Pregenerated sensors for TPBG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035274Ensembl transcript IDs: ENSMUST00000006559.14, ENSMUST00000098500.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGACACTTCCTGTTCACTGTAAGTGGCACATGATGGCAGAGGGGTaGCGGGATAGAGACGAGACAAGAGTATCGGATGACAAGAATGTT | + |
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Preference number: 1 (lower is better) Translates to: TTLPVHCKWHMMAEG*RDRDETRVSDDKNV Trigger: AACATTCTTGTCATCCGATACTCTTGTCTCGTCTCTATCCCGCCACCCCTCTGCCATCATGTGCCACTTACAGTGAACAGGAAGTGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 90 bp | TGGATGCAGGTGCTCTTATGCACTACAAAGTTCTATGTAAGAGCTTaGTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: WMQVLLCTTKFYVRA*YGLQAVWGCNISSI Trigger: GATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCACCTGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 90 bp | CAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATaGACTACAAAGTTCTATGTAAGAGCTTGCTACGGTCTGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: QNSKMYACSWMQVLL*TTKFYVRACYGLQA Trigger: TGCCTGCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 90 bp | CGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTaGAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATTTT | + |
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Preference number: 1 (lower is better) Translates to: RRHRGVPKGIGKINM*SCSCPYINRTHRDF Trigger: AAAATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR CCA 90 bp | GATACTTTATTTTCACACATTTATTGCCACCACATGACTCACACTTaGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: DTLFSHIYCHHMTHT*LSNSMEQLHSVWLM Trigger: CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAATAAATGTGTGAAAATAAAGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGAATCCAAGTCCATGCTaGGACTTGAGAGAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLNPSPC*DLRERK Trigger: TTTCCTCTCTCTCAAGTCGCAGCATGGACTTGGATT...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGTTCTATGTAAGAGCTTaGTACGGTCTGCAGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLFYVRA*YGLQAV Trigger: AACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAA...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCGGTCTGCAGGCAGTTTaGGGATGCAATATTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPPHDSHLALKFHGATSFGLQAV*GCNISS Trigger: GGAGGAAATATTGCATCCCCAAACTGCCTGCAGACC...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGCACATGACTCACACTTaGCTCTCAAATTCCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLHMTHT*LSNSME Trigger: CTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTG...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTGCTACACCTTGAACTaGACTAATCCAAGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: RACYGLQAVWGCNISSIICYTLN*TNPSPC Trigger: GCATGGACTTGGATTAGTTCAGTTCAAGGTGTAGCA...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCATGTACGCATGCTCTTaGATGCAGGTGCTCTTATGC | + |
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Preference number: 2 (lower is better) Translates to: LPPHDSHLALKFHGATSFMYACS*MQVLLC Trigger: GCATAAGAGCACCTGCATCCAAGAGCATGCGTACAT...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR CAA 90 bp | TTGGATGCAGGTGCTCTTATGCACTACAAAGTTCTATGTAAGAGCTaGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LDAGALMHYKVLCKS*LRSAGSLGMQYFLH Trigger: ATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCACCTGCATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTATGCTACACCTTGAACTaGACTAATCCAAGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: SLLRSAGSLGMQYFLHHLCYTLN*TNPSPC Trigger: GCATGGACTTGGATTAGTTCAGTTCAAGGTGTAGCA...TAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCGGTCTGCAGGCAGTTTaGGGATGCAATATTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NMQNSKMYACSWMQVLLCGLQAV*GCNISS Trigger: GGAGGAAATATTGCATCCCCAAACTGCCTGCAGACC...