Pregenerated sensors for TOR1AIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050565Ensembl transcript IDs: ENSMUST00000060404.5, ENSMUST00000065648.15, ENSMUST00000097526.3, ENSMUST00000111754.9, ENSMUST00000111757.10, ENSMUST00000128941.8
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACATGACACCTCGTCCAGGTCCAAGCACTGCCCTAGAGGCTGGTaGGAGTCCTTGCAGGCAGCAGTGGGGCTGCAGTTCCCCGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LHDTSSRSKHCPRGW*ESLQAAVGLQFPGE Trigger: TTCTCCGGGGAACTGCAGCCCCACTGCTGCCTGCAAGGACTCTCACCAGCCTCTAGGGCAGTGCTTGGACCTGGACGAGGTGTCATGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR GCA 90 bp | GGAGGACAGGAAAGATCCACAGAAAGGGACAAAAGCTCACGGCCCTaGCCTACACCCTCCAGTAGCAGCTCATCTGCAGGTCTCTGTCGC | + |
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Preference number: 1 (lower is better) Translates to: GGQERSTERDKSSRP*PTPSSSSSSAGLCR Trigger: GCGACAGAGACCTGCAGATGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCTTTCCTGTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR TCA 90 bp | CCACTTCCCCACTTAAGGGATGGATGTCAGTTTTATCAGCGGAGGTaGGGTGCCATAAGGGAAAGCCCAATCTTCCTCCTCCTTTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: PLPHLRDGCQFYQRR*GAIRESPIFLLLCQ Trigger: TTGGCAAAGGAGGAGGAAGATTGGGCTTTCCCTTATGGCACCTCACCTCCGCTGATAAAACTGACATCCATCCCTTAAGTGGGGAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000128941.8 |
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| 3UTR GCA 90 bp | TCCCCACTTAAGGGATGGATGTCAGTTTTATCAGCGGAGGTGAGGTaGCATAAGGGAAAGCCCAATCTTCCTCCTCCTTTGCCAAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: SPLKGWMSVLSAEVR*HKGKPNLPPPLPSL Trigger: AAGACTTGGCAAAGGAGGAGGAAGATTGGGCTTTCCCTTATGGCACCTCACCTCCGCTGATAAAACTGACATCCATCCCTTAAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000128941.8 |
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| 3UTR TCA 90 bp | TCAACCCACAAGTGTATTATTAAAGTGAGTATTAAGGCCAGGCAGTaGTGCTGCACGCCTTTAACCCCAGCACTTAGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: STHKCIIKVSIKARQ*CCTPLTPALRRQRQ Trigger: CTGCCTCTGCCTCCTAAGTGCTGGGGTTAAAGGCGTGCAGCATCACTGCCTGGCCTTAATACTCACTTTAATAATACACTTGTGGGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR TCA 90 bp | CCTTGTGTTTATCAAGTTCCTTTCCTGACGGCATTTCTAACTAGCTaGGGACCTCAAGTCTTTTCTGAAAGAACACAGACAACAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: PCVYQVPFLTAFLTS*GPQVFSERTQTTVR Trigger: TCTCACTGTTGTCTGTGTTCTTTCAGAAAAGACTTGAGGTCCTCAGCTAGTTAGAAATGCCGTCAGGAAAGGAACTTGATAAACACAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR TCA 90 bp | AAACTCCATAGCATGGGTTATTTTTCCATTTCCATGGGAGGACACTaGGTTCACTCACCACAAGACAAGACAGTCTTTGGTTATATAGAG | + |
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Preference number: 1 (lower is better) Translates to: KLHSMGYFSISMGGH*VHSPQDKTVFGYIE Trigger: CTCTATATAACCAAAGACTGTCTTGTCTTGTGGTGAGTGAACTCAGTGTCCTCCCATGGAAATGGAAAAATAACCCATGCTATGGAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR GCA 90 bp | AAAGATTTTATTTCCAAATTAAGACTTGTAAGAAAGCAAGCCAGGTaGCCCCTGCTTCTGGTTGTGATTGAATTATCGGCACAACGAACC | + |
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Preference number: 1 (lower is better) Translates to: KDFISKLRLVRKQAR*PLLLVVIELSAQRT Trigger: GGTTCGTTGTGCCGATAATTCAATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTGGAAATAAAATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR GCA 90 bp | AAAGGGAAAGAAAGACCCAAGTCTAAAGACAGTTTCTATTTCCCCTaGTTGCTTCTAAGACTTGGTATTACTCAAGAAGGGATTCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: KGKERPKSKDSFYFP*LLLRLGITQEGIPS Trigger: ACTAGGAATCCCTTCTTGAGTAATACCAAGTCTTAGAAGCAAGCAGGGGAAATAGAAACTGTCTTTAGACTTGGGTCTTTCTTTCCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR GCA 90 bp | TCAGCTTTAACCCTTTCATGTCTTCCTATCCTTCCTACTCTAGAATaGACTTTCACTTCATCAATGGCTTTCAAACTTCTCTGTGAAACT | + |
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Preference number: 1 (lower is better) Translates to: SALTLSCLPILPTLE*TFTSSMAFKLLCET Trigger: AGTTTCACAGAGAAGTTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAGACATGAAAGGGTTAAAGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR GCA 90 bp | GGAGAATCAGATCTTCCTGTGCAAAACAATTCTATTCTACTGATGTaGTGGACACTTAAACAATACATCATGTTGTATTTTAACCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: GESDLPVQNNSILLM*WTLKQYIMLYFNPD Trigger: ATCAGGGTTAAAATACAACATGATGTATTGTTTAAGTGTCCAGCACATCAGTAGAATAGAATTGTTTTGCACAGGAAGATCTGATTCTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR CCA 90 bp | GAATCAGATCTTCCTGTGCAAAACAATTCTATTCTACTGATGTGCTaGACACTTAAACAATACATCATGTTGTATTTTAACCCTGATTGG | + |
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Preference number: 1 (lower is better) Translates to: ESDLPVQNNSILLMC*TLKQYIMLYFNPDW Trigger: CCAATCAGGGTTAAAATACAACATGATGTATTGTTTAAGTGTCCAGCACATCAGTAGAATAGAATTGTTTTGCACAGGAAGATCTGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCTGCCCTAGAGGCTGGTaGGAGTCCTTGCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RSTERDKSSRPCPTPSSSCPRGW*ESLQAA Trigger: TGCTGCCTGCAAGGACTCTCACCAGCCTCTAGGGCA...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCACAGGAAGGAGGGGCTaGTGGGTAGGCAAAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: RSTERDKSSRPCPTPSSSTGRRG*WVGKDK Trigger: CTTGTCTTTGCCTACCCAGCAGCCCCTCCTTCCTGT...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCACAGAGCCCTGAGACATaGCCCTTCCATGTCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: TERDKSSRPCPTPSSSSSQSPET*PFHVTS Trigger: AGAGGTGACATGGAAGGGCCATGTCTCAGGGCTCTG...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTGTAGGCAAAGACAAGTaGCATGGCCAAGGGGGATTT | + |
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Preference number: 2 (lower is better) Translates to: TPNPAAKSRHDSQEGGAAVGKDK*HGQGGF Trigger: AAATCCCCCTTGGCCATGTCACTTGTCTTTGCCTAC...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTCAATGGGAAGGGTACTaGGCCTCACTACTCCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPQWEGY*ASLLPL Trigger: TAGGGGGAGTAGTGAGGCTCAGTACCCTTCCCATTG...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTCTGTTTCCTCTCACATaGCAGTCACCTCCTAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPLFPLT*QSPPSG Trigger: CCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAG...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATAGCGGGACAGAGCCCTaGGACATGGCCCTTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHSGTEP*DMALPC Trigger: ACATGGAAGGGCCATGTCTCAGGGCTCTGTCCCGCT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATAGGCAGCAGTGGGGCTaGAGTTCCCCGGAGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHRQQWG*SSPENQ Trigger: CTGATTCTCCGGGGAACTGCAGCCCCACTGCTGCCT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTGAAACTCAGCTCCACTaGAATCCTAACAGAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPETQLH*NPNREP Trigger: GGGTTCTCTGTTAGGATTTCAGTGGAGCTGAGTTTC...