Pregenerated sensors for TPCN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032741Ensembl transcript IDs: ENSMUST00000046426.10
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | CTTGGTGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTaGGGGCCCTGTCTTGCTCAGGCACCTGGCTGGTATGTGCTAGAC | + |
Preference number: 1 (lower is better) Translates to: LGVCSKVTLWGYSLA*GPCLAQAPGWYVLD Trigger: GTCTAGCACATACCAGCCAGGTGCCTGAGCAAGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 90 bp | GCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTGCTCAAAGGTaGCTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTTGCTC | + |
Preference number: 1 (lower is better) Translates to: AWLASLRVSLVCAQR*LCGATVWPEGPVLL Trigger: GAGCAAGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 90 bp | TGGGGGTGGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTaGGAGCCTGAGAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACC | + |
Preference number: 1 (lower is better) Translates to: WGWGSCGRVPATRKD*EPERVSSSVSLKGT Trigger: GGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCCACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 90 bp | GGAGGCCAAGAGCTCTTTGAAGTGGAAGGGACTTGGCCAGTCTCCTaGCTCTCTGTGGAAACCAGAGGTTTTTCCTGGGGGATAGTGTAT | + |
Preference number: 1 (lower is better) Translates to: GGQELFEVEGTWPVS*LSVETRGFSWGIVY Trigger: ATACACTATCCCCCAGGAAAAACCTCTGGTTTCCACAGAGAGTCAGGAGACTGGCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 90 bp | CAGCCTAAGCTGGTTATTTCTGGAGCTCAGGAAGACAGAGCGAGGTaGCTGGAACGGACCCTGGCTATAGTCTCTTTTCTGTCTCTGTGT | + |
Preference number: 1 (lower is better) Translates to: QPKLVISGAQEDRAR*LERTLAIVSFLSLC Trigger: ACACAGAGACAGAAAAGAGACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAAATAACCAGCTTAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCATCCGCTTTCCAGCTTaGCCCCTGGTTCTGCGGCTG | + |
Preference number: 2 (lower is better) Translates to: QSALSPLGRSSVVVPTECIRFPA*PLVLRL Trigger: CAGCCGCAGAACCAGGGGTCAAGCTGGAAAGCGGAT...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GGGCCGGACACTGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTTGTGGGGCTACAGTTTaGCCTGAGGGCCCTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: GPDTVPTECPIPTREKQRCGATV*PEGPVL Trigger: CAAGACAGGGCCCTCAGGCCAAACTGTAGCCCCACA...ACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCTCTTGCTCAGGCACCTaGCTGGTATGTGCTAGACCC | + |
Preference number: 2 (lower is better) Translates to: QSALSPLGRSSVVVPTECSCSGT*LVCARP Trigger: GGGTCTAGCACATACCAGCCAGGTGCCTGAGCAAGA...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR GCA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTCTTGACCCCTGGTTCTaGGGCTGGGAGAACAGGAGG | + |
Preference number: 2 (lower is better) Translates to: CVLKGDSVGLQFGLRALSLDPWF*GWENRR Trigger: CCTCCTGTTCTCCCAGCCGCAGAACCAGGGGTCAAG...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCAAGGCCAGGTTAGCCTaGAGGGAGTGCGCAGGGGTG | + |
Preference number: 2 (lower is better) Translates to: SSHSAEWREGASSLDRDPKARLA*RECAGV Trigger: CACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTT...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGACAAGTCACCTGACCTaGCTCGCCACCCCTACCCAC | + |
Preference number: 2 (lower is better) Translates to: ATSSHSAEWREGASSLDRTSHLT*LATPTH Trigger: GTGGGTAGGGGTGGCGAGTCAGGTCAGGTGACTTGT...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGAATTCCCAGGGCCTCTaGTTGGCTTTCTCCTGCATG | + |
Preference number: 2 (lower is better) Translates to: AYSPGRHSLFPAWLASLRNSQGL*LAFSCM Trigger: CATGCAGGAGAAAGCCAACCAGAGGCCCTGGGAATT...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GGGCCGGACACTGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTACCAGAGGTTTTTCCTaGGGGATAGTGTATGTATTG | + |
Preference number: 2 (lower is better) Translates to: GPDTVPTECPIPTREKQRTRGFS*GIVYVL Trigger: CAATACATACACTATCCCCCAGGAAAAACCTCTGGT...ACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAATCTCCTGACTCTCTGTaGAAACCAGAGGTTTTTCCT | + |
Preference number: 2 (lower is better) Translates to: REKQRGGSHRVPYPHSGESPDSL*KPEVFP Trigger: AGGAAAAACCTCTGGTTTCCACAGAGAGTCAGGAGA...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCAGGCCAAGAGCTCTTTaGAGTGGAAGGGACTTGGCC | + |
Preference number: 2 (lower is better) Translates to: SSHSAEWREGASSLDRDPRPRAL*SGRDLA Trigger: GGCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCT...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGGAGCTCCGCCAGGCCTaGGCCTCCAGCCTAAGCTGG | + |
Preference number: 2 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLELRQA*ASSLSW Trigger: CCAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTC...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTACTGCTTCTCAGGGTTaGGAACTGGAGTCCAAGTGG | + |
Preference number: 2 (lower is better) Translates to: RHSLFPAWLASLRVSLVCTASQG*ELESKW Trigger: CCACTTGGACTCCAGTTCCCAACCCTGAGAAGCAGT...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CAA 90 bp | TTCTCAGGGTTGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTaGAAGTGGAAGGGACTTGGCCAGTCTCCTGACTCTCTGTGGAAA | + |
Preference number: 2 (lower is better) Translates to: FSGLGTGVQVEAKSS*KWKGLGQSPDSLWK Trigger: TTTCCACAGAGAGTCAGGAGACTGGCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAACCCTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | GGACTTGGCCAGTCTCCTGACTCTCTGTGGAAACCAGAGGTTTTTCCTGGGGGATACCCACCTAGCTTATaGGAATCTTGGAGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: GLGQSPDSLWKPEVFPGGYPPSL*ESWRRQ Trigger: CTGCCTCCTCCAAGATTCTCATAAGCTAGGTGGGTA...TCCCCCAGGAAAAACCTCTGGTTTCCACAGAGAGTCAGGAGACTGGCCAAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGCAACAAGAAAGGACTaGGAGCCTGAGAGAGTAAGC | + |
Preference number: 2 (lower is better) Translates to: ATSSHSAEWREGASSLDRATRKD*EPERVS Trigger: GCTTACTCTCTCAGGCTCCCAGTCCTTTCTTGTTGC...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCTTTAGTACCTCTACATaGGGCCCAAGACCAGTCCCT | + |
Preference number: 2 (lower is better) Translates to: SSHSAEWREGASSLDRDPFSTST*GPRPVP Trigger: AGGGACTGGTCTTGGGCCCCATGTAGAGGTACTAAA...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | TTGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTGGAAGGGACTTAAAGGACTGGGAGCCTaGGAGAGTAAGCTCTTCTGT | + |
Preference number: 2 (lower is better) Translates to: LGTGVQVEAKSSLKWKGLKGLGA*ESKLFC Trigger: ACAGAAGAGCTTACTCTCTCAGGCTCCCAGTCCTTT...AAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGGAAGACAGAGCGAGGTaGCTGGAACGGACCCTGGCT | + |
Preference number: 2 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLEDRAR*LERTLA Trigger: AGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTC...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GTGGCTCTTAACCCATACAAAATGATTGTCTGCACGGTGTGGAGTAAGGCTGGGGCCTCCAGCCTAAGCTaGTTATTTCTGGAGCTCAGG | + |
Preference number: 2 (lower is better) Translates to: VALNPYKMIVCTVWSKAGASSLS*LFLELR Trigger: CCTGAGCTCCAGAAATAACCAGCTTAGGCTGGAGGC...CCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CCA 90 bp | GTGGCTCTTAACCCATACAAAATGATTGTCTGCACGGTGTGGAGTAAGGCTGGGAGTCTGTTCCCTGCCTaGCTAGCAAGTTTGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: VALNPYKMIVCTVWSKAGSLFPA*LASLRV Trigger: GACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACT...CCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR TCA 90 bp | GTGGCTCTTAACCCATACAAAATGATTGTCTGCACGGTGTGGAGTAAGGCTGGGAACCGGCTATGGAAATaGAACTGCTTCTCAGGGTTG | + |
