPE Trigger: CTCAGGATGGAAGCCAGAGCAGTATGGCCCACTGTC...ACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR CCA 90 bp | CCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: PLSVSEWSDPGTIFSCSASHQGC*KSSAAL Trigger: TAGTGCTGCTGACGACTTCCAACAACCCTGATGTGA...GGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | CCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCACCATCTTTTCGTTTTCTGAAGCACTaGCAGGAAGGTCTCAGGATT | + |
Preference number: 4 (lower is better) Translates to: PCPSLCLSLSGLTQAPSFRFLKH*QEGLRI Trigger: AATCCTGAGACCTTCCTGCCAGTGCTTCAGAAAACG...AAAAGATGGTGCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | AGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCT | + |
Preference number: 4 (lower is better) Translates to: RLGFTNATEAEGTDKFVGNGDWY*GFSGRS Trigger: AGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT...ACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | TCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCT | + |
Preference number: 4 (lower is better) Translates to: SCTGLGSQMPLRLKAQISNGDWY*GFSGRS Trigger: AGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT...ACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | GAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACAGAGGATCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAG | + |
Preference number: 4 (lower is better) Translates to: EKVLQKKSQKQVDPDNRGSMQSS*SAAAPE Trigger: CTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGA...TCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | CTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATC | + |
Preference number: 4 (lower is better) Translates to: LGFTNATEAEGTDKFVGIAKARF*VYAGII Trigger: GATGATCCCTGCGTATACTCAGAACCGGGCCTTTGC...GATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | CTGCCAATTGTTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGCAAAGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATC | + |
Preference number: 4 (lower is better) Translates to: LPIVHHHHVPQCDQSSSKAKARF*VYAGII Trigger: GATGATCCCTGCGTATACTCAGAACCGGGCCTTTGC...TTTGCTGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | GCTACTGCTGAGCAACCACAGAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: ATAEQPQRMSPCPSLCLSGTDYR*WLSAGS Trigger: TGAACCTGCTGACAGCCATCATCTATAATCAGTTCC...AGACAGACAGAGGCTGGGACAAGGACTCATCCTCTGTGGTTGCTCAGCAGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | GGAAGTGGCATCTGGACGGGTTTGCTACAGACTGACTCTGGCTCCTCTCATCTCGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: GSGIWTGLLQTDSGSSHLGTDYR*WLSAGS Trigger: TGAACCTGCTGACAGCCATCATCTATAATCAGTTCC...GAGATGAGAGGAGCCAGAGTCAGTCTGTAGCAAACCCGTCCAGATGCCACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR GCA 90 bp | AAAGAGGTGACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: KEVTFSTHDTNPNVLETCIMEEF*SRKKGR Trigger: CCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGAT...GCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGTCACCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | AACACAATCAGTGTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTGGGCCACCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAAT | + |
Preference number: 4 (lower is better) Translates to: NTISVFISRVMSQSDSGPPLLVL*FILLTN Trigger: ATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGG...TGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACACACTGATTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | AGTGGTCTGACCCAGGCACCATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCATGAACTGGGCAGTCTaGAGAAATGGAGACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: SGLTQAPSFLALPRPVASMNWAV*RNGDWY Trigger: ATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT...GGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGGTGCCTGGGTCAGACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | AGTCGTCAAAGTTGTTGGGCCAGTAACCTAGCTGCTCAAAGCTTCCACATACAGAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCT | + |
Preference number: 4 (lower is better) Translates to: SRQSCWASNLAAQSFHIQNGDWY*GFSGRS Trigger: AGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT...CTGTATGTGGAAGCTTTGAGCAGCTAGGTTACTGGCCCAACAACTTTGACGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | AGGACCCTTGGAAGTCACTCTCTCTCCTTAGCAAGTCTCACCAAGACAGCTTGGGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: RTLGSHSLSLASLTKTAWGSLQK*RLVLGL Trigger: AAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCC...CCAAGCTGTCTTGGTGAGACTTGCTAAGGAGAGAGAGTGACTTCCAAGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | CTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCAAGGAGAGCTGAGGCCTTCTCAGTTCCTCCTCCTTaGGCTCTTCTAGGATATCCC | + |
Preference number: 4 (lower is better) Translates to: LRLKAQISLWVSRRAEAFSVPPP*ALLGYP Trigger: GGGATATCCTAGAAGAGCCCAAGGAGGAGGAACTGA...GAAGGCCTCAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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3UTR CAA 72 bp | TATCAAGGAGAGCTGAGGCCTTCTTGCTTCCTGGCTTaGAGGAAGGACCCTTGGAAGTCACTCTCTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: YQGELRPSCFLA*RKDPWKSLSLL Trigger: AAGGAGAGAGAGTGACTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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3UTR CAA 72 bp | AATGCCCTCAAGTTAGGGATTAGGCCCAGGATGGTGTaGGCTACCTCAGCCATTGGCTTTATGTTGGGGATG | + |
Preference number: 4 (lower is better) Translates to: NALKLGIRPRMV*ATSAIGFMLGM Trigger: CATCCCCAACATAAAGCCAATGGCTGAGGTAGCCAACACCATCCTGGGCCTAATCCCTAACTTGAGGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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3UTR CAA 72 bp | GGGTGTTTGTGTAGCTTCTCCATCAGTTCCTCCTCCTaGGGCTCTTCTAGGATATCCCTGAACATGAGCTCC | + |
Preference number: 4 (lower is better) Translates to: GCLCSFSISSSS*GSSRISLNMSS Trigger: GGAGCTCATGTTCAGGGATATCCTAGAAGAGCCCAAGGAGGAGGAACTGATGGAGAAGCTACACAAACACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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3UTR CAA 72 bp | AGGGGTGGCATTTGGCCTCTCTGGTCTGGTTCCTCATaGGTGACAGGGGTTCCCATTAGCTTTGTCTATCTA | + |
Preference number: 4 (lower is better) Translates to: RGGIWPLWSGSS*VTGVPISFVYL Trigger: TAGATAGACAAAGCTAATGGGAACCCCTGTCACCAATGAGGAACCAGACCAGAGAGGCCAAATGCCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209156.2 |
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3UTR CAA 72 bp | GGGTGTTTGTGTAGCTTCTCCATCAGTTCCTCCTCCTaGGGCTCTTCTAGGATATCCCATCATGCTGTGAGC | + |
Preference number: 4 (lower is better) Translates to: GCLCSFSISSSS*GSSRISHHAVS Trigger: GCTCACAGCATGATGGGATATCCTAGAAGAGCCCAAGGAGGAGGAACTGATGGAGAAGCTACACAAACACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | CTGGAGACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: LETCQLLSCTGLGSQMPLGTDYR*WLSAGS Trigger: TGAACCTGCTGACAGCCATCATCTATAATCAGTTCC...CAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | GTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGAATTCCCAAGGAACTTaGCAGAACATGTTGATATCA | + |
Preference number: 4 (lower is better) Translates to: VVGNQAAVSRRHDDTSEQNSQGT*QNMLIS Trigger: TGATATCAACATGTTCTGTCAAGTTCCTTGGGAATT...CTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | TTCTCACACACAGGCAGGCACACAAGCAAAGTCGTCAAAGTTGTTGGGCCAGTACCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAAT | + |
