Pregenerated sensors for TOR2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009563Ensembl transcript IDs: ENSMUST00000009707.14, ENSMUST00000140999.2, ENSMUST00000156617.8, ENSMUST00000175763.8, ENSMUST00000177382.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCGGGAGGAAGGGCACCACAGCGTCCAGCAGGTGCTCCTCCATaGTGCCAGACCGCCAGAAGCCATGTTGAGGGTTGTCCATCACAG | + |
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Preference number: 1 (lower is better) Translates to: GAGGRAPQRPAGAPP*CQTARSHVEGCPSQ Trigger: CTGTGATGGACAACCCTCAACATGGCTTCTGGCGGTCTGGCATCATGGAGGAGCACCTGCTGGACGCTGTGGTGCCCTTCCTCCCGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR GCA 90 bp | AGCCATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTaGTGTCCAGCACCGCCTGAACCACCTCCTCGCTGGGCTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SHWRRRAVLPQGSRW*CPAPPEPPPRWAPG Trigger: GCCTGGAGCCCAGCGAGGAGGTGGTTCAGGCGGTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAATGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR TCA 90 bp | GCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGTCCCTaGGTTGCCGTTCACATTGAGAAGGCTCAGGCTCAGACTGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ASKSPQLEAARSLRP*VAVHIEKAQAQTAG Trigger: CCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTGAACGGCAACTCAGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR TCA 90 bp | TGTCCATCACAGCTCGGGAGATTACTGGCTCCACCTCCTGTAGGCTaGTTTCTTCCCTGTCCCTGTGGCTGCGCCAGGCCTCCAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: CPSQLGRLLAPPPVG*FLPCPCGCARPPRP Trigger: TGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGTAATCTCCCGAGCTGTGATGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | CCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTGAGGTCTaGGAAAGGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PSWIAGSSHSLWAEV*ERSQTRHASKSPQL Trigger: CAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCCTTTCCCAGACCTCAGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | GTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTaGGCTGAGGTCTGGGAAAGGAGCCAGACAAGGCATGCCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: VLAWPSWIAGSSHSL*AEVWERSQTRHASK Trigger: CTTACTGGCATGCCTTGTCTGGCTCCTTTCCCAGACCTCAGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | TGCAGCCATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTaGTGCTGTCCAGCACCGCCTGAACCACCTCCTCGCTGGGCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: CSHWRRRAVLPQGSR*CCPAPPEPPPRWAP Trigger: TGGAGCCCAGCGAGGAGGTGGTTCAGGCGGTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAATGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | ATTACTGGCTCCACCTCCTGTAGGCTGATTTCTTCCCTGTCCCTGTaGCTGCGCCAGGCCTCCAAGGCCACCTGGTTGATCTGCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: ITGSTSCRLISSLSL*LRQASKATWLICSP Trigger: TGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR TCA 90 bp | GCAGAGGAGGCAGCGATGCCACCTGGGCTTCTCAGAGGAAAAATGTaGGTCGGGAGGCCACTGTCTTGCAGCCATTGGAGGAGAAGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: AEEAAMPPGLLRGKM*VGRPLSCSHWRRRA Trigger: AGCTCTTCTCCTCCAATGGCTGCAAGACAGTGGCCTCCCGACTCACATTTTTCCTCTGAGAAGCCCAGGTGGCATCGCTGCCTCCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR TCA 90 bp | TCATCGAAGAGGAAAAGGGATCGGCCACAGGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCCTTCTTGTACTGCTCAGTGCGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SSKRKRDRPQAVRFP*TQLLSSFLYCSVRL Trigger: CAGCCGCACTGAGCAGTACAAGAAGGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGCCTGTGGCCGATCCCTTTTCCTCTTCGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| 3UTR CCA 90 bp | ATTTCTTCCCTGTCCCTGTGGCTGCGCCAGGCCTCCAAGGCCACCTaGTTGATCTGCTCACCACCAGCATTGCTGATAAAGATGAAGATG | + |
|
Preference number: 1 (lower is better) Translates to: ISSLSLWLRQASKAT*LICSPPALLIKMKM Trigger: CATCTTCATCTTTATCAGCAATGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAGGGAAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | TTCCTTGGCCTGGCCAACACCTTTCTTCATCTTAACATTGTGCTCTaGGTCCCACTTGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: FLGLANTFLHLNIVL*VPLANQLRKDFFQE Trigger: CTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR GCA 90 bp | CTTTCTTCCTTGGCCTGGCCAACACCTTTCTTCATCTTAACATTGTaGTCTGGGTCCCACTTGCCAACCAGCTTAGGAAAGATTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LSSLAWPTPFFILTL*SGSHLPTSLGKISS Trigger: GGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CCA 90 bp | AGGAGTTTCTTAGCAAAGATGCTTCTAGACCTTTCTTCCTTGGCCTaGCCAACACCTTTCTTCATCTTAACATTGTGCTCTGGGTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RSFLAKMLLDLSSLA*PTPFFILTLCSGSH Trigger: GTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAGGTCTAGAAGCATCTTTGCTAAGAAACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | TACGCAGTGGCGCACGTGATGCCGCTGGAGCGGGAGGAAGGGCACCACAGCGTCCTGTGGGCTGAGGTCTaGGAAAGGAGCCAGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YAVAHVMPLEREEGHHSVLWAEV*ERSQTR Trigger: CCTTGTCTGGCTCCTTTCCCAGACCTCAGCCCACAG...GACGCTGTGGTGCCCTTCCTCCCGCTCCAGCGGCATCACGTGCGCCACTGCGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGCCCAACTGAGCCAGCTCATTGAGTACGCAGTGGCGCACGTGATGCCGCAGACTGCAGGGCAATaGCACGGCTGTGAGGTTGCG | + |
