Pregenerated sensors for TOX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043668Ensembl transcript IDs: ENSMUST00000109621.10, ENSMUST00000176034.2, ENSMUST00000176616.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCCCAGCTACACTGCAGTTCTTATTGCCTATCTAATAGACACTTaGGAGGATCTCTTGATCTGTTACACATTCTTGCATAACCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LPSYTAVLIAYLIDT*EDLLICYTFLHNQS Trigger: ACTCTGGTTATGCAAGAATGTGTAACAGATCAAGAGATCCTCTCAAGTGTCTATTAGATAGGCAATAAGAACTGCAGTGTAGCTGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAGAAGTTCAAATAGCCTaGAAGTGTGGTTCACTCACT | + |
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Preference number: 2 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEEVQIA*KCGSLT Trigger: AGTGAGTGAACCACACTTCCAGGCTATTTGAACTTC...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGGTTCACTCACTTCTaGAGAAATAAGGCCATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEWFTHF*RNKAIF Trigger: AAAGATGGCCTTATTTCTCCAGAAGTGAGTGAACCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR CAA 90 bp | TGGGCTAACAGTGGCCATAGATATTGTCACAACATATACCGTGGTTaGATTCGGAGAAGTCATGGATACAAAGTAGAAGTAAATAAATCA | + |
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Preference number: 2 (lower is better) Translates to: WANSGHRYCHNIYRG*IRRSHGYKVEVNKS Trigger: TGATTTATTTACTTCTACTTTGTATCCATGACTTCTCCGAATCAAACCACGGTATATGTTGTGACAATATCTATGGCCACTGTTAGCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR-3UTR CAA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAAACATATACCGTGGTTaGATTCGGAGAAGTCATGGA | + |
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Preference number: 3 (lower is better) Translates to: SEQCPCGCIKIQSTDFTENIYRG*IRRSHG Trigger: TCCATGACTTCTCCGAATCAAACCACGGTATATGTT...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR-3UTR CAA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAACTATCTAATAGACACTaGAGAGGATCTCTTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: SEQCPCGCIKIQSTDFTELSNRH*RGSLDL Trigger: CAGATCAAGAGATCCTCTCAAGTGTCTATTAGATAG...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR GCA 72 bp | ATGTATAGTCGGCTAAAAGATGCTTCCCAGCTACACTaGAGTTCTTATTGCCTATCTAATAGACACTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: MYSRLKDASQLH*SSYCLSNRHLR Trigger: TCTCAAGTGTCTATTAGATAGGCAATAAGAACTGCAGTGTAGCTGGGAAGCATCTTTTAGCCGACTATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR TCA 72 bp | TACACTGCAGTTCTTATTGCCTATCTAATAGACACTTaGGAGGATCTCTTGATCTGTTACACATTCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: YTAVLIAYLIDT*EDLLICYTFLH Trigger: ATGCAAGAATGTGTAACAGATCAAGAGATCCTCTCAAGTGTCTATTAGATAGGCAATAAGAACTGCAGTGTA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGACCCAGGGTGGGGTCTaGCTCTGGAGGAGGCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQTQGGV*LWRRRD Trigger: ATCACGCCTCCTCCAGAGTCAGACCCCACCCTGGGT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGCTGGGTGGAGGTTGCTaGACCAACCATGGTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQLGGGC*TNHGRP Trigger: GGGACGACCATGGTTGGTTCAGCAACCTCCACCCAG...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGGGAAACTGGGGTGTaGACTCAGTTCCCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSGETGV*TQFPGK Trigger: CTTCCCAGGGAACTGAGTTCACACCCCAGTTTCCCC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGACTGTGGAAGAGTCTaGGGTGAGGCTGGGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQDCGRV*GEAGTV Trigger: GACAGTCCCAGCCTCACCTCAGACTCTTCCACAGTC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAAGATGCTGCTGTTGCTaGTGCTGCAGGTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSRCCCC*CCRCCC Trigger: GCAGCAGCACCTGCAGCAGCAGCAACAGCAGCATCT...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCTGCAACTGCTGCTaGAGCTGCTGTTGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCCNCC*SCCWLS Trigger: GCTCAGCCAACAGCAGCTGCAGCAGCAGTTGCAGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCAGCTGGAGATGCTaGTGCAACTGCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCSWRC*CNCCCS Trigger: GCTGCAGCAGCAGTTGCAGCAGCATCTCCAGCTGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCATGGCTGAGCTGCTGCTaGAGATGCTGCTGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSWLSCC*RCCCCC Trigger: GCAGCAACAGCAGCATCTCCAGCAGCAGCTCAGCCA...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGCTGACACTGGCTTCTaGGGCTCGTTGGGATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQADTGF*GSLGSF Trigger: GAAAGATCCCAACGAGCCTCAGAAGCCAGTGTCAGC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCTGCAACTGCATCTaGTGCTGCTGGGTTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCCNCI*CCWVCT Trigger: GGTGCAAACCCAGCAGCATCAGATGCAGTTGCAGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCATGCATCTGCTGCATCTaGTGCTGCTGCTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSCICCI*CCCCCC Trigger: GCAACAGCAGCAGCAGCAGCAGATGCAGCAGATGCA...