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGGGCTCTCAAATTCCATaGAGCAACTTCATTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLGSQIP*SNFIQF Trigger: AAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCC...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTAATCTGTGCTACACCTTaGACTGAACTAATCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLLRSAGSLGMQYFLHHLICATP*TELIQV Trigger: GACTTGGATTAGTTCAGTTCAAGGTGTAGCACAGAT...TAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCACAAAGTGGCAGCTGTaGCATGTTTACCATAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPPHDSHLALKFHGATSFTKWQL*HVYHKG Trigger: TCCTTTATGGTAAACATGTCACAGCTGCCACTTTGT...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCAATCCAAGTCCATGCTaGGACTTGAGAGAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: NMQNSKMYACSWMQVLLCNPSPC*DLRERK Trigger: TTTCCTCTCTCTCAAGTCGCAGCATGGACTTGGATT...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR TCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCATCTGTGCTACACCTTaGACTGAACTAATCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: NMQNSKMYACSWMQVLLCICATP*TELIQV Trigger: GACTTGGATTAGTTCAGTTCAAGGTGTAGCACAGAT...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCCAGGCAGTTTGGGGATaGAATATTTCCTCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: NMQNSKMYACSWMQVLLCQAVWG*NISSII Trigger: AATGATGGAGGAAATATTGCATCCCCAAACTGCCTG...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCACGCATGCTCTTGGATaGAGGTGCTCTTATGCACTA | + |
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Preference number: 2 (lower is better) Translates to: TFIDASDLLSEVKVEPQFTHALG*RCSYAL Trigger: TAGTGCATAAGAGCACCTGCATCCAAGAGCATGCGT...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATGATGCAGGTGCTCTTATaGACTACAAAGTTCTATGTA | + |
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Preference number: 2 (lower is better) Translates to: THTWLSNSMEQLHSVWLMMQVLL*TTKFYV Trigger: TACATAGAACTTTGTAGTGCATAAGAGCACCTGCAT...CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR CAA 90 bp | AGATACTTTATTTTCACACATTTATTGCCACCACATGACTCACACTaGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: RYFIFTHLLPPHDSH*ALKFHGATSFSLAN Trigger: ATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAATAAATGTGTGAAAATAAAGTATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR CCA 72 bp | CCTGTTCACTGTAAGTGGCACATGATGGCAGAGGGGTaGCGGGATAGAGACGAGACAAGAGTATCGGATGAC | + |
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Preference number: 3 (lower is better) Translates to: PVHCKWHMMAEG*RDRDETRVSDD Trigger: GTCATCCGATACTCTTGTCTCGTCTCTATCCCGCCACCCCTCTGCCATCATGTGCCACTTACAGTGAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGCGGTCTGCAGGCAGTTaGGGGATGCAATATTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLRSAGS*GMQYFL Trigger: GAGGAAATATTGCATCCCCAAACTGCCTGCAGACCG...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGCCACATGACTCACACTaGGCTCTCAAATTCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLPHDSH*ALKFHG Trigger: TCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGG...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCCTGAGGCAGCTTCCGTaGAATGTTATCTGTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: LPPHDSHLALKFHGATSFLRQLP*NVICAT Trigger: TGTAGCACAGATAACATTCAACGGAAGCTGCCTCAG...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CAA 90 bp | ACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATGAATGTACGCATGCTCTaGGATGCAGGTGCTCTTATG | + |
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Preference number: 3 (lower is better) Translates to: THTWLSNSMEQLHSVWLMNVRML*DAGALM Trigger: CATAAGAGCACCTGCATCCAAGAGCATGCGTACATT...CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 72 bp | GTGCTCTTATGCACTACAAAGTTCTATGTAAGAGCTTaGTACGGTCTGCAGGCAGTTTGGGGATGCAATATT | + |