|
Preference number: 2 (lower is better) Translates to: LQAQLSQLIEYAVAHVMPQTAGQ*HGCEVA Trigger: CGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTG...CGGCATCACGTGCGCCACTGCGTACTCAATGAGCTGGCTCAGTTGGGCCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | GGGCCCAGGAAGGGCTGCAGGACTTCCATCAGGCCAGGAGGCAGCTaGTCCATCTCATCGAAGAGGAAAAGGGATCGGCCACAGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GPRKGCRTSIRPGGS*SISSKRKRDRPQAV Trigger: CACTGCCTGTGGCCGATCCCTTTTCCTCTTCGATGAGATGGACAAGCTGCCTCCTGGCCTGATGGAAGTCCTGCAGCCCTTCCTGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCCTTTCGTGTTTGCTCTaGCCAGGCAGAGGAGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GARQGMPVRVPSWKQPGALSCLL*PGRGGS Trigger: GCTGCCTCCTCTGCCTGGTCAGAGCAAACACGAAAG...GGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | AGCTGGAAGCAGCCAGGAGCCTTCGTCCCTGAGTTGCCGTTCACATaGAGAAGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SWKQPGAFVPELPFT*RRLRLRLQGNGTAV Trigger: CACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTGAACGGCAACTCAGGGACGAAGGCTCCTGGCTGCTTCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | GTACGCAGTGGCGCACGTGATGCCGCTGGAGCGGGAGGAAGGGCACCACAGCGTTTGAGTCCTTCCATTTaGGGAACCTGTGAGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VRSGARDAAGAGGRAPQRLSPSI*GTCEVL Trigger: TAGCACCTCACAGGTTCCCCAAATGGAAGGACTCAA...ACGCTGTGGTGCCCTTCCTCCCGCTCCAGCGGCATCACGTGCGCCACTGCGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | GTCCAGCAGGTGCTCCTCCATGATGCCAGACCGCCAGAAGCCATGTaGAGGGTTGTCCATCACAGCTCGGGAGATTACTGGCTCCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: VQQVLLHDARPPEAM*RVVHHSSGDYWLHL Trigger: GAGGTGGAGCCAGTAATCTCCCGAGCTGTGATGGACAACCCTCAACATGGCTTCTGGCGGTCTGGCATCATGGAGGAGCACCTGCTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAGCCAGCTCATTGAGTACGCAGTGGCGCACGTGATGCCGCTGGAGCGGAGTGCGGCTGGGATGTaGGAAATGGATGATAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QLSQLIEYAVAHVMPLERSAAGM*EMDDRG Trigger: TCCCCTATCATCCATTTCCCACATCCCAGCCGCACT...CCGCTCCAGCGGCATCACGTGCGCCACTGCGTACTCAATGAGCTGGCTCAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| 3UTR CAA 90 bp | GTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGTCCCTGAGTaGCCGTTCACATTGAGAAGGCTCAGGCTCAGACTGCAGGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VRVPSWKQPGAFVPE*PFTLRRLRLRLQGN Trigger: ATTGCCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTGAACGGCAACTCAGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCAGCACCGCTTTCGTGTTTGCTCTaGCCAGGCAGAGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WRRRAVLPQGSRWCCPAPLSCLL*PGRGGS Trigger: GCTGCCTCCTCTGCCTGGTCAGAGCAAACACGAAAG...CGGTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCATGATGCCAGACCGCCAGAAGCCATGTTGAGGGTTGTCCATCACAGCGTAAGAGTCCCCAGCTaGAAGCAGCCAGGAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLHDARPPEAMLRVVHHSVRVPS*KQPGAF Trigger: GAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTAC...GCTGTGATGGACAACCCTCAACATGGCTTCTGGCGGTCTGGCATCATGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | TCTTCCCTGTCCCTGTGGCTGCGCCAGGCCTCCAAGGCCACCTGGTaGATCTGCTCACCACCAGCATTGCTGATAAAGATGAAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLSLWLRQASKATW*ICSPPALLIKMKMA Trigger: AGCCATCTTCATCTTTATCAGCAATGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | AGAAGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTaGCGGGGTACCCAGGAGTTTCTTAGCAAAGATGCTTCTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: RRLRLRLQGNGTAVR*RGTQEFLSKDASRP Trigger: AGGTCTAGAAGCATCTTTGCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTGAGTTCATCTTAACATTGTaGTCTGGGTCCCACTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLAWPSWIAGSSHSLWAEFILTL*SGSHLP Trigger: TGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAA...CTCAGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGTAGTAGCTTGAGTCCTTCCATTTGGGGAACCTGTGAGGTGCTAGCCTGGCTGTGGGCTGAGGTCTaGGAAAGGAGCCAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: PCSSLSPSIWGTCEVLAWLWAEV*ERSQTR Trigger: CCTTGTCTGGCTCCTTTCCCAGACCTCAGCCCACAG...CCAGGCTAGCACCTCACAGGTTCCCCAAATGGAAGGACTCAAGCTACTACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCACCACCTCCTGTAGGCTaGTTTCTTCCCTGTCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHWRRRAVLPQGSRWCCPPPPVG*FLPCPC Trigger: ACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGG...TGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCGGGAGATTACTGGCTCCACCTCCTGTAGGCTGATTTCTTCCCTGTCCCTGTCTTGTACTGCTCAGTaGGGCTGGGATGTGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: AREITGSTSCRLISSLSLSCTAQ*GWDVGN Trigger: ATTTCCCACATCCCAGCCGCACTGAGCAGTACAAGA...CAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGTAATCTCCCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCCATGTAGTAGCTTGAGTCCTTCCATTTGGGGAACCTGTGAGGTGCTATCCAGCCACAGTCTGTaGGCTGAGGTCTGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGPCSSLSPSIWGTCEVLSSHSL*AEVWER