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGGTGCTGCTGTAACTaGTGCTGCTGCATCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQWCCCN*CCCICC Trigger: GCAGCAGATGCAGCAGCAGCAGTTACAGCAGCACCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAATGTGCTGCAGTTGCTaGAGCTGGAGATGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSMCCSC*SWRCCC Trigger: GCAGCAGCATCTCCAGCTGCAGCAACTGCAGCACAT...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCATGTGCTGCAGTTaGTGCAGCTGGAGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCMCCS*CSWRCC Trigger: GCAGCATCTCCAGCTGCAGCAACTGCAGCACATGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGCCAAGGCTTGGCGTGTaGAATGTCTGCTCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQPRLGV*NVCSLA Trigger: TGCCAGTGAGCAGACATTCCACACGCCAAGCCTTGG...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCATTCGTCCCCAAGGCTTaGCGTGTGGAATGTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSFVPKA*RVECLL Trigger: GAGCAGACATTCCACACGCCAAGCCTTGGGGACGAA...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGAACTCAGTTCCCTaGGAAGGCAACGGATCGCTG | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSVNSVP*EGNGSL Trigger: CAGCGATCCGTTGCCTTCCCAGGGAACTGAGTTCAC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCATTGATGGTGGTCAGCTaGGCAGGAGGCATGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSLMVVS*AGGMIP Trigger: TGGGATCATGCCTCCTGCCCAGCTGACCACCATCAA...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGATGCCAGAGTCTGCTaGACAGAACGGATGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQDARVC*TERMVW Trigger: CCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAAAGGGCTCACCTGGGTaGAGGTTGCTGAACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSKGSPG*RLLNQP Trigger: TGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTT...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGATCGCTGAGAGTCTaGAAGGGTAGCAGTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSGSLRV*KGSSAS Trigger: TGATGCACTGCTACCCTTTCAGACTCTCAGCGATCC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGAAGGCAACGGATCGCTaGGAGTCTGAAAGGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQKATDR*ESERVA Trigger: TGCTACCCTTTCAGACTCTCAGCGATCCGTTGCCTT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGACTTGTGTGTGGCTCTaGTCCATGTGCAGCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQTCVWL*SMCSPL Trigger: CAATGGGCTGCACATGGATCAGAGCCACACACAAGT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGGCTGCAATGGTGACTaGTGTGACGATCTGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQGCNGD*CDDLAH Trigger: ATGAGCCAGATCGTCACATCAGTCACCATTGCAGCC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGATGGTCTGGGCTTCTaGAGATTCAGCAGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQDGLGF*RFSSSL Trigger: AAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGTTGATGCCAGAGTCTaGTGGACAGAACGGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQVDARV*WTERMV Trigger: GACCATCCGTTCTGTCCAGCAGACTCTGGCATCAAC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGTAACTGCTGCTGCTaGATCTGCTGCATCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCNCCC*ICCICC Trigger: GCAGCAGATGCAGCAGATGCAGCAGCAGCAGTTACA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCTGTAACTGCTGCTaGTGCATCTGCTGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCCNCC*CICCIC Trigger: GCAGATGCAGCAGATGCAGCAGCAGCAGTTACAGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGCTGCTGTAACTGCTaGTGCTGCATCTGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQCCCNC*CCICCI Trigger: GATGCAGCAGATGCAGCAGCAGCAGTTACAGCAGCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGTGGAAGGAGAGGGAGTaGCTGATTTGCTTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQWKERE*LICLLE Trigger: CTCCAGCAAGCAAATCAGCCACTCCCTCTCCTTCCA...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAACTCTGGAGGAGGCGTaGTCGGTGGAATTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSTLEEA*SVEFQT Trigger: AGTTTGAAATTCCACCGATCACGCCTCCTCCAGAGT...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGATTCCTTGAGATTGTaGTGGAAGGGAGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSDSLRL*WKGDPG Trigger: GCCTGGATCTCCCTTCCATCACAATCTCAAGGAATC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCACTCCACCAGATTCCTTaGGATTGTGATGGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSLHQIP*DCDGRE Trigger: CTCCCTTCCATCACAATCTCAAGGAATCTGGTGGAG...