Preference number: 4 (lower is better) Translates to: FSHTGRHTSKVVKVVGPVPLLVL*FILLTN Trigger: ATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGG...TACTGGCCCAACAACTTTGACGACTTTGCTTGTGTGCCTGCCTGTGTGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS-3UTR GCA 90 bp | GACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTATGAACTGGGCAGTCTaGAGAAATGGAGACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: DLPVTVLYRLGFTNATEAMNWAV*RNGDWY Trigger: ATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT...AGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | TTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCAGACAGTGGGCCATACTaGTCTGGCTTCCAGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: LGSQMPLRLKAQISLWVSDSGPY*SGFQQD Trigger: ATCCTGCTGGAAGCCAGAGCAGTATGGCCCACTGTC...TGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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3UTR CAA 72 bp | ATAAGTTTGTGGGTATCAAGGAGAGCTGAGGCCTTCTaGCTTCCTGGCTTTGAGGAAGGACCCTTGGAAGTC | + |
Preference number: 4 (lower is better) Translates to: ISLWVSRRAEAF*LPGFEEGPLEV Trigger: GACTTCCAAGGGTCCTTCCTCAAAGCCAGGAAGCAAGAAGGCCTCAGCTCTCCTTGATACCCACAAACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | ACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGGGCCATCAAACACATTaGTATGGTAGGACAGGTAGC | + |
Preference number: 4 (lower is better) Translates to: TFSTHDTNPNVLETCQLLGHQTH*YGRTGS Trigger: GCTACCTGTCCTACCATAGCAATGTGTTTGATGGCC...CAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR GCA 90 bp | ATGACCTTGAGGGTCCCATCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAAACATACCATCCTGAGTaGGGCAATCGGTATACAGCC | + |
Preference number: 4 (lower is better) Translates to: MTLRVPSVEKVLQKKSQKTYHPE*GNRYTA Trigger: GGCTGTATACCGATTGCCGCACTCAGGATGGTATGT...TTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGATGGGACCCTCAAGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS-3UTR CCA 90 bp | AGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTTCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTA | + |
Preference number: 4 (lower is better) Translates to: RLGFTNATEAEGTDKFVGSHQGC*KSSAAL Trigger: TAGTGCTGCTGACGACTTCCAACAACCCTGATGTGA...ACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | AGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTCGTTTTCTGAAGCACTaGCAGGAAGGTCTCAGGATT | + |
Preference number: 4 (lower is better) Translates to: RLGFTNATEAEGTDKFVGRFLKH*QEGLRI Trigger: AATCCTGAGACCTTCCTGCCAGTGCTTCAGAAAACG...ACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | TGTTGGGCCAGTAACCTAGCTGCTCAAAGCTTCCACATACAGCTGAGTTGTTGTGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: CWASNLAAQSFHIQLSCCGSLQK*RLVLGL Trigger: AAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCC...ACAACAACTCAGCTGTATGTGGAAGCTTTGAGCAGCTAGGTTACTGGCCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | TTCCACATACAGCTGAGTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACTTGACAGAACATGTTaGTATCAGAGAAGAGATCGT | + |
Preference number: 4 (lower is better) Translates to: FHIQLSCCREPGCCFQEALDRTC*YQRRDR Trigger: ACGATCTCTTCTCTGATATCAACATGTTCTGTCAAG...TGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAACTCAGCTGTATGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS-3UTR GCA 90 bp | AGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACAGAGGACATCATGGAGGAATTCTaGAGCAGGAAGAAGGGGCGG | + |
Preference number: 4 (lower is better) Translates to: RKFSRRRARNRLIQITEDIMEEF*SRKKGR Trigger: CCGCCCCTTCTTCCTGCTGCAGAATTCCTCCATGAT...GTCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | ATCACCTGCCAATTGTTCACCACCATCACGTTCCACAGTGTGATCAAAGCAGCAGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: ITCQLFTTITFHSVIKAAGTDYR*WLSAGS Trigger: TGAACCTGCTGACAGCCATCATCTATAATCAGTTCC...TGCTGCTTTGATCACACTGTGGAACGTGATGGTGGTGAACAATTGGCAGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | ACATTCTCTACACATGACACCAACCCCAATGTCCTGGAGACCTGCCAGTTACTGGCAGGTAGTACAAGATaGAGATGTAGTCAAGAATCC | + |