Preference number: 2 (lower is better) Translates to: VALNPYKMIVCTVWSKAGNRLWK*NCFSGL Trigger: CAACCCTGAGAAGCAGTTTCATTTCCATAGCCGGTT...CCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR GCA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGATACTATGGTGTTATTaGATAGAAGAGGCTGGCTTG | + |
Preference number: 2 (lower is better) Translates to: ATSSHSAEWREGASSLDRILWCY*IEEAGL Trigger: CAAGCCAGCCTCTTCTATGCAATAACACCATAGTAT...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | AGCGAGAGGGAGGGGCCGGACACTGTTCCCACAGAGTaGCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGT | + |
Preference number: 3 (lower is better) Translates to: SEREGPDTVPTE*PIPTREKQRGG Trigger: ACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCCCTCCCTCTCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | AAGTCAAATTCCCAGGGCCTCTGGTTGGCTTTCTCCTaGATGGAGGGATCCTGCCGGGGGTGGGGGTGGGGG | + |
Preference number: 3 (lower is better) Translates to: KSNSQGLWLAFS*MEGSCRGWGWG Trigger: CCCCCACCCCCACCCCCGGCAGGATCCCTCCATGCAGGAGAAAGCCAACCAGAGGCCCTGGGAATTTGACTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | CCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTaGCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGT | + |
Preference number: 3 (lower is better) Translates to: PLGRSSVVVPTE*PIPTREKQRGG Trigger: ACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | AGGCAACTTCGGGCCCTGCCCACCTTCAGCCCCTTGTaGACAACACAGCAGGGCTCCATCGCTCTGCCACCA | + |
Preference number: 3 (lower is better) Translates to: RQLRALPTFSPL*TTQQGSIALPP Trigger: TGGTGGCAGAGCGATGGAGCCCTGCTGTGTTGTCCACAAGGGGCTGAAGGTGGGCAGGGCCCGAAGTTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | CACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTaGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGG | + |
Preference number: 3 (lower is better) Translates to: HRVPYPHSGEAA*WFPQSALSPLG Trigger: CCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | TGCCTGCCCACTCCAACTCCCAAGCAACAGCAGGTTTaGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGG | + |
Preference number: 3 (lower is better) Translates to: CLPTPTPKQQQV*KARLAWRECAG Trigger: CCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTGGGAGTTGGAGTGGGCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | AGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTaGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGA | + |
Preference number: 3 (lower is better) Translates to: RVPYPHSGEAAW*FPQSALSPLGR Trigger: TCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | CGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTaGTTATTTCTGGAGCTCAGGAAGACAGAGCGAGGT | + |
Preference number: 3 (lower is better) Translates to: RELRQAWASSLS*LFLELRKTERG Trigger: ACCTCGCTCTGTCTTCCTGAGCTCCAGAAATAACCAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | CAGCGTGGTGGTTCCGTAGCTGCCCCTGCTAGGCTGTaGCACGGAGCCACTAGTTCTCACTCTGCTGAATGG | + |
Preference number: 3 (lower is better) Translates to: QRGGSVAAPARL*HGATSSHSAEW Trigger: CCATTCAGCAGAGTGAGAACTAGTGGCTCCGTGTCACAGCCTAGCAGGGGCAGCTACGGAACCACCACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGCCTGAGGGCCCTGTCTaGCTCAGGCACCTGGCTGGT | + |
Preference number: 3 (lower is better) Translates to: ATSSHSAEWREGASSLDRPEGPV*LRHLAG Trigger: ACCAGCCAGGTGCCTGAGCAAGACAGGGCCCTCAGG...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTACACAGACACCTGTGTaGGCTGGGGTTCAGGTAGGG | + |
Preference number: 3 (lower is better) Translates to: CVLKGDSVGLQFGLRALSTQTPV*AGVQVG Trigger: CCCTACCTGAACCCCAGCCAACACAGGTGTCTGTGT...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | TGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTaGGGGCCCTGTCTTGCTCAGGCACCTGGCTGGTAT | + |
Preference number: 3 (lower is better) Translates to: CSKVTLWGYSLA*GPCLAQAPGWY Trigger: ATACCAGCCAGGTGCCTGAGCAAGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | CTCAGCTTACAGCCCTGGGCGACACAGTCTGTTCCCTaGCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTG | + |
Preference number: 3 (lower is better) Translates to: LSLQPWATQSVP*LASKFEGQLGV Trigger: CACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | CAGTTTGGCCTGAGGGCCCTGTCTTGCTCAGGCACCTaGCTGGTATGTGCTAGACCCAGGGGTTTTAGTACC | + |
Preference number: 3 (lower is better) Translates to: QFGLRALSCSGT*LVCARPRGFST Trigger: GGTACTAAAACCCCTGGGTCTAGCACATACCAGCCAGGTGCCTGAGCAAGACAGGGCCCTCAGGCCAAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTaGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: AYSPGRHSLFPA*LASLRVSLVCA Trigger: AGCACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | GCAAGTTTGAGGGTCAGCTTGGTGTGTGCTCAAAGGTaGCTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCT | + |
Preference number: 3 (lower is better) Translates to: ASLRVSLVCAQR*LCGATVWPEGP Trigger: AGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACACCAAGCTGACCCTCAAACTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTGAGGCCAAGAGCTCTTaGAAGTGGAAGGGACTTGGC | + |
Preference number: 3 (lower is better) Translates to: RHSLFPAWLASLRVSLVCEAKSS*KWKGLG Trigger: GCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTC...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | GGGGCTGCCTTCAGCACCAGTTCAAATGAACTCCCCTaGGCAAGTCAAATTCCCAGGGCCTCTGGTTGGCTT | + |
Preference number: 3 (lower is better) Translates to: GAAFSTSSNELP*ASQIPRASGWL Trigger: AAGCCAACCAGAGGCCCTGGGAATTTGACTTGCTCAGGGGAGTTCATTTGAACTGGTGCTGAAGGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | TGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTaGAGTGGAAGGGACTTGGCCAGTCTCCTGACTCTC | + |
Preference number: 3 (lower is better) Translates to: WELESKWRPRAL*SGRDLASLLTL Trigger: GAGAGTCAGGAGACTGGCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | TGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTaGTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCC | + |
Preference number: 3 (lower is better) Translates to: CLASKFEGQLGV*SKVTLWGYSLA Trigger: GGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | ACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTaGAAGGGACTTGGCCAGTCTCCTGACTCTCTGTGG | + |
Preference number: 3 (lower is better) Translates to: TGVQVEAKSSLK*KGLGQSPDSLW Trigger: CCACAGAGAGTCAGGAGACTGGCCAAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAATACTATGGTGTTATaGCATAGAAGAGGCTGGCTT | + |
Preference number: 3 (lower is better) Translates to: LGRSSVVVPTECPIPTRENTMVL*HRRGWL Trigger: AAGCCAGCCTCTTCTATGCAATAACACCATAGTATT...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTTATTTAAGGGGCTTCTaGAGCAGAGGGCTTCCAGAG | + |
Preference number: 3 (lower is better) Translates to: CVLKGDSVGLQFGLRALSYLRGF*SRGLPE Trigger: CTCTGGAAGCCCTCTGCTCAAGAAGCCCCTTAAATA...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCCAAGCAACAGCAGGTTaGGAAGGCCAGGTTAGCCTG | + |
Preference number: 3 (lower is better) Translates to: SSHSAEWREGASSLDRDPQATAG*EGQVSL Trigger: CAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | CCTGACCTGACTCGCCACCCCTACCCACCTAGCTTATaGGAATCTTGGAGGAGGCAGTGTGAAAGTGTGGTT | + |