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Preference number: 3 (lower is better) Translates to: VLLCTTKFYVRA*YGLQAVWGCNI Trigger: AATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR TCA 72 bp | ATCCATCATTTCAGAATTCTCTCCAGTCTATTTATATaGAGGCACTGCTCCAGGCTGATTCTCAGCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: IHHFRILSSLFI*RHCSRLILSSA Trigger: AGCAGAGCTGAGAATCAGCCTGGAGCAGTGCCTTCATATAAATAGACTGGAGAGAATTCTGAAATGATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 72 bp | AAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATaGACTACAAAGTTCTATGTAAGAGCTTGCTACGGT | + |
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Preference number: 3 (lower is better) Translates to: KMYACSWMQVLL*TTKFYVRACYG Trigger: ACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR-3UTR CAA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCCTGAGGCAGCTTCCGTaGAATGTTATCTGTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TFIDASDLLSEVKVEPQFLRQLP*NVICAT Trigger: TGTAGCACAGATAACATTCAACGGAAGCTGCCTCAG...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR GCA 72 bp | CGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTaGAGTTGTTCATGTCCTTACATTAACAGAACACAC | + |
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Preference number: 3 (lower is better) Translates to: RGVPKGIGKINM*SCSCPYINRTH Trigger: GTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR CCA 72 bp | TTTAATATGCAGAACAGTAAAATGTACGCATGCTCTTaGATGCAGGTGCTCTTATGCACTACAAAGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: FNMQNSKMYACS*MQVLLCTTKFY Trigger: ATAGAACTTTGTAGTGCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| 3UTR TCA 72 bp | ACATGTAAAGCAAATGTAGACATGAATCACTTAGCATaGAAACGGGTCTTAACATTTATTGACGCAAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: TCKANVDMNHLA*KRVLTFIDASD Trigger: GTCACTTGCGTCAATAAATGTTAAGACCCGTTTTCATGCTAAGTGATTCATGTCTACATTTGCTTTACATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCGCTCCTCCAGGGGGCTaGGGGCCGAGACGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NMQNSKMYACSWMQVLLCAPPGG*GPRRWR Trigger: ACGCCAGCGTCTCGGCCCCCAGCCCCCTGGAGGAGC...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR TCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCTCGGAGTGCAAGGCCTaGGCGCAGAGCTGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPPHDSHLALKFHGATSFSECKA*AQSCCH Trigger: GTGGCAGCAGCTCTGCGCTCAGGCCTTGCACTCCGA...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGTTGGTGAGAGGGTTGTaGCTGAGGTCAAGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLLVRGL*LRSSRR Trigger: GCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAA...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CCA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCTGGGGGCCGAGACGCTaGCGTTGCTGCCCGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QASRSTERNRENKHVQLFWGPRR*RCCPQR Trigger: CCTTTGCGGGCAGCAACGCCAGCGTCTCGGCCCCCA...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CCA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCGCTCCTCCAGGGGGCTaGGGGCCGAGACGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: TFIDASDLLSEVKVEPQFAPPGG*GPRRWR Trigger: ACGCCAGCGTCTCGGCCCCCAGCCCCCTGGAGGAGC...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGCTGAGACTCGGCAGTTaGGCTAGTAAGTCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLLRLGS*ASKSRG Trigger: GCCTCGGGACTTACTAGCCCAACTGCCGAGTCTCAG...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR GCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCCCGAGACGCTGGCGTTaGTGCCCGCAAAGGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: NMQNSKMYACSWMQVLLCPRRWR*CPQRRR Trigger: CCTTCGCCTTTGCGGGCAGCAACGCCAGCGTCTCGG...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR GCA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTCAGGTTGCGGAAGGATaGGTAGGTCAGGCTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LRRHRGVPKGIGKINMCSQVAEG*VGQAHQ Trigger: CTGGTGAGCCTGACCTACGCATCCTTCCGCAACCTG...