Preference number: 4 (lower is better) Translates to: TFSTHDTNPNVLETCQLLAGSTR*RCSQES Trigger: GGATTCTTGACTACATCTTCATCTTGTACTACCTGC...CAGTAACTGGCAGGTCTCCAGGACATTGGGGTTGGTGTCATGTGTAGAGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR TCA 90 bp | TTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGTGGGTATCAAATCACATACCATCCTaGGTGCGGCAATCGGTATAC | + |
Preference number: 4 (lower is better) Translates to: LGSQMPLRLKAQISLWVSNHIPS*VRQSVY Trigger: GTATACCGATTGCCGCACTCAGGATGGTATGTGATT...TGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS-3UTR GCA 90 bp | CTGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTATGAACTGGGCAGTCTaGAGAAATGGAGACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: LYRLGFTNATEAEGTDKFMNWAV*RNGDWY Trigger: ATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT...AAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CCA 90 bp | GTACAAGATGAAGATGTAGTCAAGAATCTGAGGACTGACAGAATGCTCAAAATTGTGAAGAGACACAGGTaGATGGCCAGCAGCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: VQDEDVVKNLRTDRMLKIVKRHR*MASSSP Trigger: CGGGCTGCTGCTGGCCATCCACCTGTGTCTCTTCAC...AATTTTGAGCATTCTGTCAGTCCTCAGATTCTTGACTACATCTTCATCTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS-3UTR CCA 90 bp | GAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACAGAGGACGTTTTCTGAAGCACTaGCAGGAAGGTCTCAGGATT | + |
Preference number: 4 (lower is better) Translates to: EKVLQKKSQKQVDPDNRGRFLKH*QEGLRI Trigger: AATCCTGAGACCTTCCTGCCAGTGCTTCAGAAAACG...TCCTCTGTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR TCA 90 bp | TCTGTGGAGAAAGTTCTCCAGAAGAAGAGCCAGAAACAGGTTGATCCAGATAACGCAGGTAGTACAAGATaGAGATGTAGTCAAGAATCC | + |
Preference number: 4 (lower is better) Translates to: SVEKVLQKKSQKQVDPDNAGSTR*RCSQES Trigger: GGATTCTTGACTACATCTTCATCTTGTACTACCTGC...GTTATCTGGATCAACCTGTTTCTGGCTCTTCTTCTGGAGAACTTTCTCCACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS GCA 90 bp | TTCAATGAAGACCACAGCCTGGTCTATGCAGAGCTCCTGATCGGCTaGAGCACCGGAGTGGACCTGGCCACTGCCTCGGTCCCGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: FNEDHSLVYAELLIG*STGVDLATASVPAQ Trigger: CTGGGCCGGGACCGAGGCAGTGGCCAGGTCCACTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGACCAGGCTGTGGTCTTCATTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS CCA 90 bp | GCACTGGCAGGAAGGTCTCAGGATTCACCCCAACTAACTCAGGGGTaGTTCCAGCTGGCCCGGCCCTGGAGGCGAGGACTTCGTAGGCTG | + |
Preference number: 5 (lower is better) Translates to: ALAGRSQDSPQLTQG*FQLARPWRRGLRRL Trigger: CAGCCTACGAAGTCCTCGCCTCCAGGGCCGGGCCAGCTGGAACCACCCCTGAGTTAGTTGGGGTGAATCCTGAGACCTTCCTGCCAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS TCA 90 bp | ATGGCGTCTTCAATGAAGACCACAGCCTGGTCTATGCAGAGCTCCTaGTCGGCTGCAGCACCGGAGTGGACCTGGCCACTGCCTCGGTCC | + |
Preference number: 5 (lower is better) Translates to: MASSMKTTAWSMQSS*SAAAPEWTWPLPRS Trigger: GGACCGAGGCAGTGGCCAGGTCCACTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGACCAGGCTGTGGTCTTCATTGAAGACGCCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS GCA 90 bp | CAGGCCACAGGGCGGCTGCCAGGGCTGGGAACGGTAGCGCACATCTaGAGTCTTTGTGAAGGAAGATGGGACCTCCACAAAAGCCAAGAT | + |
Preference number: 5 (lower is better) Translates to: QATGRLPGLGTVAHI*SLCEGRWDLHKSQD Trigger: ATCTTGGCTTTTGTGGAGGTCCCATCTTCCTTCACAAAGACTGCAGATGTGCGCTACCGTTCCCAGCCCTGGCAGCCGCCCTGTGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS CCA 90 bp | CATCAGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTGCTCTaGCTTCCCCCAGGACAAAGTCATCACGTTCCCCAGGCAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: HQSCHVPERQWAILL*LPPGQSHHVPQAAG Trigger: ACCTGCTGCCTGGGGAACGTGATGACTTTGTCCTGGGGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS GCA 90 bp | TCCCAGAGCGACAGTGGGCCATACTGCTCTGGCTTCCATCCTGAGTaGGGCAATCGGTATACAGCCAGGGTGCAAATCTCCGAAACCAGC | + |