Preference number: 3 (lower is better) Translates to: PDLTRHPYPPSL*ESWRRQCESVV Trigger: AACCACACTTTCACACTGCCTCCTCCAAGATTCTCATAAGCTAGGTGGGTAGGGGTGGCGAGTCAGGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | GAGCTCTTTGAAGTGGAAGGGACTTGGCCAGTCTCCTaGCTCTCTGTGGAAACCAGAGGTTTTTCCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: ELFEVEGTWPVS*LSVETRGFSWG Trigger: CCCCCAGGAAAAACCTCTGGTTTCCACAGAGAGTCAGGAGACTGGCCAAGTCCCTTCCACTTCAAAGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | GGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTaGGAGCCTGAGAGAGTAAGCTCTTCTGTCTCCCTC | + |
Preference number: 3 (lower is better) Translates to: GSCGRVPATRKD*EPERVSSSVSL Trigger: GAGGGAGACAGAAGAGCTTACTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | AGCAGGGCTCCATCGCTCTGCCACCATATACTATGGTaGCCTCAAAAGAACTCCCACAAGTCACCTGACCTG | + |
Preference number: 3 (lower is better) Translates to: SRAPSLCHHILW*PQKNSHKSPDL Trigger: CAGGTCAGGTGACTTGTGGGAGTTCTTTTGAGGCCACCATAGTATATGGTGGCAGAGCGATGGAGCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR TCA 72 bp | AACCTTCCGACGACGTGGCTCTTAACCCATACAAAATaGTTGTCTGCACGGTGTGGAGTAAGGCTGGGGTGG | + |
Preference number: 3 (lower is better) Translates to: NLPTTWLLTHTK*LSARCGVRLGW Trigger: CCACCCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCACGTCGTCGGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | CTGGTTATTTCTGGAGCTCAGGAAGACAGAGCGAGGTaGCTGGAACGGACCCTGGCTATAGTCTCTTTTCTG | + |
Preference number: 3 (lower is better) Translates to: LVISGAQEDRAR*LERTLAIVSFL Trigger: CAGAAAAGAGACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAAATAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR GCA 72 bp | CCTCTTTATAGGCCTCCCCTCTTTCTGCTTCCAAAATaGCCCTCACACACAAAGAAGCTAAGGCAACCGGCT | + |
Preference number: 3 (lower is better) Translates to: PLYRPPLFLLPK*PSHTKKLRQPA Trigger: AGCCGGTTGCCTTAGCTTCTTTGTGTGTGAGGGGCATTTTGGAAGCAGAAAGAGGGGAGGCCTATAAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR-3UTR CAA 90 bp | GGACTTGGCCAGTCTCCTGACTCTCTGTGGAAACCAGAGGTTTTTCCTGGGGGATTCTTCCTAGTGGTTTaGATCCTCATACCAGACACA | + |
Preference number: 3 (lower is better) Translates to: GLGQSPDSLWKPEVFPGGFFLVV*ILIPDT Trigger: TGTGTCTGGTATGAGGATCAAAACCACTAGGAAGAA...TCCCCCAGGAAAAACCTCTGGTTTCCACAGAGAGTCAGGAGACTGGCCAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CCA 72 bp | GCTATGGAAATGAAACTGCTTCTCAGGGTTGGGAACTaGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTG | + |
Preference number: 3 (lower is better) Translates to: AMEMKLLLRVGN*SPSGGQELFEV Trigger: CACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAACCCTGAGAAGCAGTTTCATTTCCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAACGGGTCACCCGCACGTaGGACGTCTGCCGAACCAGC | + |
Preference number: 4 (lower is better) Translates to: REKQRGGSHRVPYPHSGERVTRT*DVCRTS Trigger: GCTGGTTCGGCAGACGTCCCACGTGCGGGTGACCCG...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGACAGTCTGGGAGCGCTaGCGACTGCCAGGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLTVWER*RLPGGC Trigger: GCAGCCCCCTGGCAGTCGCCAGCGCTCCCAGACTGT...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCGGGCACGCTGCCCCTaGGCTTCTGCTGCTCCTGTT | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECRARCP*ASAAPV Trigger: AACAGGAGCAGCAGAAGCTCAGGGGCAGCGTGCCCG...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CAA 72 bp | GCTAGGCAACTTCGGGCCCTGCCCACCTTCAGCCCCTaGTGGACAACACAGCAGGGCTCCATCGCTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: ARQLRALPTFSP*WTTQQGSIALP Trigger: TGGCAGAGCGATGGAGCCCTGCTGTGTTGTCCACAAGGGGCTGAAGGTGGGCAGGGCCCGAAGTTGCCTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCTACAGGCGGCTCCAGTaGGACGTCTGCGAGGTGACG | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECYRRLQ*DVCEVT Trigger: CGTCACCTCGCAGACGTCCCACTGGAGCCGCCTGTA...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGGAGCAGGGCCGTaGGCAGCTCCATCATGTAGA | + |
Preference number: 4 (lower is better) Translates to: REKQRGGSHRVPYPHSGEAGAGP*AAPSCR Trigger: TCTACATGATGGAGCTGCTCACGGCCCTGCTCCTGC...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGCTCCAGTGGGACGTCTaGGAGGTGACGCCTTCCATG | + |
Preference number: 4 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLLQWDV*EVTPSM Trigger: CATGGAAGGCGTCACCTCGCAGACGTCCCACTGGAG...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGCCGAGTCCTGGCTCTTaGGGCTGTAGTTCATGCGGA | + |
Preference number: 4 (lower is better) Translates to: LGRSSVVVPTECPIPTREPSPGS*GCSSCG Trigger: TCCGCATGAACTACAGCCGCAAGAGCCAGGACTCGG...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CAAGCAACAGCAGGTTTGGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGGGTCTGCCCCTGAGCTTCTaGTGCTCCTGTTCCCGGGCA | + |
Preference number: 4 (lower is better) Translates to: QATAGLEGQVSLEGVRRGLPLSF*CSCSRA Trigger: TGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGGCAG...ACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGCTGGGCAGCTGCTCTTaGCCCAGGCTGTTCGAAGGA | + |
Preference number: 4 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLLGSCS*PRLFEG Trigger: TCCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAG...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGACTGCCTGTAGGAGATaGCAGCCGGCCTCCGTTGGC | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRTACRR*QPASVG Trigger: GCCAACGGAGGCCGGCTGGCATCTCCTACAGGCAGT...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GTGCTAGGCAACTTCGGGCCCTGCCCACCTTCAGCCCCTTGTGGACAACACAGCTGCCCCCATTTTTGCTaGGCAGCTGCTCTTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: VLGNFGPCPPSAPCGQHSCPHFC*AAALGP Trigger: TGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCA...GCTGTGTTGTCCACAAGGGGCTGAAGGTGGGCAGGGCCCGAAGTTGCCTAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGCAAATACCACCACCATaGGGGCAAAGAGTTCCAGCG | + |
Preference number: 4 (lower is better) Translates to: LGRSSVVVPTECPIPTREQIPPP*GQRVPA Trigger: CGCTGGAACTCTTTGCCCTCATGGTGGTGGTATTTG...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCTGTGGATGCTGTGGCTaGCCCCATTTTTGCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECCGCCG*PHFCWA Trigger: TGCCCAGCAAAAATGGGGGCAGCCACAGCATCCACA...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTGGGAGTTGTGGATaGTGTGGCTGCCCCCATTTT | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECPGSCG*CGCPHF Trigger: AAAATGGGGGCAGCCACAGCATCCACAACTCCCAGG...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGTCCTGTTCCCGGGCATaGTCCTCGTACCACTCCTGG | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRSCSRA*SSYHSW Trigger: CCAGGAGTGGTACGAGGAGCATGCCCGGGAACAGGA...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | TTCTGGAGCTCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTCCCCTGAGCTTCTGCTaGTCCTGTTCCCGGGCATGC | + |
Preference number: 4 (lower is better) Translates to: FWSSGRQSEVAGTDPGYSPLSFC*SCSRAC Trigger: GCATGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGG...ACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGTGCCGGACGAACGTGTaGAAGCCCAGCCACCGCAAT | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRCRTNV*KPSHRN Trigger: ATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCA...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CAAGCAACAGCAGGTTTGGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGGGTAATAACCTCAGCAGCTaGAGGGGACGCAGGACCACA | + |