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTCTCTTAGCAGCAGATaGCCCAAAACTGAGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPSLSSR*PKTECK Trigger: CTTGCACTCAGTTTTGGGTCATCTGCTGCTAAGAGA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCTGTTTCCTCTCACATaGCAGTCACCTCCTAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHLFPLT*QSPPSG Trigger: CCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAG...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATACAGGAAGGAGGGGCTaGTGGGTAGGCAAAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHTGRRG*WVGKDK Trigger: CTTGTCTTTGCCTACCCAGCAGCCCCTCCTTCCTGT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATTAAGACTTGTAAGAAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATATGGGGCATACAACATaGGGCCTCCCCTCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: QIKTCKKASQVPPASGCDMGHTT*GLPSRT Trigger: AGTCCTGGAGGGGAGGCCCCATGTTGTATGCCCCAT...ATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACCTTGCAGGCAGCAGTaGGGCTGCAGTTCCCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPILPTLECTFTSSMAFKPCRQQ*GCSSPE Trigger: CTCCGGGGAACTGCAGCCCCACTGCTGCCTGCAAGG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGTGTATTATTAAAGTaGGTATTAAGGCCAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RSTERDKSSRPCPTPSSSSVLLK*VLRPGS Trigger: ACTGCCTGGCCTTAATACTCACTTTAATAATACACT...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATGTAGGCAAAGACAAGTaGCATGGCCAAGGGGGATTT | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHVGKDK*HGQGGF Trigger: AAATCCCCCTTGGCCATGTCACTTGTCTTTGCCTAC...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCCTTCCTACTCTAGAATaGACTTTCACTTCATCAATG | + |
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Preference number: 2 (lower is better) Translates to: RSTERDKSSRPCPTPSSSLPTLE*TFTSSM Trigger: CATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAG...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATGAGTCTGAGGTAGCATaGGTCAAAGGCCAACATGAC | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHESEVA*VKGQHD Trigger: GTCATGTTGGCCTTTGACCCATGCTACCTCAGACTC...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAAGCGGGACAGAGCCCTaGGACATGGCCCTTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: LPILPTLECTFTSSMAFKSGTEP*DMALPC Trigger: ACATGGAAGGGCCATGTCTCAGGGCTCTGTCCCGCT...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATTCTCTTAGCAGCAGATaGCCCAAAACTGAGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHSLSSR*PKTECK Trigger: CTTGCACTCAGTTTTGGGTCATCTGCTGCTAAGAGA...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCAATTCTACTGATGTGCTaGACACTTAAACAATACATC | + |
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Preference number: 2 (lower is better) Translates to: TERDKSSRPCPTPSSSSSILLMC*TLKQYI Trigger: GATGTATTGTTTAAGTGTCCAGCACATCAGTAGAAT...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGAGAACCACCTGGGTCCTTGACATTTCTGCTTCTACACAGGCACTGAGAAAGGGGGAGCCTTaGTTTAACTTAGTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGKRTTWVLDISASTQALRKGEP*FNLVEE Trigger: CTCTTCCACTAAGTTAAACCAAGGCTCCCCCTTTCT...CAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGATACTTAGGTTGTGGTaGTTTTCAAGAGGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLILRLW*FSRGAR Trigger: CCTGGCCCCTCTTGAAAATCACCACAACCTAAGTAT...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGATAGCACTTGCCTAGCATaGACAAGGCACCCAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: ASQMFPGAFSKLLNSKSDSTCLA*TRHPDS Trigger: TGAATCTGGGTGCCTTGTGCATGCTAGGCAAGTGCT...ATCAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTGAATATGAAAAGCAATaGTCTAGAAGACAGTACACG | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPEYEKQ*SRRQYT Trigger: CGTGTACTGTCTTCTAGACCATTGCTTTTCATATTC...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTCTTGCTTCTAAGACTTaGTATTACTCAAGAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPLASKT*YYSRRD Trigger: ATCCCTTCTTGAGTAATACCAAGTCTTAGAAGCAAG...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR CCA 90 bp | AACATGGGGCCTCCCCTCCAGGACTACATTATCTTGTCAATACTTAGGTTGTGGAGAAAGGGGGAGCCTTaGTTTAACTTAGTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NMGPPLQDYIILSILRLWRKGEP*FNLVEE Trigger: CTCTTCCACTAAGTTAAACCAAGGCTCCCCCTTTCT...CCACAACCTAAGTATTGACAAGATAATGTAGTCCTGGAGGGGAGGCCCCATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGATATACTTAGGTTGTGGTaGTTTTCAAGAGGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ASQMFPGAFSKLLNSKSDILRLW*FSRGAR Trigger: CCTGGCCCCTCTTGAAAATCACCACAACCTAAGTAT...ATCAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTCTATTCTACTGATGTaGTGGACACTTAAACAATAC | + |
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Preference number: 2 (lower is better) Translates to: VHRLHLSVIANIRAHSAPSILLM*WTLKQY Trigger: GTATTGTTTAAGTGTCCAGCACATCAGTAGAATAGA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| 3UTR-3UTR GCA 90 bp | AAATTTAACAATGTCCAGTGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCAGCACTTGCCTAGCATaGACAAGGCACCCAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: KFNNVQWLLRCSQEPFLSSTCLA*TRHPDS Trigger: TGAATCTGGGTGCCTTGTGCATGCTAGGCAAGTGCT...GCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCACTGGACATTGTTAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACAGAGCCCTGAGACATaGCCCTTCCATGTCACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPILPTLECTFTSSMAFKQSPET*PFHVTS Trigger: AGAGGTGACATGGAAGGGCCATGTCTCAGGGCTCTG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAATTAAGACTTGTAAGAAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATAGAAAGGGGGAGCCTTaGTTTAACTTAGTGGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QIKTCKKASQVPPASGCDRKGEP*FNLVEE Trigger: CTCTTCCACTAAGTTAAACCAAGGCTCCCCCTTTCT...ATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGAGAAAGGGGGAGCCTTaGTTTAACTTAGTGGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLRKGEP*FNLVEE Trigger: CTCTTCCACTAAGTTAAACCAAGGCTCCCCCTTTCT...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATTTTCAAACTTCTCTGTaGAACTCAGCTCCACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHFQTSL*NSAPLK Trigger: TTTCAGTGGAGCTGAGTTTCACAGAGAAGTTTGAAA...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTTTTCAAACTTCTCTGTaGAACTCAGCTCCACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VDIPLESEVAWVKGQHDSFQTSL*NSAPLK Trigger: TTTCAGTGGAGCTGAGTTTCACAGAGAAGTTTGAAA...