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR TCA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTGCCAAGGTGGAGTTGTaGAGGACCTTGAGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRHRGVPKGIGKINMCSAKVEL*RTLRAL Trigger: CAATGCCCTCAAGGTCCTTCACAACTCCACCTTGGC...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTCGAGGTGTGTCAGGTTaGGGAAGGATGCGTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RACYGLQAVWGCNISSIIRGVSG*GRMRRS Trigger: TGACCTACGCATCCTTCCGCAACCTGACACACCTCG...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTGGGAGCACGGTCATCTaGTTGCCGGTAAGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRHRGVPKGIGKINMCSGSTVI*LPVRKR Trigger: CCTTTTCCTTACCGGCAACCAGATGACCGTGCTCCC...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCTGGGGGCCGAGACGCTaGCGTTGCTGCCCGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFIDASDLLSEVKVEPQFWGPRR*RCCPQR Trigger: CCTTTGCGGGCAGCAACGCCAGCGTCTCGGCCCCCA...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTGGCAGGAAAAGAAAGTaGTTGCTGGCTAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRHRGVPKGIGKINMCSGRKRK*LLASSR Trigger: CCTGGAGCTAGCCAGCAATCACTTTCTTTTCCTGCC...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTAGCCAAGGTGGAGTTGTaGAGGACCTTGAGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSAGSLGMQYFLHHLAKVEL*RTLRAL Trigger: CAATGCCCTCAAGGTCCTTCACAACTCCACCTTGGC...TAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTATGCTCGAAGGCACCTaGACACACTTCCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RACYGLQAVWGCNISSIIMLEGT*THFLQV Trigger: CACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCAT...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCCGAGGTGTGTCAGGTTaGGGAAGGATGCGTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPHDSHLALKFHGATSFRGVSG*GRMRRS Trigger: TGACCTACGCATCCTTCCGCAACCTGACACACCTCG...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCGGGAGCACGGTCATCTaGTTGCCGGTAAGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPHDSHLALKFHGATSFGSTVI*LPVRKR Trigger: CCTTTTCCTTACCGGCAACCAGATGACCGTGCTCCC...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTGCATTGTCCTCCAAGTaGAGGCTTTCGAGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RACYGLQAVWGCNISSIIALSSK*RLSRCV Trigger: GACACACCTCGAAAGCCTCCACTTGGAGGACAATGC...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCTCAGGGGGCACGATGTaGTTCAGGATCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NMQNSKMYACSWMQVLLCSGGTM*FRISSS Trigger: GGAGGAGCTGATCCTGAATCACATCGTGCCCCCTGA...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATTCGGAGTGCAAGGCCTaGGCGCAGAGCTGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KINMCSCSCPYINRTHRDSECKA*AQSCCH Trigger: GTGGCAGCAGCTCTGCGCTCAGGCCTTGCACTCCGA...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGCCCTGCAGGCATCTCTaGTGTTATGCATCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLPCRHL*CYASTF Trigger: AAAAGTGGATGCATAACATCAGAGATGCCTGCAGGG...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCCAGGTTGCGGAAGGATaGGTAGGTCAGGCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMQNSKMYACSWMQVLLCQVAEG*VGQAHQ Trigger: CTGGTGAGCCTGACCTACGCATCCTTCCGCAACCTG...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTCATTTTCTCCGGGAATaGGCAGGTAAGCCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRHRGVPKGIGKINMCSHFLRE*AGKPGF Trigger: AAAGCCAGGCTTACCTGCGCATTCCCGGAGAAAATG...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCCACACTTCCTTCAGGTaGTTGCCGCTGAGGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QASRSTERNRENKHVQLFHTSFR*LPLRLS Trigger: GCTCAACCTCAGCGGCAACCACCTGAAGGAAGTGTG...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCCTGAGACTCGGCAGTTaGGCTAGTAAGTCCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NMQNSKMYACSWMQVLLCLRLGS*ASKSRG Trigger: GCCTCGGGACTTACTAGCCCAACTGCCGAGTCTCAG...