Preference number: 4 (lower is better) Translates to: QATAGLEGQVSLEGVRRGNNLSS*RGRRTT Trigger: TGTGGTCCTGCGTCCCCTTCAGCTGCTGAGGTTATT...ACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CAAGCAACAGCAGGTTTGGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGGGTAGTCCACCAGGAAAATaGAGCGTAGTGCCCGGGTCA | + |
Preference number: 4 (lower is better) Translates to: QATAGLEGQVSLEGVRRGSPPGK*SVVPGS Trigger: TGACCCGGGCACTACGCTGCATTTTCCTGGTGGACT...ACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGCCACTGTGCTGGTGTTaGAGCAGTTGGGGGTCAGCC | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLREPLCWC*SSWGSA Trigger: GGCTGACCCCCAACTGCTGCAACACCAGCACAGTGG...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGCGTAGGCATGCTGGATaGCGGTCCGTTTGTGCAGCA | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRRRHAG*RSVCAA Trigger: TGCTGCACAAACGGACCGCCATCCAGCATGCCTACG...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCGCAGCAGCTCAAACATaGTGTCCAACACGTTGCGGT | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECAAAQT*CPTRCG Trigger: ACCGCAACGTGTTGGACACCATGTTTGAGCTGCTGC...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GTGCTAGGCAACTTCGGGCCCTGCCCACCTTCAGCCCCTTGTGGACAACACAGCTCCTCGTACCACTCCTaGATCTCCTCCTGGTACATC | + |
Preference number: 4 (lower is better) Translates to: VLGNFGPCPPSAPCGQHSSSYHS*ISSWYI Trigger: GATGTACCAGGAGGAGATCCAGGAGTGGTACGAGGA...GCTGTGTTGTCCACAAGGGGCTGAAGGTGGGCAGGGCCCGAAGTTGCCTAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGCATCCTTGGGGTGGGTaGAGAACTTGTCGTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLHPWGG*RTCRCS Trigger: AGAACAACGACAAGTTCTTCACCCACCCCAAGGATG...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAAGTAGGAGGGCATCATaGCATCTGGAAAGTTGGCTG | + |
Preference number: 4 (lower is better) Translates to: REKQRGGSHRVPYPHSGESRRAS*HLESWL Trigger: CAGCCAACTTTCCAGATGTCATGATGCCCTCCTACT...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAACCAGGGCACATGCTTTaGGGTGAAATTCCCACCTTT | + |
Preference number: 4 (lower is better) Translates to: REKQRGGSHRVPYPHSGEPGHML*GEIPTF Trigger: AAAGGTGGGAATTTCACCTCAAAGCATGTGCCCTGG...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGAGAGACTGGAAGATCTaGCGCAGGTTGCGCCGTACA | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRRDWKI*RRLRRT Trigger: TGTACGGCGCAACCTGCGGCAGATCTTCCAGTCTCT...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTACAGGAGGATGTCCATaGAGGGTGGGAGAGACTGGA | + |
Preference number: 4 (lower is better) Translates to: CVLKGDSVGLQFGLRALSTGGCP*RVGETG Trigger: TCCAGTCTCTCCCACCCTTCATGGACATCCTCCTGT...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGGGAGAACGAACAGGTTaGCGATGCTGTTCTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLREGERTG*RCCSPG Trigger: CCCTGGAGAACAGCATCGTCAACCTGTTCGTTCTCC...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CAAGCAACAGCAGGTTTGGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGGGTGCTTTTCAATGTCGTTaGAGGTGTCGAACACCACGG | + |
Preference number: 4 (lower is better) Translates to: QATAGLEGQVSLEGVRRGAFQCR*RCRTPR Trigger: CCGTGGTGTTCGACACCTTCAACGACATTGAAAAGC...ACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCGACGCAGGACCACAATaGAATAGAAGGGTTCCATGT | + |
Preference number: 4 (lower is better) Translates to: QSALSPLGRSSVVVPTECDAGPQ*NRRVPC Trigger: ACATGGAACCCTTCTATTTCATTGTGGTCCTGCGTC...GCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAGGTCACGAAGCTGTTaGGGATGTTGTCAAAGTTGT | + |
Preference number: 4 (lower is better) Translates to: LGRSSVVVPTECPIPTRERSRSC*GCCQSC Trigger: ACAACTTTGACAACATCCTCAACAGCTTCGTGACCT...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCGGCTGCCCCCATTTTTaGTGGGCAGCTGCTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: SSHSAEWREGASSLDRDPGCPHF*WAAALG Trigger: GCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCC...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGCAGGAAGCGTTCCCTTaGACTCATCCGGGGCTTGTA | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLREQEAFP*THPGLV Trigger: TACAAGCCCCGGATGAGTGCAAGGGAACGCTTCCTG...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGGGGAGCGCTGGCGACTaGCAGGGGGCTGCTGGGCTG | + |
Preference number: 4 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLGSAGD*QGAAGL Trigger: CAGCCCAGCAGCCCCCTGGCAGTCGCCAGCGCTCCC...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGCTGTCTGTTTCTCTTTaGCTTCCACTGCAGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: AYSPGRHSLFPAWLASLRLSVSL*LPLQSS Trigger: GCTGCTCTGCAGTGGAAGGCAAAGAGAAACAGACAG...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | TTGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTGGAAGGGACTTAGGCGTCGGCCACTGTaGTGGTGTTGCAGCAGTTGG | + |
Preference number: 4 (lower is better) Translates to: LGTGVQVEAKSSLKWKGLRRRPL*WCCSSW Trigger: CCAACTGCTGCAACACCAGCACAGTGGCCGACGCCT...AAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGCGTCCAAGGTCAGGATaGGCGGCACATCGTCATCTA | + |
Preference number: 4 (lower is better) Translates to: ATSSHSAEWREGASSLDRRPRSG*AAHRHL Trigger: TAGATGACGATGTGCCGCTCATCCTGACCTTGGACG...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | TTCTGGAGCTCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTCCACCACCAAGTACATaGAATACTGGAAGGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: FWSSGRQSEVAGTDPGYSPPPST*NTGRPW Trigger: CCAAGGCCTTCCAGTATTTCATGTACTTGGTGGTGG...ACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCGGATCCAGACACCGTTaGCAGCCACCACCAAGTACA | + |
Preference number: 4 (lower is better) Translates to: SSHSAEWREGASSLDRDPGSRHR*QPPPST Trigger: TGTACTTGGTGGTGGCTGTCAACGGTGTCTGGATCC...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGATGGCGGTCCGTTTGTaGAGCAGCAAAGACTTGAAC | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLREMAVRL*SSKDLN Trigger: GTTCAAGTCTTTGCTGCTGCACAAACGGACCGCCAT...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | TCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTCTCTTTTCTTGCGGCTGTAGTTCATaGGGAAGACGAAGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SGRQSEVAGTDPGYSLFSCGCSS*GRRRPP Trigger: TGGAGGCCTTCGTCTTCCGCATGAACTACAGCCGCA...AGAAAAGAGACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | TTGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTGGAAGGGACTTACCAGACTGGGGACCTaGGAGTTGTGGATGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: LGTGVQVEAKSSLKWKGLTRLGT*ELWMLW Trigger: CCACAGCATCCACAACTCCCAGGTCCCCAGTCTGGT...AAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGAAGGGTGGGAGAGACTaGAAGATCTGCCGCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: ATSSHSAEWREGASSLDRKGGRD*KICRRL Trigger: CAACCTGCGGCAGATCTTCCAGTCTCTCCCACCCTT...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | TTCTGGAGCTCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTGATGTCCATGAAGGGTaGGAGAGACTGGAAGATCTG | + |
Preference number: 4 (lower is better) Translates to: FWSSGRQSEVAGTDPGYSDVHEG*ERLEDL Trigger: CAGATCTTCCAGTCTCTCCCACCCTTCATGGACATC...ACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGCTGGAAAGTTGGCTGTaGTCAGGAGAACGAACAGGT | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLRELESWL*SGERTG Trigger: ACCTGTTCGTTCTCCTGACCACAGCCAACTTTCCAG...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTGACTCAGGTCACTTTTaGTTCTCGATCGCCGTCCCA | + |
