Pregenerated sensors for TOR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026848Ensembl transcript IDs: ENSMUST00000028199.12, ENSMUST00000132514.7, ENSMUST00000135507.8, ENSMUST00000156711.8
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCTGAGGGTACAGCAGGGTGCAGCAGGCCCATTAGTGGCATCTaGGGCATGGGTGCTGTTGGCCACACAGGACTTTTGGCCTGCGTT | + |
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Preference number: 1 (lower is better) Translates to: LPEGTAGCSRPISGI*GMGAVGHTGLLACV Trigger: AACGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCCTGCTGCACCCTGCTGTACCCTCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CCA 90 bp | AGGGTACAGCAGGGTGCAGCAGGCCCATTAGTGGCATCTGAGGCATaGGTGCTGTTGGCCACACAGGACTTTTGGCCTGCGTTCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: RVQQGAAGPLVASEA*VLLATQDFWPAFRQ Trigger: CTGTCTGAACGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCCTGCTGCACCCTGCTGTACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR GCA 90 bp | TCGATGAGGTTTTTGTCTATTAGCCCACTGTGCCACAGGCCACTGTaGTTGTTGTTGAAGACGCCCACAGACAGCACAGGCTCCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SMRFLSISPLCHRPL*LLLKTPTDSTGSRS Trigger: GGACCTGGAGCCTGTGCTGTCTGTGGGCGTCTTCAACAACAAGCACAGTGGCCTGTGGCACAGTGGGCTAATAGACAAAAACCTCATCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132514.7 ENSMUST00000156711.8 |
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| 3UTR CCA 90 bp | ACAATTGATAGGCAAGGTACAAGGCAGGTTGTGACCCATACACAGTaGGAGACTGGACAGAGCATCCCACAGCCAGGGCTGCGAGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: TIDRQGTRQVVTHTQ*ETGQSIPQPGLRAV Trigger: TACTGCTCGCAGCCCTGGCTGTGGGATGCTCTGTCCAGTCTCCCACTGTGTATGGGTCACAACCTGCCTTGTACCTTGCCTATCAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR TCA 90 bp | CTCCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTaGGATTACACCCAGAACCCACAAGCTGAGTTGTGCCAGTATAGT | + |
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Preference number: 1 (lower is better) Translates to: LPTVRAAQMPLKASS*DYTQNPQAELCQYS Trigger: ACTATACTGGCACAACTCAGCTTGTGGGTTCTGGGTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR TCA 90 bp | AACAGGTCACAAACAGTAACTCGGCTCCAGTCCAAGACTATGGCCTaGAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: NRSQTVTRLQSKTMA*KSPSPWHVLVCFLL Trigger: AAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAGTCTTGGACTGGAGCCGAGTTACTGTTTGTGACCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CCA 90 bp | CACCAGGCCTTTCAAAGTTGGAGATCAGTAACAGCAGTCCAAAGGTaGCCAACACGTGTCCACGTATTACATCACTGTAAACAGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: HQAFQSWRSVTAVQR*PTRVHVLHHCKQKT Trigger: GGTTTTCTGTTTACAGTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAAGGCCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGACTGGACAGAGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGGTGGCATCTGAGGCATaGGTGCTGTTGGCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: VGDWTEHPTARAASSSEQVASEA*VLLATQ Trigger: CTGTGTGGCCAACAGCACCCATGCCTCAGATGCCAC...CTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCTCTGTCCAGTCTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGACTGGACAGAGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGAAGGTCAAGCCCACATaGTCCCCTCTAGCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VGDWTEHPTARAASSSEQKVKPT*SPLAVS Trigger: GCTCACTGCTAGAGGGGAGCATGTGGGCTTGACCTT...CTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCTCTGTCCAGTCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACTCTGTGTCCCTGTGTaGTCCAGGGGCCTCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: APYSQSSPDATQGVILRLLCVPV*SRGLRG Trigger: CCCTCTGAGGCCCCTGGAGCACACAGGGACACAGAG...TAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTAGGAAACCCTGCCTCCCTGAGGGTACAGCAGGGTGCAGCAGGCCCATTATACACAGTGGGAGACTaGACAGAGCATCCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: VVGNPASLRVQQGAAGPLYTVGD*TEHPTA Trigger: GGCTGTGGGATGCTCTGTCCAGTCTCCCACTGTGTA...TAATGGGCCTGCTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTCCTACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | AGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGAAGGCATAAACTCAAAGAAACCCTGCCTCCCTaGGGGTACAGCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SIPQPGLRAVANRRHKLKETLPP*GYSRVQ Trigger: CTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTC...TTTGAGTTTATGCCTTCTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCATGGGTGCTGTTGGCCACACAGGACTTTTGGCCTGCGTTCAGACAGTCCACAGGTGCAAATGTaGAAAGCCCCAAGGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LRHGCCWPHRTFGLRSDSPQVQM*KAPRGL Trigger: GAGCCCCCTTGGGGCTTTGCACATTTGCACCTGTGG...ACTGTCTGAACGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCACTGCTCACACTGACAGTCCAGCCAAGGTCAAGCCCACATGCTCCCCTTCCCAAGTCCACAGGTaGAAATGTGCAAAGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: APTAHTDSPAKVKPTCSPSQVHR*KCAKPQ Trigger: TTGGGGCTTTGCACATTTGCACCTGTGGACTTGGGA...AGGGGAGCATGTGGGCTTGACCTTGGCTGGACTGTCAGTGTGAGCAGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CAA 90 bp | GTTCTCACAGGGAGGCTGGGGCAGGCCACACCAGGCCTTTCAAAGTaGGAGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VLTGRLGQATPGLSK*EISNSSPKVANTCP Trigger: TGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGGCCTGCCCCAGCCTCCCTGTGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACCAGCTGAGGAACCCTaGACCCTGATCTTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: APYSQSSPDATQGVILRLPAEEP*TLIFLL Trigger: CAGCAGGAAGATCAGGGTTCAGGGTTCCTCAGCTGG...TAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCTCTGGTGTACAGCAGACACACTCCTTCCCATGGGGTTTGGCCAGGTCAGAGGCATGGGTGCTGTTaGCCACACAGGACTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: ASLVYSRHTPSHGVWPGQRHGCC*PHRTFG Trigger: GCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCT...CTGACCTGGCCAAACCCCATGGGAAGGAGTGTGTCTGCTGTACACCAGAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGTCCAGGGCCGTCTTAGTGATCAGGTCTCCTCCTGCATTGCTGAGGAAGCTTCAAAGTGCTCCATaGCAAGGCCTGGAACGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QKSRAVLVIRSPPALLRKLQSAP*QGLERG Trigger: ACCCCGTTCCAGGCCTTGTCATGGAGCACTTTGAAG...CTTCCTCAGCAATGCAGGAGGAGACCTGATCACTAAGACGGCCCTGGACTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAAATCGGAGCTTGACCTTCAGAGCAAGTGTAACAGGCAAACAGGGTCCAGAAACCCTGCCTCCCTaGGGGTACAGCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SANRSLTFRASVTGKQGPETLPP*GYSRVQ Trigger: CTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTC...TGGACCCTGTTTGCCTGTTACACTTGCTCTGAAGGTCAAGCTCCGATTTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGAAGGCATAAACTCAAATCGGGCCCTCATCTCTaGCCGCACACACATCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SIPQPGLRAVANRRHKLKSGPHL*PHTHLH Trigger: GTGAAGATGTGTGTGCGGGCAGAGATGAGGGCCCGA...TTTGAGTTTATGCCTTCTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACTTCTCACAGGGAGGCTaGGGCAGGCCACACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHFSQGG*GRPHQA Trigger: GGCCTGGTGTGGCCTGCCCCAGCCTCCCTGTGAGAA...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAATGGTTCACAAGGATAGGCTCACAGGCTCAGCTCCCTACAGTCAGAGCACCAGCTGAGGAACCCTaGACCCTGATCTTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TEWFTRIGSQAQLPTVRAPAEEP*TLIFLL Trigger: CAGCAGGAAGATCAGGGTTCAGGGTTCCTCAGCTGG...TGCTCTGACTGTAGGGAGCTGAGCCTGTGAGCCTATCCTTGTGAACCATTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATGGTTCACAAGGATAGGCTCACAGGCTCAGCTCCCTACAGTCAGAGCACCACAGGTGCAAATGTaGAAAGCCCCAAGGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TEWFTRIGSQAQLPTVRAPQVQM*KAPRGL Trigger: GAGCCCCCTTGGGGCTTTGCACATTTGCACCTGTGG...TGCTCTGACTGTAGGGAGCTGAGCCTGTGAGCCTATCCTTGTGAACCATTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGATGCCGCACTGACAGCATCCCAAGTCCACAGGTGCAAATGTGCAAAGCTTCAAAGTGCTCCATaGCAAGGCCTGGAACGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSDAALTASQVHRCKCAKLQSAP*QGLERG Trigger: ACCCCGTTCCAGGCCTTGTCATGGAGCACTTTGAAG...CTTTGCACATTTGCACCTGTGGACTTGGGATGCTGTCAGTGCGGCATCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACACTCCCAAGTCCACAGGTaGAAATGTGCAAAGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PYSQSSPDATQGVILRLHSQVHR*KCAKPQ Trigger: TTGGGGCTTTGCACATTTGCACCTGTGGACTTGGGA...GTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCCATTAGTGGCATCTGAGGCATGGGTGCTGTTGGCCACACAGGACTTTTGGAAGTTCATCTTCAGATaGCGCACTGACAGCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPLVASEAWVLLATQDFWKFIFR*RTDSIP Trigger: TGGGATGCTGTCAGTGCGGCATCTGAAGATGAACTT...CCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGAAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTGAGATACACAGTGGGAGACTaGACAGAGCATCCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLKVTLTLARFGLLPALRYTVGD*TEHPTA Trigger: GGCTGTGGGATGCTCTGTCCAGTCTCCCACTGTGTA...TCTCAAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CAA 90 bp | AACTCGGCTCCAGTCCAAGACTATGGCCTGAAAGTCACCCTCACCTaGGCACGTTTTGGTTTGCTTCCTGCTTTGAGACAGGGTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSAPVQDYGLKVTLT*ARFGLLPALRQGLS Trigger: AGAGAGACCCTGTCTCAAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAGTCTTGGACTGGAGCCGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACCCCCACTGCTCACACTaGCAGTCCAGCCAAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHPHCSH*QSSQGQ Trigger: TTGACCTTGGCTGGACTGTCAGTGTGAGCAGTGGGG...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | CCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACAGCAGTCCAAAGGTGGCCAGTACAAGGCAGGTTGTaGCCCATACACAGTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PHQAFQSWRSVTAVQRWPVQGRL*PIHSGR Trigger: TCTCCCACTGTGTATGGGTCACAACCTGCCTTGTAC...TGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATGGTTCACAAGGATAGGCTCACAGGCTCAGCTCCCTACAGTCAGAGCAGAAGGTCATTTCATCTaGCACACTGGTGACGACGTC | + |
