Pregenerated sensors for TPBGL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096606Ensembl transcript IDs: ENSMUST00000178124.3
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTaGCTTAGGGTGAGAGGCAGGGAGGCAGTTCCCCCTCACTCACCA | + |
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Preference number: 1 (lower is better) Translates to: GRPSCAEAAQACHSA*LRVRGREAVPPHSP Trigger: TGGTGAGTGAGGGGGAACTGCCTCCCTGCCTCTCACCCTAAGTCAGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 90 bp | ACAGATGGGCAGCAGCTCCAAGCCTCACGTTTCCAGACAGACCAGTaGCCCTGGATTGGAGACCCTGCTCACCCCACCTGCTCCCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: TDGQQLQASRFQTDQ*PWIGDPAHPTCSLP Trigger: AGGAAGGGAGCAGGTGGGGTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGTCTGGAAACGTGAGGCTTGGAGCTGCTGCCCATCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 90 bp | CAGACAGACCAGTGGCCCTGGATTGGAGACCCTGCTCACCCCACCTaGTCCCTTCCTCCCTCAAGTCTGCCTATATGCTATGGGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: QTDQWPWIGDPAHPT*SLPPSSLPICYGGA Trigger: AGCACCCCCATAGCATATAGGCAGACTTGAGGGAGGAAGGGAGCAGGTGGGGTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 90 bp | AGCCTCACGTTTCCAGACAGACCAGTGGCCCTGGATTGGAGACCCTaGTCACCCCACCTGCTCCCTTCCTCCCTCAAGTCTGCCTATATG | + |
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Preference number: 1 (lower is better) Translates to: SLTFPDRPVALDWRP*SPHLLPSSLKSAYM Trigger: CATATAGGCAGACTTGAGGGAGGAAGGGAGCAGGTGGGGTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGTCTGGAAACGTGAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 90 bp | GCAGGGAGGCAGTTCCCCCTCACTCACCATTGTGCTTTGGGATCATaGAGAAGGCAGGGCACTGAGGCCATGACCTTGACCAGGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: AGRQFPLTHHCALGS*RRQGTEAMTLTRKA Trigger: AGCTTTCCTGGTCAAGGTCATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAGGGGGAACTGCCTCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 90 bp | CACCTGCTCCCTTCCTCCCTCAAGTCTGCCTATATGCTATGGGGGTaGTTTTACTTGTCCTGCAGGATGGGAGAACATCTCCTAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: HLLPSSLKSAYMLWG*FYLSCRMGEHLLGG Trigger: CCCTCCTAGGAGATGTTCTCCCATCCTGCAGGACAAGTAAAAGCACCCCCATAGCATATAGGCAGACTTGAGGGAGGAAGGGAGCAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 90 bp | CCTCACTCACCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTaGGGCCATGACCTTGACCAGGAAAGCTTTCCACTGAGACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: PHSPLCFGIMQKAGH*GHDLDQESFPLRLR Trigger: TCTCAGTCTCAGTGGAAAGCTTTCCTGGTCAAGGTCATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 90 bp | GGGCCAGGGCATGAAAGTGACTGGGGTGAAGAGCTGACTTTTAGATaGAGGACAAACTCTGTTGGGACATTAGAGCCGCAACAGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GPGHESDWGEELTFR*RTNSVGTLEPQQKG Trigger: GCCTTTCTGTTGCGGCTCTAATGTCCCAACAGAGTTTGTCCTCCATCTAAAAGTCAGCTCTTCACCCCAGTCACTTTCATGCCCTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 90 bp | AAGGGGACTGAGAGCCTAAGACTTGGGCCAGGGCATGAAAGTGACTaGGGTGAAGAGCTGACTTTTAGATGGAGGACAAACTCTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: KGTESLRLGPGHESD*GEELTFRWRTNSVG Trigger: CCCAACAGAGTTTGTCCTCCATCTAAAAGTCAGCTCTTCACCCCAGTCACTTTCATGCCCTGGCCCAAGTCTTAGGCTCTCAGTCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 90 bp | TCTTCTACCCTGGAGCAGGGGTCAGTGCAATCTAGCCAGGGTGTCTaGCTTAAAGCATATAGAAAGGTGGAGAAAGTGCTAGAGATTTCA | + |
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Preference number: 1 (lower is better) Translates to: SSTLEQGSVQSSQGV*LKAYRKVEKVLEIS Trigger: TGAAATCTCTAGCACTTTCTCCACCTTTCTATATGCTTTAAGCCAGACACCCTGGCTAGATTGCACTGACCCCTGCTCCAGGGTAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 90 bp | GAGCTAGAACCAGGGTATGAAGCAAATCAGATTAGAGGAGACCACTaGAAGCCTTCAGATTTGGGTTACATGATGGAGAGCCCAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ELEPGYEANQIRGDH*KPSDLGYMMESPEF Trigger: GAACTCTGGGCTCTCCATCATGTAACCCAAATCTGAAGGCTTTCAGTGGTCTCCTCTAATCTGATTTGCTTCATACCCTGGTTCTAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 90 bp | ATCAGATTAGAGGAGACCACTGAAAGCCTTCAGATTTGGGTTACATaGTGGAGAGCCCAGAGTTCTGAGGTGGGACAAAAAGCTCAAACT | + |