Preference number: 4 (lower is better) Translates to: RHSLFPAWLASLRVSLVCDSGHF*FSIAVP Trigger: TGGGACGGCGATCGAGAACCAAAAGTGACCTGAGTC...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | CAAGCAACAGCAGGTTTGGAAGGCCAGGTTAGCCTGGAGGGAGTGCGCAGGGGTGGTCGGAAGGATTTGTaGAGAATAAGTAGAAACCGA | + |
Preference number: 4 (lower is better) Translates to: QATAGLEGQVSLEGVRRGGRKDL*RISRNR Trigger: TCGGTTTCTACTTATTCTCCACAAATCCTTCCGACC...ACCCCTGCGCACTCCCTCCAGGCTAACCTGGCCTTCCAAACCTGCTGTTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCTGGAGAGGTATACAATaGAGAAGACGCAGGACCAGG | + |
Preference number: 4 (lower is better) Translates to: SSHSAEWREGASSLDRDPWRGIQ*RRRRTR Trigger: CCTGGTCCTGCGTCTTCTTCATTGTATACCTCTCCA...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTCTATGTAAAAGGTCATaGAGTACAGGCGGCTCCAGT | + |
Preference number: 4 (lower is better) Translates to: RHSLFPAWLASLRVSLVCLCKRS*STGGSS Trigger: ACTGGAGCCGCCTGTACTTCATGACCTTTTACATAG...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | TTCTGGAGCTCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTGCAGCAGCAAAGACTTaGACTTGTGCTTTTCAATGT | + |
Preference number: 4 (lower is better) Translates to: FWSSGRQSEVAGTDPGYSAAAKT*TCAFQC Trigger: ACATTGAAAAGCACAAGTTCAAGTCTTTGCTGCTGC...ACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGAGCTCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | TTGGGAACTGGAGTCCAAGTGGAGGCCAAGAGCTCTTTGAAGTGGAAGGGACTTACTCCATGCCCACGATaGCGAAGGAATAGTAGAAGG | + |
Preference number: 4 (lower is better) Translates to: LGTGVQVEAKSSLKWKGLTPCPR*RRNSRR Trigger: CCTTCTACTATTCCTTCGCCATCGTGGGCATGGAGT...AAGTCCCTTCCACTTCAAAGAGCTCTTGGCCTCCACTTGGACTCCAGTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTTGGTCATCACCACCATaGTCACTATGTAAAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: CVLKGDSVGLQFGLRALSWSSPP*SLCKRS Trigger: TGACCTTTTACATAGTGACCATGGTGGTGATGACCA...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
3UTR CAA 72 bp | TCATCCTGCAGGGTGTGGGGTTTCTTCCTAGTGGTTTaGATCCTCATACCAGACACAGACACCTGTGTTGGC | + |
Preference number: 4 (lower is better) Translates to: SSCRVWGFFLVV*ILIPDTDTCVG Trigger: GCCAACACAGGTGTCTGTGTCTGGTATGAGGATCAAAACCACTAGGAAGAAACCCCACACCCTGCAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | GGGGGAGTTGTGGTAGGGTTCCAGCAACAAGAAAGGACTGGGAGCCTGAGAGAGTGTTGTCAAAGTTGTTaGGATAGTAGTAGCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: GGVVVGFQQQERTGSLRECCQSC*DSSSLP Trigger: AGGAAGGCTACTACTATCTCAACAACTTTGACAACA...CTCTCTCAGGCTCCCAGTCCTTTCTTGTTGCTGGAACCCTACCACAACTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GTGGCTCTTAACCCATACAAAATGATTGTCTGCACGGTGTGGAGTAAGGCTGGGAGAGGCGTGTTGCTCTaGTTCAAGGCCTTGAAAGTC | + |
Preference number: 4 (lower is better) Translates to: VALNPYKMIVCTVWSKAGRGVLL*FKALKV Trigger: GACTTTCAAGGCCTTGAACCAGAGCAACACGCCTCT...CCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCTTCCTGGAGGTAGATTaGCGCCTCTTGATAATTCAT | + |
Preference number: 4 (lower is better) Translates to: SSHSAEWREGASSLDRDPFLEVD*RLLIIH Trigger: ATGAATTATCAAGAGGCGGCAATCTACCTCCAGGAA...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGGAGTTGTGGATGCTGTaGCTGCCCCCATTTTTGCTG | + |
Preference number: 4 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLELWML*LPPFLL Trigger: CAGCAAAAATGGGGGCAGCCACAGCATCCACAACTC...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CCA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCGTCCCAGAAACACCATaGAATTTTGCTGGTATTTCT | + |
Preference number: 4 (lower is better) Translates to: SSHSAEWREGASSLDRDPVPETP*NFAGIS Trigger: AGAAATACCAGCAAAATTCCATGGTGTTTCTGGGAC...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR TCA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGGGCCAGCCACCTTCATaGACAGTTCAACTCCATAGA | + |
Preference number: 4 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLGQPPS*TVQLHR Trigger: TCTATGGAGTTGAACTGTTCATGAAGGTGGCTGGCC...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR GCA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTAAAGACTTGAACTTGTaGTTTTCAATGTCGTTGAAG | + |
Preference number: 4 (lower is better) Translates to: RHSLFPAWLASLRVSLVCKDLNL*FSMSLK Trigger: CTTCAACGACATTGAAAAGCACAAGTTCAAGTCTTT...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | GGGGGCTGCTGGGCTGCAGGGCCGGGCACGCTGCCCCTGAGCTTCTaGTGCTCCTGTTCCCGGGCATGCTCCTCGTACCACTCCTGGATC | + |
Preference number: 5 (lower is better) Translates to: GGCWAAGPGTLPLSF*CSCSRACSSYHSWI Trigger: GATCCAGGAGTGGTACGAGGAGCATGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGGCAGCGTGCCCGGCCCTGCAGCCCAGCAGCCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | GGCTGCTGGGCTGCAGGGCCGGGCACGCTGCCCCTGAGCTTCTGCTaGTCCTGTTCCCGGGCATGCTCCTCGTACCACTCCTGGATCTCC | + |
Preference number: 5 (lower is better) Translates to: GCWAAGPGTLPLSFC*SCSRACSSYHSWIS Trigger: GGAGATCCAGGAGTGGTACGAGGAGCATGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGGCAGCGTGCCCGGCCCTGCAGCCCAGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | AGGAAAATGCAGCGTAGTGCCCGGGTCACCCGCACGTGGGACGTCTaGCGAACCAGCACCACAATGGCCTCGATGAACTGCACCACGAGG | + |
Preference number: 5 (lower is better) Translates to: RKMQRSARVTRTWDV*RTSTTMASMNCTTR Trigger: CCTCGTGGTGCAGTTCATCGAGGCCATTGTGGTGCTGGTTCGGCAGACGTCCCACGTGCGGGTGACCCGGGCACTACGCTGCATTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 90 bp | TTGTGGATGCTGTGGCTGCCCCCATTTTTGCTGGGCAGCTGCTCTTaGCCCAGGCTGTTCGAAGGAGGCAGCGGAGCACTCTCAGCCTCG | + |
Preference number: 5 (lower is better) Translates to: LWMLWLPPFLLGSCS*PRLFEGGSGALSAS Trigger: CGAGGCTGAGAGTGCTCCGCTGCCTCCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGCATCCACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 90 bp | CAGTCCACCAGGAAAATGCAGCGTAGTGCCCGGGTCACCCGCACGTaGGACGTCTGCCGAACCAGCACCACAATGGCCTCGATGAACTGC | + |
Preference number: 5 (lower is better) Translates to: QSTRKMQRSARVTRT*DVCRTSTTMASMNC Trigger: GCAGTTCATCGAGGCCATTGTGGTGCTGGTTCGGCAGACGTCCCACGTGCGGGTGACCCGGGCACTACGCTGCATTTTCCTGGTGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GGGCCGGACACTGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTCTGAGCAGAGGCGTGTaGCTCTGGTTCAAGGCCTTG | + |
Preference number: 5 (lower is better) Translates to: GPDTVPTECPIPTREKQRLSRGV*LWFKAL Trigger: CAAGGCCTTGAACCAGAGCAACACGCCTCTGCTCAG...ACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | GGGGCTTGTAGAAGCGCATTAAGCCTTCGAACTGCCTGTAGGAGATaGCAGCCGGCCTCCGTTGGCTGGCAAGCAGGCCGTAGGCATGCT | + |
Preference number: 5 (lower is better) Translates to: GACRSALSLRTACRR*QPASVGWQAGRRHA Trigger: AGCATGCCTACGGCCTGCTTGCCAGCCAACGGAGGCCGGCTGGCATCTCCTACAGGCAGTTCGAAGGCTTAATGCGCTTCTACAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTGCTGGGCAGCTGCTCTaGGCCCAGGCTGTTCGAAGG | + |
Preference number: 5 (lower is better) Translates to: CVLKGDSVGLQFGLRALSAGQLL*AQAVRR Trigger: CCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGC...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GGGCCGGACACTGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTTTGACCATGGTACGTTaGTGCCGGACGAACGTGTGG | + |
Preference number: 5 (lower is better) Translates to: GPDTVPTECPIPTREKQRLTMVR*CRTNVW Trigger: CCACACGTTCGTCCGGCACAAACGTACCATGGTCAA...ACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGTGGATGGCGGTCCGTTaGTGCAGCAGCAAAGACTTG | + |