Preference number: 5 (lower is better) Translates to: SQSDSGPYCSGFHPE*GNRYTARVQISETS Trigger: GCTGGTTTCGGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS TCA 90 bp | CATGTCCCAGAGCGACAGTGGGCCATACTGCTCTGGCTTCCATCCTaGGTGCGGCAATCGGTATACAGCCAGGGTGCAAATCTCCGAAAC | + |
Preference number: 5 (lower is better) Translates to: HVPERQWAILLWLPS*VRQSVYSQGANLRN Trigger: GTTTCGGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS-3UTR CAA 90 bp | GTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGCCATTGGCTTTATGTaGGGGATGATGCGCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: VVGNQAAVSRRHDDTSEQAIGFM*GMMRRK Trigger: CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGC...CTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208328.2 ENSMUST00000208841.2 |
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CDS-3UTR CAA 90 bp | ACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAACAGGTTGATCCCGATCATCACATCAGGGTaGTTGGAAGTCGTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: TRLLFPGGTMTPRNRLIPIITSG*LEVVSS Trigger: GCTGCTGACGACTTCCAACAACCCTGATGTGATGAT...CGGGATCAACCTGTTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | TCACCAAGACAGCTTGGGGGAGCAACAAATGGAGGAATGTGGCCCTGTGGTGCCGCCATTGGCTTTATGTaGGGGATGATGCGCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: SPRQLGGATNGGMWPCGAAIGFM*GMMRRK Trigger: CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGC...GGCACCACAGGGCCACATTCCTCCATTTGTTGCTCCCCCAAGCTGTCTTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058022.6 ENSMUST00000208841.2 |
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CDS-3UTR CAA 90 bp | GAGGATGAGTCCTTGTCCCAGCCTCTGTCTGTCTCTGAGTGGTCTGACCCAGGCATCAGTTCCTCCTCCTaGGGCTCTTCTAGGATATCC | + |
Preference number: 5 (lower is better) Translates to: EDESLSQPLSVSEWSDPGISSSS*GSSRIS Trigger: GGATATCCTAGAAGAGCCCAAGGAGGAGGAACTGAT...GCCTGGGTCAGACCACTCAGAGACAGACAGAGGCTGGGACAAGGACTCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS TCA 90 bp | CTGCCCAAGTTGGGTGCCCAGGTTCTCTGCAATCACATACCATCCTaGGTGCGGCAATCGGTATACAGCCAGGGTGCAAATCTCCGAAAC | + |
Preference number: 5 (lower is better) Translates to: LPKLGAQVLCNHIPS*VRQSVYSQGANLRN Trigger: GTTTCGGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGTATGTGATTGCAGAGAACCTGGGCACCCAACTTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS GCA 90 bp | CCAAGTTGGGTGCCCAGGTTCTCTGCAATCACATACCATCCTGAGTaGGGCAATCGGTATACAGCCAGGGTGCAAATCTCCGAAACCAGC | + |
Preference number: 5 (lower is better) Translates to: PSWVPRFSAITYHPE*GNRYTARVQISETS Trigger: GCTGGTTTCGGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGTATGTGATTGCAGAGAACCTGGGCACCCAACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS-3UTR CAA 90 bp | CCATCTTTTCTTGCTCTGCCTCGACCAGTTGCTTCCTCCACAGCATGGGCCCAGATCATCACATCAGGGTaGTTGGAAGTCGTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: PSFLALPRPVASSTAWAQIITSG*LEVVSS Trigger: GCTGCTGACGACTTCCAACAACCCTGATGTGATGAT...CTGGGCCCATGCTGTGGAGGAAGCAACTGGTCGAGGCAGAGCAAGAAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS-3UTR CAA 90 bp | GTTGTTGTCGGGAACCAGGCTGCTGTTTCCAGGAGGCACGATGACACCTCGGAAATCATCACATCAGGGTaGTTGGAAGTCGTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: VVVGNQAAVSRRHDDTSEIITSG*LEVVSS Trigger: GCTGCTGACGACTTCCAACAACCCTGATGTGATGAT...TTCCGAGGTGTCATCGTGCCTCCTGGAAACAGCAGCCTGGTTCCCGACAACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | ACACCAGCCACCATAGCACAAAATACACCATTGACCACGGGCCTGCGTAGCGCTGCCATTGGCTTTATGTaGGGGATGATGCGCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: TPATIAQNTPLTTGLRSAAIGFM*GMMRRK Trigger: CTTCCTGCGCATCATCCCCAACATAAAGCCAATGGC...AGCGCTACGCAGGCCCGTGGTCAATGGTGTATTTTGTGCTATGGTGGCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208841.2 |
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CDS CCA 90 bp | CACAATCAGTGTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTTCCCCCAGGACAAAGTCATCACGTT | + |