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATACCTCAAGTCTTTTCTaGAAGAACACAGACAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHTSSLF*KNTDNS Trigger: ACTGTTGTCTGTGTTCTTTCAGAAAAGACTTGAGGT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGAAAGAGAACCACCTGGGTCCTTGACATTTCTGCTTCTACACAGGCACTGGAGCCTTTTCTAAGCTaGTTAACTCCAAATCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: RGKRTTWVLDISASTQALEPFLS*LTPNLI Trigger: AATCAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTC...CAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTAAAAACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGAATGGGGCATACAACATaGGGCCTCCCCTCCAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PFKNYHENKDHKDPREERMGHTT*GLPSRT Trigger: AGTCCTGGAGGGGAGGCCCCATGTTGTATGCCCCAT...TCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTTTTTAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAGAACACAGACAACAGTaGGATTCCAGCAGGGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SFKIPNTYCFMCAPILNLEHRQQ*DSSRGG Trigger: TCCTCCCCTGCTGGAATCTCACTGTTGTCTGTGTTC...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTCCCTGTGTTTTACAATaGGTTGACAGAAAAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VDIPLESEVAWVKGQHDSPCVLQ*VDRKIP Trigger: TGGAATTTTTCTGTCAACTCATTGTAAAACACAGGG...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGTTGCCAAATAGTATGTaGCAGGACCAGTTAAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLLPNSM*QDQLKH Trigger: GTGTTTTAACTGGTCCTGTCACATACTATTTGGCAA...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATTCTCACTCAGCTGATTaGACTTATGACAAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHSHSAD*TYDKRK Trigger: TTTCCTTTTGTCATAAGTGCAATCAGCTGAGTGAGA...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATGGAACAGACCTTTTGTaGGTCAAGATCATTTTACTA | + |
|
Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHGTDLL*VKIILL Trigger: TAGTAAAATGATCTTGACCCACAAAAGGTCTGTTCC...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR GCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTTCTATTCTACTGATGTaGTGGACACTTAAACAATAC | + |
|
Preference number: 2 (lower is better) Translates to: VDIPLESEVAWVKGQHDSSILLM*WTLKQY Trigger: GTATTGTTTAAGTGTCCAGCACATCAGTAGAATAGA...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR GCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAGCCAACATGACAGTCTaGAAGGCACCTTTTGACGCG | + |
|
Preference number: 2 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKANMTV*KAPFDA Trigger: CGCGTCAAAAGGTGCCTTGCAGACTGTCATGTTGGC...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATATTCTACTGATGTGCTaGACACTTAAACAATACATC | + |
|
Preference number: 2 (lower is better) Translates to: FAALLSCSQAASVCHSQHILLMC*TLKQYI Trigger: GATGTATTGTTTAAGTGTCCAGCACATCAGTAGAAT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTAACAATGTCCAGTGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTTGCCAAATAGTATGTaGCAGGACCAGTTAAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: KFNNVQWLLRCSQEPFLSLPNSM*QDQLKH Trigger: GTGTTTTAACTGGTCCTGTCACATACTATTTGGCAA...GCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCACTGGACATTGTTAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACCTAGAATCTTAAGTGAAAATTTAACAATGTCCAGTGGCTTCTCAGATGTTAGCACTTGCCTAGCATaGACAAGGCACCCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: SPRILSENLTMSSGFSDVSTCLA*TRHPDS Trigger: TGAATCTGGGTGCCTTGTGCATGCTAGGCAAGTGCT...AACATCTGAGAAGCCACTGGACATTGTTAAATTTTCACTTAAGATTCTAGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAGAAACTCAGCTCCACTaGAATCCTAACAGAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKETQLH*NPNREP Trigger: GGGTTCTCTGTTAGGATTTCAGTGGAGCTGAGTTTC...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAACAATTCTATTCTACTaGTGTGCTGGACACTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFKIPNTYCFMCAPILNLTILFY*CAGHLN Trigger: GTTTAAGTGTCCAGCACATCAGTAGAATAGAATTGT...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAACAATTCTATTCTACTaGTGTGCTGGACACTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKTILFY*CAGHLN Trigger: GTTTAAGTGTCCAGCACATCAGTAGAATAGAATTGT...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR TCA 72 bp | ACCTCGTCCAGGTCCAAGCACTGCCCTAGAGGCTGGTaGGAGTCCTTGCAGGCAGCAGTGGGGCTGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TSSRSKHCPRGW*ESLQAAVGLQF Trigger: GAACTGCAGCCCCACTGCTGCCTGCAAGGACTCTCACCAGCCTCTAGGGCAGTGCTTGGACCTGGACGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR TCA 72 bp | CTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTaGGACATGGCCCTTCCATGTCACCTCTGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTCQSPPSGTEP*DMALPCHLCDW Trigger: CCAGTCACAGAGGTGACATGGAAGGGCCATGTCTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCTGGGAAGGTTCTTTTTaGAGCACAGCTGTTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSTERDKSSRPCPTPSSSWEGSF*STAVLA Trigger: GGCCAGAACAGCTGTGCTCAAAAAAGAACCTTCCCA...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR TCA 72 bp | GCTCCTGTCTTTAACAAGACTGTGGACCAAAGGCTGTaGGACAAAGCTGTACCATCAGCCACAGTGATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: APVFNKTVDQRL*DKAVPSATVIG Trigger: CCCAATCACTGTGGCTGATGGTACAGCTTTGTCTCACAGCCTTTGGTCCACAGTCTTGTTAAAGACAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR TCA 72 bp | AAGACCCTAGAGAGGAAAGAGAACCACCTGGGTCCTTaGCATTTCTGCTTCTACACAGGCACTGGATCACCT | + |
|
Preference number: 3 (lower is better) Translates to: KTLERKENHLGP*HFCFYTGTGSP Trigger: AGGTGATCCAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCTCTAGGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR TCA 72 bp | CACTTAAGGGATGGATGTCAGTTTTATCAGCGGAGGTaGGGTGCCATAAGGGAAAGCCCAATCTTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HLRDGCQFYQRR*GAIRESPIFLL Trigger: GAGGAGGAAGATTGGGCTTTCCCTTATGGCACCTCACCTCCGCTGATAAAACTGACATCCATCCCTTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000128941.8 |
||
| 3UTR GCA 72 bp | AAGGGATGGATGTCAGTTTTATCAGCGGAGGTGAGGTaGCATAAGGGAAAGCCCAATCTTCCTCCTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGWMSVLSAEVR*HKGKPNLPPPL Trigger: CAAAGGAGGAGGAAGATTGGGCTTTCCCTTATGGCACCTCACCTCCGCTGATAAAACTGACATCCATCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000128941.8 |
||
| 3UTR TCA 72 bp | AAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATTaGATTATCGGCACAACGAACCATACTGAACCCATT | + |
|