Preference number: 5 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLWMAVR*CSSKDL Trigger: CAAGTCTTTGCTGCTGCACAAACGGACCGCCATCCA...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 90 bp | GGACGAAGAGGTAGGCCGCCAGCGCTCTGGCATCCTTGGGGTGGGTaGAGAACTTGTCGTTGTTCTGACCTTCCTGGAGGTAGATTGCCG | + |
Preference number: 5 (lower is better) Translates to: GRRGRPPALWHPWGG*RTCRCSDLPGGRLP Trigger: CGGCAATCTACCTCCAGGAAGGTCAGAACAACGACAAGTTCTTCACCCACCCCAAGGATGCCAGAGCGCTGGCGGCCTACCTCTTCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | TCAGGAAGACAGAGCGAGGTGGCTGGAACGGACCCTGGCTATAGTCTCTTTTCTCTGGGGACCTGGGAGTaGTGGATGCTGTGGCTGCCC | + |
Preference number: 5 (lower is better) Translates to: SGRQSEVAGTDPGYSLFSLGTWE*WMLWLP Trigger: GGGCAGCCACAGCATCCACAACTCCCAGGTCCCCAG...AGAAAAGAGACTATAGCCAGGGTCCGTTCCAGCCACCTCGCTCTGTCTTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GGGCCGGACACTGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGCAGCGTATGACATCTGGAAAGTaGGCTGTGGTCAGGAGAACG | + |
Preference number: 5 (lower is better) Translates to: GPDTVPTECPIPTREKQRMTSGK*AVVRRT Trigger: CGTTCTCCTGACCACAGCCAACTTTCCAGATGTCAT...ACGCTGCTTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACAGTGTCCGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | CGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAACTCTGGTTCAAGGCCTaGAAAGTCAGGAAGCGTTCC | + |
Preference number: 5 (lower is better) Translates to: REKQRGGSHRVPYPHSGELWFKA*KVRKRS Trigger: GGAACGCTTCCTGACTTTCAAGGCCTTGAACCAGAG...TTCTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCGGGGTCAGCCGCCCGTaGAAGAACTCCATGCCCACG | + |
Preference number: 5 (lower is better) Translates to: SSHSAEWREGASSLDRDPGVSRP*KNSMPT Trigger: CGTGGGCATGGAGTTCTTCAACGGGCGGCTGACCCC...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGAGACTCAGGTCACTTTaGGTTCTCGATCGCCGTCCC | + |
Preference number: 5 (lower is better) Translates to: AYSPGRHSLFPAWLASLRRLRSL*VLDRRP Trigger: GGGACGGCGATCGAGAACCAAAAGTGACCTGAGTCT...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 90 bp | CGCCGTCCCAGAAACACCATGGAATTTTGCTGGTATTTCTCCATCTaGGAGAGGGTGTCCAGCAGCCGGGTCACGTCAGAGGAGGTGCCT | + |
Preference number: 5 (lower is better) Translates to: RRPRNTMEFCWYFSI*ERVSSSRVTSEEVP Trigger: AGGCACCTCCTCTGACGTGACCCGGCTGCTGGACACCCTCTCTCAGATGGAGAAATACCAGCAAAATTCCATGGTGTTTCTGGGACGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | ATGAACTGCACCACGAGGACGGACGTCTTGACCATGGTACGTTTGTaGCGGACGAACGTGTGGAAGCCCAGCCACCGCAATTTCATGCAG | + |
Preference number: 5 (lower is better) Translates to: MNCTTRTDVLTMVRL*RTNVWKPSHRNFMQ Trigger: CTGCATGAAATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGTGCAGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | GGGTTCCATGTTGAGCGTCAGTGCGAGCAGTCCCAGGAAGGCGAATaGCGTGACCGAGAAATCGAACAGGTTCCATCCAGAGGACAGGTA | + |
Preference number: 5 (lower is better) Translates to: GFHVERQCEQSQEGE*RDREIEQVPSRGQV Trigger: TACCTGTCCTCTGGATGGAACCTGTTCGATTTCTCGGTCACGGCATTCGCCTTCCTGGGACTGCTCGCACTGACGCTCAACATGGAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCTGGCTGCCCCCATTTTaGCTGGGCAGCTGCTCTTGG | + |
Preference number: 5 (lower is better) Translates to: SSHSAEWREGASSLDRDPWLPPF*LGSCSW Trigger: CCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCA...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGGTAGATTGCCGCCTCTaGATAATTCATCTCCCAGTT | + |
Preference number: 5 (lower is better) Translates to: LGRSSVVVPTECPIPTREVDCRL*IIHLPV Trigger: AACTGGGAGATGAATTATCAAGAGGCGGCAATCTAC...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | CTCGGGAGAAGCAGCGTGGTGGTTCCCACAGAGTGCCCTATCCCCACTCGGGAGAAGGTCACGAAGCTGTaGAGGATGTTGTCAAAGTTG | + |
Preference number: 5 (lower is better) Translates to: LGRSSVVVPTECPIPTREKVTKL*RMLSKL Trigger: CAACTTTGACAACATCCTCAACAGCTTCGTGACCTT...CTCCCGAGTGGGGATAGGGCACTCTGTGGGAACCACCACGCTGCTTCTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTAGGATCCAGACACCGTaGACAGCCACCACCAAGTAC | + |
Preference number: 5 (lower is better) Translates to: RHSLFPAWLASLRVSLVCRIQTP*TATTKY Trigger: GTACTTGGTGGTGGCTGTCAACGGTGTCTGGATCCT...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 90 bp | AGCCCAGCCACCGCAATTTCATGCAGAGTTCAAATACCACCACCATaGGGGCAAAGAGTTCCAGCGTGGCGTGGACGTAAGTGTGCAGCT | + |
Preference number: 5 (lower is better) Translates to: SPATAISCRVQIPPP*GQRVPAWRGRKCAA Trigger: AGCTGCACACTTACGTCCACGCCACGCTGGAACTCTTTGCCCTCATGGTGGTGGTATTTGAACTCTGCATGAAATTGCGGTGGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 90 bp | AGGACGGACGTCTTGACCATGGTACGTTTGTGCCGGACGAACGTGTaGAAGCCCAGCCACCGCAATTTCATGCAGAGTTCAAATACCACC | + |
Preference number: 5 (lower is better) Translates to: RTDVLTMVRLCRTNV*KPSHRNFMQSSNTT Trigger: GGTGGTATTTGAACTCTGCATGAAATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GCTTACAGCCCTGGGCGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGTGCTTTTCAATGTCGTaGAAGGTGTCGAACACCACG | + |
Preference number: 5 (lower is better) Translates to: AYSPGRHSLFPAWLASLRCFSMS*KVSNTT Trigger: CGTGGTGTTCGACACCTTCAACGACATTGAAAAGCA...CCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCGCCCAGGGCTGTAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GTTTTCCATGGTAGGACGAGAGCTCCGCCAGGCCTGGGCCTCCAGCCTAAGCTGTGCAGCAGCAAAGACTaGAACTTGTGCTTTTCAATG | + |
Preference number: 5 (lower is better) Translates to: VFHGRTRAPPGLGLQPKLCSSKD*NLCFSM Trigger: CATTGAAAAGCACAAGTTCAAGTCTTTGCTGCTGCA...CAGCTTAGGCTGGAGGCCCAGGCCTGGCGGAGCTCTCGTCCTACCATGGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | ACGCAGGACCACAATGAAATAGAAGGGTTCCATGTTGAGCGTCAGTaGGAGCAGTCCCAGGAAGGCGAATGCCGTGACCGAGAAATCGAA | + |
Preference number: 5 (lower is better) Translates to: TQDHNEIEGFHVERQ*EQSQEGECRDREIE Trigger: TTCGATTTCTCGGTCACGGCATTCGCCTTCCTGGGACTGCTCGCACTGACGCTCAACATGGAACCCTTCTATTTCATTGTGGTCCTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GCCACTAGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGCTGTCTGTTTCTCTTaGCCTTCCACTGCAGAGCAG | + |
Preference number: 5 (lower is better) Translates to: ATSSHSAEWREGASSLDRAVCFS*PSTAEQ Trigger: CTGCTCTGCAGTGGAAGGCAAAGAGAAACAGACAGC...CCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACTAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | CGACACAGTCTGTTCCCTGCCTGGCTAGCAAGTTTGAGGGTCAGCTTGGTGTGTAGGATGTTAATCCCTTaGAAGATGAGGAAGGCTGTC | + |
Preference number: 5 (lower is better) Translates to: RHSLFPAWLASLRVSLVCRMLIP*KMRKAV Trigger: GACAGCCTTCCTCATCTTCAAAGGGATTAACATCCT...ACACACCAAGCTGACCCTCAAACTTGCTAGCCAGGCAGGGAACAGACTGTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | TGTGTGCTCAAAGGTGACTCTGTGGGGCTACAGTTTGGCCTGAGGGCCCTGTCTATGATGATGTACCAATaGTTGACAACGGTGAGCTCA | + |
Preference number: 5 (lower is better) Translates to: CVLKGDSVGLQFGLRALSMMMYQ*LTTVSS Trigger: TGAGCTCACCGTTGTCAACAATTGGTACATCATCAT...AGACAGGGCCCTCAGGCCAAACTGTAGCCCCACAGAGTCACCTTTGAGCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 90 bp | GGCTGTCCGGGGGAGCTCATCAAACCAATGCTGTCTGTTTCTCTTTaGCTTCCACTGCAGAGCAGCGACTTCGTAAATATCATAGAAGTC | + |
Preference number: 5 (lower is better) Translates to: GCPGELIKPMLSVSL*LPLQSSDFVNIIEV Trigger: GACTTCTATGATATTTACGAAGTCGCTGCTCTGCAGTGGAAGGCAAAGAGAAACAGACAGCATTGGTTTGATGAGCTCCCCCGGACAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 90 bp | GACTCAGGTCACTTTTGGTTCTCGATCGCCGTCCCAGAAACACCATaGAATTTTGCTGGTATTTCTCCATCTGAGAGAGGGTGTCCAGCA | + |