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Preference number: 2 (lower is better) Translates to: TEWFTRIGSQAQLPTVRAEGHFI*HTGDDV Trigger: GACGTCGTCACCAGTGTGGCAGATGAAATGACCTTC...TGCTCTGACTGTAGGGAGCTGAGCCTGTGAGCCTATCCTTGTGAACCATTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CTATGGCCTGAAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTGGGACTGCACAGTCTTaGAGCCCTTGTCTGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LWPESHPHLGTFWFASCFGTAQS*SPCLSR Trigger: TCTACTCAGACAAGGGCTGCAAGACTGTGCAGTCCC...AAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACAGGAACCCTGAACCCTaGTCTTCCTGCTGGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHRNPEP*SSCWDH Trigger: ATGATCCCAGCAGGAAGATCAGGGTTCAGGGTTCCT...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAATGGTTCACAAGGATAGGCTCACAGGCTCAGCTCCCTACAGTCAGAGCACTTGCAGCCCTTGTCTaGGTAGATCTTCTCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: TEWFTRIGSQAQLPTVRALAALV*VDLLIL Trigger: AAGGATGAGAAGATCTACTCAGACAAGGGCTGCAAG...TGCTCTGACTGTAGGGAGCTGAGCCTGTGAGCCTATCCTTGTGAACCATTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACTCCCACTCCACTGGATaGAGAGCTCAGTGGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHSHSTG*RAQWKS Trigger: GGATTTCCACTGAGCTCTTCATCCAGTGGAGTGGGA...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACACTTCCTATGCATGTTCTaGAAATCGGAGCTTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: PYSQSSPDATQGVILRLHFLCMF*KSELDL Trigger: AAGGTCAAGCTCCGATTTGCAGAACATGCATAGGAA...GTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACAGCAGTCCAAAGGTGGCCAGAGCTTCTCTTCCTATaGATGTTCTGCAAATCGGAG | + |
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Preference number: 2 (lower is better) Translates to: PHQAFQSWRSVTAVQRWPELLFL*MFCKSE Trigger: CTCCGATTTGCAGAACATGCATAGGAAGAGAAGCTC...TGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACCTCCCAGAATCTACCTaGCTTTGCCTCAAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHLPEST*LCLKSA Trigger: AGCACTCTTGAGGCAAAGGCAGGTAGATTCTGGGAG...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACTCCAGTCCAAGACTATaGCCTGAAAGTCACCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHSSPRL*PESHPH Trigger: GTGAGGGTGACTTTCAGGCCATAGTCTTGGACTGGA...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATGCTTTTATTATCTTGCGTCCATCTCTGTTCTCACAGGGAGGCTGGGGCAACAGGACTTTTGGCCTaGGTTCAGACAGTTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: AMLLLSCVHLCSHREAGATGLLA*VQTVLV Trigger: AACCAAAACTGTCTGAACGCAGGCCAAAAGTCCTGT...TGCCCCAGCCTCCCTGTGAGAACAGAGATGGACGCAAGATAATAAAAGCATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR GCA 90 bp | CTATGGCCTGAAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTCCACAAGCTGAGTTGTaGCAGTATAGTTCTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: LWPESHPHLGTFWFASCFPQAEL*QYSSTL Trigger: GAGAGTAGAACTATACTGGCACAACTCAGCTTGTGG...AAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR-3UTR CCA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGGTGGCATCTGAGGCATaGGTGCTGTTGGCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: VILFKAFPCYKNSHSTTLVASEA*VLLATQ Trigger: CTGTGTGGCCAACAGCACCCATGCCTCAGATGCCAC...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CAA 90 bp | CTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATaGTATAAAAACATGGCAGAGTTTCCATGTCTGCAGCTGCATAGC | + |
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Preference number: 2 (lower is better) Translates to: LFKAFPCYKNSHSTT*YKNMAEFPCLQLHS Trigger: GCTATGCAGCTGCAGACATGGAAACTCTGCCATGTTTTTATACAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| 3UTR CCA 72 bp | CAGGGTGCAGCAGGCCCATTAGTGGCATCTGAGGCATaGGTGCTGTTGGCCACACAGGACTTTTGGCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QGAAGPLVASEA*VLLATQDFWPA Trigger: CGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCCTGCTGCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | GTCCTCATCGACGGCAGCCCCTCGGGCCCTCATCTCTaGCCGCACACACATCTTCACGTGTTTGTACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VLIDGSPSGPHL*PHTHLHVFVLQ Trigger: TTGGAGTACAAACACGTGAAGATGTGTGTGCGGGCAGAGATGAGGGCCCGAGGGGCTGCCGTCGATGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGAGGCTGGGGCAGGCCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACGGTGTGCCCCAGCACTaGTGGCACTTCCTAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGRLGQATPGLSKLEISNGVPQH*WHFLGF Trigger: AAAACCTAGGAAGTGCCACAAGTGCTGGGGCACACC...GTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGGCCTGCCCCAGCCTCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | GTGGGAGGTTCCCCTGAATCTTCCCACTCCACTGGATaGAGAGCTCAGTGGAAATCCAGCCGGGACTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VGGSPESSHSTG*RAQWKSSRDCT Trigger: TGTGCAGTCCCGGCTGGATTTCCACTGAGCTCTTCATCCAGTGGAGTGGGAAGATTCAGGGGAACCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | GTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTaGGATTACACCCAGAACCCACAAGCTGAGTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRAAQMPLKASS*DYTQNPQAELC