Trigger: CCTTTCCCAGACCTCAGCCCACAGACTGTGGCTGGA...TAGCACCTCACAGGTTCCCCAAATGGAAGGACTCAAGCTACTACATGGGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | TGGCCAACACCTTTCTTCATCTTAACATTGTGCTCTGGGTCCCACTaGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGCCACCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WPTPFFILTLCSGSH*PTSLGKISSRSHPG Trigger: GCCTGGGTGGCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGTCTTGCAGCCATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGCTTTCTTCCTTGGCCTaGCCAACACCTTTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PLSCSHWRRRAVLPQGSRLSSLA*PTPFFI Trigger: GATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAG...CCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAATGGCTGCAAGACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCATTCATCTTAACATTGTaGTCTGGGTCCCACTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SHWRRRAVLPQGSRWCCPFILTL*SGSHLP Trigger: TGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAA...TGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR CAA 90 bp | GTACCCAGGAGTTTCTTAGCAAAGATGCTTCTAGACCTTTCTTCCTaGGCCTGGCCAACACCTTTCTTCATCTTAACATTGTGCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VPRSFLAKMLLDLSS*AWPTPFFILTLCSG Trigger: CCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAGGTCTAGAAGCATCTTTGCTAAGAAACTCCTGGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR-3UTR CAA 90 bp | GTACGCAGTGGCGCACGTGATGCCGCTGGAGCGGGAGGAAGGGCACCACAGCGTCCTGGCCTAGCTGGATaGCTGGGTCCAGCCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: VRSGARDAAGAGGRAPQRPGLAG*LGPATV Trigger: GACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGG...ACGCTGTGGTGCCCTTCCTCCCGCTCCAGCGGCATCACGTGCGCCACTGCGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR TCA 72 bp | CCTCGCTGGGCTCCAGGCCCAACTGAGCCAGCTCATTaGGTACGCAGTGGCGCACGTGATGCCGCTGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: PRWAPGPTEPAH*VRSGARDAAGA Trigger: CGCTCCAGCGGCATCACGTGCGCCACTGCGTACTCAATGAGCTGGCTCAGTTGGGCCTGGAGCCCAGCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR GCA 72 bp | TGGAGCGGGAGGAAGGGCACCACAGCGTCCAGCAGGTaGTCCTCCATGATGCCAGACCGCCAGAAGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: WSGRKGTTASSR*SSMMPDRQKPC Trigger: ACATGGCTTCTGGCGGTCTGGCATCATGGAGGAGCACCTGCTGGACGCTGTGGTGCCCTTCCTCCCGCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCGGCACGGCTGTGAGGTaGCGGGGTACCCAGGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: GARQGMPVRVPSWKQPGAGTAVR*RGTQEF Trigger: AAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCC...GGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR CCA 72 bp | GGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTaGAAGCAGCCAGGAGCCTTCGTCCCTGAGTTGCCG | + |
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Preference number: 3 (lower is better) Translates to: GARQGMPVRVPS*KQPGAFVPELP Trigger: CGGCAACTCAGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR TCA 72 bp | CAGCTCGGGAGATTACTGGCTCCACCTCCTGTAGGCTaGTTTCTTCCCTGTCCCTGTGGCTGCGCCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: QLGRLLAPPPVG*FLPCPCGCARP Trigger: AGGCCTGGCGCAGCCACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGTAATCTCCCGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR TCA 72 bp | GGAAGGGCACCACAGCGTCCAGCAGGTGCTCCTCCATaGTGCCAGACCGCCAGAAGCCATGTTGAGGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GRAPQRPAGAPP*CQTARSHVEGC Trigger: ACAACCCTCAACATGGCTTCTGGCGGTCTGGCATCATGGAGGAGCACCTGCTGGACGCTGTGGTGCCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR CCA 72 bp | TCCACCTCCTGTAGGCTGATTTCTTCCCTGTCCCTGTaGCTGCGCCAGGCCTCCAAGGCCACCTGGTTGATC | + |
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Preference number: 3 (lower is better) Translates to: STSCRLISSLSL*LRQASKATWLI Trigger: GATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
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| 3UTR TCA 72 bp | GGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTaGGGTTGCGGGGTACCCAGGAGTTTCTTAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GSGSDCRAMARL*GCGVPRSFLAK Trigger: CTTTGCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| 3UTR TCA 72 bp | AGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGTCCCTaGGTTGCCGTTCACATTGAGAAGGCTCAGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPQLEAARSLRP*VAVHIEKAQAQ Trigger: CTGAGCCTGAGCCTTCTCAATGTGAACGGCAACTCAGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR GCA 72 bp | AGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTaGTGTCCAGCACCGCCTGAACCACCTCCTCGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRRAVLPQGSRW*CPAPPEPPPRW Trigger: CCAGCGAGGAGGTGGTTCAGGCGGTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | CACATTGAGAAGGCTCAGGCTCAGACTGCAGGGCAATaGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HIEKAQAQTAGQ*HGCEVAGYPGV Trigger: AACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | CTGTCCCTGTGGCTGCGCCAGGCCTCCAAGGCCACCTaGTTGATCTGCTCACCACCAGCATTGCTGATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLWLRQASKAT*LICSPPALLIK