Preference number: 3 (lower is better) Translates to: KASQVPPASGCD*IIGTTNHTEPI Trigger: AATGGGTTCAGTATGGTTCGTTGTGCCGATAATTCAATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR CCA 72 bp | AATACTGTAGACATTCCTCTAGAGTCTGAGGTAGCATaGGTCAAAGGCCAACATGACAGTCTGCAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: NTVDIPLESEVA*VKGQHDSLQGT Trigger: GGTGCCTTGCAGACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTACAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTAAGACTTGTAAGAAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATGAACCACCTGGGTCCTaGACATTTCTGCTTCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: QIKTCKKASQVPPASGCDEPPGS*TFLLLH Trigger: GTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTC...ATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATTTAATGAGGAAACGATaGCTTTCCACTTGTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FAALLSCSQAASVCHSQHLMRKR*LSTCDL Trigger: CAGATCACAAGTGGAAAGCAATCGTTTCCTCATTAA...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR TCA 72 bp | AGCATGGGTTATTTTTCCATTTCCATGGGAGGACACTaGGTTCACTCACCACAAGACAAGACAGTCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SMGYFSISMGGH*VHSPQDKTVFG Trigger: ACCAAAGACTGTCTTGTCTTGTGGTGAGTGAACTCAGTGTCCTCCCATGGAAATGGAAAAATAACCCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR TCA 72 bp | GTAAGACACAATCAACCCACAAGTGTATTATTAAAGTaGGTATTAAGGCCAGGCAGTGATGCTGCACGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRHNQPTSVLLK*VLRPGSDAARL Trigger: AAGGCGTGCAGCATCACTGCCTGGCCTTAATACTCACTTTAATAATACACTTGTGGGTTGATTGTGTCTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR GCA 72 bp | AGAGAAAGTAAGAGTGTTGGTGAAAATCATTTTTGCTaGACTACTCTCGTGTTCACAGGCTGCATCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RESKSVGENHFC*TTLVFTGCICL Trigger: CAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAAAATGATTTTCACCAACACTCTTACTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR GCA 72 bp | ATTTCCAAATTAAGACTTGTAAGAAAGCAAGCCAGGTaGCCCCTGCTTCTGGTTGTGATTGAATTATCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISKLRLVRKQAR*PLLLVVIELSA Trigger: TGCCGATAATTCAATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR TCA 72 bp | TATCAAGTTCCTTTCCTGACGGCATTTCTAACTAGCTaGGGACCTCAAGTCTTTTCTGAAAGAACACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: YQVPFLTAFLTS*GPQVFSERTQT Trigger: TGTCTGTGTTCTTTCAGAAAAGACTTGAGGTCCTCAGCTAGTTAGAAATGCCGTCAGGAAAGGAACTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR GCA 72 bp | GTTAGAGAAAGTAAGAGTGTTGGTGAAAATCATTTTTaGTGCACTACTCTCGTGTTCACAGGCTGCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VRESKSVGENHF*CTTLVFTGCIC Trigger: ACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAAAATGATTTTCACCAACACTCTTACTTTCTCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR GCA 72 bp | ACCCTTTCATGTCTTCCTATCCTTCCTACTCTAGAATaGACTTTCACTTCATCAATGGCTTTCAAACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLSCLPILPTLE*TFTSSMAFKLL Trigger: GAGAAGTTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAGACATGAAAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAGTGGCCAAAGCCATCTaGTGGGAAATATTTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SFKIPNTYCFMCAPILNLVAKAI*WEIFSD Trigger: ATCTGAAAATATTTCCCACAAGATGGCTTTGGCCAC...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR-3UTR CAA 90 bp | AACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGAGAACCACCTGCATTAACACATTTTTaGGTAACCGGTGTAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: NYHENKDHKDPREEREPPALTHF*VTGVGI Trigger: AATACCTACACCGGTTACCAAAAAATGTGTTAATGC...AGGTGGTTCTCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR TCA 72 bp | AATCAGATCTTCCTGTGCAAAACAATTCTATTCTACTaGTGTGCTGGACACTTAAACAATACATCATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NQIFLCKTILFY*CAGHLNNTSCC Trigger: ACAACATGATGTATTGTTTAAGTGTCCAGCACATCAGTAGAATAGAATTGTTTTGCACAGGAAGATCTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGCACCTGCCCCCTCTGTaGGGGCTGCAGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPEHLPPL*GLQSCS Trigger: AGAGCAGCTCTGCAGCCCCCACAGAGGGGGCAGGTG...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCATCCGCCCCCATGTTCTaGGTGGGGGTGATGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSSAPMF*VGVMPE Trigger: CTCGGGCATCACCCCCACTCAGAACATGGGGGCGGA...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTGCACCAGGTGGGAGATaGGGCTCCAGAGCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAAAPGGR*GSRAHS Trigger: TGAGTGGGCTCTGGAGCCGCATCTCCCACCTGGTGC...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGCTCCCACAGGATCCCTaGAGCCACTGTCGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPELPQDP*SHCRSC Trigger: ACATGAGCGACAGTGGCTGCAGGGATCCTGTGGGAG...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGGGGACGCTACAGAGCTaGTCTCCAGGTGTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPEGTLQS*SPGVHL Trigger: CAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCC...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTCAGTCGTCTCCTCAGTaGATCCTGGTTCCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAAQSSPQ*ILVPWT Trigger: GGTCCAGGGAACCAGGATTCACTGAGGAGACGACTG...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCGGTAGCTCAGGCACTTaGGGGTCTCCTTGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSGSSGT*GSPCPL Trigger: GAGAGGGCAAGGAGACCCTCAAGTGCCTGAGCTACC...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGCTCCAGGTGTGCATCTaGTCTTCCTCCCAAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPELQVCI*SSSQVA Trigger: AGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAG...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTTCCCTGGACCTGTGTTaGAATGGCCCAGACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAASLDLC*NGPDSG Trigger: GCCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGA...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGTGGGGTTCGAGGCATTaGGGTGCTTCTGGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPEWGSRH*GASGET Trigger: AGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCA...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCACTCCCACAGGATCCCTaGAGCCACTGTCGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSLPQDP*SHCRSC Trigger: ACATGAGCGACAGTGGCTGCAGGGATCCTGTGGGAG...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCGGGACGCTACAGAGCTaGTCTCCAGGTGTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSGTLQS*SPGVHL Trigger: CAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCC...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGAAGAGGTGTAGGCGTTaGCAACATGGTAGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSCFLSHASHLLAGQSPEKRCRR*QHGSSG Trigger: GCCTGAGCTACCATGTTGCCAACGCCTACACCTCTT...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCATCAGCAAGCAGTTCCTaGCCAGCTTCACCCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSSASSS*PASPLS Trigger: TGACAGGGGTGAAGCTGGTCAGGAACTGCTTGCTGA...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCGTGTCTGTATGCTCCTaGGCTCTGGCCCCTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSVSVCS*ALAPIS Trigger: TGAAATAGGGGCCAGAGCTCAGGAGCATACAGACAC...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTTTCCTCTGGACTTTCTaGCCTGTCACCTGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAAFLWTF*PVTCVC Trigger: ACAGACACAGGTGACAGGTCAGAAAGTCCAGAGGAA...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCATTCAGTTGGCCAAACTaGGCCAGGAAGGCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSFSWPN*ARKASK Trigger: TTTGGAGGCCTTCCTGGCTCAGTTTGGCCAACTGAA...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTGACTGTCAGGACAAGTaGCACATCTTTAAAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAADCQDK*HIFKGG Trigger: GCCGCCTTTAAAGATGTGGCACTTGTCCTGACAGTC...