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Preference number: 1 (lower is better) Translates to: IRLEETTESLQIWVT*WRAQSSEVGQKAQT Trigger: AGTTTGAGCTTTTTGTCCCACCTCAGAACTCTGGGCTCTCCATCATGTAACCCAAATCTGAAGGCTTTCAGTGGTCTCCTCTAATCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 90 bp | GCCTTCAGATTTGGGTTACATGATGGAGAGCCCAGAGTTCTGAGGTaGGACAAAAAGCTCAAACTTCATAAAAACCTTCCAAAGAGACCA | + |
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Preference number: 1 (lower is better) Translates to: AFRFGLHDGEPRVLR*DKKLKLHKNLPKRP Trigger: TGGTCTCTTTGGAAGGTTTTTATGAAGTTTGAGCTTTTTGTCCCACCTCAGAACTCTGGGCTCTCCATCATGTAACCCAAATCTGAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 90 bp | GAGAAAGTGCTAGAGATTTCAAAATGGAAGAGCAGGATCTTTGGGTaGGCCTGGACAGGGAGAAGGAATTTCAATTTCAATGGTCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: EKVLEISKWKSRIFG*AWTGRRNFNFNGPV Trigger: TACTGGACCATTGAAATTGAAATTCCTTCTCCCTGTCCAGGCTCACCCAAAGATCCTGCTCTTCCATTTTGAAATCTCTAGCACTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR TCA 90 bp | GCCGATATACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATCCTTGCCCCTGGCATaGAAGAGACAAGGCCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: ADIQRRKTFLCRGSTGLPSLPLA*KRQGRS Trigger: GCTCCGGCCTTGTCTCTTTCATGCCAGGGGCAAGGA...TGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR TCA 90 bp | GCCGATATACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCACAGAAGGCAGGGCACTaGGGCCATGACCTTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: ADIQRRKTFLCRGSTGLPQKAGH*GHDLDQ Trigger: CTGGTCAAGGTCATGGCCTCAGTGCCCTGCCTTCTG...TGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTAGCAGGATCTTTGGGTaGGCCTGGACAGGGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TEEEDLPVQRQHRPAILPSRIFG*AWTGRR Trigger: CCTTCTCCCTGTCCAGGCTCACCCAAAGATCCTGCT...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACCGTGTGGATGGTACAGACCAGTGGCCCTaGATTGGAGACCCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EGMRGGSKEFPGEDRVDGTDQWP*IGDPAH Trigger: GTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGT...ACCATCCACACGGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTAGCACAGAGCACAGATaGGCAGCAGCTCCAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TEEEDLPVQRQHRPAILPSTEHR*AAAPSL Trigger: GAGGCTTGGAGCTGCTGCCCATCTGTGCTCTGTGCT...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTTTCCAGACAGACCAGTaGCCCTGGATTGGAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: TEEEDLPVQRQHRPAILPFQTDQ*PWIGDP Trigger: AGGGTCTCCAATCCAGGGCCACTGGTCTGTCTGGAA...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTCTCACCATTGTGCTTTaGGATCATGCAGAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TEEEDLPVQRQHRPAILPLTIVL*DHAEGR Trigger: CCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAG...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR GCA 90 bp | GCCGATATACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATGCTTTTACTTGTCCTaGAGGATGGGAGAACATCTC | + |
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Preference number: 2 (lower is better) Translates to: ADIQRRKTFLCRGSTGLPCFYLS*RMGEHL Trigger: GAGATGTTCTCCCATCCTGCAGGACAAGTAAAAGCA...TGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCACCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTGAGGCCATGGCCCTCTCTGGCCCCTaGTCAATGAATGGTAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LTHHCALGSCRRQGTEAMALSGP*SMNGKS Trigger: ACTTTTACCATTCATTGACCAGGGGCCAGAGAGGGC...CATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CAA 90 bp | GCAGACTTTATAGAAAACAGCCCAAGGGAGGTCCAGATTTCTCAGTaGAGGATGGGGACAGCGGGCCTCAAGCCGATATACAGAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: ADFIENSPREVQISQ*RMGTAGLKPIYRGG Trigger: TCCTCCTCTGTATATCGGCTTGAGGCCCGCTGTCCCCATCCTCAACTGAGAAATCTGGACCTCCCTTGGGCTGTTTTCTATAAAGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTGAATTTCAATTTCAATaGTCCAGTAAGGACCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TEEEDLPVQRQHRPAILPEFQFQ*SSKDRQ Trigger: CTGCCGGTCCTTACTGGACCATTGAAATTGAAATTC...