Preference number: 5 (lower is better) Translates to: DSGHFWFSIAVPETP*NFAGISPSERGCPA Trigger: TGCTGGACACCCTCTCTCAGATGGAGAAATACCAGCAAAATTCCATGGTGTTTCTGGGACGGCGATCGAGAACCAAAAGTGACCTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGTCAGGAAGCGTTCCCTaGCACTCATCCGGGGCTTGT | + |
Preference number: 5 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLSGSVP*HSSGAC Trigger: ACAAGCCCCGGATGAGTGCAAGGGAACGCTTCCTGA...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GTGGCTCTTAACCCATACAAAATGATTGTCTGCACGGTGTGGAGTAAGGCTGGGCTTCCTGGAGGTAGATaGCCGCCTCTTGATAATTCA | + |
Preference number: 5 (lower is better) Translates to: VALNPYKMIVCTVWSKAGLPGGR*PPLDNS Trigger: TGAATTATCAAGAGGCGGCAATCTACCTCCAGGAAG...CCCAGCCTTACTCCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGAGGAGAACGAACAGGTaGACGATGCTGTTCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLRRTNR*TMLFSR Trigger: CCTGGAGAACAGCATCGTCAACCTGTTCGTTCTCCT...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | AGTTCTCACTCTGCTGAATGGAGGGAAGGGGCATCTAGCTTAGACAGGGATCCCAAACACCATGGAATTTaGCTGGTATTTCTCCATCTG | + |
Preference number: 5 (lower is better) Translates to: SSHSAEWREGASSLDRDPKHHGI*LVFLHL Trigger: CAGATGGAGAAATACCAGCAAAATTCCATGGTGTTT...GGGATCCCTGTCTAAGCTAGATGCCCCTTCCCTCCATTCAGCAGAGTGAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS-3UTR CAA 90 bp | GAGAGTAAGCTCTTCTGTCTCCCTCAAGGGAACCTTCTAACACTTTTGTCATTGATGATGTACCAATTGTaGACAACGGTGAGCTCAAAC | + |
Preference number: 5 (lower is better) Translates to: ESKLFCLPQGNLLTLLSLMMYQL*TTVSSN Trigger: GTTTGAGCTCACCGTTGTCAACAATTGGTACATCAT...CAATGACAAAAGTGTTAGAAGGTTCCCTTGAGGGAGACAGAAGAGCTTACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | CTGGGAGCGCTGGCGACTGCCAGGGGGCTGCTGGGCTaGAGGGCCGGGCACGCTGCCCCTGAGCTTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: LGALATARGLLG*RAGHAAPELLL Trigger: CAGCAGAAGCTCAGGGGCAGCGTGCCCGGCCCTGCAGCCCAGCAGCCCCCTGGCAGTCGCCAGCGCTCCCAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | GCTGCAGGGCCGGGCACGCTGCCCCTGAGCTTCTGCTaGTCCTGTTCCCGGGCATGCTCCTCGTACCACTCC | + |
Preference number: 6 (lower is better) Translates to: AAGPGTLPLSFC*SCSRACSSYHS Trigger: GGAGTGGTACGAGGAGCATGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGGCAGCGTGCCCGGCCCTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | TGGGCTGCAGGGCCGGGCACGCTGCCCCTGAGCTTCTaGTGCTCCTGTTCCCGGGCATGCTCCTCGTACCAC | + |
Preference number: 6 (lower is better) Translates to: WAAGPGTLPLSF*CSCSRACSSYH Trigger: GTGGTACGAGGAGCATGCCCGGGAACAGGAGCAGCAGAAGCTCAGGGGCAGCGTGCCCGGCCCTGCAGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | CAGCGTAGTGCCCGGGTCACCCGCACGTGGGACGTCTaGCGAACCAGCACCACAATGGCCTCGATGAACTGC | + |
Preference number: 6 (lower is better) Translates to: QRSARVTRTWDV*RTSTTMASMNC Trigger: GCAGTTCATCGAGGCCATTGTGGTGCTGGTTCGGCAGACGTCCCACGTGCGGGTGACCCGGGCACTACGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | GTACACCGCCACAGTAGCGACAGTCCACCAGGAAAATaGAGCGTAGTGCCCGGGTCACCCGCACGTGGGACG | + |
Preference number: 6 (lower is better) Translates to: VHRHSSDSPPGK*SVVPGSPARGT Trigger: CGTCCCACGTGCGGGTGACCCGGGCACTACGCTGCATTTTCCTGGTGGACTGTCGCTACTGTGGCGGTGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | AGAGGGTGTCCAGCAGCCGGGTCACGTCAGAGGAGGTaGCTCGCTCCTCACGATAAAGCTCCAGGACGGCCA | + |
Preference number: 6 (lower is better) Translates to: RGCPAAGSRQRR*LAPHDKAPGRP Trigger: TGGCCGTCCTGGAGCTTTATCGTGAGGAGCGAGGCACCTCCTCTGACGTGACCCGGCTGCTGGACACCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | AGGAAAATGCAGCGTAGTGCCCGGGTCACCCGCACGTaGGACGTCTGCCGAACCAGCACCACAATGGCCTCG | + |
Preference number: 6 (lower is better) Translates to: RKMQRSARVTRT*DVCRTSTTMAS Trigger: CGAGGCCATTGTGGTGCTGGTTCGGCAGACGTCCCACGTGCGGGTGACCCGGGCACTACGCTGCATTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | GCTGTGGCTGCCCCCATTTTTGCTGGGCAGCTGCTCTaGGCCCAGGCTGTTCGAAGGAGGCAGCGGAGCACT | + |
Preference number: 6 (lower is better) Translates to: AVAAPIFAGQLL*AQAVRRRQRST Trigger: AGTGCTCCGCTGCCTCCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 90 bp | GTTGTGGATGCTGTGGCTGCCCCCATTTTTGCTGGGCAGCTGCTCTaGGCCCAGGCTGTTCGAAGGAGGCAGCGGAGCACTCTCAGCCTC | + |
Preference number: 6 (lower is better) Translates to: VVDAVAAPIFAGQLL*AQAVRRRQRSTLSL Trigger: GAGGCTGAGAGTGCTCCGCTGCCTCCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGCATCCACAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | TGGATGCTGTGGCTGCCCCCATTTTTGCTGGGCAGCTaGTCTTGGCCCAGGCTGTTCGAAGGAGGCAGCGGA | + |
Preference number: 6 (lower is better) Translates to: WMLWLPPFLLGS*SWPRLFEGGSG Trigger: TCCGCTGCCTCCTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGCATCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | TGCACCACGAGGACGGACGTCTTGACCATGGTACGTTaGTGCCGGACGAACGTGTGGAAGCCCAGCCACCGC | + |
Preference number: 6 (lower is better) Translates to: CTTRTDVLTMVR*CRTNVWKPSHR Trigger: GCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | CCTGGGAGTTGTGGATGCTGTGGCTGCCCCCATTTTTaGTGGGCAGCTGCTCTTGGCCCAGGCTGTTCGAAG | + |
Preference number: 6 (lower is better) Translates to: PGSCGCCGCPHF*WAAALGPGCSK Trigger: CTTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGCATCCACAACTCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | AGAAGCGCATTAAGCCTTCGAACTGCCTGTAGGAGATaGCAGCCGGCCTCCGTTGGCTGGCAAGCAGGCCGT | + |
Preference number: 6 (lower is better) Translates to: RSALSLRTACRR*QPASVGWQAGR Trigger: ACGGCCTGCTTGCCAGCCAACGGAGGCCGGCTGGCATCTCCTACAGGCAGTTCGAAGGCTTAATGCGCTTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | GGTAGGCCGCCAGCGCTCTGGCATCCTTGGGGTGGGTaGAGAACTTGTCGTTGTTCTGACCTTCCTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: GRPPALWHPWGG*RTCRCSDLPGG Trigger: ACCTCCAGGAAGGTCAGAACAACGACAAGTTCTTCACCCACCCCAAGGATGCCAGAGCGCTGGCGGCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | ACCACGAGGACGGACGTCTTGACCATGGTACGTTTGTaGCGGACGAACGTGTGGAAGCCCAGCCACCGCAAT | + |
Preference number: 6 (lower is better) Translates to: TTRTDVLTMVRL*RTNVWKPSHRN Trigger: ATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | AGCAACAGGAGGATGTCCATGAAGGGTGGGAGAGACTaGAAGATCTGCCGCAGGTTGCGCCGTACACCGCCA | + |
Preference number: 6 (lower is better) Translates to: SNRRMSMKGGRD*KICRRLRRTPP Trigger: TGGCGGTGTACGGCGCAACCTGCGGCAGATCTTCCAGTCTCTCCCACCCTTCATGGACATCCTCCTGTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | ACCTGGGAGTTGTGGATGCTGTGGCTGCCCCCATTTTaGCTGGGCAGCTGCTCTTGGCCCAGGCTGTTCGAA | + |
Preference number: 6 (lower is better) Translates to: TWELWMLWLPPF*LGSCSWPRLFE Trigger: TTCGAACAGCCTGGGCCAAGAGCAGCTGCCCAGCAAAAATGGGGGCAGCCACAGCATCCACAACTCCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 90 bp | AGCACCACAATGGCCTCGATGAACTGCACCACGAGGACGGACGTCTaGACCATGGTACGTTTGTGCCGGACGAACGTGTGGAAGCCCAGC | + |
Preference number: 6 (lower is better) Translates to: STTMASMNCTTRTDV*TMVRLCRTNVWKPS Trigger: GCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGTGCAGTTCATCGAGGCCATTGTGGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | CGCAGGACCAGGGGTTCCGGGAGTAGGAGGGCATCATaGCATCTGGAAAGTTGGCTGTGGTCAGGAGAACGA | + |
Preference number: 6 (lower is better) Translates to: RRTRGSGSRRAS*HLESWLWSGER Trigger: TCGTTCTCCTGACCACAGCCAACTTTCCAGATGTCATGATGCCCTCCTACTCCCGGAACCCCTGGTCCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | GCGTCAGTGCGAGCAGTCCCAGGAAGGCGAATGCCGTaGCCGAGAAATCGAACAGGTTCCATCCAGAGGACA | + |