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTCACCTGCCCCCTCTGTaGGGGCTGCAGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSHLPPL*GLQSCS Trigger: AGAGCAGCTCTGCAGCCCCCACAGAGGGGGCAGGTG...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCAACCACAGCAGCCTTGTaGCCATTCTCAAACCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSTTAAL*PFSNPS Trigger: CGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGT...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTACGGGCAGCACCAGGTaGGAGATGCGGCTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSTGSTR*EMRLQS Trigger: GCTCTGGAGCCGCATCTCCCACCTGGTGCTGCCCGT...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTCAGCAAGCAGTTCCTaGCCAGCTTCACCCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPSASSS*PASPLS Trigger: TGACAGGGGTGAAGCTGGTCAGGAACTGCTTGCTGA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTCACAGGAAGGAACTCTaGCCTGGAAATTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAAHRKEL*PGNFSF Trigger: GAAGGAGAAATTTCCAGGTCAGAGTTCCTTCCTGTG...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCAGACTGTCAGGACAAGTaGCACATCTTTAAAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSDCQDK*HIFKGG Trigger: GCCGCCTTTAAAGATGTGGCACTTGTCCTGACAGTC...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTGCACCAGGTGGGAGATaGGGCTCCAGAGCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSAPGGR*GSRAHS Trigger: TGAGTGGGCTCTGGAGCCGCATCTCCCACCTGGTGC...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTGGAAGGGATTCGAAGTaGTGGACCACAGCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPGRDSK*WTTAAL Trigger: CAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCC...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTTCAGTTGGCCAAACTaGGCCAGGAAGGCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPFSWPN*ARKASK Trigger: TTTGGAGGCCTTCCTGGCTCAGTTTGGCCAACTGAA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTGGGGTTCGAGGCATTaGGGTGCTTCTGGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPWGSRH*GASGET Trigger: AGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTCTCATGTTTGTGTTCTaGCTCTTCAGACTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAALMFVF*LFRLWD Trigger: GTCCCAAAGTCTGAAGAGCCAGAACACAAACATGAG...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTCTCCTCAGTGAATCCTaGTTCCCTGGACCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPLLSES*FPGPVL Trigger: CAACACAGGTCCAGGGAACCAGGATTCACTGAGGAG...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTTTCGGCTCCGTCTATaGAGACGGCAGTCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPFRLRL*RRQSPS Trigger: AGAAGGTGACTGCCGTCTCCATAGACGGAGCCGAAA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTCTGGTGTCCTGTGTTTaGGAGTTTATTGATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TPNPAAKSRHDSQEGGAALVSCV*EFIDGS Trigger: TGATCCATCAATAAACTCTCAAACACAGGACACCAG...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGAGAACCACCTGGGTCCTTGACATTTCTGCTTCTACACAGGCACTGCTAGGGAACCACTGCTaGCCACAATCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKRTTWVLDISASTQALLGNHC*PQSGQC Trigger: ACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAG...CAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCTTCGAGGCATTGAGGTaGTTCTGGAGAAACTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSFEALR*FWRNLR Trigger: ACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAA...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATGGACCTGTGTTGGAATaGCCCAGACTCTGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: FAALLSCSQAASVCHSQHGPVLE*PRLWPS Trigger: CGATGGCCAGAGTCTGGGCCATTCCAACACAGGTCC...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTTCCCTGGACCTGTGTTaGAATGGCCCAGACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSSLDLC*NGPDSG Trigger: GCCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGA...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTTCTGTCTCCTCTTCATaGCTTCCAGCCTCGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSSVSSS*LPASGT Trigger: TGTGCCCGAGGCTGGAAGTCATGAAGAGGAGACAGA...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTCACAGGAAGGAACTCTaGCCTGGAAATTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPHRKEL*PGNFSF Trigger: GAAGGAGAAATTTCCAGGTCAGAGTTCCTTCCTGTG...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCCTGGCCCCTATTTCATaGTGGTCTTCTTTAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSLAPIS*WSSLRS Trigger: TGATCTTAAAGAAGACCACCATGAAATAGGGGCCAG...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTGGAAGGGATTCGAAGTaGTGGACCACAGCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSGRDSK*WTTAAL Trigger: CAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCC...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGCTAGGGAACCACTGCTaGCCACAATCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLLGNHC*PQSGQC Trigger: ACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAG...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCAGCCCCTATTTCATGGTaGTCTTCTTTAAGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TERDKSSRPCPTPSSSSSAPISW*SSLRSD Trigger: ATCTGATCTTAAAGAAGACCACCATGAAATAGGGGC...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTCTCCTCAGTGAATCCTaGTTCCCTGGACCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSLLSES*FPGPVL Trigger: CAACACAGGTCCAGGGAACCAGGATTCACTGAGGAG...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCTTTCTTCTATTTCCCTaGGGCTTACACTTGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSTERDKSSRPCPTPSSSFLLFP*GLHLLL Trigger: TAGAAGCAAGTGTAAGCCCCAGGGAAATAGAAGAAA...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| 3UTR CAA 72 bp | AAAGACCCTAGAGAGGAAAGAGAACCACCTGGGTCCTaGACATTTCTGCTTCTACACAGGCACTGGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: KDPREEREPPGS*TFLLLHRHWIT Trigger: GGTGATCCAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCTCTAGGGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGCACCTGGTAAGATTTTaGGGTGCCCACTCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLHLVRF*GAHSSG Trigger: CCCACTTGAGTGGGCACCTCAAAATCTTACCAGGTG...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCATGGGAGGACACTGAGTTCACTCACCACAAGACAAGACAGTCTTTGGTTCACCTGGTAAGATTTTaGGGTGCCCACTCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPWEDTEFTHHKTRQSLVHLVRF*GAHSSG Trigger: CCCACTTGAGTGGGCACCTCAAAATCTTACCAGGTG...AACCAAAGACTGTCTTGTCTTGTGGTGAGTGAACTCAGTGTCCTCCCATGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTATCCGCCCCCATGTTCTaGGTGGGGGTGATGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLSAPMF*VGVMPE Trigger: CTCGGGCATCACCCCCACTCAGAACATGGGGGCGGA...