Trigger: CTTTATCAGCAATGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | TGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTaGTGCTGTCCAGCACCGCCTGAACCACCTCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: WRRRAVLPQGSR*CCPAPPEPPPR Trigger: GCGAGGAGGTGGTTCAGGCGGTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGTCCCTTGCTCTGGGTCCCACTaGCCAACCAGCTTAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGMPVRVPSWKQPGAFVPCSGSH*PTSLGK Trigger: CTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCA...AGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTTTGGCCCATGTAGTAGCTaGAGTCCTTCCATTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LRLQGNGTAVRLRGTQEFGPCSS*SPSIWG Trigger: TCCCCAAATGGAAGGACTCAAGCTACTACATGGGCC...AAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR TCA 72 bp | AGCCAGGAGCCTTCGTCCCTGAGTTGCCGTTCACATTaGGAAGGCTCAGGCTCAGACTGCAGGGCAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQEPSSLSCRSH*EGSGSDCRAMA Trigger: TGCCATTGCCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTGAACGGCAACTCAGGGACGAAGGCTCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR GCA 72 bp | AGATTTCTTCCAGGAGCCACCCAGGCCTTTCGTGTTTaGTCTGACCAGGCAGAGGAGGCAGCGATGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RFLPGATQAFRV*SDQAEEAAMPP Trigger: AGGTGGCATCGCTGCCTCCTCTGCCTGGTCAGAGCAAACACGAAAGGCCTGGGTGGCTCCTGGAAGAAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | AGTCCTTCCATTTGGGGAACCTGTGAGGTGCTAGCCTaGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSIWGTCEVLA*PSWIAGSSHSL Trigger: CAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCACCTCACAGGTTCCCCAAATGGAAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGCTCCAGGCCCAACTGAGCCAGCTCATTGAGTACGCAGTGGCGCACGTGTTCTTCATCTTAACATaGTGCTCTGGGTCCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLQAQLSQLIEYAVAHVFFILT*CSGSHL Trigger: CAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAA...CACGTGCGCCACTGCGTACTCAATGAGCTGGCTCAGTTGGGCCTGGAGCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | ATTGCTGGGTCCAGCCACAGTCTGTGGGCTGAGGTCTaGGAAAGGAGCCAGACAAGGCATGCCAGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: IAGSSHSLWAEV*ERSQTRHASKS Trigger: ACTCTTACTGGCATGCCTTGTCTGGCTCCTTTCCCAGACCTCAGCCCACAGACTGTGGCTGGACCCAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCAGCACTCCAAGGCCACCTGGTaGATCTGCTCACCACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IGGEELFYLREVGGAVQHSKATW*ICSPPA Trigger: TGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGA...GTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| 3UTR TCA 72 bp | AGGAAAAGGGATCGGCCACAGGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCCTTCTTGTACTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RKRDRPQAVRFP*TQLLSSFLYCS Trigger: TGAGCAGTACAAGAAGGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGCCTGTGGCCGATCCCTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| 3UTR GCA 72 bp | TTCGTGTTTGCTCTGACCAGGCAGAGGAGGCAGCGATaGCACCTGGGCTTCTCAGAGGAAAAATGTGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: FVFALTRQRRQR*HLGFSEEKCES Trigger: CGACTCACATTTTTCCTCTGAGAAGCCCAGGTGGCATCGCTGCCTCCTCTGCCTGGTCAGAGCAAACACGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | GAGCTCCTTCTTGTACTGCTCAGTGCGGCTGGGATGTaGGAAATGGATGATAGGGGAGAAGTGATGGACGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELLLVLLSAAGM*EMDDRGEVMDV Trigger: CACGTCCATCACTTCTCCCCTATCATCCATTTCCCACATCCCAGCCGCACTGAGCAGTACAAGAAGGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCCCATGTAGTAGCTTGAGTCCTTCCATTTGGGGAACCTGTGAGGTGCTATGCTCTGGGTCCCACTaGCCAACCAGCTTAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPCSSLSPSIWGTCEVLCSGSH*PTSLGK Trigger: CTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCA...TAGCACCTCACAGGTTCCCCAAATGGAAGGACTCAAGCTACTACATGGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTTTCTTAGCAAAGATGCTCTAGACCTTTCTTCCTaGGCCTGGCCAACACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NGTAVRLRGTQEFLSKDALDLSS*AWPTPF Trigger: GAAAGGTGTTGGCCAGGCCAAGGAAGAAAGGTCTAG...AGCATCTTTGCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACATTGAGAAGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTCTTCATCTTAACATaGTGCTCTGGGTCCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FTLRRLRLRLQGNGTAVRFFILT*CSGSHL Trigger: CAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAA...CCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTTCTCAATGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR CCA 72 bp | CTGGCCAACACCTTTCTTCATCTTAACATTGTGCTCTaGGTCCCACTTGCCAACCAGCTTAGGAAAGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LANTFLHLNIVL*VPLANQLRKDF Trigger: GAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| CDS-3UTR CCA 90 bp | GTACGCAGTGGCGCACGTGATGCCGCTGGAGCGGGAGGAAGGGCACCACAGCGTGGACCAACGGCTTGCTaGGGGCTGGGTCCCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSGARDAAGAGGRAPQRGPTAC*GLGPGK Trigger: CTTGCCGGGACCCAGCCCCCAGCAAGCCGTTGGTCC...ACGCTGTGGTGCCCTTCCTCCCGCTCCAGCGGCATCACGTGCGCCACTGCGTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCCGTAGGACTTCCCGGTaGCTGTCCAGCCGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GARQGMPVRVPSWKQPGARRTSR*LSSRAG Trigger: CCCTGCACGGCTGGACAGGCACCGGGAAGTCCTACG...GGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR GCA 90 bp | CTGCGCCAGGCCTCCAAGGCCACCTGGTTGATCTGCTCACCACCAGCATTGCTGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRQASKATWLICSPPALLKGPTA*WGLGPG Trigger: GCCGGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTT...CAGCAATGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAQTAGQWHGCEVAGYPAVRFP*TQLLSS Trigger: GGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGC...TGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCGGACCAACGGCTTGCTaGGGGCTGGGTCCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRLRLQGNGTAVRLRGTGPTAC*GLGPVQ Trigger: TTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCC...GGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | GGAGCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GARQGMPVRVPSWKQPGAAVRFP*TQLLSS Trigger: GGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGC...GGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTCGGCTTGCTGGGGGCTaGGTCCTGTACAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVLAWPSWIAGSSHSLWARLAGG*VLYKGL Trigger: AAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCG...AGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCTCAGGGAAGTAGGTaGTGCTGTCCAGCACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQAQTAGQWHGCEVAGYPQGSR*CCPAPP Trigger: AGGCGGTGCTGGACAGCACCACCTACTTCCCTGAGG...GTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACTGGCCAGCCAGGTGTTaGGCCAGGTCACATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQAQTAGQWHGCEVAGYWPARC*ARSHSR Trigger: TCTGGAATGTGACCTGGCTCAACACCTGGCTGGCCA...GTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCTCACCACCAGGGCCTTaGCCAAATGCTGGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARQGMPVRVPSWKQPGAFSPPGP*PNAGQP Trigger: TGGCTGGCCAGCATTTGGCCAAGGCCCTGGTGGTGA...GAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | TCCCACTTGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGCCACCCAGGCCTTCTGTCCAGCACCGCCTaGACCACCTCCTCGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLPTSLGKISSRSHPGLLSSTA*TTSSLG Trigger: GCCCAGCGAGGAGGTGGTTCAGGCGGTGCTGGACAG...AAGGCCTGGGTGGCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | GTCCCATACACAACCCAAGAAGGGCCCAGGAAGGGCTGCAGGACTTCCATCAGGCCTGAACCCAGCTCTTaGGCTCCTTCCGGCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPYTTQEGPRKGCRTSIRPEPSS*APSGKS Trigger: CGACTTGCCGGAAGGAGCTCAAGAGCTGGGTTCAGG...CCTGATGGAAGTCCTGCAGCCCTTCCTGGGCCCTTCTTGGGTTGTGTATGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARQGMPVRVPSWKQPGAFKGPTA*WGLGPV Trigger: TACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTT...GAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTTTCTTAGCCCATCCCGGAAGAGATaGTGTGCCAGCAGGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LQGNGTAVRLRGTQEFLSPSRKR*CASREL Trigger: TAGCTCCCTGCTGGCACAGCATCTCTTCCGGGATGG...GCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR GCA 90 bp | GGAGCCACCCAGGCCTTTCGTGTTTGCTCTGACCAGGCAGAGGAGGCAGCGATGGGGAGGCCACTGTCTTaGAGCCATTGGAGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GATQAFRVCSDQAEEAAMGRPLS*SHWRRR Trigger: TCTTCTCCTCCAATGGCTGCAAGACAGTGGCCTCCC...CATCGCTGCCTCCTCTGCCTGGTCAGAGCAAACACGAAAGGCCTGGGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAAGTGCGGCTGGGATGTaGGAAATGGATGATAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQAQTAGQWHGCEVAGYPSAAGM*EMDDRG Trigger: TCCCCTATCATCCATTTCCCACATCCCAGCCGCACT...TGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGCCTCCAAGGCCACCTaGTTGATCTGCTCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARQGMPVRVPSWKQPGAFASKAT*LICSPP Trigger: TGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGC...GAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | GTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTGAGTACAAAGGCCTTCAGTaGCTTCACCACCAGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLAWPSWIAGSSHSLWAEYKGLQ*LHHQGL Trigger: AAGGCCCTGGTGGTGAAGTCACTGAAGGCCTTTGTA...CTCAGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTTTCTTAGCCCACCTCCTGTAGGCTaGTTTCTTCCCTGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGNGTAVRLRGTQEFLSPPPVG*FLPCPC Trigger: ACAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGG...GCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR GCA 90 bp | ATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCAGCACCGTAGGACTTCCCGGTaGCTGTCCAGCCGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGGEELFYLREVGGAVQHRRTSR*LSSRAG Trigger: CCCTGCACGGCTGGACAGGCACCGGGAAGTCCTACG...GTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGACAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCCCGGAAGAGATGCTGTaGCAGCAGGGAGCTAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARQGMPVRVPSWKQPGAFPEEML*QQGANV Trigger: TACGTTAGCTCCCTGCTGGCACAGCATCTCTTCCGG...GAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTGTCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| 3UTR CAA 72 bp | TCCCTGTGGCTGCGCCAGGCCTCCAAGGCCACCTGGTaGATCTGCTCACCACCAGCATTGCTGATAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLWLRQASKATW*ICSPPALLIKM Trigger: CATCTTTATCAGCAATGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGAGGCCTGGCGCAGCCACAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| 3UTR CAA 72 bp | AGGCTCAGACTGCAGGGCAATGGCACGGCTGTGAGGTaGCGGGGTACCCAGGAGTTTCTTAGCAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRLQGNGTAVR*RGTQEFLSKDA Trigger: AGCATCTTTGCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAGTCTGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
||
| 3UTR CAA 72 bp | AAGGGCTGCAGGACTTCCATCAGGCCAGGAGGCAGCTaGTCCATCTCATCGAAGAGGAAAAGGGATCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGCRTSIRPGGS*SISSKRKRDRP Trigger: TGGCCGATCCCTTTTCCTCTTCGATGAGATGGACAAGCTGCCTCCTGGCCTGATGGAAGTCCTGCAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
||
| 3UTR CAA 72 bp | GTGCTCCTCCATGATGCCAGACCGCCAGAAGCCATGTaGAGGGTTGTCCATCACAGCTCGGGAGATTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLHDARPPEAM*RVVHHSSGDYW Trigger: CCAGTAATCTCCCGAGCTGTGATGGACAACCCTCAACATGGCTTCTGGCGGTCTGGCATCATGGAGGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156617.8 ENSMUST00000175763.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTAACATTGTGCTCTGGGTCCCACTTGCCAACCAGCTTAGGAAAGATTTCTACGCAGTGGCGCACGTaGTGCCGCTGGAGCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILTLCSGSHLPTSLGKISTQWRT*CRWSGR Trigger: CCTCCCGCTCCAGCGGCATCACGTGCGCCACTGCGT...AGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
||
| CDS-3UTR GCA 90 bp | TCCCACTTGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGCCACCCAGGCCTTACAGCGTCCAGCAGGTaGTCCTCCATGATGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLPTSLGKISSRSHPGLTASSR*SSMMPD Trigger: GTCTGGCATCATGGAGGAGCACCTGCTGGACGCTGT...AAGGCCTGGGTGGCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR TCA 90 bp | TTCTTCCTTGGCCTGGCCAACACCTTTCTTCATCTTAACATTGTGCTCTGGGTCGGCTCCAGGCCCAACTaGGCCAGCTCATTGAGTACG | + |
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Preference number: 4 (lower is better) Translates to: FFLGLANTFLHLNIVLWVGSRPN*ASSLST Trigger: CGTACTCAATGAGCTGGCTCAGTTGGGCCTGGAGCC...GACCCAGAGCACAATGTTAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR GCA 90 bp | TCCCACTTGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGCCACCCAGGCCTTTCTTGTACTGCTCAGTaGGGCTGGGATGTGGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SHLPTSLGKISSRSHPGLSCTAQ*GWDVGN Trigger: ATTTCCCACATCCCAGCCGCACTGAGCAGTACAAGA...AAGGCCTGGGTGGCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CCA 90 bp | CCACTTGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGCCACCCAGGCCTTTCCTGTCTTGCAGCCATTaGAGGAGAAGAGCTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: PLANQLRKDFFQEPPRPFLSCSH*RRRAVL Trigger: TAGAACAGCTCTTCTCCTCCAATGGCTGCAAGACAG...GAAAGGCCTGGGTGGCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| 3UTR CAA 72 bp | TCTCAGAGGAAAAATGTGAGTCGGGAGGCCACTGTCTaGCAGCCATTGGAGGAGAAGAGCTGTTCTACCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQRKNVSREATV*QPLEEKSCSTS Trigger: TGAGGTAGAACAGCTCTTCTCCTCCAATGGCTGCAAGACAGTGGCCTCCCGACTCACATTTTTCCTCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| 3UTR CAA 72 bp | CCTTTCTTCATCTTAACATTGTGCTCTGGGTCCCACTaGCCAACCAGCTTAGGAAAGATTTCTTCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PFFILTLCSGSH*PTSLGKISSRS Trigger: GCTCCTGGAAGAAATCTTTCCTAAGCTGGTTGGCAAGTGGGACCCAGAGCACAATGTTAAGATGAAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000175763.8 |
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| CDS CCA 90 bp | GCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTGCTGGGGGCTaGGTCCTCCGCCGGCGGCCGGCGGGGCGGCAGATGTTTCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: ACPAVQGKDQRLAGG*VLRRRPAGRQMFRA Trigger: GGCTCGAAACATCTGCCGCCCCGCCGGCCGCCGGCGGAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140999.2 |
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| CDS GCA 90 bp | CCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTaGAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PASRARSRIRRTSRR*SAEKPRPRRRRQPR Trigger: CCTTGGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTGCGAATGCGACTTCTGGCCCGACTTGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009707.14 ENSMUST00000140999.2 ENSMUST00000156617.8 ENSMUST00000175763.8 ENSMUST00000177382.2 |
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| CDS GCA 90 bp | GTGATGGACGTGAGGGCTGCGAAGGCCATCCCGGAAGAGATGCTGTaGCAGCAGGGAGCTAACGTAGGACTTCCCGGTGCCTGTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VMDVRAAKAIPEEML*QQGANVGLPGACPA Trigger: GGCTGGACAGGCACCGGGAAGTCCTACGTTAGCTCCCTGCTGGCACAGCATCTCTTCCGGGATGGCCTTCGCAGCCCTCACGTCCATCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000140999.2 |