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGAAGCCTGGCTTTATCTaGCACCACCTCTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLKPGFI*HHLCLF Trigger: AAAGAGACAGAGGTGGTGCCAGATAAAGCCAGGCTT...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTGTGAAGGACCTTaGGGGCATTGTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPHDSHLALKFHGATSFSCEGP*GHCPPS Trigger: ACTTGGAGGACAATGCCCTCAAGGTCCTTCACAACT...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCTTGGTGAGAGGGTTGTaGCTGAGGTCAAGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TFIDASDLLSEVKVEPQFLVRGL*LRSSRR Trigger: GCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAA...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCGCATTGTCCTCCAAGTaGAGGCTTTCGAGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QASRSTERNRENKHVQLFALSSK*RLSRCV Trigger: GACACACCTCGAAAGCCTCCACTTGGAGGACAATGC...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | ACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATGGGCAGGAAAAGAAAGTaGTTGCTGGCTAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTWLSNSMEQLHSVWLMGRKRK*LLASSR Trigger: CCTGGAGCTAGCCAGCAATCACTTTCTTTTCCTGCC...CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTAAAGCCTGGCTTTATCTaGCACCACCTCTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSAGSLGMQYFLHHLKPGFI*HHLCLF Trigger: AAAGAGACAGAGGTGGTGCCAGATAAAGCCAGGCTT...TAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| 3UTR CAA 72 bp | GTTCTATGTAAGAGCTTGCTACGGTCTGCAGGCAGTTaGGGGATGCAATATTTCCTCCATCATTTAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCKSLLRSAGS*GMQYFLHHLGR Trigger: CCTACCTAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| 3UTR CAA 72 bp | GGTGCTCTTATGCACTACAAAGTTCTATGTAAGAGCTaGCTACGGTCTGCAGGCAGTTTGGGGATGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GALMHYKVLCKS*LRSAGSLGMQY Trigger: ATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAAGAGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR TCA 90 bp | ACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATGCCCTGCAGGCATCTCTaGTGTTATGCATCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THTWLSNSMEQLHSVWLMPCRHL*CYASTF Trigger: AAAAGTGGATGCATAACATCAGAGATGCCTGCAGGG...CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCATCTGGGGTCCGCATTaGTTTCGTATCTGTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPHDSHLALKFHGATSFIWGPH*FRICND Trigger: ATCATTACAGATACGAAATCAATGCGGACCCCAGAT...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATATGCTCGAAGGCACCTaGACACACTTCCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KINMCSCSCPYINRTHRDMLEGT*THFLQV Trigger: CACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCAT...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATAGTTGTGAAGGACCTTaGGGGCATTGTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KINMCSCSCPYINRTHRDSCEGP*GHCPPS Trigger: ACTTGGAGGACAATGCCCTCAAGGTCCTTCACAACT...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR GCA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATCATTTTCTCCGGGAATaGGCAGGTAAGCCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KINMCSCSCPYINRTHRDHFLRE*AGKPGF Trigger: AAAGCCAGGCTTACCTGCGCATTCCCGGAGAAAATG...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR TCA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATATCTGGGGTCCGCATTaGTTTCGTATCTGTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KINMCSCSCPYINRTHRDIWGPH*FRICND Trigger: ATCATTACAGATACGAAATCAATGCGGACCCCAGAT...