Preference number: 5 (lower is better) Translates to: HNQCVHQSCHVPERQ*AILLWLPPGQSHHV Trigger: AACGTGATGACTTTGTCCTGGGGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACACACTGATTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS TCA 90 bp | CACACGTTGGCAGACGTTCGAGTAATACCAGCGGTAAAGCCACAATaGACCAGCATCCATGCGGTGGTAGATGGAGCGGTACTTTATGGC | + |
Preference number: 5 (lower is better) Translates to: HTLADVRVIPAVKPQ*TSIHAVVDGAVLYG Trigger: GCCATAAAGTACCGCTCCATCTACCACCGCATGGATGCTGGTTCATTGTGGCTTTACCGCTGGTATTACTCGAACGTCTGCCAACGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS CCA 90 bp | TGGCTAAAGATGAACTGGGCAGTCTGCAGAAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCTTTGGCCAAACCTTTGTCAACCTCA | + |
Preference number: 5 (lower is better) Translates to: WLKMNWAVCRNGDWY*GFSGRSLAKPLSTS Trigger: TGAGGTTGACAAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCATCTTTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | CTGGAGACCTGCCAGTTACTGTCCTGTACAGGCTTGGGTTCACAAATGCCACTGAGGATCACCTGCCAATaGTTCACCACCATCACGTTC | + |
Preference number: 5 (lower is better) Translates to: LETCQLLSCTGLGSQMPLRITCQ*FTTITF Trigger: GAACGTGATGGTGGTGAACAATTGGCAGGTGATCCT...CAGTGGCATTTGTGAACCCAAGCCTGTACAGGACAGTAACTGGCAGGTCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS CCA 90 bp | TCTGCAGAAATGGAGACTGGTATTGGGGCTTCAGCGGGCGCTCTTTaGCCAAACCTTTGTCAACCTCATCGAAGAGTTTCTGGAACTCAT | + |
Preference number: 5 (lower is better) Translates to: SAEMETGIGASAGAL*PNLCQPHRRVSGTH Trigger: ATGAGTTCCAGAAACTCTTCGATGAGGTTGACAAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | GATGCGCAGGAAGCGAAACACAATCAGTGTGTTCATCAGTCGTGTCATGTCCCAATCATCACATCAGGGTaGTTGGAAGTCGTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: DAQEAKHNQCVHQSCHVPIITSG*LEVVSS Trigger: GCTGCTGACGACTTCCAACAACCCTGATGTGATGAT...TGGGACATGACACGACTGATGAACACACTGATTGTGTTTCGCTTCCTGCGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208148.2 ENSMUST00000209047.2 |
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CDS TCA 90 bp | CCTATCAAGGTGAAGACTATGAAGAAGAGAGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATCACATCAGGGTTGTTGGAAGTCGTC | + |
Preference number: 5 (lower is better) Translates to: PIKVKTMKKRAKARF*VYAGIITSGLLEVV Trigger: GACGACTTCCAACAACCCTGATGTGATGATCCCTGCGTATACTCAGAACCGGGCCTTTGCTCTCTTCTTCATAGTCTTCACCTTGATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | TGTACAGGCTTGGGTTCACAAATGCCACTGAGGCTGAAGGCACAGATAAGTTTGATCATCACATCAGGGTaGTTGGAAGTCGTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: CTGLGSQMPLRLKAQISLIITSG*LEVVSS Trigger: GCTGCTGACGACTTCCAACAACCCTGATGTGATGAT...CAAACTTATCTGTGCCTTCAGCCTCAGTGGCATTTGTGAACCCAAGCCTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208841.2 |
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CDS CCA 90 bp | TTTGTCAACCTCATCGAAGAGTTTCTGGAACTCATCAGCCAGCATTaGGCGGCCTTCATAGGACTGCACCTTCTGCATAATGGCTTGTTT | + |
Preference number: 5 (lower is better) Translates to: FVNLIEEFLELISQH*AAFIGLHLLHNGLF Trigger: AAACAAGCCATTATGCAGAAGGTGCAGTCCTATGAAGGCCGCCCAATGCTGGCTGATGAGTTCCAGAAACTCTTCGATGAGGTTGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS-3UTR CAA 90 bp | TGTTGGGCCAGTAACCTAGCTGCTCAAAGCTTCCACATACAGCTGAGTTGTTGTCAATTCCCAAGGAACTaGACAGAACATGTTGATATC | + |
Preference number: 5 (lower is better) Translates to: CWASNLAAQSFHIQLSCCQFPRN*TEHVDI Trigger: GATATCAACATGTTCTGTCAAGTTCCTTGGGAATTG...ACAACAACTCAGCTGTATGTGGAAGCTTTGAGCAGCTAGGTTACTGGCCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209047.2 |
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CDS TCA 90 bp | AGGTCTGTAGAGATTTCATTAGGTAGCCACGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCATCAGAAACAAGCTTCCTATCAAGG | + |