Trigger: GCACAACTCAGCTTGTGGGTTCTGGGTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | GGCATTCCCTTGTGTAGCCTAGGCTTGCCTCAAACTTaGGACAGTCCTGCCATGGCCTCACAGGTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GIPLCSLGLPQT*DSPAMASQVLG Trigger: TCCCAGAACCTGTGAGGCCATGGCAGGACTGTCTCAAGTTTGAGGCAAGCCTAGGCTACACAAGGGAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | GGCCAGGTCAGCCCCAGCCTAGAGCTTCTCTTCCTATaGATGTTCTGCAAATCGGAGCTTGACCTTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQVSPSLELLFL*MFCKSELDLQS Trigger: GCTCTGAAGGTCAAGCTCCGATTTGCAGAACATGCATAGGAAGAGAAGCTCTAGGCTGGGGCTGACCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACAGCAGTCCAAAGGTGGCCATGGCCTGGCATTCCCTaGTGTAGCCTAGGCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PHQAFQSWRSVTAVQRWPWPGIP*CSLGLP Trigger: AGGCAAGCCTAGGCTACACAAGGGAATGCCAGGCCA...TGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | ATCCAGCCGGGACTGCACAGTCTTGCAGCCCTTGTCTaGGTAGATCTTCTCATCCTTGGGGAAGAAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IQPGLHSLAALV*VDLLILGEEGH Trigger: ATGACCTTCTTCCCCAAGGATGAGAAGATCTACTCAGACAAGGGCTGCAAGACTGTGCAGTCCCGGCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | TTTTTGTCTATTAGCCCACTGTGCCACAGGCCACTGTaGTTGTTGTTGAAGACGCCCACAGACAGCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLSISPLCHRPL*LLLKTPTDSTG Trigger: GCCTGTGCTGTCTGTGGGCGTCTTCAACAACAAGCACAGTGGCCTGTGGCACAGTGGGCTAATAGACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132514.7 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACACTCTGCAAATCGGAGCTaGACCTTCAGAGCAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PYSQSSPDATQGVILRLHSANRS*TFRASV Trigger: TACACTTGCTCTGAAGGTCAAGCTCCGATTTGCAGA...GTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGAAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTGAGACTGGGATCATGGGTATaGTGCCCCATATCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLKVTLTLARFGLLPALRLGSWV*CPISSN Trigger: GTTGCTGGATATGGGGCACAATACCCATGATCCCAG...TCTCAAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | TTCTTAAACTCAAGCCAGCTGAGGAACCCTGAACCCTaGTCTTCCTGCTGGGATCATGGGTATTGTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLNSSQLRNPEP*SSCWDHGYCAP Trigger: TGGGGCACAATACCCATGATCCCAGCAGGAAGATCAGGGTTCAGGGTTCCTCAGCTGGCTTGAGTTTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | AAGGTTGGGTTCAAACTCCCAGAATCTACCTGCCTTTaGCTCAAGAGTGCTGGGATTAAAGGTGTGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVGFKLPESTCL*LKSAGIKGVPQ Trigger: CTGGGGCACACCTTTAATCCCAGCACTCTTGAGGCAAAGGCAGGTAGATTCTGGGAGTTTGAACCCAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGCTTTTATTATCTTGCGTCCATCTCTGTTCTCACAGGGAGGCTGGGGCAAGAATCTACCTGCCTTaGCCTCAAGAGTGCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: AMLLLSCVHLCSHREAGARIYLP*PQECWD Trigger: ATCCCAGCACTCTTGAGGCAAAGGCAGGTAGATTCT...TGCCCCAGCCTCCCTGTGAGAACAGAGATGGACGCAAGATAATAAAAGCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | GCACCACCACACCCAGCTCAGCGTGGCATTTCTAAGTaGCAAGCTGTGATTCTCTTTAAGGCATTTCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: APPHPAQRGISK*QAVILFKAFPC Trigger: ACACGGAAATGCCTTAAAGAGAATCACAGCTTGTCACTTAGAAATGCCACGCTGAGCTGGGTGTGGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | CCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTaGGACAGGGTCTCTCTGTACGTAGCTCAACTAACT | + |
|
Preference number: 3 (lower is better) Translates to: PSPWHVLVCFLL*DRVSLYVAQLT Trigger: AGTTAGTTGAGCTACGTACAGAGAGACCCTGTCTCAAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGAGGCTGGGGCAGGCCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACAATGCTTTTATTATCTaGCGTCCATCTCTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGRLGQATPGLSKLEISNNAFII*RPSLFS Trigger: TGAGAACAGAGATGGACGCAAGATAATAAAAGCATT...GTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGGCCTGCCCCAGCCTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | GTAGACAAGGTTGGGTTCAAACTCCCAGAATCTACCTaGCTTTGCCTCAAGAGTGCTGGGATTAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VDKVGFKLPEST*LCLKSAGIKGV Trigger: CACACCTTTAATCCCAGCACTCTTGAGGCAAAGGCAGGTAGATTCTGGGAGTTTGAACCCAACCTTGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGTCCTTCCCATGGGGTTaGGCCAGGTCAGCCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VILFKAFPCYKNSHSTTLSFPWG*ARSAPA Trigger: GGCTGGGGCTGACCTGGCCAAACCCCATGGGAAGGA...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | GTGAGCATTCTTAAAGTTCATCTTCAGATGCCGCACTaGCAGCATCCCAAGTCCACAGGTGCAAATGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSILKVHLQMPH*QHPKSTGANVQ Trigger: TTGCACATTTGCACCTGTGGACTTGGGATGCTGTCAGTGCGGCATCTGAAGATGAACTTTAAGAATGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | ATCCACCTGCTCATAGTAGTCCAGGAAGGGCTTGATTaGATCAATGATCCCAGGATGCAACTTATCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: IHLLIVVQEGLD*INDPRMQLIHL Trigger: GAGATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTATGAGCAGGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGGGTGTGCCCCAGCACTaGTGGCACTTCCTAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VILFKAFPCYKNSHSTTLGVPQH*WHFLGF Trigger: AAAACCTAGGAAGTGCCACAAGTGCTGGGGCACACC...