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACCGTGTGGATGGTCTAGAGATTTCAAAATaGAAGAGCAGGATCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGMRGGSKEFPGEDRVDGLEISK*KSRIFG Trigger: CCCAAAGATCCTGCTCTTCCATTTTGAAATCTCTAG...ACCATCCACACGGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCACCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTGAGGCCATGTCTGCCTATATGCTATaGGGGTGCTTTTACTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LTHHCALGSCRRQGTEAMSAYML*GCFYLS Trigger: GGACAAGTAAAAGCACCCCCATAGCATATAGGCAGA...CATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCACCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTGAGGCCATGGGAAAGAGTACACCTTaGAATTTCTGTATGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTHHCALGSCRRQGTEAMGKSTP*NFCMGE Trigger: CTCTCCCATACAGAAATTCCAAGGTGTACTCTTTCC...CATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CAA 90 bp | TGGGTTTTTGATCTGGAAACTCTAAGGCCAGGGAAAGAGTACACCTaGGAATTTCTGTATGGGAGAGATACTACGATTGATCCAAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WVFDLETLRPGKEYT*EFLYGRDTTIDPKV Trigger: GACCTTTGGATCAATCGTAGTATCTCTCCCATACAGAAATTCCAAGGTGTACTCTTTCCCTGGCCTTAGAGTTTCCAGATCAAAAACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CAA 90 bp | AGGAATTTCAATTTCAATGGTCCAGTAAGGACCGGCAGGCAGGATTaGTTTCTGAAAACAGATTTCTGGGTTTTTGATCTGGAAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: RNFNFNGPVRTGRQD*FLKTDFWVFDLETL Trigger: TAGAGTTTCCAGATCAAAAACCCAGAAATCTGTTTTCAGAAACAAATCCTGCCTGCCGGTCCTTACTGGACCATTGAAATTGAAATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | CAGCAGCTCCAAGCCTCACGTTTCCAGACAGACCAGTaGCCCTGGATTGGAGACCCTGCTCACCCCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: QQLQASRFQTDQ*PWIGDPAHPTC Trigger: GCAGGTGGGGTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGTCTGGAAACGTGAGGCTTGGAGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | TCCTGCAGGATGGGAGAACATCTCCTAGGAGGGCAGTaGGTAGCACCCCACCATGGGGGAAGAGCCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SCRMGEHLLGGQ*VAPHHGGRALS Trigger: AGAGAGGGCTCTTCCCCCATGGTGGGGTGCTACCCACTGCCCTCCTAGGAGATGTTCTCCCATCCTGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | CTCCAAGCCTCACGTTTCCAGACAGACCAGTGGCCCTaGATTGGAGACCCTGCTCACCCCACCTGCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LQASRFQTDQWP*IGDPAHPTCSL Trigger: AAGGGAGCAGGTGGGGTGAGCAGGGTCTCCAATCCAGGGCCACTGGTCTGTCTGGAAACGTGAGGCTTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 72 bp | GACAAGAGGTCAGACTCCATCCCCTTCCAGAAGGCATaGGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACC | + |
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Preference number: 3 (lower is better) Translates to: DKRSDSIPFQKA*EVVARSSQGRT Trigger: GGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTCTGGAAGGGGATGGAGTCTGACCTCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CAA 90 bp | GCCGATATACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCAACTGAGGCCATGACCTaGACCAGGAAAGCTTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: ADIQRRKTFLCRGSTGLPTEAMT*TRKAFH Trigger: GTGGAAAGCTTTCCTGGTCAAGGTCATGGCCTCAGT...TGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 72 bp | CAGTTCCCCCTCACTCACCATTGTGCTTTGGGATCATaGAGAAGGCAGGGCACTGAGGCCATGACCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: QFPLTHHCALGS*RRQGTEAMTLT Trigger: GGTCAAGGTCATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAGGGGGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 72 bp | CCTCAAGCCGATATACAGAGGAGGAAGACCTTCCTGTaGAGAGGCAGCACAGGCCTGCCATTCTGCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: PQADIQRRKTFL*RGSTGLPFCLT Trigger: AGTCAGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGCTTGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR GCA 72 bp | TGTTATCTCCGGGGCCCAGGCCAGGCAGAGAAAGGCTaGATGGCCCAAGTAAAGTCATCAGCTGATAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: CYLRGPGQAEKG*MAQVKSSADRN Trigger: GTTCCTATCAGCTGATGACTTTACTTGGGCCATGCAGCCTTTCTCTGCCTGGCCTGGGCCCCGGAGATAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 72 bp | CCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTaGGGCCATGACCTTGACCAGGAAAGCTTTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: PLCFGIMQKAGH*GHDLDQESFPL Trigger: CAGTGGAAAGCTTTCCTGGTCAAGGTCATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACCGTGTGGATGGTGGGAAAGAGTACACCTaGGAATTTCTGTATGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: EGMRGGSKEFPGEDRVDGGKEYT*EFLYGR Trigger: TCTCCCATACAGAAATTCCAAGGTGTACTCTTTCCC...ACCATCCACACGGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | CTGCTCCCTTCCTCCCTCAAGTCTGCCTATATGCTATaGGGGTGCTTTTACTTGTCCTGCAGGATGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLPSSLKSAYML*GCFYLSCRMGE Trigger: TTCTCCCATCCTGCAGGACAAGTAAAAGCACCCCCATAGCATATAGGCAGACTTGAGGGAGGAAGGGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | GAGAGCCTAAGACTTGGGCCAGGGCATGAAAGTGACTaGGGTGAAGAGCTGACTTTTAGATGGAGGACAAAC | + |
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Preference number: 3 (lower is better) Translates to: ESLRLGPGHESD*GEELTFRWRTN Trigger: GTTTGTCCTCCATCTAAAAGTCAGCTCTTCACCCCAGTCACTTTCATGCCCTGGCCCAAGTCTTAGGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | CTGGAGCAGGGGTCAGTGCAATCTAGCCAGGGTGTCTaGCTTAAAGCATATAGAAAGGTGGAGAAAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: LEQGSVQSSQGV*LKAYRKVEKVL Trigger: TAGCACTTTCTCCACCTTTCTATATGCTTTAAGCCAGACACCCTGGCTAGATTGCACTGACCCCTGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 72 bp | GAGGAGACCACTGAAAGCCTTCAGATTTGGGTTACATaGTGGAGAGCCCAGAGTTCTGAGGTGGGACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: EETTESLQIWVT*WRAQSSEVGQK Trigger: TTTTTGTCCCACCTCAGAACTCTGGGCTCTCCATCATGTAACCCAAATCTGAAGGCTTTCAGTGGTCTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | GTGAGCCTGGACAGGGAGAAGGAATTTCAATTTCAATaGTCCAGTAAGGACCGGCAGGCAGGATTTGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VSLDREKEFQFQ*SSKDRQAGFVS Trigger: AGAAACAAATCCTGCCTGCCGGTCCTTACTGGACCATTGAAATTGAAATTCCTTCTCCCTGTCCAGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | CATGAAAGTGACTGGGGTGAAGAGCTGACTTTTAGATaGAGGACAAACTCTGTTGGGACATTAGAGCCGCAA | + |
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Preference number: 3 (lower is better) Translates to: HESDWGEELTFR*RTNSVGTLEPQ Trigger: TTGCGGCTCTAATGTCCCAACAGAGTTTGTCCTCCATCTAAAAGTCAGCTCTTCACCCCAGTCACTTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR CCA 72 bp | AGTGCTAGAGATTTCAAAATGGAAGAGCAGGATCTTTaGGTGAGCCTGGACAGGGAGAAGGAATTTCAATTT | + |
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Preference number: 3 (lower is better) Translates to: SARDFKMEEQDL*VSLDREKEFQF Trigger: AAATTGAAATTCCTTCTCCCTGTCCAGGCTCACCCAAAGATCCTGCTCTTCCATTTTGAAATCTCTAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| 3UTR TCA 72 bp | CTAGAGATTTCAAAATGGAAGAGCAGGATCTTTGGGTaGGCCTGGACAGGGAGAAGGAATTTCAATTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LEISKWKSRIFG*AWTGRRNFNFN Trigger: ATTGAAATTGAAATTCCTTCTCCCTGTCCAGGCTCACCCAAAGATCCTGCTCTTCCATTTTGAAATCTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| CDS-3UTR CCA 90 bp | AGACTCCATCCCCTTCCAGAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGCCGAGCCTGGAGAAGTaGCCCGGGAGCCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHPLPEGMRGGSKEFPGPSLEK*PGSRQG Trigger: CCCCTGCCGGCTCCCGGGCCACTTCTCCAGGCTCGG...CCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTCTGGAAGGGGATGGAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR TCA 90 bp | GATGGTGAAGCACAGAGCACAGATGGGCAGCAGCTCCAAGCCTCACGTTTCCAGGGCCGGCCAGCGCGTTaGCACGCGCATCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGEAQSTDGQQLQASRFQGRPAR*HAHPAA Trigger: AGCAGCTGGATGCGCGTGTCAACGCGCTGGCCGGCC...CTGGAAACGTGAGGCTTGGAGCTGCTGCCCATCTGTGCTCTGTGCTTCACCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACCGTGTGGATGGTCAAGAGCAGCAGCCCTaGCAGCGGGCTCCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGMRGGSKEFPGEDRVDGQEQQP*QRAPEP Trigger: GGGCTCTGGAGCCCGCTGCCAGGGCTGCTGCTCTTG...ACCATCCACACGGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | CTCACTCACCATTGTGCTTTGGGATCATGCAGAAGGCAGGGCACTGAGGCCATGCGCTCGGTGGCGTTGTaGAGCCAGGCCAGCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTHHCALGSCRRQGTEAMRSVAL*SQASRG Trigger: CCCCCTGCTGGCCTGGCTGCACAACGCCACCGAGCG...CATGGCCTCAGTGCCCTGCCTTCTGCATGATCCCAAAGCACAATGGTGAGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCCAAACTCGTAAGTGTGTTATCTCCGGGGCCCAGGCCAGGCAGAGAACGAGTGCCGCCAGGCTaGGCAACCCGTCGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRSKLVSVLSPGPRPGRERVPPG*ATRRRH Trigger: GTGCCTTCGACGGGTTGCCCAGCCTGGCGGCACTCG...TTCTCTGCCTGGCCTGGGCCCCGGAGATAACACACTTACGAGTTTGGATCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGATTTCAAAATGGAAGAGCAGGATCTTTGGGTGAGCCTGGACAGGGAGGCGCAGCGCGGCGAGTaGCAGGCGGCTCAGCGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARDFKMEEQDLWVSLDREAQRGE*QAAQRV Trigger: AACGCGCTGAGCCGCCTGCCACTCGCCGCGCTGCGC...CTCCCTGTCCAGGCTCACCCAAAGATCCTGCTCTTCCATTTTGAAATCTCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGTGCCAGCGATGGATGTCAAGGGGACTGAGAGCCTAAGACTTGGGCCACGGGTACGCGCTCGGTaGCGTTGTGCAGCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKVPAMDVKGTESLRLGPRVRAR*RCAARP Trigger: TGGCCTGGCTGCACAACGCCACCGAGCGCGTACCCG...TGGCCCAAGTCTTAGGCTCTCAGTCCCCTTGACATCCATCGCTGGCACTTTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | GCCGATATACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTGTGCATCCAGCGTTaGATGCCGCGGCGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADIQRRKTFLCRGSTGLPLCIQR*MPRRFR Trigger: CCTAAACCGCCGCGGCATCCAACGCTGGATGCACAA...TGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGTATATCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGAATGGAAGGGCCTGAGCTAGAACCAGGGTATGAAGCAAATCAGATTTGGCGCCCACGATGGTaGGGTTGCGCGCGTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQGMEGPELEPGYEANQIWRPRW*GCARRV Trigger: CACCCGACGCGCGCAACCTCACCATCGTGGGCGCCA...AATCTGATTTGCTTCATACCCTGGTTCTAGCTCAGGCCCTTCCATTCCTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGAATGGAAGGGCCTGAGCTAGAACCAGGGTATGAAGCAAATCAGATTGGCGGCTCAGCGCGTTaGCTACCAAGCCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQGMEGPELEPGYEANQIGGSAR*LPSPAG Trigger: GCCTGCTGGGCTTGGTAGGCAACGCGCTGAGCCGCC...AATCTGATTTGCTTCATACCCTGGTTCTAGCTCAGGCCCTTCCATTCCTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGATCCAAACTCGTAAGTGTGTTATCTCCGGGGCCCAGGCCAGGCAGAGAAGCATCCAGCGTTGGATaGCGCGGCGGTTTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRSKLVSVLSPGPRPGREASSVG*RGGLGR Trigger: TCTACCTAAACCGCCGCGGCATCCAACGCTGGATGC...TTCTCTGCCTGGCCTGGGCCCCGGAGATAACACACTTACGAGTTTGGATCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTCCTCCATCTGATCTCTaGAGGCCTCGCGCAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEEEDLPVQRQHRPAILPPPSDL*RPRANC Trigger: ACAATTTGCGCGAGGCCTGCAGAGATCAGATGGAGG...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAATTTCAATGGTCCAGTAAGGACCGGCAGGCAGGATTTGTTTCTGAAAACAGCAGCAGGCGCGGCTaGGGCAGGTCGCCATCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQFQWSSKDRQAGFVSENSSRRG*GRSPSR Trigger: GCGCGATGGCGACCTGCCCCAGCCGCGCCTGCTGCT...GTTTTCAGAAACAAATCCTGCCTGCCGGTCCTTACTGGACCATTGAAATTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAGGTGGGACAAAAAGCTCAAACTTCATAAAAACCTTCCAAAGAGACCAACACGCGCATCCAGCTaGTCCAGGCGGGGCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRWDKKLKLHKNLPKRPTRASS*SRRGRR Trigger: GCGCCTGCCCCGCCTGGAGCAGCTGGATGCGCGTGT...TGGTCTCTTTGGAAGGTTTTTATGAAGTTTGAGCTTTTTGTCCCACCTCAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CCA 90 bp | GATTTCTGGGTTTTTGATCTGGAAACTCTAAGGCCAGGGAAAGAGTACACCTTGTCAGAGACCCGAGCCTaGAGAAGTGGCCCGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFWVFDLETLRPGKEYTLSETRA*RSGPGA