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS CCA 90 bp | CCAGGAAGGCTGCCGGGGAGGTGGAAGACGAGGGTACCGAAGAGCTaGGGGCCGACGCGGAGACCCAACCCAGCAGCACTAGCGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRLPGRWKTRVPKS*GPTRRPNPAALAPA Trigger: GGCTGGCGCTAGTGCTGCTGGGTTGGGTCTCCGCGTCGGCCCCCAGCTCTTCGGTACCCTCGTCTTCCACCTCCCCGGCAGCCTTCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS GCA 90 bp | GCTGAGGTCAAGCCGGCGCAGACCCGGCAGATGCTCGAAGGCACCTaGACACACTTCCTTCAGGTGGTTGCCGCTGAGGTTGAGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEVKPAQTRQMLEGT*THFLQVVAAEVERL Trigger: GAGGCGCTCAACCTCAGCGGCAACCACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCATCTGCCGGGTCTGCGCCGGCTTGACCTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS CCA 90 bp | TTGCTGCCCGCAAAGGCGAAGGCGCTGAGGTTGGTGAGAGGGTTGTaGCTGAGGTCAAGCCGGCGCAGACCCGGCAGATGCTCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPAKAKALRLVRGL*LRSSRRRPGRCSKA Trigger: TGCCTTCGAGCATCTGCCGGGTCTGCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGCGGGCAGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS TCA 90 bp | GCAGGGATTGGGGAAGGACAGCGTCACAGTCCAGGTCAGAGCTGTTaGGGTCTAAGAGGCCACGATTCCTCATTTTCTCCGGGAATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGIGEGQRHSPGQSC*GLRGHDSSFSPGMR Trigger: GCGCATTCCCGGAGAAAATGAGGAATCGTGGCCTCTTAGACCTCAACAGCTCTGACCTGGACTGTGACGCTGTCCTTCCCCAATCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTGCCGAGACGCTGGCGTaGCTGCCCGCAAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRHRGVPKGIGKINMCSAETLA*LPAKAK Trigger: CTTCGCCTTTGCGGGCAGCAACGCCAGCGTCTCGGC...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS TCA 90 bp | CCATGTAGCAGTCGCAAACCCAGGGATTGTTGTCCAGGAACACCTTaGCATGAGCCAGGCCGTGCCACTCAGCCAAGGTGGAGTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCSSRKPRDCCPGTP*HEPGRATQPRWSCE Trigger: TTCACAACTCCACCTTGGCTGAGTGGCACGGCCTGGCTCATGTCAAGGTGTTCCTGGACAACAATCCCTGGGTTTGCGACTGCTACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTGCACTAGCGCCAGCCTaGCCAACCTCAGCCGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RACYGLQAVWGCNISSIIALAPA*PTSAVR Trigger: ACGGACGGCTGAGGTTGGCAAGGCTGGCGCTAGTGC...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCTGGTTGCCGCTGAGGTaGAGCGCCTCCAGGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPPHDSHLALKFHGATSFWLPLR*SASRSA Trigger: CGCCGACCTGGAGGCGCTCAACCTCAGCGGCAACCA...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | CTCCGCAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTGCGAAGGCGCTGAGGTaGGTGAGAGGGTTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRRHRGVPKGIGKINMCSAKALR*VRGLWL Trigger: CAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGC...ACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCGCCGAGACGCTGGCGTaGCTGCCCGCAAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QASRSTERNRENKHVQLFAETLA*LPAKAK Trigger: CTTCGCCTTTGCGGGCAGCAACGCCAGCGTCTCGGC...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTTAGCGAAGGCGCTGAGGTaGGTGAGAGGGTTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLRSAGSLGMQYFLHHLAKALR*VRGLWL Trigger: CAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGC...TAAATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | TTGCCACCACATGACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCACTTCCTTCAGGTGGTaGCCGCTGAGGTTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPHDSHLALKFHGATSFTSFRW*PLRLSA Trigger: GGCGCTCAACCTCAGCGGCAACCACCTGAAGGAAGT...GAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGTCATGTGGTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGAGGACCTTGAGGGCATaGTCCTCCAAGTGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLRTLRA*SSKWRL Trigger: AAGCCTCCACTTGGAGGACAATGCCCTCAAGGTCCT...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | CAGTTCCTTCAATCGATGGCCTGGAGACAGGTTAACGACACTTCCTGTTCACTGAGCACGGTCATCTGGTaGCCGGTAAGGAAAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QFLQSMAWRQVNDTSCSLSTVIW*PVRKRL Trigger: CAACCTTTTCCTTACCGGCAACCAGATGACCGTGCT...CAGTGAACAGGAAGTGTCGTTAACCTGTCTCCAGGCCATCGATTGAAGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCTGGTTGCCGCTGAGGTaGAGCGCCTCCAGGTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: TFIDASDLLSEVKVEPQFWLPLR*SASRSA Trigger: CGCCGACCTGGAGGCGCTCAACCTCAGCGGCAACCA...