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| CDS TCA 90 bp | GACTTCACCACCAGGGCCTTGGCCAAATGCTGGCCAGCCAGGTGTTaGGCCAGGTCACATTCCAGACCCGGCAAGTCGGGCCAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: DFTTRALAKCWPARC*ARSHSRPGKSGQKS Trigger: CGACTTCTGGCCCGACTTGCCGGGTCTGGAATGTGACCTGGCTCAACACCTGGCTGGCCAGCATTTGGCCAAGGCCCTGGTGGTGAAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS TCA 90 bp | GACCAACGGCTTGCTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTaGCTTCACCACCAGGGCCTTGGCCAAATGCTGGCCAGCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: DQRLAGGWVLYKGLQ*LHHQGLGQMLASQV Trigger: CACCTGGCTGGCCAGCATTTGGCCAAGGCCCTGGTGGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTCTGGCCAGCCAGGTGTaGAGCCAGGTCACATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: EVLAWPSWIAGSSHSLWALASQV*SQVTFQ Trigger: CTGGAATGTGACCTGGCTCAACACCTGGCTGGCCAG...AGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | CTGCAGGGCAATGGCACGGCTGTGAGGTTGCGGGGTACCCAGGAGTTTCTTAGCTTCACCACCAGGGCCTaGGCCAAATGCTGGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LQGNGTAVRLRGTQEFLSFTTRA*AKCWPA Trigger: GGCTGGCCAGCATTTGGCCAAGGCCCTGGTGGTGAA...GCTAAGAAACTCCTGGGTACCCCGCAACCTCACAGCCGTGCCATTGCCCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | GAGGTGCTAGCCTGGCCTAGCTGGATTGCTGGGTCCAGCCACAGTCTGTGGGCTCGGGAGGCCACTGTCTaGCAGCCATTGGAGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EVLAWPSWIAGSSHSLWAREATV*QPLEEK Trigger: CTTCTCCTCCAATGGCTGCAAGACAGTGGCCTCCCG...AGCCCACAGACTGTGGCTGGACCCAGCAATCCAGCTAGGCCAGGCTAGCACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS CCA 90 bp | TTCCTTGGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTGCTaGGGGCTGGGTCCTGTACAAAGGCCTTCAGTGACTTCACCACCA | + |
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Preference number: 5 (lower is better) Translates to: FLGLSSRAGKGPTAC*GLGPVQRPSVTSPP Trigger: TGGTGGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCCAAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177382.2 |
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| CDS-3UTR CAA 90 bp | ATTGGAGGAGAAGAGCTGTTCTACCTCAGGGAAGTAGGTGGTGCTGTCCAGCACGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: IGGEELFYLREVGGAVQHERTNG*LGAGSR Trigger: CCGGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTC...GTGCTGGACAGCACCACCTACTTCCCTGAGGTAGAACAGCTCTTCTCCTCCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| CDS TCA 90 bp | TCATCGAAGAGGAAAAGGGATCGGCCACAGGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCCTTCCGGCAAGTCGGGCCAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSKRKRDRPQAVRFP*TQLLSSFRQVGPEV Trigger: GACTTCTGGCCCGACTTGCCGGAAGGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGCCTGTGGCCGATCCCTTTTCCTCTTCGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| CDS GCA 90 bp | TTCTTCCTTGGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTGACTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: FFLGLSSRAGKGPTA*WGLGPVQRPSVTSP Trigger: TGGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCCAAGGAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177382.2 |
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| CDS CCA 90 bp | CTGGGTCCTGTACAAAGGCCTTCAGTGACTTCACCACCAGGGCCTTaGCCAAATGCTGGCCAGCCAGGTGTTGAGCCAGGTCACATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LGPVQRPSVTSPPGP*PNAGQPGVEPGHIP Trigger: TGGAATGTGACCTGGCTCAACACCTGGCTGGCCAGCATTTGGCCAAGGCCCTGGTGGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCATGTAGTAGCTTGAGTCCTTCCATTTGGGGAACCTGTGAGGTGCTAGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SGPCSSLSPSIWGTCEVLERTNG*LGAGSC Trigger: ACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTC...TAGCACCTCACAGGTTCCCCAAATGGAAGGACTCAAGCTACTACATGGGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | TTCTTCCAGGAGCCACCCAGGCCTTTCGTGTTTGCTCTGACCAGGCAGAGGAGGACTGTCTTGCAGCCATaGGAGGAGAAGAGCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FFQEPPRPFVFALTRQRRTVLQP*EEKSCS Trigger: AGAACAGCTCTTCTCCTCCAATGGCTGCAAGACAGT...CCTCCTCTGCCTGGTCAGAGCAAACACGAAAGGCCTGGGTGGCTCCTGGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | CAAGGCATGCCAGTAAGAGTCCCCAGCTGGAAGCAGCCAGGAGCCTTCGTCCCTTGCTCACCACCAGCATaGCTGATAAAGATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: QGMPVRVPSWKQPGAFVPCSPPA*LIKMKM Trigger: CATCTTCATCTTTATCAGCAATGCTGGTGGTGAGCA...AGGGACGAAGGCTCCTGGCTGCTTCCAGCTGGGGACTCTTACTGGCATGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | GGTTGCGGGGTACCCAGGAGTTTCTTAGCAAAGATGCTTCTAGACCTTTCTTCCTCCAAGGCCACCTGGTaGATCTGCTCACCACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GCGVPRSFLAKMLLDLSSSKATW*ICSPPA Trigger: TGCTGGTGGTGAGCAGATCAACCAGGTGGCCTTGGA...GGAAGAAAGGTCTAGAAGCATCTTTGCTAAGAAACTCCTGGGTACCCCGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS-3UTR CAA 90 bp | AAGATGCTTCTAGACCTTTCTTCCTTGGCCTGGCCAACACCTTTCTTCATCTTAAGGCCAGGAGGCAGCTaGTCCATCTCATCGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KMLLDLSSLAWPTPFFILRPGGS*SISSKR Trigger: CCTCTTCGATGAGATGGACAAGCTGCCTCCTGGCCT...TAAGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAGGTCTAGAAGCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS CCA 72 bp | GCCGTGCAGGGAAAGGACCAACGGCTTGCTGGGGGCTaGGTCCTCCGCCGGCGGCCGGCGGGGCGGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: AVQGKDQRLAGG*VLRRRPAGRQM Trigger: CATCTGCCGCCCCGCCGGCCGCCGGCGGAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140999.2 |