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGTTGCGTTGGGGTTTTaGCCCTTAATTGCAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQVALGF*PLIAAC Trigger: ACAGGCTGCAATTAAGGGTCAAAACCCCAACGCAAC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCACCATGTGCAGCCCATTaGTATGAAGCACGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSPCAAH*YEARHL Trigger: AAGATGGCGTGCTTCATAGCAATGGGCTGCACATGG...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAAGGCTGGCTGGGGGCTaGCAATGGCGGGGATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTERLAGG*QWRGWG Trigger: CCCCCATCCCCGCCATTGGCAGCCCCCAGCCAGCCT...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGACAGAACGGATGGTCTaGGCTTCTGCAGATTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQTERMV*ASADSA Trigger: TGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGCAGCCTGTGTATCTCTaGAAAACAGGGCATATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQQPVYL*KTGHML Trigger: CAGCATATGCCCTGTTTTTCAGAGATACACAGGCTG...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGAGGAGGCGTGATCGGTaGAATTTCAAACTCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQRRRDR*NFKLFV Trigger: GACGAAGAGTTTGAAATTCCACCGATCACGCCTCCT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGATGTGTGGGACACATTaGCTCCTCCCAAATTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQMCGTH*LLPNSS Trigger: GCTTGAATTTGGGAGGAGCCAATGTGTCCCACACAT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGACTGATGTGACGATCTaGCTCATGGGTAGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQTDVTI*LMGSLM Trigger: CATGAGACTACCCATGAGCCAGATCGTCACATCAGT...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGCTGTCCCACATAGATaGTACGATTTTCGAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSQLASSSPCAFPPTPHSAVPHR*YDFRDF Trigger: GAAGTCTCGAAAATCGTAGCATCTATGTGGGACAGC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCGCAGCTGCTGTTGGCTaGGCTGCTGCTGGAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAAAAVG*AAAGDA Trigger: AGCATCTCCAGCAGCAGCTCAGCCAACAGCAGCTGC...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCCAGGCATACCCAGGGTaGGGTCTGACTCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAQAYPG*GLTLEE Trigger: CTCCTCCAGAGTCAGACCCCACCCTGGGTATGCCTG...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAGCTGGGCAGGAGGCATaGTCCCAGATCGAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEAGQEA*SQIEHH Trigger: ATGGTGCTCGATCTGGGATCATGCCTCCTGCCCAGC...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCAGCTGTGCGCTGAGCTaGGACTGGTTGATGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLASCALS*DWLMVV Trigger: GACCACCATCAACCAGTCTCAGCTCAGCGCACAGCT...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTGGAGATGCTGCTGTTaGTGCTGCTGCAGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAWRCCC*CCCRCC Trigger: GCAGCACCTGCAGCAGCAGCAACAGCAGCATCTCCA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTGCTGCTGGAGATGCTaGTGTTGCTGCTGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLACCWRC*CCCCCR Trigger: CCTGCAGCAGCAGCAACAGCAGCATCTCCAGCAGCA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCAGCTGGAGATGCTGCTaGAACTGCTGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLASWRCC*NCCCSC Trigger: GCAGCTGCAGCAGCAGTTGCAGCAGCATCTCCAGCT...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGGAAGAGTCTGAGGTaGGGCTGGGACTGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEWKSLR*GWDCPM Trigger: CATGGGACAGTCCCAGCCTCACCTCAGACTCTTCCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTGTTGGCTGAGCTGCTaGTGGAGATGCTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLACWLSC*WRCCCC Trigger: GCAACAGCAGCATCTCCAGCAGCAGCTCAGCCAACA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGCTGCTGCAACTGCTaGTGCAGCTGCTGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTECCCNC*CSCCWL Trigger: CAGCCAACAGCAGCTGCAGCAGCAGTTGCAGCAGCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTGGTGCTGCATGTGCTaGAGTTGCTGCAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAWCCMC*SCCSWR Trigger: TCTCCAGCTGCAGCAACTGCAGCACATGCAGCACCA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCCCATGGTCGTCCCCATaGAACTTATCAGTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAPWSSP*NLSVEP Trigger: GGGCTCCACTGATAAGTTCCATGGGGACGACCATGG...