Preference number: 5 (lower is better) Translates to: RSVEISLGSHGTDYR*WLSAGSSETSFLSR Trigger: CCTTGATAGGAAGCTTGTTTCTGATGAACCTGCTGACAGCCATCATCTATAATCAGTTCCGTGGCTACCTAATGAAATCTCTACAGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS GCA 72 bp | GACCACAGCCTGGTCTATGCAGAGCTCCTGATCGGCTaGAGCACCGGAGTGGACCTGGCCACTGCCTCGGTC | + |
Preference number: 6 (lower is better) Translates to: DHSLVYAELLIG*STGVDLATASV Trigger: GACCGAGGCAGTGGCCAGGTCCACTCCGGTGCTGCAGCCGATCAGGAGCTCTGCATAGACCAGGCTGTGGTC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS CCA 72 bp | GGAAGGTCTCAGGATTCACCCCAACTAACTCAGGGGTaGTTCCAGCTGGCCCGGCCCTGGAGGCGAGGACTT | + |
Preference number: 6 (lower is better) Translates to: GRSQDSPQLTQG*FQLARPWRRGL Trigger: AAGTCCTCGCCTCCAGGGCCGGGCCAGCTGGAACCACCCCTGAGTTAGTTGGGGTGAATCCTGAGACCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS GCA 72 bp | GGGCGGCTGCCAGGGCTGGGAACGGTAGCGCACATCTaGAGTCTTTGTGAAGGAAGATGGGACCTCCACAAA | + |
Preference number: 6 (lower is better) Translates to: GRLPGLGTVAHI*SLCEGRWDLHK Trigger: TTTGTGGAGGTCCCATCTTCCTTCACAAAGACTGCAGATGTGCGCTACCGTTCCCAGCCCTGGCAGCCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS GCA 72 bp | GACAGTGGGCCATACTGCTCTGGCTTCCATCCTGAGTaGGGCAATCGGTATACAGCCAGGGTGCAAATCTCC | + |
Preference number: 6 (lower is better) Translates to: DSGPYCSGFHPE*GNRYTARVQIS Trigger: GGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGAAGCCAGAGCAGTATGGCCCACTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS GCA 72 bp | AGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTaGTCTGGCTTCCATCCTGAGTGCGGCAATCGGTAT | + |
Preference number: 6 (lower is better) Translates to: SRVMSQSDSGPY*SGFHPECGNRY Trigger: ATACCGATTGCCGCACTCAGGATGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058022.6 |
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CDS GCA 72 bp | AGTCGTGTCATGTCCCAGAGCGACAGTGGGCCATACTaGTCTGGCTTCCCCCAGGACAAAGTCATCACGTTC | + |
Preference number: 6 (lower is better) Translates to: SRVMSQSDSGPY*SGFPQDKVITF Trigger: GAACGTGATGACTTTGTCCTGGGGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS CCA 72 bp | TGTGTTCATCAGTCGTGTCATGTCCCAGAGCGACAGTaGGCCATACTGCTCTGGCTTCCCCCAGGACAAAGT | + |
Preference number: 6 (lower is better) Translates to: CVHQSCHVPERQ*AILLWLPPGQS Trigger: ACTTTGTCCTGGGGGAAGCCAGAGCAGTATGGCCCACTGTCGCTCTGGGACATGACACGACTGATGAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208328.2 |
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CDS GCA 72 bp | AAGGTTCCGGAAGTAGGCCAGCCTCTCCTGGTCCTGTaGTTCATCCTTCTCACCAATGGTGAACAGCAGCAT | + |
Preference number: 6 (lower is better) Translates to: KVPEVGQPLLVL*FILLTNGEQQH Trigger: ATGCTGCTGTTCACCATTGGTGAGAAGGATGAAGCACAGGACCAGGAGAGGCTGGCCTACTTCCGGAACCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS GCA 72 bp | GTGCCCAGGTTCTCTGCAATCACATACCATCCTGAGTaGGGCAATCGGTATACAGCCAGGGTGCAAATCTCC | + |
Preference number: 6 (lower is better) Translates to: VPRFSAITYHPE*GNRYTARVQIS Trigger: GGAGATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGTATGTGATTGCAGAGAACCTGGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS CCA 72 bp | ATGAACTGGGCAGTCTGCAGAAATGGAGACTGGTATTaGGGCTTCAGCGGGCGCTCTTTGGCCAAACCTTTG | + |
Preference number: 6 (lower is better) Translates to: MNWAVCRNGDWY*GFSGRSLAKPL Trigger: CAAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CCA 72 bp | GTGGTGGCTAAAGATGAACTGGGCAGTCTGCAGAAATaGAGACTGGTATTGGGGCTTCAGCGGGCGCTCTTT | + |
Preference number: 6 (lower is better) Translates to: VVAKDELGSLQK*RLVLGLQRALF Trigger: AAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCATCTTTAGCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CAA 72 bp | GATGAACTGGGCAGTCTGCAGAAATGGAGACTGGTATaGGGGCTTCAGCGGGCGCTCTTTGGCCAAACCTTT | + |
Preference number: 6 (lower is better) Translates to: DELGSLQKWRLV*GLQRALFGQTF Trigger: AAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CAA 90 bp | GTGGCTAAAGATGAACTGGGCAGTCTGCAGAAATGGAGACTGGTATaGGGGCTTCAGCGGGCGCTCTTTGGCCAAACCTTTGTCAACCTC | + |