Trigger: GGCTCCCGGGCCACTTCTCCAGGCTCGGGTCTCTGA...CAAGGTGTACTCTTTCCCTGGCCTTAGAGTTTCCAGATCAAAAACCCAGAAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| 3UTR CAA 72 bp | ATAGAAAACAGCCCAAGGGAGGTCCAGATTTCTCAGTaGAGGATGGGGACAGCGGGCCTCAAGCCGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: IENSPREVQISQ*RMGTAGLKPIY Trigger: GTATATCGGCTTGAGGCCCGCTGTCCCCATCCTCAACTGAGAAATCTGGACCTCCCTTGGGCTGTTTTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAATTTCAATGGTCCAGTAAGGACCGGCAGGCAGGATTTGTTTCTGAAAACGATGAGGCCGATGAGTaGCAGCACCAGCCCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQFQWSSKDRQAGFVSENDEADE*QHQPEE Trigger: TTCTTCGGGCTGGTGCTGGCACTCATCGGCCTCATC...GTTTTCAGAAACAAATCCTGCCTGCCGGTCCTTACTGGACCATTGAAATTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| 3UTR CAA 72 bp | GATCTGGAAACTCTAAGGCCAGGGAAAGAGTACACCTaGGAATTTCTGTATGGGAGAGATACTACGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLETLRPGKEYT*EFLYGRDTTID Trigger: ATCAATCGTAGTATCTCTCCCATACAGAAATTCCAAGGTGTACTCTTTCCCTGGCCTTAGAGTTTCCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| 3UTR CAA 72 bp | ACACCTTGGAATTTCTGTATGGGAGAGATACTACGATaGATCCAAAGGTCTCAGAGATCCAAACTCGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPWNFCMGEILR*IQRSQRSKLVS Trigger: ACTTACGAGTTTGGATCTCTGAGACCTTTGGATCAATCGTAGTATCTCTCCCATACAGAAATTCCAAGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CCA 90 bp | GCGGGGAAGCGCAGCGCAGGCGGCGCGCGTCGGGTACGCGCTCGGTaGCGTTGTGCAGCCAGGCCAGCAGGGGGCGCGAGGTGCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGKRSAGGARRVRAR*RCAARPAGGARCTH Trigger: GTGGGTGCACCTCGCGCCCCCTGCTGGCCTGGCTGCACAACGCCACCGAGCGCGTACCCGACGCGCGCCGCCTGCGCTGCGCTTCCCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CCA 90 bp | CACGGTCAGGTTGGCGCCCACGATGGTGAGGTTGCGCGCGTCGGGTaGCACGTCCCGGGGCGGCTGCCGGAGCTCCGCGCCCGACGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HGQVGAHDGEVARVG*HVPGRLPELRARRA Trigger: TGCGCGTCGGGCGCGGAGCTCCGGCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAACCTGACCGTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS TCA 90 bp | CGAAGGCTGCGGCGCGCAGCACGGTCAGGTTGGCGCCCACGATGGTaGGGTTGCGCGCGTCGGGTGGCACGTCCCGGGGCGGCTGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRLRRAARSGWRPRW*GCARRVARPGAAAG Trigger: TCCGGCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAACCTGACCGTGCTGCGCGCCGCAGCCTTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 90 bp | GCGCAGCGCAGGCGGCGCGCGTCGGGTACGCGCTCGGTGGCGTTGTaGAGCCAGGCCAGCAGGGGGCGCGAGGTGCACCCACAGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQRRRRASGTRSVAL*SQASRGREVHPQLS Trigger: ACTGAGCTGTGGGTGCACCTCGCGCCCCCTGCTGGCCTGGCTGCACAACGCCACCGAGCGCGTACCCGACGCGCGCCGCCTGCGCTGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 90 bp | ACGATGGTGAGGTTGCGCGCGTCGGGTGGCACGTCCCGGGGCGGCTaGCGGAGCTCCGCGCCCGACGCGCAGCGCAACATTAACCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TMVRLRASGGTSRGG*RSSAPDAQRNINRG Trigger: CCCCCGGTTAATGTTGCGCTGCGCGTCGGGCGCGGAGCTCCGGCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 90 bp | GCCGGAGCTCCGCGCCCGACGCGCAGCGCAACATTAACCGGGGGCTaGCGAAGCAGTAACACTGGAAGGGACAGGGCGCGGCGGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGAPRPTRSATLTGG*RSSNTGRDRARRAG Trigger: GCCGGCCCGCCGCGCCCTGTCCCTTCCAGTGTTACTGCTTCGGCAGCCCCCGGTTAATGTTGCGCTGCGCGTCGGGCGCGGAGCTCCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS TCA 90 bp | CCAGTGCATCCAGCATCCCGGGGCTGCCTCGAGCCAGCGCGTGATTaGGCTGTAGTGAGCGCAGCGCAGGCAGCCCGCGAAAGGCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVHPASRGCLEPARD*AVVSAAQAARERRG Trigger: ACCGCGCCTTTCGCGGGCTGCCTGCGCTGCGCTCACTACAGCTCAATCACGCGCTGGCTCGAGGCAGCCCCGGGATGCTGGATGCACTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS TCA 90 bp | GCGTCCAGTGCATCCAGCATCCCGGGGCTGCCTCGAGCCAGCGCGTaGTTGAGCTGTAGTGAGCGCAGCGCAGGCAGCCCGCGAAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASSASSIPGLPRASA*LSCSERSAGSPRKA Trigger: CGCCTTTCGCGGGCTGCCTGCGCTGCGCTCACTACAGCTCAATCACGCGCTGGCTCGAGGCAGCCCCGGGATGCTGGATGCACTGGACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGGAGGACCGTGTGGATGGTAGGCCGGCCAGCGCGTaGACACGCGCATCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGMRGGSKEFPGEDRVDGRPASA*TRASSC Trigger: GCAGCTGGATGCGCGTGTCAACGCGCTGGCCGGCCT...ACCATCCACACGGTCCTCCCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGAGGAAGACCTTCCTGTGCAGAGGCAGCACAGGCCTGCCATTCTGCCTAGGCGGCTCAGCGCGTaGCCTACCAAGCCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEEEDLPVQRQHRPAILPRRLSA*PTKPSR Trigger: CCTGCTGGGCTTGGTAGGCAACGCGCTGAGCCGCCT...AGGCAGAATGGCAGGCCTGTGCTGCCTCTGCACAGGAAGGTCTTCCTCCTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 90 bp | CTGCATCCTGCTCGTAGCGGTAGTGGTAGCCCTCCATCTGATCTCTaGAGGCCTCGCGCAAATTGTGCATCCAGCGTTGGATGCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHPARSGSGSPPSDL*RPRANCASSVGCRG Trigger: GCCGCGGCATCCAACGCTGGATGCACAATTTGCGCGAGGCCTGCAGAGATCAGATGGAGGGCTACCACTACCGCTACGAGCAGGATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGCTAAGGCTTGGATTCTACACCAAGCCTTCCTTGCCCCTGGCATGAAAACGCGCTCGGTGGCGTaGTGCAGCCAGGCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKAKAWILHQAFLAPGMKTRSVA*CSQASR Trigger: CCTGCTGGCCTGGCTGCACAACGCCACCGAGCGCGT...TTTCATGCCAGGGGCAAGGAAGGCTTGGTGTAGAATCCAAGCCTTAGCCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | AGACTCCATCCCCTTCCAGAAGGCATGAGAGGTGGTAGCAAGGAGTTCCCAGGGACTACCTCGATGTTGTaGTGTGTGAGGCGCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLHPLPEGMRGGSKEFPGTTSML*CVRRSA Trigger: CGCGCTGCGCCTCACACACAACAACATCGAGGTAGT...CCCTGGGAACTCCTTGCTACCACCTCTCATGCCTTCTGGAAGGGGATGGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGCTAAGGCTTGGATTCTACACCAAGCCTTCCTTGCCCCTGGCATGAAACCACAGCTCAGTGGGTaGTCCGCCAGCAGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RKAKAWILHQAFLAPGMKPQLSG*SASSRR Trigger: GCGCCTGCTGCTGGCGGACAACCCACTGAGCTGTGG...TTTCATGCCAGGGGCAAGGAAGGCTTGGTGTAGAATCCAAGCCTTAGCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | GATTTCTGGGTTTTTGATCTGGAAACTCTAAGGCCAGGGAAAGAGTACACCTTGCCCACGATGGTGAGGTaGCGCGCGTCGGGTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DFWVFDLETLRPGKEYTLPTMVR*RASGGT Trigger: CGTGCCACCCGACGCGCGCAACCTCACCATCGTGGG...CAAGGTGTACTCTTTCCCTGGCCTTAGAGTTTCCAGATCAAAAACCCAGAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAGGTGGGACAAAAAGCTCAAACTTCATAAAAACCTTCCAAAGAGACCATCTACTACCTCGATGTaGTTGTGTGTGAGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLRWDKKLKLHKNLPKRPSTTSM*LCVRRS Trigger: GCTGCGCCTCACACACAACAACATCGAGGTAGTAGA...TGGTCTCTTTGGAAGGTTTTTATGAAGTTTGAGCTTTTTGTCCCACCTCAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CCA 72 bp | CGCAGCGCAGGCGGCGCGCGTCGGGTACGCGCTCGGTaGCGTTGTGCAGCCAGGCCAGCAGGGGGCGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSAGGARRVRAR*RCAARPAGGAR Trigger: CCTCGCGCCCCCTGCTGGCCTGGCTGCACAACGCCACCGAGCGCGTACCCGACGCGCGCCGCCTGCGCTGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CCA 72 bp | GTTGGCGCCCACGATGGTGAGGTTGCGCGCGTCGGGTaGCACGTCCCGGGGCGGCTGCCGGAGCTCCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGAHDGEVARVG*HVPGRLPELRA Trigger: GGCGCGGAGCTCCGGCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CAA 90 bp | CCCTCGCCCCCTCCCGCGAAGGCTGCGGCGCGCAGCACGGTCAGGTaGGCGCCCACGATGGTGAGGTTGCGCGCGTCGGGTGGCACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSPPPAKAAARSTVR*APTMVRLRASGGTS Trigger: GGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAACCTGACCGTGCTGCGCGCCGCAGCCTTCGCGGGAGGGGGCGAGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS TCA 72 bp | CGGCGCGCAGCACGGTCAGGTTGGCGCCCACGATGGTaGGGTTGCGCGCGTCGGGTGGCACGTCCCGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRAARSGWRPRW*GCARRVARPGA Trigger: CGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAACCTGACCGTGCTGCGCGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 72 bp | AGGTTGCGCGCGTCGGGTGGCACGTCCCGGGGCGGCTaGCGGAGCTCCGCGCCCGACGCGCAGCGCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: RLRASGGTSRGG*RSSAPDAQRNI Trigger: AATGTTGCGCTGCGCGTCGGGCGCGGAGCTCCGGCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 72 bp | AGGCGGCGCGCGTCGGGTACGCGCTCGGTGGCGTTGTaGAGCCAGGCCAGCAGGGGGCGCGAGGTGCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRASGTRSVAL*SQASRGREVHP Trigger: TGGGTGCACCTCGCGCCCCCTGCTGGCCTGGCTGCACAACGCCACCGAGCGCGTACCCGACGCGCGCCGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CAA 72 bp | GCGCTCAGCTCGTCCGGGCCCAGGCCGGCCAGCGCGTaGACACGCGCATCCAGCTGCTCCAGGCGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSSSGPRPASA*TRASSCSRRGR Trigger: CCTGCCCCGCCTGGAGCAGCTGGATGCGCGTGTCAACGCGCTGGCCGGCCTGGGCCCGGACGAGCTGAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 72 bp | GGCGCAGCGCGGCGAGTGGCAGGCGGCTCAGCGCGTTaGCTACCAAGCCCAGCAGGCGAAGCTCGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAARRVAGGSAR*LPSPAGEARPG Trigger: CCCTGGCCGAGCTTCGCCTGCTGGGCTTGGTAGGCAACGCGCTGAGCCGCCTGCCACTCGCCGCGCTGCGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CAA 72 bp | CGCAGCACGGTCAGGTTGGCGCCCACGATGGTGAGGTaGCGCGCGTCGGGTGGCACGTCCCGGGGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSTVRLAPTMVR*RASGGTSRGGC Trigger: GCAGCCGCCCCGGGACGTGCCACCCGACGCGCGCAACCTCACCATCGTGGGCGCCAACCTGACCGTGCTGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CAA 72 bp | AGGCGCAGCGCGGCGAGTGGCAGGCGGCTCAGCGCGTaGCCTACCAAGCCCAGCAGGCGAAGCTCGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSAASGRRLSA*PTKPSRRSSAR Trigger: CCTGGCCGAGCTTCGCCTGCTGGGCTTGGTAGGCAACGCGCTGAGCCGCCTGCCACTCGCCGCGCTGCGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS TCA 72 bp | CCAGCATCCCGGGGCTGCCTCGAGCCAGCGCGTGATTaGGCTGTAGTGAGCGCAGCGCAGGCAGCCCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PASRGCLEPARD*AVVSAAQAARE Trigger: TTCGCGGGCTGCCTGCGCTGCGCTCACTACAGCTCAATCACGCGCTGGCTCGAGGCAGCCCCGGGATGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS GCA 72 bp | CCGCGCCCGACGCGCAGCGCAACATTAACCGGGGGCTaGCGAAGCAGTAACACTGGAAGGGACAGGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPTRSATLTGG*RSSNTGRDRAR Trigger: CCGCGCCCTGTCCCTTCCAGTGTTACTGCTTCGGCAGCCCCCGGTTAATGTTGCGCTGCGCGTCGGGCGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
||
| CDS CAA 90 bp | CTGGGCAACCCGTCGAAGGCACCGTCCTCTACTACCTCGATGTTGTaGTGTGTGAGGCGCAGCGCGGTAAGGAGCGGTAGGCGCACGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGNPSKAPSSTTSML*CVRRSAVRSGRRTP Trigger: CGGCGTGCGCCTACCGCTCCTTACCGCGCTGCGCCTCACACACAACAACATCGAGGTAGTAGAGGACGGTGCCTTCGACGGGTTGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| CDS CAA 90 bp | AGGCTGGGCAACCCGTCGAAGGCACCGTCCTCTACTACCTCGATGTaGTTGTGTGTGAGGCGCAGCGCGGTAAGGAGCGGTAGGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: RLGNPSKAPSSTTSM*LCVRRSAVRSGRRT Trigger: CGTGCGCCTACCGCTCCTTACCGCGCTGCGCCTCACACACAACAACATCGAGGTAGTAGAGGACGGTGCCTTCGACGGGTTGCCCAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| CDS CAA 72 bp | CCGTCGAAGGCACCGTCCTCTACTACCTCGATGTTGTaGTGTGTGAGGCGCAGCGCGGTAAGGAGCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PSKAPSSTTSML*CVRRSAVRSGR Trigger: CCTACCGCTCCTTACCGCGCTGCGCCTCACACACAACAACATCGAGGTAGTAGAGGACGGTGCCTTCGACGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| CDS CAA 72 bp | AACCCGTCGAAGGCACCGTCCTCTACTACCTCGATGTaGTTGTGTGTGAGGCGCAGCGCGGTAAGGAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: NPSKAPSSTTSM*LCVRRSAVRSG Trigger: ACCGCTCCTTACCGCGCTGCGCCTCACACACAACAACATCGAGGTAGTAGAGGACGGTGCCTTCGACGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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| CDS GCA 72 bp | GCTCGTAGCGGTAGTGGTAGCCCTCCATCTGATCTCTaGAGGCCTCGCGCAAATTGTGCATCCAGCGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ARSGSGSPPSDL*RPRANCASSVG Trigger: TCCAACGCTGGATGCACAATTTGCGCGAGGCCTGCAGAGATCAGATGGAGGGCTACCACTACCGCTACGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178124.3 |
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