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTTGCTACGGTCTGCAGGCAGTTTGGGGATGCAATATTTCCTCCATCATTAGCACGGTCATCTGGTaGCCGGTAAGGAAAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RACYGLQAVWGCNISSIISTVIW*PVRKRL Trigger: CAACCTTTTCCTTACCGGCAACCAGATGACCGTGCT...AATGATGGAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCAGGACCTTGAGGGCATaGTCCTCCAAGTGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QASRSTERNRENKHVQLFRTLRA*SSKWRL Trigger: AAGCCTCCACTTGGAGGACAATGCCCTCAAGGTCCT...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCGGAAGTCTGCAGGGATaGGGGAAGGACAGCGTCACA | + |
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Preference number: 5 (lower is better) Translates to: NMQNSKMYACSWMQVLLCGSLQG*GKDSVT Trigger: TGTGACGCTGTCCTTCCCCAATCCCTGCAGACTTCC...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | ACTCACACTTGGCTCTCAAATTCCATGGAGCAACTTCATTCAGTTTGGCTAATGGGAAGTCTGCAGGGATaGGGGAAGGACAGCGTCACA | + |
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Preference number: 5 (lower is better) Translates to: THTWLSNSMEQLHSVWLMGSLQG*GKDSVT Trigger: TGTGACGCTGTCCTTCCCCAATCCCTGCAGACTTCC...CATTAGCCAAACTGAATGAAGTTGCTCCATGGAATTTGAGAGCCAAGTGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCACTTCCTTCAGGTGGTaGCCGCTGAGGTTGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: TFIDASDLLSEVKVEPQFTSFRW*PLRLSA Trigger: GGCGCTCAACCTCAGCGGCAACCACCTGAAGGAAGT...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | CAGGCATCGAGGAGTACCGAAAGGAATAGGGAAAATAAACATGTGCAGTTGTTCCAAACCCAGGGATTGTaGTCCAGGAACACCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: QASRSTERNRENKHVQLFQTQGL*SRNTLT Trigger: TGTCAAGGTGTTCCTGGACAACAATCCCTGGGTTTG...GAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTCGATGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | AATATGCAGAACAGTAAAATGTACGCATGCTCTTGGATGCAGGTGCTCTTATGCCAAACCCAGGGATTGTaGTCCAGGAACACCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: NMQNSKMYACSWMQVLLCQTQGL*SRNTLT Trigger: TGTCAAGGTGTTCCTGGACAACAATCCCTGGGTTTG...GCATAAGAGCACCTGCATCCAAGAGCATGCGTACATTTTACTGTTCTGCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | ACATTTATTGACGCAAGTGACCTCCTATCTGAAGTAAAAGTTGAACCTCAGTTCTCGCAAACCCAGGGATaGTTGTCCAGGAACACCTTG | + |
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Preference number: 5 (lower is better) Translates to: TFIDASDLLSEVKVEPQFSQTQG*LSRNTL Trigger: CAAGGTGTTCCTGGACAACAATCCCTGGGTTTGCGA...GAACTGAGGTTCAACTTTTACTTCAGATAGGAGGTCACTTGCGTCAATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS-3UTR CAA 90 bp | AAAATAAACATGTGCAGTTGTTCATGTCCTTACATTAACAGAACACACCGGGATTCGCAAACCCAGGGATaGTTGTCCAGGAACACCTTG | + |
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Preference number: 5 (lower is better) Translates to: KINMCSCSCPYINRTHRDSQTQG*LSRNTL Trigger: CAAGGTGTTCCTGGACAACAATCCCTGGGTTTGCGA...ATCCCGGTGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CCA 72 bp | CTGAGGTTGAGCGCCTCCAGGTCGGCGAGCGGCGGCTaGCGGGCGAAGGCGCCCGCCGGGAGCACGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LRLSASRSASGG*RAKAPAGSTVI Trigger: GATGACCGTGCTCCCGGCGGGCGCCTTCGCCCGCCAGCCGCCGCTCGCCGACCTGGAGGCGCTCAACCTCAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CAA 90 bp | GCCGAGACGCTGGCGTTGCTGCCCGCAAAGGCGAAGGCGCTGAGGTaGGTGAGAGGGTTGTGGCTGAGGTCAAGCCGGCGCAGACCCGGC | + |
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Preference number: 6 (lower is better) Translates to: AETLALLPAKAKALR*VRGLWLRSSRRRPG Trigger: GCCGGGTCTGCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGCGGGCAGCAACGCCAGCGTCTCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CCA 72 bp | CTGCCGGGGAGGTGGAAGACGAGGGTACCGAAGAGCTaGGGGCCGACGCGGAGACCCAACCCAGCAGCACTA | + |