Preference number: 6 (lower is better) Translates to: ASVRAVPGRRMP*PRNRTGSIQRT Trigger: TGTCCTCTGGATGGAACCTGTTCGATTTCTCGGTCACGGCATTCGCCTTCCTGGGACTGCTCGCACTGACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | TGCTGGTGTTGCAGCAGTTGGGGGTCAGCCGCCCGTTaGAGAACTCCATGCCCACGATGGCGAAGGAATAGT | + |
Preference number: 6 (lower is better) Translates to: CWCCSSWGSAAR*RTPCPRWRRNS Trigger: ACTATTCCTTCGCCATCGTGGGCATGGAGTTCTTCAACGGGCGGCTGACCCCCAACTGCTGCAACACCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | GGCCAAGGCTGGCCATCCGCGGCAGCAGCTCAAACATaGTGTCCAACACGTTGCGGTAGCGTTTCTTCAGTT | + |
Preference number: 6 (lower is better) Translates to: GQGWPSAAAAQT*CPTRCGSVSSV Trigger: AACTGAAGAAACGCTACCGCAACGTGTTGGACACCATGTTTGAGCTGCTGCCGCGGATGGCCAGCCTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | ATGGCCTCGATGAACTGCACCACGAGGACGGACGTCTaGACCATGGTACGTTTGTGCCGGACGAACGTGTGG | + |
Preference number: 6 (lower is better) Translates to: MASMNCTTRTDV*TMVRLCRTNVW Trigger: CCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGTGCAGTTCATCGAGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 90 bp | TCGATGAACTGCACCACGAGGACGGACGTCTTGACCATGGTACGTTaGTGCCGGACGAACGTGTGGAAGCCCAGCCACCGCAATTTCATG | + |
Preference number: 6 (lower is better) Translates to: SMNCTTRTDVLTMVR*CRTNVWKPSHRNFM Trigger: CATGAAATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGACGTCCGTCCTCGTGGTGCAGTTCATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | GTTGAGCGTCAGTGCGAGCAGTCCCAGGAAGGCGAATaGCGTGACCGAGAAATCGAACAGGTTCCATCCAGA | + |
Preference number: 6 (lower is better) Translates to: VERQCEQSQEGE*RDREIEQVPSR Trigger: TCTGGATGGAACCTGTTCGATTTCTCGGTCACGGCATTCGCCTTCCTGGGACTGCTCGCACTGACGCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | CCAGGGGTTCCGGGAGTAGGAGGGCATCATGACATCTaGAAAGTTGGCTGTGGTCAGGAGAACGAACAGGTT | + |
Preference number: 6 (lower is better) Translates to: PGVPGVGGHHDI*KVGCGQENEQV Trigger: AACCTGTTCGTTCTCCTGACCACAGCCAACTTTCCAGATGTCATGATGCCCTCCTACTCCCGGAACCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | TGGTCATCACCACCATGGTCACTATGTAAAAGGTCATaGAGTACAGGCGGCTCCAGTGGGACGTCTGCGAGG | + |
Preference number: 6 (lower is better) Translates to: WSSPPWSLCKRS*STGGSSGTSAR Trigger: CCTCGCAGACGTCCCACTGGAGCCGCCTGTACTTCATGACCTTTTACATAGTGACCATGGTGGTGATGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | CACAATGAAATAGAAGGGTTCCATGTTGAGCGTCAGTaGGAGCAGTCCCAGGAAGGCGAATGCCGTGACCGA | + |
Preference number: 6 (lower is better) Translates to: HNEIEGFHVERQ*EQSQEGECRDR Trigger: TCGGTCACGGCATTCGCCTTCCTGGGACTGCTCGCACTGACGCTCAACATGGAACCCTTCTATTTCATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | AAGGTCATGAAGTACAGGCGGCTCCAGTGGGACGTCTaGGAGGTGACGCCTTCCATGATGATGTACCAATTG | + |
Preference number: 6 (lower is better) Translates to: KVMKYRRLQWDV*EVTPSMMMYQL Trigger: CAATTGGTACATCATCATGGAAGGCGTCACCTCGCAGACGTCCCACTGGAGCCGCCTGTACTTCATGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | GTCTTGACCATGGTACGTTTGTGCCGGACGAACGTGTaGAAGCCCAGCCACCGCAATTTCATGCAGAGTTCA | + |
Preference number: 6 (lower is better) Translates to: VLTMVRLCRTNV*KPSHRNFMQSS Trigger: TGAACTCTGCATGAAATTGCGGTGGCTGGGCTTCCACACGTTCGTCCGGCACAAACGTACCATGGTCAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 90 bp | GCATGCTGGATGGCGGTCCGTTTGTGCAGCAGCAAAGACTTGAACTaGTGCTTTTCAATGTCGTTGAAGGTGTCGAACACCACGGCCAGG | + |
Preference number: 6 (lower is better) Translates to: ACWMAVRLCSSKDLN*CFSMSLKVSNTTAR Trigger: CCTGGCCGTGGTGTTCGACACCTTCAACGACATTGAAAAGCACAAGTTCAAGTCTTTGCTGCTGCACAAACGGACCGCCATCCAGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | ACCGCAATTTCATGCAGAGTTCAAATACCACCACCATaGGGGCAAAGAGTTCCAGCGTGGCGTGGACGTAAG | + |
Preference number: 6 (lower is better) Translates to: TAISCRVQIPPP*GQRVPAWRGRK Trigger: CTTACGTCCACGCCACGCTGGAACTCTTTGCCCTCATGGTGGTGGTATTTGAACTCTGCATGAAATTGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | GTTGTTCTGACCTTCCTGGAGGTAGATTGCCGCCTCTaGATAATTCATCTCCCAGTTGTGTCCGGTGGGACT | + |
Preference number: 6 (lower is better) Translates to: VVLTFLEVDCRL*IIHLPVVSGGT Trigger: AGTCCCACCGGACACAACTGGGAGATGAATTATCAAGAGGCGGCAATCTACCTCCAGGAAGGTCAGAACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | GGTTCTCGATCGCCGTCCCAGAAACACCATGGAATTTaGCTGGTATTTCTCCATCTGAGAGAGGGTGTCCAG | + |
Preference number: 6 (lower is better) Translates to: GSRSPSQKHHGI*LVFLHLREGVQ Trigger: CTGGACACCCTCTCTCAGATGGAGAAATACCAGCAAAATTCCATGGTGTTTCTGGGACGGCGATCGAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | TCTCCTCCTGGTACATCTTCAGACTCAGGTCACTTTTaGTTCTCGATCGCCGTCCCAGAAACACCATGGAAT | + |
Preference number: 6 (lower is better) Translates to: SPPGTSSDSGHF*FSIAVPETPWN Trigger: ATTCCATGGTGTTTCTGGGACGGCGATCGAGAACCAAAAGTGACCTGAGTCTGAAGATGTACCAGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | TGCTGGATGGCGGTCCGTTTGTGCAGCAGCAAAGACTaGAACTTGTGCTTTTCAATGTCGTTGAAGGTGTCG | + |
Preference number: 6 (lower is better) Translates to: CWMAVRLCSSKD*NLCFSMSLKVS Trigger: CGACACCTTCAACGACATTGAAAAGCACAAGTTCAAGTCTTTGCTGCTGCACAAACGGACCGCCATCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | TGCGAGGTGACGCCTTCCATGATGATGTACCAATTGTaGACAACGGTGAGCTCAAACAAGGTCACGAAGCTG | + |
Preference number: 6 (lower is better) Translates to: CEVTPSMMMYQL*TTVSSNKVTKL Trigger: CAGCTTCGTGACCTTGTTTGAGCTCACCGTTGTCAACAATTGGTACATCATCATGGAAGGCGTCACCTCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | GTCTGCGAGGTGACGCCTTCCATGATGATGTACCAATaGTTGACAACGGTGAGCTCAAACAAGGTCACGAAG | + |
Preference number: 6 (lower is better) Translates to: VCEVTPSMMMYQ*LTTVSSNKVTK Trigger: CTTCGTGACCTTGTTTGAGCTCACCGTTGTCAACAATTGGTACATCATCATGGAAGGCGTCACCTCGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | ATCTCCTCCTGGTACATCTTCAGACTCAGGTCACTTTaGGTTCTCGATCGCCGTCCCAGAAACACCATGGAA | + |
Preference number: 6 (lower is better) Translates to: ISSWYIFRLRSL*VLDRRPRNTME Trigger: TTCCATGGTGTTTCTGGGACGGCGATCGAGAACCAAAAGTGACCTGAGTCTGAAGATGTACCAGGAGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS GCA 72 bp | GGGGAGCTCATCAAACCAATGCTGTCTGTTTCTCTTTaGCTTCCACTGCAGAGCAGCGACTTCGTAAATATC | + |
Preference number: 6 (lower is better) Translates to: GELIKPMLSVSL*LPLQSSDFVNI Trigger: GATATTTACGAAGTCGCTGCTCTGCAGTGGAAGGCAAAGAGAAACAGACAGCATTGGTTTGATGAGCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CCA 72 bp | CACTTTTGGTTCTCGATCGCCGTCCCAGAAACACCATaGAATTTTGCTGGTATTTCTCCATCTGAGAGAGGG | + |
Preference number: 6 (lower is better) Translates to: HFWFSIAVPETP*NFAGISPSERG Trigger: CCCTCTCTCAGATGGAGAAATACCAGCAAAATTCCATGGTGTTTCTGGGACGGCGATCGAGAACCAAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS CAA 72 bp | ATGGCGGTCCGTTTGTGCAGCAGCAAAGACTTGAACTaGTGCTTTTCAATGTCGTTGAAGGTGTCGAACACC | + |
Preference number: 6 (lower is better) Translates to: MAVRLCSSKDLN*CFSMSLKVSNT Trigger: GGTGTTCGACACCTTCAACGACATTGAAAAGCACAAGTTCAAGTCTTTGCTGCTGCACAAACGGACCGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |
||
CDS TCA 72 bp | GGTAAGAAACACGAGGTAACTCCAGGGCACATGCTTTaGGGTGAAATTCCCACCTTTCAACATGAATGTCTC | + |
Preference number: 6 (lower is better) Translates to: GKKHEVTPGHML*GEIPTFQHECL Trigger: GAGACATTCATGTTGAAAGGTGGGAATTTCACCTCAAAGCATGTGCCCTGGAGTTACCTCGTGTTTCTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046426.10 |