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| CDS CCA 72 bp | CTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTGCTaGGGGCTGGGTCCTCCGCCGGCGGCCGGCGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSSRAGKGPTAC*GLGPPPAAGGA Trigger: CGCCCCGCCGGCCGCCGGCGGAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140999.2 |
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| CDS GCA 72 bp | TGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCTCCGCCGGCGGCCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRAGKGPTA*WGLGPPPAAGG Trigger: CCCGCCGGCCGCCGGCGGAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140999.2 |
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| CDS CAA 72 bp | GTGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCTCCGCCGGCGGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VPVQPCRERTNG*LGAGSSAGGRR Trigger: CCGCCGGCCGCCGGCGGAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140999.2 |
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| CDS GCA 72 bp | TGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCCGGCAAGTCGGGCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRAGKGPTA*WGLGPGKSGQK Trigger: CTTCTGGCCCGACTTGCCGGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| CDS CCA 72 bp | CTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTGCTaGGGGCTGGGTCCCGGCAAGTCGGGCCAGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSSRAGKGPTAC*GLGPGKSGQKS Trigger: CGACTTCTGGCCCGACTTGCCGGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156617.8 |
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| CDS TCA 72 bp | ACCAGGGCCTTGGCCAAATGCTGGCCAGCCAGGTGTTaGGCCAGGTCACATTCCAGACCCGGCAAGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TRALAKCWPARC*ARSHSRPGKSG Trigger: GCCCGACTTGCCGGGTCTGGAATGTGACCTGGCTCAACACCTGGCTGGCCAGCATTTGGCCAAGGCCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS GCA 72 bp | GTGAGGGCTGCGAAGGCCATCCCGGAAGAGATGCTGTaGCAGCAGGGAGCTAACGTAGGACTTCCCGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VRAAKAIPEEML*QQGANVGLPGA Trigger: GGCACCGGGAAGTCCTACGTTAGCTCCCTGCTGGCACAGCATCTCTTCCGGGATGGCCTTCGCAGCCCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000140999.2 |
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| CDS GCA 72 bp | GGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GLSSRAGKGPTA*WGLGPVQRPSV Trigger: CACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177382.2 |
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| CDS GCA 72 bp | TGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTaGTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRAGKGPTA*WGLGPVQRPSV Trigger: CACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS CAA 72 bp | GTGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VPVQPCRERTNG*LGAGSCTKAFS Trigger: ACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009707.14 |
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| CDS CAA 72 bp | TGGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: WPVQPCRERTNG*LGAGSCTKAFS Trigger: ACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177382.2 |
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| CDS TCA 72 bp | CTTGCTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTaGCTTCACCACCAGGGCCTTGGCCAAATGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAGGWVLYKGLQ*LHHQGLGQMLA Trigger: GGCCAGCATTTGGCCAAGGCCCTGGTGGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS TCA 72 bp | AGGAAAAGGGATCGGCCACAGGCAGTGAGGTTCCCCTaGACCCAGCTCTTGAGCTCCTTCCGGCAAGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RKRDRPQAVRFP*TQLLSSFRQVG Trigger: CCCGACTTGCCGGAAGGAGCTCAAGAGCTGGGTTCAGGGGAACCTCACTGCCTGTGGCCGATCCCTTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175763.8 |
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| CDS CCA 72 bp | CTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTTGCTaGGGGCTGGGTCCTGTACAAAGGCCTTCAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LSSRAGKGPTAC*GLGPVQRPSVT Trigger: AGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009707.14 ENSMUST00000177382.2 |
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| CDS CAA 90 bp | TTTCTTCCTTGGCCTGTCCAGCCGTGCAGGGAAAGGACCAACGGCTaGCTGGGGGCTGGGTCCTGTACAAAGGCCTTCAGTGACTTCACC | + |
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Preference number: 6 (lower is better) Translates to: FLPWPVQPCRERTNG*LGAGSCTKAFSDFT Trigger: GGTGAAGTCACTGAAGGCCTTTGTACAGGACCCAGCCCCCAGCAAGCCGTTGGTCCTTTCCCTGCACGGCTGGACAGGCCAAGGAAGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177382.2 |
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