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACAATGCTTTTATTATCTaGCGTCCATCTCTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHNAFII*RPSLFS Trigger: TGAGAACAGAGATGGACGCAAGATAATAAAAGCATT...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR GCA 72 bp | TGTATAAAAACATGGCAGAGTTTCCATGTCTGCAGCTaGATAGCAACTGTAGGACAGAATGGTTCACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CIKTWQSFHVCS*IATVGQNGSQG Trigger: TCCTTGTGAACCATTCTGTCCTACAGTTGCTATGCAGCTGCAGACATGGAAACTCTGCCATGTTTTTATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR CCA 72 bp | TTTCAAAGTTGGAGATCAGTAACAGCAGTCCAAAGGTaGCCAACACGTGTCCACGTATTACATCACTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FQSWRSVTAVQR*PTRVHVLHHCK Trigger: TTTACAGTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCTCCAACTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGAGGTCTCCTCCTGCATaGCTGAGGAAGATGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: VILFKAFPCYKNSHSTTLRSPPA*LRKMKM Trigger: CATCTTCATCTTCCTCAGCAATGCAGGAGGAGACCT...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
||
| 3UTR TCA 72 bp | ACCCAGCTCAGCGTGGCATTTCTAAGTGACAAGCTGTaGTTCTCTTTAAGGCATTTCCGTGTTATAAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TQLSVAFLSDKL*FSLRHFRVIKI Trigger: TATTTTTATAACACGGAAATGCCTTAAAGAGAATCACAGCTTGTCACTTAGAAATGCCACGCTGAGCTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| 3UTR CCA 72 bp | ATAAAAATAGCCATTCTACCACATTGTATAAAAACATaGCAGAGTTTCCATGTCTGCAGCTGCATAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: IKIAILPHCIKT*QSFHVCSCIAT Trigger: AGTTGCTATGCAGCTGCAGACATGGAAACTCTGCCATGTTTTTATACAATGTGGTAGAATGGCTATTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGACTGGACAGAGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGGCGCCCACAGGGCCGTaGAGCCCCCAAACGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGDWTEHPTARAASSSEQAPTGP*SPQTLR Trigger: TCGGAGCGTTTGGGGGCTCCACGGCCCTGTGGGCGC...CTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCTCTGTCCAGTCTCCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGGAAACCCTGCCTCCCTGAGGGTACAGCAGGGTGCAGCAGGCCCATTAAGGACAGGTAGCCGGTaGGCGCCGACACGGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VVGNPASLRVQQGAAGPLRTGSR*APTRPR Trigger: TCGGGGCCGTGTCGGCGCTCACCGGCTACCTGTCCT...TAATGGGCCTGCTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTCCTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCATGGGTGCTGTTGGCCACACAGGACTTTTGGCCTGCGTTCAGACAGTAGGGGCCGTTCCTCATaGCAGCACTCGGTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRHGCCWPHRTFGLRSDSRGRSS*QHSVKR Trigger: CCGCTTCACCGAGTGCTGCCATGAGGAACGGCCCCT...ACTGTCTGAACGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR GCA 90 bp | CGCCAGAAGTCCAGGGCCGTCTTAGTGATCAGGTCTCCTCCTGCATTGCTGAGGGTGCCAGCCCAGCCGTaGAAGGACAGAGTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQKSRAVLVIRSPPALLRVPAQP*KDRVNG Trigger: ACCATTGACTCTGTCCTTGCACGGCTGGGCTGGCAC...CCTCAGCAATGCAGGAGGAGACCTGATCACTAAGACGGCCCTGGACTTCTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132514.7 ENSMUST00000156711.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGCCCAGTGGTAGGAAACCCTGCCTCCCTGAGGGTACAGCAGGGTGCAGCTCTATTAGCCCACTGTaGCACAGGCCACTGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPSGRKPCLPEGTAGCSSISPL*HRPLCL Trigger: CAAGCACAGTGGCCTGTGGCACAGTGGGCTAATAGA...GCTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTCCTACCACTGGGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTGGTGTACAGCAGACACACTCCTTCCCATGGGGTTTGGCCAGGTCAGTCGGGCCCTCATCTCTaGCCGCACACACATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYSRHTPSHGVWPGQSGPHL*PHTHLH Trigger: GTGAAGATGTGTGTGCGGGCAGAGATGAGGGCCCGA...CTGACCTGGCCAAACCCCATGGGAAGGAGTGTGTCTGCTGTACACCAGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR CCA 90 bp | CTGCTCATAGTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAAGCGCCCACAGGGCCGTaGAGCCCCCAAACGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLIVVQEGLDCINDPRMQAPTGP*SPQTLR Trigger: TCGGAGCGTTTGGGGGCTCCACGGCCCTGTGGGCGC...TTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTATGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
||
| CDS-3UTR CCA 90 bp | GCGGTAGGAAATCCCATCCACCTGCTCATAGTAGTCCAGGAAGGGCTTGATTGCAGGGGCCGTTCCTCATaGCAGCACTCGGTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGNPIHLLIVVQEGLDCRGRSS*QHSVKR Trigger: CCGCTTCACCGAGTGCTGCCATGAGGAACGGCCCCT...GCAATCAAGCCCTTCCTGGACTACTATGAGCAGGTGGATGGGATTTCCTACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAGGCTGGGGCAGGCCACACCAGGCCTTTCAAAGTTGGAGATCAGTAACCCTCGGATCCACTTCTaGAGCTGGTCCTGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: TGRLGQATPGLSKLEISNPRIHF*SWSWYT Trigger: GGTGTACCAGGACCAGCTCCAGAAGTGGATCCGAGG...GTTACTGATCTCCAACTTTGAAAGGCCTGGTGTGGCCTGCCCCAGCCTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTCTTCCTGCCCGCCAGAAGTCCAGGGCCGTCTTAGTGATCAGGTCTCCCCTCGGATCCACTTCTaGAGCTGGTCCTGGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFSSCPPEVQGRLSDQVSPRIHF*SWSWTN Trigger: GTTGGTCCAGGACCAGCTCCAGAAGTGGATCCGAGG...GGAGACCTGATCACTAAGACGGCCCTGGACTTCTGGCGGGCAGGAAGAAAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