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR TCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGCAGCCCATTGCTATaGAGCACGCCATCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTECSPLL*STPSCS Trigger: GGAGCAAGATGGCGTGCTTCATAGCAATGGGCTGCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTTTGCTTGCTGGAGGTaGAGGAGATGTGTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAFACWR*RRCVGH Trigger: GTGTCCCACACATCTCCTTCACCTCCAGCAAGCAAA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCAAACAGGGCATATGCTaGCACTGGCTTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAKQGIC*HWLLRL Trigger: GAGCCTCAGAAGCCAGTGTCAGCATATGCCCTGTTT...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTGCTGCTGGATCTGCTaGTGCATTTGGTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLACCWIC*CIWCCC Trigger: ACAGCAGCACCAAATGCATCAGCAGATCCAGCAGCA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCGGCGTGTGGAATGTCTaGTCACTGGCAGCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAGVWNV*SLAAKK Trigger: CTTCTTTGCTGCCAGTGAGCAGACATTCCACACGCC...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCATTCAAGCCCAGCTGTaGGCTGAGCTGAGACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAIQAQL*AELRLV Trigger: AACCAGTCTCAGCTCAGCGCACAGCTGGGCTTGAAT...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGCTGTTGGCTGAGCTaGTGCTGGAGATGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTECCWLS*CWRCCC Trigger: ACAGCAGCATCTCCAGCAGCAGCTCAGCCAACAGCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAAGATGCTGCTGCAACTaGTGCTGCAGCTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTERCCCN*CCSCCW Trigger: CCAACAGCAGCTGCAGCAGCAGTTGCAGCAGCATCT...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAGGTGAAGGAGATGTGTaGGACACATTGGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEGEGDV*DTLAPP Trigger: GGGAGGAGCCAATGTGTCCCACACATCTCCTTCACC...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCGCTGGACAGAACGGATaGTCTGGGCTTCTGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAAGQNG*SGLLQI Trigger: AATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGC...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATGCAGTTGCTGCAGCTaGAGATGCTGCTGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTECSCCS*RCCCNC Trigger: GCAGTTGCAGCAGCATCTCCAGCTGCAGCAACTGCA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR TCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAACCCATGTTGAGACAGTaGTGTGTTCAGGAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEPMLRQ*CVQEEG Trigger: TCCCTCCTCCTGAACACATCACTGTCTCAACATGGG...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCCATGGAACTTATCAGTaGAGCCCCAATGTTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAHGTYQ*SPNVRG Trigger: CCCTCGAACATTGGGGCTCCACTGATAAGTTCCATG...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAGACTTCTCCGAAGGTTaGGTTGGGGTTTTGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTEDFSEG*VGVLTL Trigger: AAGGGTCAAAACCCCAACGCAACCTTCGGAGAAGTC...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTTATATACCTGCTTTTaGTCCTCCCCAAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLALYTCF*SSPRLS Trigger: GGACAGCCTTGGGGAGGAGCAAAAGCAGGTATATAA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTCATGGGTAGTCTCATaGTTAAGGGTTTGGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLASWVVS*LRVWGQ Trigger: TTGCCCCCAAACCCTTAACCATGAGACTACCCATGA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAACTTCTTGCCAGAATCTaGGGCTGTTCTTTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTELLARI*GCSFLS Trigger: GGAGAGAAAAGAACAGCCCCAGATTCTGGCAAGAAG...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTATTATTTCCCAACTTaGTGTAGCCGTAGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAYYFPT*CSRSTP Trigger: TGGGGTACTACGGCTACAGCAAGTTGGGAAATAATA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAATCCAATGGCTCTGTTTaGATCATCAGCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCPCGCIKIQSTDFTESNGSV*IISILF Trigger: GAAGAGGATGCTGATGATGCAAACAGAGCCATTGGA...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCGTTTTGACCCTTAATTaGAGCCTGTGTATCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAVLTLN*SLCISE Trigger: TTCAGAGATACACAGGCTGCAATTAAGGGTCAAAAC...