Preference number: 6 (lower is better) Translates to: VAKDELGSLQKWRLV*GLQRALFGQTFVNL Trigger: GAGGTTGACAAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATTTCTGCAGACTGCCCAGTTCATCTTTAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS TCA 72 bp | GCAGACGTTCGAGTAATACCAGCGGTAAAGCCACAATaGACCAGCATCCATGCGGTGGTAGATGGAGCGGTA | + |
Preference number: 6 (lower is better) Translates to: ADVRVIPAVKPQ*TSIHAVVDGAV Trigger: TACCGCTCCATCTACCACCGCATGGATGCTGGTTCATTGTGGCTTTACCGCTGGTATTACTCGAACGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS TCA 72 bp | TTGGGTGCCCAGGTTCTCTGCAATCACATACCATCCTaGGTGCGGCAATCGGTATACAGCCAGGGTGCAAAT | + |
Preference number: 6 (lower is better) Translates to: LGAQVLCNHIPS*VRQSVYSQGAN Trigger: ATTTGCACCCTGGCTGTATACCGATTGCCGCACTCAGGATGGTATGTGATTGCAGAGAACCTGGGCACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208148.2 |
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CDS CAA 90 bp | CAGCATTGGGCGGCCTTCATAGGACTGCACCTTCTGCATAATGGCTaGTTTGTGGGTTTTGTTCAGCTGCGTTTTCTGAAGCACTGGCAG | + |
Preference number: 6 (lower is better) Translates to: QHWAAFIGLHLLHNG*FVGFVQLRFLKHWQ Trigger: CTGCCAGTGCTTCAGAAAACGCAGCTGAACAAAACCCACAAACAAGCCATTATGCAGAAGGTGCAGTCCTATGAAGGCCGCCCAATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CCA 72 bp | TCTGAGTATACGCAGGGATCATCACATCAGGGTTGTTaGAAGTCGTCAGCAGCACTAGGAGTGAGGTCAGTG | + |
Preference number: 6 (lower is better) Translates to: SEYTQGSSHQGC*KSSAALGVRSV Trigger: CACTGACCTCACTCCTAGTGCTGCTGACGACTTCCAACAACCCTGATGTGATGATCCCTGCGTATACTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CAA 72 bp | AATGGAGACTGGTATTGGGGCTTCAGCGGGCGCTCTTaGGCCAAACCTTTGTCAACCTCATCGAAGAGTTTC | + |
Preference number: 6 (lower is better) Translates to: NGDWYWGFSGRS*AKPLSTSSKSF Trigger: GAAACTCTTCGATGAGGTTGACAAAGGTTTGGCCAAAGAGCGCCCGCTGAAGCCCCAATACCAGTCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS GCA 72 bp | AATACCAGCGGTAAAGCCACAATGAACCAGCATCCATaGGGTGGTAGATGGAGCGGTACTTTATGGCGTCTT | + |
Preference number: 6 (lower is better) Translates to: NTSGKATMNQHP*GGRWSGTLWRL Trigger: AAGACGCCATAAAGTACCGCTCCATCTACCACCGCATGGATGCTGGTTCATTGTGGCTTTACCGCTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS CCA 72 bp | CTCATCGAAGAGTTTCTGGAACTCATCAGCCAGCATTaGGCGGCCTTCATAGGACTGCACCTTCTGCATAAT | + |
Preference number: 6 (lower is better) Translates to: LIEEFLELISQH*AAFIGLHLLHN Trigger: ATTATGCAGAAGGTGCAGTCCTATGAAGGCCGCCCAATGCTGGCTGATGAGTTCCAGAAACTCTTCGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS CAA 72 bp | GATCAGGATCAGGAAAATGATGAAGCCCAGCACACGTaGGCAGACGTTCGAGTAATACCAGCGGTAAAGCCA | + |
Preference number: 6 (lower is better) Translates to: DQDQENDEAQHT*ADVRVIPAVKP Trigger: TGGCTTTACCGCTGGTATTACTCGAACGTCTGCCAACGTGTGCTGGGCTTCATCATTTTCCTGATCCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 ENSMUST00000209156.2 |
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CDS TCA 72 bp | GTGAAGACTATGAAGAAGAGAGCAAAGGCCCGGTTCTaGGTATACGCAGGGATCATCACATCAGGGTTGTTG | + |
Preference number: 6 (lower is better) Translates to: VKTMKKRAKARF*VYAGIITSGLL Trigger: CAACAACCCTGATGTGATGATCCCTGCGTATACTCAGAACCGGGCCTTTGCTCTCTTCTTCATAGTCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |
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CDS TCA 72 bp | GAGATTTCATTAGGTAGCCACGGAACTGATTATAGATaGTGGCTGTCAGCAGGTTCATCAGAAACAAGCTTC | + |
Preference number: 6 (lower is better) Translates to: EISLGSHGTDYR*WLSAGSSETSF Trigger: GAAGCTTGTTTCTGATGAACCTGCTGACAGCCATCATCTATAATCAGTTCCGTGGCTACCTAATGAAATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058022.6 ENSMUST00000208148.2 ENSMUST00000208328.2 ENSMUST00000208841.2 ENSMUST00000209047.2 |