||
| 3UTR CAA 72 bp | GCAGGCCCATTAGTGGCATCTGAGGCATGGGTGCTGTaGGCCACACAGGACTTTTGGCCTGCGTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPLVASEAWVL*ATQDFWPAFRQ Trigger: CTGTCTGAACGCAGGCCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATAGGACAGGTAGCCGGTaGGCGCCGACACGGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VVQEGLDCINDPRMQLIHRTGSR*APTRPR Trigger: TCGGGGCCGTGTCGGCGCTCACCGGCTACCTGTCCT...ATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGCCCAGTGGTAGGAAACCCTGCCTCCCTGAGGGTACAGCAGGGTGCAGCCTTGCAGCCCTTGTCTaGGTAGATCTTCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQPSGRKPCLPEGTAGCSLAALV*VDLLIL Trigger: AAGGATGAGAAGATCTACTCAGACAAGGGCTGCAAG...GCTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTCCTACCACTGGGCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTGGTGTACAGCAGACACACTCCTTCCCATGGGGTTTGGCCAGGTCAGGGGACTGCACAGTCTTaGAGCCCTTGTCTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYSRHTPSHGVWPGQGTAQS*SPCLSR Trigger: TCTACTCAGACAAGGGCTGCAAGACTGTGCAGTCCC...CTGACCTGGCCAAACCCCATGGGAAGGAGTGTGTCTGCTGTACACCAGAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGACTGGACAGAGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGGTAGAGACGAACAGGTaGACAAAGTTACTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGDWTEHPTARAASSSEQVETNR*TKLLFR Trigger: CCTGAAGAGTAACTTTGTCCACCTGTTCGTCTCTAC...CTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCTCTGTCCAGTCTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCGTCTTAGTGATCAGGTCTCCTCCTGCATTGCTGAGGAAGATGAAGATGTGCCAGCCCAGCCGTaGAAGGACAGAGTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGRLSDQVSSCIAEEDEDVPAQP*KDRVNG Trigger: ACCATTGACTCTGTCCTTGCACGGCTGGGCTGGCAC...ATCTTCATCTTCCTCAGCAATGCAGGAGGAGACCTGATCACTAAGACGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCCACTGCTCACACTGACAGTCCAGCCAAGGTCAAGCCCACATGCTCCCCTTCAATGATCCCAGGATaGAACTTATCCATCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: APTAHTDSPAKVKPTCSPSMIPG*NLSISS Trigger: TGACGAGATGGATAAGTTGCATCCTGGGATCATTGA...AGGGGAGCATGTGGGCTTGACCTTGGCTGGACTGTCAGTGTGAGCAGTGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
||
| CDS-3UTR CCA 90 bp | GCCCCCACTGCTCACACTGACAGTCCAGCCAAGGTCAAGCCCACATGCTCCCCTACTCTTCAGGCCTTTTaGATAAAGGTTTTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: APTAHTDSPAKVKPTCSPTLQAF*IKVFSH Trigger: GTGGCTGAAAACCTTTATCCAAAAGGCCTGAAGAGT...AGGGGAGCATGTGGGCTTGACCTTGGCTGGACTGTCAGTGTGAGCAGTGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAATGGTTCACAAGGATAGGCTCACAGGCTCAGCTCCCTACAGTCAGAGCACCATCTCGTCAAAGATaGAGACGGAGCTGCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: TEWFTRIGSQAQLPTVRAPSRQR*RRSCHT Trigger: CGTGTGGCAGCTCCGTCTTCATCTTTGACGAGATGG...TGCTCTGACTGTAGGGAGCTGAGCCTGTGAGCCTATCCTTGTGAACCATTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS-3UTR GCA 90 bp | TCTGCAAATCGGAGCTTGACCTTCAGAGCAAGTGTAACAGGCAAACAGGGTCCAGTGCCAGCCCAGCCGTaGAAGGACAGAGTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SANRSLTFRASVTGKQGPVPAQP*KDRVNG Trigger: ACCATTGACTCTGTCCTTGCACGGCTGGGCTGGCAC...TGGACCCTGTTTGCCTGTTACACTTGCTCTGAAGGTCAAGCTCCGATTTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR GCA 90 bp | GCAATGCTTTTATTATCTTGCGTCCATCTCTGTTCTCACAGGGAGGCTGGGGCAGTGCCAGCCCAGCCGTaGAAGGACAGAGTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMLLLSCVHLCSHREAGAVPAQP*KDRVNG Trigger: ACCATTGACTCTGTCCTTGCACGGCTGGGCTGGCAC...TGCCCCAGCCTCCCTGTGAGAACAGAGATGGACGCAAGATAATAAAAGCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGAAACCCTGCCTCCCTGAGGGTACAGCAGGGTGCAGCAGGCCCATTAAGATCTTCTCATCCTTaGGGAAGAAGGTCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVGNPASLRVQQGAAGPLRSSHP*GRRSFH Trigger: ATGAAATGACCTTCTTCCCCAAGGATGAGAAGATCT...TAATGGGCCTGCTGCACCCTGCTGTACCCTCAGGGAGGCAGGGTTTCCTACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS-3UTR CCA 90 bp | GATGAAGATGGCTCTGCGGTAGGAAATCCCATCCACCTGCTCATAGTAGTCCAGTTCTGGAGCTGGTCCTaGACCAACCTGGTACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEDGSAVGNPIHLLIVVQFWSWS*TNLVHL Trigger: AAGGTGTACCAGGTTGGTCCAGGACCAGCTCCAGAA...CTGGACTACTATGAGCAGGTGGATGGGATTTCCTACCGCAGAGCCATCTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCATAGTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACCTCGGATCCACTTCTaGAGCTGGTCCTGGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVVQEGLDCINDPRMQPRIHF*SWSWTN Trigger: GTTGGTCCAGGACCAGCTCCAGAAGTGGATCCGAGG...TTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTATGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGTCCAGGGCCGTCTTAGTGATCAGGTCTCCTCCTGCATTGCTGAGGAAGGTAGAGACGAACAGGTaGACAAAGTTACTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSRAVLVIRSPPALLRKVETNR*TKLLFR Trigger: CCTGAAGAGTAACTTTGTCCACCTGTTCGTCTCTAC...CTTCCTCAGCAATGCAGGAGGAGACCTGATCACTAAGACGGCCCTGGACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| 3UTR CAA 72 bp | CCAGTCCAAGACTATGGCCTGAAAGTCACCCTCACCTaGGCACGTTTTGGTTTGCTTCCTGCTTTGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PVQDYGLKVTLT*ARFGLLPALRQ Trigger: CTGTCTCAAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAGTCTTGGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR TCA 90 bp | ATAGTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATGGCAGCACTCGGTaGAGCGGCAGTAGAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: IVVQEGLDCINDPRMQLIHGSTR*SGSRNR Trigger: CCGATTTCTACTGCCGCTTCACCGAGTGCTGCCATG...GATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
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| CDS-3UTR GCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACGAAGGTCATTTCATCTaGCACACTGGTGACGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHEGHFI*HTGDDV Trigger: GACGTCGTCACCAGTGTGGCAGATGAAATGACCTTC...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS-3UTR CCA 90 bp | GATGAAGATGGCTCTGCGGTAGGAAATCCCATCCACCTGCTCATAGTAGTCCAGGTAGAGACGAACAGGTaGACAAAGTTACTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DEDGSAVGNPIHLLIVVQVETNR*TKLLFR Trigger: CCTGAAGAGTAACTTTGTCCACCTGTTCGTCTCTAC...CTGGACTACTATGAGCAGGTGGATGGGATTTCCTACCGCAGAGCCATCTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATCTCGGTCCTGGACCAACCTaGTACACCTTTATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQEGLDCINDPRMQLIHLGPGPT*YTFIFC Trigger: GCAGAAGATAAAGGTGTACCAGGTTGGTCCAGGACC...GAGATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135507.8 |
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| CDS-3UTR CCA 90 bp | GAAGATGAAGATGGCTCTGCGGTAGGAAATCCCATCCACCTGCTCATAGTAGTCTTCTGGAGCTGGTCCTaGACCAACCTTTATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDEDGSAVGNPIHLLIVVFWSWS*TNLYLL Trigger: CAGAAGATAAAGGTTGGTCCAGGACCAGCTCCAGAA...GACTACTATGAGCAGGTGGATGGGATTTCCTACCGCAGAGCCATCTTCATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | GGCCCATTAGTGGCATCTGAGGCATGGGTGCTGTTGGCCACACAGGACTTTTGGCAAGGACAGAGTCAATaGTTTCTTGGAATTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLVASEAWVLLATQDFWQGQSQ*FLGIFV Trigger: AACAAAAATTCCAAGAAACCATTGACTCTGTCCTTG...CCAAAAGTCCTGTGTGGCCAACAGCACCCATGCCTCAGATGCCACTAATGGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAGATGCCGCACTGACAGCATCCCAAGTCCACAGGTGCAAATGTGCAAAGACTCTTCAGGCCTTTTaGATAAAGGTTTTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSDAALTASQVHRCKCAKTLQAF*IKVFSH Trigger: GTGGCTGAAAACCTTTATCCAAAAGGCCTGAAGAGT...CTTTGCACATTTGCACCTGTGGACTTGGGATGCTGTCAGTGCGGCATCTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR TCA 90 bp | AGATCAGTAACAGCAGTCCAAAGGTGGCCAACACGTGTCCACGTATTACATCACTTTATCTTCTGCTCATaGGGGAAGTGCAAAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVTAVQRWPTRVHVLHHFIFCS*GKCKVE Trigger: CTCTACTTTGCACTTCCCTCATGAGCAGAAGATAAA...GTGATGTAATACGTGGACACGTGTTGGCCACCTTTGGACTGCTGTTACTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATCTCACTCTTCAGGCCTTTTaGATAAAGGTTTTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQEGLDCINDPRMQLIHLTLQAF*IKVFSH Trigger: GTGGCTGAAAACCTTTATCCAAAAGGCCTGAAGAGT...GAGATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR TCA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGCATGGCAGCACTCGGTaGAGCGGCAGTAGAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VILFKAFPCYKNSHSTTLHGSTR*SGSRNR Trigger: CCGATTTCTACTGCCGCTTCACCGAGTGCTGCCATG...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS-3UTR GCA 90 bp | GTGATTCTCTTTAAGGCATTTCCGTGTTATAAAAATAGCCATTCTACCACATTGAAATCCAGCCGGGACTaGACAGTCTTGCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VILFKAFPCYKNSHSTTLKSSRD*TVLQPL Trigger: CAAGGGCTGCAAGACTGTGCAGTCCCGGCTGGATTT...CAATGTGGTAGAATGGCTATTTTTATAACACGGAAATGCCTTAAAGAGAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS CCA 90 bp | CCGATGGCGATGCCCACGCTTACGGGCTCGAACGCCCCCGCCACGTaGGCGGCCAGCAGCGCCCACAGGGCCGTGGAGCCCCCAAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PMAMPTLTGSNAPAT*AASSAHRAVEPPNA Trigger: AGCGTTTGGGGGCTCCACGGCCCTGTGGGCGCTGCTGGCCGCCCACGTGGCGGGGGCGTTCGAGCCCGTAAGCGTGGGCATCGCCATCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000135507.8 |