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR CAA 72 bp | CTACACTGCAGTTCTTATTGCCTATCTAATAGACACTaGAGAGGATCTCTTGATCTGTTACACATTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCSSYCLSNRH*RGSLDLLHILA Trigger: TGCAAGAATGTGTAACAGATCAAGAGATCCTCTCAAGTGTCTATTAGATAGGCAATAAGAACTGCAGTGTAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| 3UTR CAA 72 bp | AGTGGCCATAGATATTGTCACAACATATACCGTGGTTaGATTCGGAGAAGTCATGGATACAAAGTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGHRYCHNIYRG*IRRSHGYKVEV Trigger: TACTTCTACTTTGTATCCATGACTTCTCCGAATCAAACCACGGTATATGTTGTGACAATATCTATGGCCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 90 bp | GACGTGATCTGTGAGGTGACGGGCGAGTGCTGCCGGGGAGAAGGCTaGGACTGGTGCTGCATGTGCTGCAGTTGCTGCAGCTGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DVICEVTGECCRGEG*DWCCMCCSCCSWRC Trigger: GCATCTCCAGCTGCAGCAACTGCAGCACATGCAGCACCAGTCTCAGCCTTCTCCCCGGCAGCACTCGCCCGTCACCTCACAGATCACGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 90 bp | ATGCTGCTGGGTTTGCACCGAAGGGCTCACCTGGGTGGAGGTTGCTaGACCAACCATGGTCGTCCCCATGGAACTTATCAGTGGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLLGLHRRAHLGGGC*TNHGRPHGTYQWSP Trigger: GGGGCTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS TCA 90 bp | TGCTGCATCTGCTGCTGCTGCTGCTGTTGCTGCTGCAACTGCATCTaGTGCTGCTGGGTTTGCACCGAAGGGCTCACCTGGGTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCICCCCCCCCCNCI*CCWVCTEGLTWVEV Trigger: AACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCATCAGATGCAGTTGCAGCAGCAACAGCAGCAGCAGCAGCAGATGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS TCA 90 bp | GTGCATCAGGCATACCCAGGGTGGGGTCTGACTCTGGAGGAGGCGTaGTCGGTGGAATTTCAAACTCTTCGTCCCCAAGGCTTGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHQAYPGWGLTLEEA*SVEFQTLRPQGLAC Trigger: ACACGCCAAGCCTTGGGGACGAAGAGTTTGAAATTCCACCGATCACGCCTCCTCCAGAGTCAGACCCCACCCTGGGTATGCCTGATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS TCA 90 bp | GGTGTGAACTCAGTTCCCTGGGAAGGCAACGGATCGCTGAGAGTCTaGAAGGGTAGCAGTGCATCAGGCATACCCAGGGTGGGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVNSVPWEGNGSLRV*KGSSASGIPRVGSD Trigger: GTCAGACCCCACCCTGGGTATGCCTGATGCACTGCTACCCTTTCAGACTCTCAGCGATCCGTTGCCTTCCCAGGGAACTGAGTTCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
||
| CDS GCA 90 bp | AGATGTGTGGGACACATTGGCTCCTCCCAAATTCAAGCCCAGCTGTaGGCTGAGCTGAGACTGGTTGATGGTGGTCAGCTGGGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCVGHIGSSQIQAQL*AELRLVDGGQLGRR Trigger: CCTCCTGCCCAGCTGACCACCATCAACCAGTCTCAGCTCAGCGCACAGCTGGGCTTGAATTTGGGAGGAGCCAATGTGTCCCACACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
||
| CDS CCA 90 bp | GGCTCACCTGGGTGGAGGTTGCTGAACCAACCATGGTCGTCCCCATaGAACTTATCAGTGGAGCCCCAATGTTCGAGGGCATGTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPGWRLLNQPWSSP*NLSVEPQCSRACWL Trigger: CAGCCAACATGCCCTCGAACATTGGGGCTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGATTCAGCAGCAGCCTaGGAAACGAGGCTAGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQDSAAA*ETRLAR Trigger: CCGGGCTAGCCTCGTTTCCAAGGCTGCTGCTGAATC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CCA 90 bp | GTCAGGTTGGTTGATGCCAGAGTCTGCTGGACAGAACGGATGGTCTaGGCTTCTGCAGATTCAGCAGCAGCCTTGGAAACGAGGCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRLVDARVCWTERMV*ASADSAAALETRLA Trigger: GGCTAGCCTCGTTTCCAAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 90 bp | TTCAGGAGGAGGGAGGATGTCAGGTTGGTTGATGCCAGAGTCTGCTaGACAGAACGGATGGTCTGGGCTTCTGCAGATTCAGCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRRREDVRLVDARVC*TERMVWASADSAAA Trigger: GGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCTCCCTCCTCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 90 bp | TTTGCACCGAAGGGCTCACCTGGGTGGAGGTTGCTGAACCAACCATaGTCGTCCCCATGGAACTTATCAGTGGAGCCCCAATGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FAPKGSPGWRLLNQP*SSPWNLSVEPQCSR Trigger: CCTCGAACATTGGGGCTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CAA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGCTTCGTCCCCAAGGCTaGGCGTGTGGAATGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQLRPQG*ACGMSA Trigger: AGCAGACATTCCACACGCCAAGCCTTGGGGACGAAG...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS GCA 90 bp | GTGTTCAGGAGGAGGGAGGATGTCAGGTTGGTTGATGCCAGAGTCTaGTGGACAGAACGGATGGTCTGGGCTTCTGCAGATTCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFRRREDVRLVDARV*WTERMVWASADSAA Trigger: TGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCTCCCTCCTCCTGAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 90 bp | AGGATGTCAGGTTGGTTGATGCCAGAGTCTGCTGGACAGAACGGATaGTCTGGGCTTCTGCAGATTCAGCAGCAGCCTTGGAAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RMSGWLMPESAGQNG*SGLLQIQQQPWKRG Trigger: GCCTCGTTTCCAAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 90 bp | ACTGCATCTGATGCTGCTGGGTTTGCACCGAAGGGCTCACCTGGGTaGAGGTTGCTGAACCAACCATGGTCGTCCCCATGGAACTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TASDAAGFAPKGSPG*RLLNQPWSSPWNLS Trigger: TGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCATCAGATGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGGAGTCTTGGGCTTCTaGCCAGAATCTGGGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RVNLQVPVHAPSLLRLTQGVLGF*PESGAV Trigger: AACAGCCCCAGATTCTGGCAAGAAGCCCAAGACTCC...CTGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 90 bp | AGCTGGGCAGGAGGCATGATCCCAGATCGAGCACCATCCGTCATATaGACAATTGACCTCATGACCAAAGAGGGATCCTGGCGGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWAGGMIPDRAPSVI*TIDLMTKEGSWRYC Trigger: ACAGTACCGCCAGGATCCCTCTTTGGTCATGAGGTCAATTGTCCATATGACGGATGGTGCTCGATCTGGGATCATGCCTCCTGCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGGTTGCGTTGGGGTTTaGACCCTTAATTGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSQLASSSPCAFPPTPHSGCVGV*TLNCSL Trigger: CAGGCTGCAATTAAGGGTCAAAACCCCAACGCAACC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CCA 90 bp | CAAACTCTTCGTCCCCAAGGCTTGGCGTGTGGAATGTCTGCTCACTaGCAGCAAAGAAGGCGTTGTTTGCCTCGGCCATGTTCATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTLRPQGLACGMSAH*QQRRRCLPRPCSCS Trigger: ACTACATGAACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGCAGACATTCCACACGCCAAGCCTTGGGGACGAAGAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CCA 90 bp | CATGTTGAGACAGTGATGTGTTCAGGAGGAGGGAGGATGTCAGGTTaGTTGATGCCAGAGTCTGCTGGACAGAACGGATGGTCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVETVMCSGGGRMSG*LMPESAGQNGWSGL Trigger: AAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCTCCCTCCTCCTGAACACATCACTGTCTCAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAGATGTGTGGGACACATaGGCTCCTCCCAAATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSQLASSSPCAFPPTPHSDVWDT*APPKFK Trigger: CTTGAATTTGGGAGGAGCCAATGTGTCCCACACATC...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCAACTTGCAAGTTCCAGTCCATGCGCCTTCCCTCCTACGCCTCACTCAATGTTCGAGGGCATGTaGGCTGCAATGGTGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSQLASSSPCAFPPTPHSMFEGM*AAMVTD Trigger: ATCAGTCACCATTGCAGCCAACATGCCCTCGAACAT...TGAGTGAGGCGTAGGAGGGAAGGCGCATGGACTGGAACTTGCAAGTTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS TCA 90 bp | CAGCCCATTGCTATGAAGCACGCCATCTTGCTCCACCAGATTCCTTaGGATTGTGATGGAAGGGAGATCCAGGCTTTGAGGGGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QPIAMKHAILLHQIP*DCDGREIQALRGKL Trigger: CAGTTTCCCCCTCAAAGCCTGGATCTCCCTTCCATCACAATCTCAAGGAATCTGGTGGAGCAAGATGGCGTGCTTCATAGCAATGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS-3UTR CAA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTCACCTGGGTGGAGGTaGCTGAACCAACCATGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPGFIKRVDSHIVGLASPGWR*LNQPWS Trigger: CGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAACTGCATGTGCTGCAGTaGCTGCAGCTGGAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQCPCGCIKIQSTDFTELHVLQ*LQLEML Trigger: CAGCATCTCCAGCTGCAGCAACTGCAGCACATGCAG...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CAA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCGAGTGGCTGATTTGCTaGCTGGAGGTGAAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAEWLIC*LEVKEM Trigger: CATCTCCTTCACCTCCAGCAAGCAAATCAGCCACTC...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS-3UTR CAA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCCTCATGGTTAAGGGTTaGGGGGCAATTGACCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPGFIKRVDSHIVGLALMVKG*GAIDLG Trigger: CCCTAGGTCAATTGCCCCCAAACCCTTAACCATGAG...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CAA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAAGTCTGCGACTGGATTaGAGGCTGGTGCTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEQCPCGCIKIQSTDFTESLRLD*RLVLLR Trigger: TCTCAGCAGCACCAGCCTCAAATCCAGTCGCAGACT...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CAA 90 bp | AGTGAACAGTGTCCTTGCGGTTGCATCAAAATACAGTCCACAGATTTTACTGAAAGGATGTCAGGTTGGTaGATGCCAGAGTCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEQCPCGCIKIQSTDFTERMSGW*MPESAG Trigger: TCCAGCAGACTCTGGCATCAACCAACCTGACATCCT...TTCAGTAAAATCTGTGGACTGTATTTTGATGCAACCGCAAGGACACTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS-3UTR CAA 90 bp | CAGCATGTCCCAGGATTCATTAAACGGGTTGATTCACATATTGTAGGTTTAGCCTTTATATACCTGCTTTaGCTCCTCCCCAAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHVPGFIKRVDSHIVGLAFIYLL*LLPKAV Trigger: GACAGCCTTGGGGAGGAGCAAAAGCAGGTATATAAA...GGCTAAACCTACAATATGTGAATCAACCCGTTTAATGAATCCTGGGACATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 72 bp | TGTGAGGTGACGGGCGAGTGCTGCCGGGGAGAAGGCTaGGACTGGTGCTGCATGTGCTGCAGTTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CEVTGECCRGEG*DWCCMCCSCCS Trigger: GCTGCAGCAACTGCAGCACATGCAGCACCAGTCTCAGCCTTCTCCCCGGCAGCACTCGCCCGTCACCTCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | GATGCTGCTGGGTTTGCACCGAAGGGCTCACCTGGGTaGAGGTTGCTGAACCAACCATGGTCGTCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: DAAGFAPKGSPG*RLLNQPWSSPW Trigger: CCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 72 bp | TGCTGCTGCTGCTGCTGTTGCTGCTGCAACTGCATCTaGTGCTGCTGGGTTTGCACCGAAGGGCTCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCCNCI*CCWVCTEGLTW Trigger: CCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCATCAGATGCAGTTGCAGCAGCAACAGCAGCAGCAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 72 bp | GCATACCCAGGGTGGGGTCTGACTCTGGAGGAGGCGTaGTCGGTGGAATTTCAAACTCTTCGTCCCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AYPGWGLTLEEA*SVEFQTLRPQG Trigger: GCCTTGGGGACGAAGAGTTTGAAATTCCACCGATCACGCCTCCTCCAGAGTCAGACCCCACCCTGGGTATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS CCA 72 bp | CGTCCCCAAGGCTTGGCGTGTGGAATGTCTGCTCACTaGCAGCAAAGAAGGCGTTGTTTGCCTCGGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RPQGLACGMSAH*QQRRRCLPRPC Trigger: ACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGCAGACATTCCACACGCCAAGCCTTGGGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CAA 72 bp | GCTGGGTTTGCACCGAAGGGCTCACCTGGGTGGAGGTaGCTGAACCAACCATGGTCGTCCCCATGGAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: AGFAPKGSPGWR*LNQPWSSPWNL Trigger: TAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CAA 90 bp | TCTGATGCTGCTGGGTTTGCACCGAAGGGCTCACCTGGGTGGAGGTaGCTGAACCAACCATGGTCGTCCCCATGGAACTTATCAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SDAAGFAPKGSPGWR*LNQPWSSPWNLSVE Trigger: CTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACCCAGCAGCATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS TCA 72 bp | TCAGTTCCCTGGGAAGGCAACGGATCGCTGAGAGTCTaGAAGGGTAGCAGTGCATCAGGCATACCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVPWEGNGSLRV*KGSSASGIPRV Trigger: CACCCTGGGTATGCCTGATGCACTGCTACCCTTTCAGACTCTCAGCGATCCGTTGCCTTCCCAGGGAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS TCA 72 bp | GGTTTGCACCGAAGGGCTCACCTGGGTGGAGGTTGCTaGACCAACCATGGTCGTCCCCATGGAACTTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLHRRAHLGGGC*TNHGRPHGTYQ Trigger: CTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTTCGGTGCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS GCA 72 bp | CAGAGTCTGCTGGACAGAACGGATGGTCTGGGCTTCTaGAGATTCAGCAGCAGCCTTGGAAACGAGGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLLDRTDGLGF*RFSSSLGNEAS Trigger: GCTAGCCTCGTTTCCAAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | GGTTGGTTGATGCCAGAGTCTGCTGGACAGAACGGATaGTCTGGGCTTCTGCAGATTCAGCAGCAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWLMPESAGQNG*SGLLQIQQQPW Trigger: CCAAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | GGGTGGAGGTTGCTGAACCAACCATGGTCGTCCCCATaGAACTTATCAGTGGAGCCCCAATGTTCGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWRLLNQPWSSP*NLSVEPQCSRA Trigger: TGCCCTCGAACATTGGGGCTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | AAGGGCTCACCTGGGTGGAGGTTGCTGAACCAACCATaGTCGTCCCCATGGAACTTATCAGTGGAGCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KGSPGWRLLNQP*SSPWNLSVEPQ Trigger: TTGGGGCTCCACTGATAAGTTCCATGGGGACGACCATGGTTGGTTCAGCAACCTCCACCCAGGTGAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | CTTCGTCCCCAAGGCTTGGCGTGTGGAATGTCTCACTaGCAGCAAAGAAGGCGTTGTTTGCCTCGGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LRPQGLACGMSH*QQRRRCLPRPC Trigger: ACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGACATTCCACACGCCAAGCCTTGGGGACGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176616.8 |
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| CDS GCA 72 bp | AGGAGGGAGGATGTCAGGTTGGTTGATGCCAGAGTCTaGTGGACAGAACGGATGGTCTGGGCTTCTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RREDVRLVDARV*WTERMVWASAD Trigger: ATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCTCCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CCA 72 bp | GTTGATGCCAGAGTCTGCTGGACAGAACGGATGGTCTaGGCTTCTGCAGATTCAGCAGCAGCCTTGGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: VDARVCWTERMV*ASADSAAALET Trigger: CGTTTCCAAGGCTGCTGCTGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CCA 72 bp | AGGGAGGATGTCAGGTTGGTTGATGCCAGAGTCTGCTaGACAGAACGGATGGTCTGGGCTTCTGCAGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: REDVRLVDARVC*TERMVWASADS Trigger: TGAATCTGCAGAAGCCCAGACCATCCGTTCTGTCCAGCAGACTCTGGCATCAACCAACCTGACATCCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS CAA 90 bp | GCATCCTCTTCGTTGATAGAGCTGGAAGGAGAGGGAGTGGCTGATTaGCTTGCTGGAGGTGAAGGAGATGTGTGGGACACATTGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSLIELEGEGVAD*LAGGEGDVWDTLAP Trigger: AGGAGCCAATGTGTCCCACACATCTCCTTCACCTCCAGCAAGCAAATCAGCCACTCCCTCTCCTTCCAGCTCTATCAACGAAGAGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109621.10 ENSMUST00000176616.8 |