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Preference number: 6 (lower is better) Translates to: LPGRWKTRVPKS*GPTRRPNPAAL Trigger: TAGTGCTGCTGGGTTGGGTCTCCGCGTCGGCCCCCAGCTCTTCGGTACCCTCGTCTTCCACCTCCCCGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CCA 72 bp | GCACGATGTGATTCAGGATCAGCTCCTCCAGGGGGCTaGGGGCCGAGACGCTGGCGTTGCTGCCCGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ARCDSGSAPPGG*GPRRWRCCPQR Trigger: CCTTTGCGGGCAGCAACGCCAGCGTCTCGGCCCCCAGCCCCCTGGAGGAGCTGATCCTGAATCACATCGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CAA 72 bp | CTGGCGTTGCTGCCCGCAAAGGCGAAGGCGCTGAGGTaGGTGAGAGGGTTGTGGCTGAGGTCAAGCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LALLPAKAKALR*VRGLWLRSSRR Trigger: GCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGCGGGCAGCAACGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CAA 90 bp | GCGTTGCTGCCCGCAAAGGCGAAGGCGCTGAGGTTGGTGAGAGGGTaGTGGCTGAGGTCAAGCCGGCGCAGACCCGGCAGATGCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALLPAKAKALRLVRG*WLRSSRRRPGRCSK Trigger: CTTCGAGCATCTGCCGGGTCTGCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGCGGGCAGCAACGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CCA 72 bp | GCAAAGGCGAAGGCGCTGAGGTTGGTGAGAGGGTTGTaGCTGAGGTCAAGCCGGCGCAGACCCGGCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: AKAKALRLVRGL*LRSSRRRPGRC Trigger: GCATCTGCCGGGTCTGCGCCGGCTTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS GCA 72 bp | GGAGTGCAAGGCCTGAGCGCAGAGCTGCTGCCACCATaGCTTCGAAGGCCACCATACCCTCGAAGCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: GVQGLSAELLPP*LRRPPYPRSSR Trigger: ACGGGAGCTTCGAGGGTATGGTGGCCTTCGAAGGCATGGTGGCAGCAGCTCTGCGCTCAGGCCTTGCACTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CAA 72 bp | TGCTCGAAGGCACCTGCACACACTTCCTTCAGGTGGTaGCCGCTGAGGTTGAGCGCCTCCAGGTCGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSKAPAHTSFRW*PLRLSASRSAS Trigger: GCTCGCCGACCTGGAGGCGCTCAACCTCAGCGGCAACCACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS GCA 72 bp | AAGCCGGCGCAGACCCGGCAGATGCTCGAAGGCACCTaGACACACTTCCTTCAGGTGGTTGCCGCTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: KPAQTRQMLEGT*THFLQVVAAEV Trigger: AACCTCAGCGGCAACCACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCATCTGCCGGGTCTGCGCCGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS GCA 72 bp | TTGTGGCTGAGGTCAAGCCGGCGCAGACCCGGCAGATaGTCGAAGGCACCTGCACACACTTCCTTCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LWLRSSRRRPGR*SKAPAHTSFRW Trigger: CCACCTGAAGGAAGTGTGTGCAGGTGCCTTCGAGCATCTGCCGGGTCTGCGCCGGCTTGACCTCAGCCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS TCA 72 bp | AGTCGCAAACCCAGGGATTGTTGTCCAGGAACACCTTaGCATGAGCCAGGCCGTGCCACTCAGCCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRKPRDCCPGTP*HEPGRATQPRW Trigger: CCACCTTGGCTGAGTGGCACGGCCTGGCTCATGTCAAGGTGTTCCTGGACAACAATCCCTGGGTTTGCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS TCA 72 bp | GGGGAAGGACAGCGTCACAGTCCAGGTCAGAGCTGTTaGGGTCTAAGAGGCCACGATTCCTCATTTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GEGQRHSPGQSC*GLRGHDSSFSP Trigger: CGGAGAAAATGAGGAATCGTGGCCTCTTAGACCTCAACAGCTCTGACCTGGACTGTGACGCTGTCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS TCA 72 bp | AGTTGGGCTAGTAAGTCCCGAGGCAGGAAAAGAAAGTaGTTGCTGGCTAGCTCCAGGCGTGTAAGACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SWASKSRGRKRK*LLASSRRVRPR Trigger: CCGAGGTCTTACACGCCTGGAGCTAGCCAGCAATCACTTTCTTTTCCTGCCTCGGGACTTACTAGCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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| CDS CCA 72 bp | TTTCTCCGGGAATGCGCAGGTAAGCCTGGCTTTATCTaGCACCACCTCTGTCTCTTTAAGCCAAGCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: FLRECAGKPGFI*HHLCLFKPSHH Trigger: ATGGTGGCTTGGCTTAAAGAGACAGAGGTGGTGCCAGATAAAGCCAGGCTTACCTGCGCATTCCCGGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006559.14 ENSMUST00000098500.5 |
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