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| CDS-3UTR CAA 90 bp | CCCTACAGTCAGAGCAGCCCAGATGCCACTCAAGGCGTCATCCTGAGATTACACTGGCTGATAAAATTCTaGCCCGTGCCAGCCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PYSQSSPDATQGVILRLHWLIKF*PVPAQP Trigger: CGGCTGGGCTGGCACGGGCAAGAATTTTATCAGCCA...GTGTAATCTCAGGATGACGCCTTGAGTGGCATCTGGGCTGCTCTGACTGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCATGGGGTTTGGCCAGGTCAGCCCCAGCCTAGAGCTTCTCTTCCTATGCAAGCCAGTCAATGCCTaGAGAATCACTTCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPMGFGQVSPSLELLFLCKPVNA*RITSVA Trigger: TGCCACCGAAGTGATTCTCAAGGCATTGACTGGCTT...GCATAGGAAGAGAAGCTCTAGGCTGGGGCTGACCTGGCCAAACCCCATGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | GATGAAGATGGCTCTGCGGTAGGAAATCCCATCCACCTGCTCATAGTAGTCCAGCCACACGCACTCACATaGCCTCGGATCCACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DEDGSAVGNPIHLLIVVQPHALT*PRIHFW Trigger: CCAGAAGTGGATCCGAGGCAATGTGAGTGCGTGTGG...CTGGACTACTATGAGCAGGTGGATGGGATTTCCTACCGCAGAGCCATCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | TCTTCAGATGCCGCACTGACAGCATCCCAAGTCCACAGGTGCAAATGTGCAAAGCCACACGCACTCACATaGCCTCGGATCCACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDAALTASQVHRCKCAKPHALT*PRIHFW Trigger: CCAGAAGTGGATCCGAGGCAATGTGAGTGCGTGTGG...CTTTGCACATTTGCACCTGTGGACTTGGGATGCTGTCAGTGCGGCATCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | CTATGGCCTGAAAGTCACCCTCACCTTGGCACGTTTTGGTTTGCTTCCTGCTTTCCACACGCACTCACATaGCCTCGGATCCACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWPESHPHLGTFWFASCFPHALT*PRIHFW Trigger: CCAGAAGTGGATCCGAGGCAATGTGAGTGCGTGTGG...AAAGCAGGAAGCAAACCAAAACGTGCCAAGGTGAGGGTGACTTTCAGGCCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | AGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGAAGGCATAAACTCAAAAAGCCAGTCAATGCCTaGAGAATCACTTCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIPQPGLRAVANRRHKLKKPVNA*RITSVA Trigger: TGCCACCGAAGTGATTCTCAAGGCATTGACTGGCTT...TTTGAGTTTATGCCTTCTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | AGCATCCCACAGCCAGGGCTGCGAGCAGTAGCGAACAGAAGGCATAAACTCAAAAGGTCTCCTCCTGCATaGCTGAGGAAGATGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SIPQPGLRAVANRRHKLKRSPPA*LRKMKM Trigger: CATCTTCATCTTCCTCAGCAATGCAGGAGGAGACCT...TTTGAGTTTATGCCTTCTGTTCGCTACTGCTCGCAGCCCTGGCTGTGGGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS-3UTR CAA 90 bp | GTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATCCACACGCACTCACATaGCCTCGGATCCACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVQEGLDCINDPRMQLIHPHALT*PRIHFW Trigger: CCAGAAGTGGATCCGAGGCAATGTGAGTGCGTGTGG...ATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCATAGTAGTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAAAAGCCAGTCAATGCCTaGAGAATCACTTCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLIVVQEGLDCINDPRMQKPVNA*RITSVA Trigger: TGCCACCGAAGTGATTCTCAAGGCATTGACTGGCTT...TTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTATGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS-3UTR CAA 90 bp | GTCCAGGAAGGGCTTGATTGCATCAATGATCCCAGGATGCAACTTATCCATCTCAAGCCAGTCAATGCCTaGAGAATCACTTCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQEGLDCINDPRMQLIHLKPVNA*RITSVA Trigger: TGCCACCGAAGTGATTCTCAAGGCATTGACTGGCTT...GAGATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132514.7 ENSMUST00000135507.8 ENSMUST00000156711.8 |
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| CDS GCA 90 bp | GGAAATCCCATCCACCTGCTCATAGTAGTCCAGGAAGGGCTTGATTaGATCAATGATCCCAGGATGCAACTTATCCATCTCGTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GNPIHLLIVVQEGLD*INDPRMQLIHLVKD Trigger: ATCTTTGACGAGATGGATAAGTTGCATCCTGGGATCATTGATGCAATCAAGCCCTTCCTGGACTACTATGAGCAGGTGGATGGGATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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| CDS TCA 72 bp | AGCGGCAGTAGAAATCGGTATAGGACAGGTAGCCGGTaGGCGCCGACACGGCCCCGATGGCGATGCCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSRNRYRTGSR*APTRPRWRCPR Trigger: GCGTGGGCATCGCCATCGGGGCCGTGTCGGCGCTCACCGGCTACCTGTCCTATACCGATTTCTACTGCCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028199.12 ENSMUST00000135507.8 |
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| CDS GCA 72 bp | TCCACTTCTGGAGCTGGTCCCGTGCCAGCCCAGCCGTaGAAGGACAGAGTCAATGGTTTCTTGGAATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: STSGAGPVPAQP*KDRVNGFLEFL Trigger: CAAAAATTCCAAGAAACCATTGACTCTGTCCTTGCACGGCTGGGCTGGCACGGGACCAGCTCCAGAAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132514.7 |
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| CDS TCA 72 bp | GGAGCTGGTCCTGGACCAACCTTTATCTTCTGCTCATaGGGGAAGTGCAAAGTAGAGACGAACAGGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GAGPGPTFIFCS*GKCKVETNRWT Trigger: TGTCCACCTGTTCGTCTCTACTTTGCACTTCCCTCATGAGCAGAAGATAAAGGTTGGTCCAGGACCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156711.8 |
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| CDS TCA 72 bp | TGGAGCTGGTCCTGGTACACCTTTATCTTCTGCTCATaGGGGAAGTGCAAAGTAGAGACGAACAGGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: WSWSWYTFIFCS*GKCKVETNRWT Trigger: TGTCCACCTGTTCGTCTCTACTTTGCACTTCCCTCATGAGCAGAAGATAAAGGTGTACCAGGACCAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028199.12 |
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