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| CDS CAA 90 bp | GTCCCCATGGAACTTATCAGTGGAGCCCCAATGTTCGAGGGCATGTaGGCTGCAATGGTGACTGATGTGACGATCTGGCTCATGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPMELISGAPMFEGM*AAMVTDVTIWLMGS Trigger: ACTACCCATGAGCCAGATCGTCACATCAGTCACCATTGCAGCCAACATGCCCTCGAACATTGGGGCTCCACTGATAAGTTCCATGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS TCA 72 bp | GCACGCCATCTTGCTCCACCAGATTCCTTGAGATTGTaGTGGAAGGGAGATCCAGGCTTTGAGGGGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: ARHLAPPDSLRL*WKGDPGFEGET Trigger: AGTTTCCCCCTCAAAGCCTGGATCTCCCTTCCATCACAATCTCAAGGAATCTGGTGGAGCAAGATGGCGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
||
| CDS GCA 72 bp | ACACTTGTGTGTGGCTCTGATCCATGTGCAGCCCATTaGTATGAAGCACGCCATCTTGCTCCACCAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLVCGSDPCAAH*YEARHLAPPDS Trigger: GGAATCTGGTGGAGCAAGATGGCGTGCTTCATAGCAATGGGCTGCACATGGATCAGAGCCACACACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
||
| CDS CCA 72 bp | GGAATTTCAAACTCTTCGTCCCCAAGGCTTGGCGTGTaGAATGTCTGCTCACTGGCAGCAAAGAAGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GISNSSSPRLGV*NVCSLAAKKAL Trigger: CAACGCCTTCTTTGCTGCCAGTGAGCAGACATTCCACACGCCAAGCCTTGGGGACGAAGAGTTTGAAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CCA 72 bp | GGAGGCATGATCCCAGATCGAGCACCATCCGTCATATaGACAATTGACCTCATGACCAAAGAGGGATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGMIPDRAPSVI*TIDLMTKEGSW Trigger: CCAGGATCCCTCTTTGGTCATGAGGTCAATTGTCCATATGACGGATGGTGCTCGATCTGGGATCATGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
||
| CDS CAA 72 bp | GAACTTATCAGTGGAGCCCCAATGTTCGAGGGCATGTaGGCTGCAATGGTGACTGATGTGACGATCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELISGAPMFEGM*AAMVTDVTIWL Trigger: GAGCCAGATCGTCACATCAGTCACCATTGCAGCCAACATGCCCTCGAACATTGGGGCTCCACTGATAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS CAA 72 bp | ACGATCTGGCTCATGGGTAGTCTCATGGTTAAGGGTTaGGGGGCAATTGACCTAGGGAGTGACTGTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TIWLMGSLMVKG*GAIDLGSDCGR Trigger: TCTTCCACAGTCACTCCCTAGGTCAATTGCCCCCAAACCCTTAACCATGAGACTACCCATGAGCCAGATCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
||
| CDS TCA 72 bp | ATCGAGCACCATCCGTCATATGGACAATTGACCTCATaGCCAAAGAGGGATCCTGGCGGTACTGTGACACTT | + |
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Preference number: 6 (lower is better) Translates to: IEHHPSYGQLTS*PKRDPGGTVTL Trigger: AAGTGTCACAGTACCGCCAGGATCCCTCTTTGGTCATGAGGTCAATTGTCCATATGACGGATGGTGCTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109621.10 ENSMUST00000176034.2 ENSMUST00000176616.8 |
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| CDS CCA 72 bp | GGAATTTCAAACTCTTCGTCCCCAAGGCTTGGCGTGTaGAATGTCTCACTGGCAGCAAAGAAGGCGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GISNSSSPRLGV*NVSLAAKKALF Trigger: AAACAACGCCTTCTTTGCTGCCAGTGAGACATTCCACACGCCAAGCCTTGGGGACGAAGAGTTTGAAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176616.8 |
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| CDS CAA 72 bp | GGAATGTCTGCTCACTGGCAGCAAAGAAGGCGTTGTTaGCCTCGGCCATGTTCATGTAGTTATTATTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GMSAHWQQRRRC*PRPCSCSYYFP Trigger: TGGGAAATAATAACTACATGAACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGCAGACATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS GCA 72 bp | GAATGTCTGCTCACTGGCAGCAAAGAAGGCGTTGTTTaGCTCGGCCATGTTCATGTAGTTATTATTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: ECLLTGSKEGVV*LGHVHVVIISQ Trigger: TTGGGAAATAATAACTACATGAACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGCAGACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109621.10 |
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| CDS GCA 72 bp | GTGGAATGTCTCACTGGCAGCAAAGAAGGCGTTGTTTaGCTCGGCCATGTTCATGTAGTTATTATTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: VECLTGSKEGVV*LGHVHVVIISQ Trigger: TTGGGAAATAATAACTACATGAACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGACATTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176616.8 |
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| CDS CAA 72 bp | TGTGGAATGTCTCACTGGCAGCAAAGAAGGCGTTGTTaGCCTCGGCCATGTTCATGTAGTTATTATTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: CGMSHWQQRRRC*PRPCSCSYYFP Trigger: TGGGAAATAATAACTACATGAACATGGCCGAGGCAAACAACGCCTTCTTTGCTGCCAGTGAGACATTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176616.8 |
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