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | CAAATTAAGACTTGTAAGAAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATAAACTAGGGAACCACTaGTGCCCACAATCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIKTCKKASQVPPASGCDKLGNH*CPQSGQ Trigger: CTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAGTTT...ATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATGCATTGAGGTGCTTCTaGAGAAACTTACGTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FAALLSCSQAASVCHSQHALRCF*RNLRPR Trigger: GCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGC...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGATCACCTGGTAAGATTTTaGGGTGCCCACTCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMFPGAFSKLLNSKSDHLVRF*GAHSSG Trigger: CCCACTTGAGTGGGCACCTCAAAATCTTACCAGGTG...ATCAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCCGTGCTCACAGTGCTCCTTTTCTTCTATTTCCCTaGGGCTTACACTTGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHRLHLSVIANIRAHSAPFLLFP*GLHLLL Trigger: TAGAAGCAAGTGTAAGCCCCAGGGAAATAGAAGAAA...AGGAGCACTGTGAGCACGGATGTTGGCTATGACAGACAGATGCAGCCTGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAACGGGCAGCACCAGGTaGGAGATGCGGCTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKTGSTR*EMRLQS Trigger: GCTCTGGAGCCGCATCTCCCACCTGGTGCTGCCCGT...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACAGTCGTCTCCTCAGTaGATCCTGGTTCCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKQSSPQ*ILVPWT Trigger: GGTCCAGGGAACCAGGATTCACTGAGGAGACGACTG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAGGTAGCTCAGGCACTTaGGGGTCTCCTTGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLGSSGT*GSPCPL Trigger: GAGAGGGCAAGGAGACCCTCAAGTGCCTGAGCTACC...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | AACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGAGAACCACCTCTAGGGAACCACTGCTaGCCACAATCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NYHENKDHKDPREEREPPLGNHC*PQSGQC Trigger: ACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAG...AGGTGGTTCTCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGGGCCTCCCCTCCAGGACTACATTATCTTGTCAATACTTAGGTTGTGGTGGTAAGATTTTGAGGTaGCCACTCAAGTGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWGLPSRTTLSCQYLGCGGKILR*PLKWER Trigger: TCTTTCCCACTTGAGTGGGCACCTCAAAATCTTACC...ACCACAACCTAAGTATTGACAAGATAATGTAGTCCTGGAGGGGAGGCCCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTCCTCTAGAGTCTGAGGTAGCATGGGTCAAAGGCCAACATGACAGTTTCGAGGCATTGAGGTaGTTCTGGAGAAACTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: VDIPLESEVAWVKGQHDSFEALR*FWRNLR Trigger: ACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAA...ACTGTCATGTTGGCCTTTGACCCATGCTACCTCAGACTCTAGAGGAATGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAGAGAACCACCTGGGTCCTTGACATTTCTGCTTCTACACAGGCACTGTCAACAAGTTCAGTTTaGTACAACCAGTGCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKRTTWVLDISASTQALSTSSV*YNQCPS Trigger: ACTAGGGCACTGGTTGTACCAAACTGAACTTGTTGA...CAGTGCCTGTGTAGAAGCAGAAATGTCAAGGACCCAGGTGGTTCTCTTTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCTCATGTTTGTGTTCTaGCTCTTCAGACTTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FAALLSCSQAASVCHSQHLMFVF*LFRLWD Trigger: GTCCCAAAGTCTGAAGAGCCAGAACACAAACATGAG...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | CAAATTAAGACTTGTAAGAAAGCAAGCCAGGTGCCCCCTGCTTCTGGTTGTGATGTTTGGTACAACCAGTaGCCTAGTTCTAAACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QIKTCKKASQVPPASGCDVWYNQ*PSSKLG Trigger: CCCTAGTTTAGAACTAGGGCACTGGTTGTACCAAAC...ATCACAACCAGAAGCAGGGGGCACCTGGCTTGCTTTCTTACAAGTCTTAATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGGTTTGGTACAACCAGTaGCCTAGTTCTAAACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLVWYNQ*PSSKLG Trigger: CCCTAGTTTAGAACTAGGGCACTGGTTGTACCAAAC...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAGCTGCTCTCCAGGTGTaGATCTGCTCTTCCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKAALQV*ICSSSQ Trigger: TTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGC...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | AACATGGGGCCTCCCCTCCAGGACTACATTATCTTGTCAATACTTAGGTTGTGGTCAACAAGTTCAGTTTaGTACAACCAGTGCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMGPPLQDYIILSILRLWSTSSV*YNQCPS Trigger: ACTAGGGCACTGGTTGTACCAAACTGAACTTGTTGA...CCACAACCTAAGTATTGACAAGATAATGTAGTCCTGGAGGGGAGGCCCCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| 3UTR CAA 72 bp | GATTCCTCTTTCTGTTCCCTACAGGAGACCTTCCCCTaGTGTTTATCAAGTTCCTTTCCTGACGGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSFCSLQETFP*CLSSSFPDGIS Trigger: AGAAATGCCGTCAGGAAAGGAACTTGATAAACACAAGGGGAAGGTCTCCTGTAGGGAACAGAAAGAGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTATCTGTCTCCTCTTCATaGCTTCCAGCCTCGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLSVSSS*LPASGT Trigger: TGTGCCCGAGGCTGGAAGTCATGAAGAGGAGACAGA...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACCCACTCAGTTTGTCTaGGTCCATGTGGCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKPTQFV*VHVAVG Trigger: TCCTACAGCCACATGGACTCAGACAAACTGAGTGGG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTACTCCAGGTGTGCATCTaGTCTTCCTCCCAAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLLQVCI*SSSQVA Trigger: AGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAG...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGTCAACAAGTTCAGTTTaGTACAACCAGTGCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLSTSSV*YNQCPS Trigger: ACTAGGGCACTGGTTGTACCAAACTGAACTTGTTGA...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAAAGAGGTGTAGGCGTTaGCAACATGGTAGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKKRCRR*QHGSSG Trigger: GCCTGAGCTACCATGTTGCCAACGCCTACACCTCTT...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAACCACAGCAGCCTTGTaGCCATTCTCAAACCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKTTAAL*PFSNPS Trigger: CGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGT...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAGTGTCTGTATGCTCCTaGGCTCTGGCCCCTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLVSVCS*ALAPIS Trigger: TGAAATAGGGGCCAGAGCTCAGGAGCATACAGACAC...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | TCACCTAGAATCTTAAGTGAAAATTTAACAATGTCCAGTGGCTTCTCAGATGTTCTAGGGAACCACTGCTaGCCACAATCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRILSENLTMSSGFSDVLGNHC*PQSGQC Trigger: ACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAG...AACATCTGAGAAGCCACTGGACATTGTTAAATTTTCACTTAAGATTCTAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAGCTGCTCTCCAGCTCTaGTTTATCCAGTGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKAALQL*FIQWRF Trigger: AAACCTCCACTGGATAAAGCAGAGCTGGAGAGCAGC...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAGCTGCTCTCCAGGTGTaGATCTGCTCTTCCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKAALQV*ICSSSQ Trigger: TTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGC...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAAGCATTGAGGTGCTTCTaGAGAAACTTACGTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPILPTLECTFTSSMAFKALRCF*RNLRPR Trigger: GCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGC...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTATTTCGGCTCCGTCTATaGAGACGGCAGTCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLFRLRL*RRQSPS Trigger: AGAAGGTGACTGCCGTCTCCATAGACGGAGCCGAAA...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR TCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAACCCACTCAGTTTGTCTaGGTCCATGTGGCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKPTQFV*VHVAVG Trigger: TCCTACAGCCACATGGACTCAGACAAACTGAGTGGG...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAGCTGCTCTCCAGCTCTaGTTTATCCAGTGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLAALQL*FIQWRF Trigger: AAACCTCCACTGGATAAAGCAGAGCTGGAGAGCAGC...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | GTCTTTCTCAGACTAGTGCATGAATCAGTACCTGCTCATGAGAGTAAAACAAAAGGTAAGATTTTGAGGTaGCCACTCAAGTGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLRLVHESVPAHESKTKGKILR*PLKWER Trigger: TCTTTCCCACTTGAGTGGGCACCTCAAAATCTTACC...TTTTGTTTTACTCTCATGAGCAGGTACTGATTCATGCACTAGTCTGAGAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000128941.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTACTGGTGTCCTGTGTTTaGGAGTTTATTGATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLLVSCV*EFIDGS Trigger: TGATCCATCAATAAACTCTCAAACACAGGACACCAG...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR GCA 90 bp | TCACCTAGAATCTTAAGTGAAAATTTAACAATGTCCAGTGGCTTCTCAGATGTTGTTTGGTACAACCAGTaGCCTAGTTCTAAACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRILSENLTMSSGFSDVVWYNQ*PSSKLG Trigger: CCCTAGTTTAGAACTAGGGCACTGGTTGTACCAAAC...AACATCTGAGAAGCCACTGGACATTGTTAAATTTTCACTTAAGATTCTAGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTAAAAACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGAGTTTGGTACAACCAGTaGCCTAGTTCTAAACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFKNYHENKDHKDPREERVWYNQ*PSSKLG Trigger: CCCTAGTTTAGAACTAGGGCACTGGTTGTACCAAAC...TCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTTTTTAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTAAAAACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGAGGTAAGATTTTGAGGTaGCCACTCAAGTGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFKNYHENKDHKDPREERGKILR*PLKWER Trigger: TCTTTCCCACTTGAGTGGGCACCTCAAAATCTTACC...TCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTTTTTAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTAGAATCTTAAGTGAAAATTTAACAATGTCCAGTGGCTTCTCAGATGTTGGTAAGATTTTGAGGTaGCCACTCAAGTGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRILSENLTMSSGFSDVGKILR*PLKWER Trigger: TCTTTCCCACTTGAGTGGGCACCTCAAAATCTTACC...AACATCTGAGAAGCCACTGGACATTGTTAAATTTTCACTTAAGATTCTAGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTACTGGCCCCTATTTCATaGTGGTCTTCTTTAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIPNTYCFMCAPILNLLAPIS*WSSLRS Trigger: TGATCTTAAAGAAGACCACCATGAAATAGGGGCCAG...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAAGCCCCTATTTCATGGTaGTCTTCTTTAAGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKAPISW*SSLRSD Trigger: ATCTGATCTTAAAGAAGACCACCATGAAATAGGGGC...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS GCA 90 bp | CAGCTTCACCCCTGTCACCTGCTCCCTCTGGGGACGCTACAGAGCTaGTCTCCAGGTGTGCATCTGCTCTTCCTCCCAAGTCGCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLHPCHLLPLGTLQS*SPGVHLLFLPSRFE Trigger: CTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCAGAGGGAGCAGGTGACAGGGGTGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | CCCAGCTGTTTCCTCTCACATGCCAGTCACCTCCTAGCGGGACAGAGCCCTGAGTTCCCTGGACCTGTGTaGGAATGGCCCAGACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCFLSHASHLLAGQSPEFPGPV*EWPRLW Trigger: CCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGAA...CTCAGGGCTCTGTCCCGCTAGGAGGTGACTGGCATGTGAGAGGAAACAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 90 bp | CCGGGTTCTGGGGCACCTGCTGGGCTGGGGAAGAATAGTAGCTGTTaGCGGAGCTTAGCACAACAGCCACGATCAGGCAGCCGAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PGSGAPAGLGKNSSC*RSLAQQPRSGSRET Trigger: TGTTTCTCGGCTGCCTGATCGTGGCTGTTGTGCTAAGCTCCGTCAACAGCTACTATTCTTCCCCAGCCCAGCAGGTGCCCCAGAACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 90 bp | GAGCTGCTCTCCAGGTGTGCATCTGCTCTTCCTCCCAAGTCGCTTTaGGAGCAGTTAGGATCCAGATCTAGGGCGTCTCCGCCCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: ELLSRCASALPPKSL*EQLGSRSRASPPPC Trigger: ACATGGGGGCGGAGACGCCCTAGATCTGGATCCTAACTGCTCTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 90 bp | CTGAGTGGGGGTGATGCCCGAGCTCTGTGTCCTGAGAACTCGGGCTaGTCTCCAGCTCTGCTTTATCCAGTGGAGGTTTCTCTAACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGGDARALCPENSG*SPALLYPVEVSLTL Trigger: CAGCGTTAGAGAAACCTCCACTGGATAAAGCAGAGCTGGAGAGCAGCCCGAGTTCTCAGGACACAGAGCTCGGGCATCACCCCCACTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 90 bp | GTCACCTGCTCCCTCTGGGGACGCTACAGAGCTGCTCTCCAGGTGTaGATCTGCTCTTCCTCCCAAGTCGCTTTGAGAGCAGTTAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VTCSLWGRYRAALQV*ICSSSQVALRAVRI Trigger: GATCCTAACTGCTCTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCAGAGGGAGCAGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 90 bp | TCGCTAAGCTCCAAGTCAACCAGCAGCTTGACTGTGTCACTGTCCTaGAGGGCCCTTTCGGCTCCGTCTATGGAGACGGCAGTCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSKSTSSLTVSLS*RALSAPSMETAVTF Trigger: GAAGGTGACTGCCGTCTCCATAGACGGAGCCGAAAGGGCCCTGCAGGACAGTGACACAGTCAAGCTGCTGGTTGACTTGGAGCTTAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CCA 90 bp | GAGCCGGCAGGAAGGGATTCGAAGTGGTGGACCACAGCAGCCTTGTaGCCATTCTCAAACCCATCGCTAAGCTCCAAGTCAACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPAGRDSKWWTTAAL*PFSNPSLSSKSTSS Trigger: GCTGCTGGTTGACTTGGAGCTTAGCGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCCTGCCGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 90 bp | TGCTCCCTCTGGGGACGCTACAGAGCTGCTCTCCAGGTGTGCATCTaGTCTTCCTCCCAAGTCGCTTTGAGAGCAGTTAGGATCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CSLWGRYRAALQVCI*SSSQVALRAVRIQI Trigger: GATCTGGATCCTAACTGCTCTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCAGAGGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 90 bp | GTGAAGATGATGGTGGCCGGCTCACTGGGGTTCGAGGCATTGAGGTaGTTCTGGAGAAACTTACGTCCTCGCTGCCACAGGAAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VKMMVAGSLGFEALR*FWRNLRPRCHRKEL Trigger: GAGTTCCTTCCTGTGGCAGCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAGTGAGCCGGCCACCATCATCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | ACCCCAAACCCAGCAGCCAAGAGCAGGCATGATTCACAGGAAGGAGGGGCTGCTTCCTCCCAAGTCGCTTaGAGAGCAGTTAGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPNPAAKSRHDSQEGGAASSQVA*RAVRIQ Trigger: CTGGATCCTAACTGCTCTCAAAGCGACTTGGGAGGA...AGCAGCCCCTCCTTCCTGTGAATCATGCCTGCTCTTGGCTGCTGGGTTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCACTGGGGTTCGAGGCATaGAGGTGCTTCTGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TERDKSSRPCPTPSSSSSLGFEA*RCFWRN Trigger: GTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAG...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | AGATCCACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCTGGACCACAGCAGCCTaGTGGCCATTCTCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSTERDKSSRPCPTPSSSWTTAA*WPFSNP Trigger: TGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCA...GCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGTGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | ACAGAAAGGGACAAAAGCTCACGGCCCTGCCCTACACCCTCCAGTAGCAGCTCACACTGTCGCTCATGTTaGTGTTCTGGCTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TERDKSSRPCPTPSSSSSHCRSC*CSGSSD Trigger: GTCTGAAGAGCCAGAACACAAACATGAGCGACAGTG...TGAGCTGCTACTGGAGGGTGTAGGGCAGGGCCGTGAGCTTTTGTCCCTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 90 bp | TGTGCAACCTCTTGCTTTTCCTTCACCAACTCTGTCTCCTCTTCATaGCTTCCAGCCTCGGGCACAGGCAGTCGTCTCCTCAGTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: CATSCFSFTNSVSSS*LPASGTGSRLLSES Trigger: GGATTCACTGAGGAGACGACTGCCTGTGCCCGAGGCTGGAAGTCATGAAGAGGAGACAGAGTTGGTGAAGGAAAAGCAAGAGGTTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | CCTTGGTTTAACTTAGTGGAAGAGCACTTGCCTAGCATGCACAAGGCACCCAGACCACCTGGTAAGATTTaGAGGTGCCCACTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWFNLVEEHLPSMHKAPRPPGKI*RCPLKW Trigger: CCACTTGAGTGGGCACCTCAAAATCTTACCAGGTGG...TCTGGGTGCCTTGTGCATGCTAGGCAAGTGCTCTTCCACTAAGTTAAACCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATCAGAGCCCACTCAGTTaGTCTGAGTCCATGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAALLSCSQAASVCHSQHQSPLS*SESMWL Trigger: CAGCCACATGGACTCAGACAAACTGAGTGGGCTCTG...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | ACATGGGGCCTCCCCTCCAGGACTACATTATCTTGTCAATACTTAGGTTGTGGTCCACCTGGTAAGATTTaGAGGTGCCCACTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TWGLPSRTTLSCQYLGCGPPGKI*RCPLKW Trigger: CCACTTGAGTGGGCACCTCAAAATCTTACCAGGTGG...ACCACAACCTAAGTATTGACAAGATAATGTAGTCCTGGAGGGGAGGCCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATTCCTCCCAAGTCGCTTaGAGAGCAGTTAGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FAALLSCSQAASVCHSQHSSQVA*RAVRIQ Trigger: CTGGATCCTAACTGCTCTCAAAGCGACTTGGGAGGA...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 90 bp | GGTTCCTCTGGACTTTCTGACCTGTCACCTGTGTCTGTATGCTCCTaGGCTCTGGCCCCTATTTCATGGTGGTCTTCTTTAAGATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSGLSDLSPVSVCS*ALAPISWWSSLRSD Trigger: ATCTGATCTTAAAGAAGACCACCATGAAATAGGGGCCAGAGCTCAGGAGCATACAGACACAGGTGACAGGTCAGAAAGTCCAGAGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCTGCTTAACTCCAAATCTGCCACCTGGTAAGATTTaGAGGTGCCCACTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLLRCSQEPFLSCLTPNLPPGKI*RCPLKW Trigger: CCACTTGAGTGGGCACCTCAAAATCTTACCAGGTGG...CAGATTTGGAGTTAAGCAGCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTGCACTACTCTCGTGTTCACAGGCTGCATCTGTCTGTCATAGCCAACATATCCTGTGCAACCTCTaGCTTTTCCTTCACCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: FAALLSCSQAASVCHSQHILCNL*LFLHQL Trigger: GAGTTGGTGAAGGAAAAGCAAGAGGTTGCACAGGAT...ATGTTGGCTATGACAGACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | AAATTTAACAATGTCCAGTGGCTTCTCAGATGTTCCCAGGAGCCTTTTCTAAGCCCACCTGGTAAGATTTaGAGGTGCCCACTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KFNNVQWLLRCSQEPFLSPPGKI*RCPLKW Trigger: CCACTTGAGTGGGCACCTCAAAATCTTACCAGGTGG...GCTTAGAAAAGGCTCCTGGGAACATCTGAGAAGCCACTGGACATTGTTAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACAGAGCCCACTCAGTTaGTCTGAGTCCATGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPILPTLECTFTSSMAFKQSPLS*SESMWL Trigger: CAGCCACATGGACTCAGACAAACTGAGTGGGCTCTG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | GTGTTGACAGGAAACTATGTAAGGCTGTCGTTTTACATAGTTTTAATGAGGAAATTCCCTGGACCTGTGTaGGAATGGCCCAGACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTGNYVRLSFYIVLMRKFPGPV*EWPRLW Trigger: CCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGAA...TTTCCTCATTAAAACTATGTAAAACGACAGCCTTACATAGTTTCCTGTCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTACTGGGGTTCGAGGCATaGAGGTGCTTCTGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFKIPNTYCFMCAPILNLLGFEA*RCFWRN Trigger: GTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAG...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTATGGACCACAGCAGCCTaGTGGCCATTCTCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFKIPNTYCFMCAPILNLWTTAA*WPFSNP Trigger: TGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCA...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | CTTCCTATCCTTCCTACTCTAGAATGCACTTTCACTTCATCAATGGCTTTCAAACACTGTCGCTCATGTTaGTGTTCTGGCTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPILPTLECTFTSSMAFKHCRSC*CSGSSD Trigger: GTCTGAAGAGCCAGAACACAAACATGAGCGACAGTG...TTTGAAAGCCATTGATGAAGTGAAAGTGCATTCTAGAGTAGGAAGGATAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | TCCTTCAAAATCCCAAATACATACTGTTTCATGTGTGCCCCCATACTTAACTTAATCCTGTGCAACCTCTaGCTTTTCCTTCACCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SFKIPNTYCFMCAPILNLILCNL*LFLHQL Trigger: GAGTTGGTGAAGGAAAAGCAAGAGGTTGCACAGGAT...TAAGTTAAGTATGGGGGCACACATGAAACAGTATGTATTTGGGATTTTGAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS-3UTR CAA 90 bp | CCATTTAAAAACTATCATGAGAACAAAGACCATAAAGACCCTAGAGAGGAAAGACTTTGGCCAAGTTTCTaGTTTAAGGTTTTGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFKNYHENKDHKDPREERLWPSF*FKVLSV Trigger: AACAGACAAAACCTTAAACAAGAAACTTGGCCAAAG...TCTTTCCTCTCTAGGGTCTTTATGGTCTTTGTTCTCATGATAGTTTTTAAATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS GCA 72 bp | CCCTGTCACCTGCTCCCTCTGGGGACGCTACAGAGCTaGTCTCCAGGTGTGCATCTGCTCTTCCTCCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PCHLLPLGTLQS*SPGVHLLFLPS Trigger: ACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCAGAGGGAGCAGGTGACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 72 bp | ACTTCCAGCCTCGGGCACAGGCAGTCGTCTCCTCAGTaGATCCTGGTTCCCTGGACCTGTGTTGGAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSLGHRQSSPQ*ILVPWTCVGMA Trigger: GGCCATTCCAACACAGGTCCAGGGAACCAGGATTCACTGAGGAGACGACTGCCTGTGCCCGAGGCTGGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 72 bp | GGGGCACCTGCTGGGCTGGGGAAGAATAGTAGCTGTTaGCGGAGCTTAGCACAACAGCCACGATCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPAGLGKNSSC*RSLAQQPRSGS Trigger: GCTGCCTGATCGTGGCTGTTGTGCTAAGCTCCGTCAACAGCTACTATTCTTCCCCAGCCCAGCAGGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 72 bp | ATGGTGGCCGGCTCACTGGGGTTCGAGGCATTGAGGTaGTTCTGGAGAAACTTACGTCCTCGCTGCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: MVAGSLGFEALR*FWRNLRPRCHR Trigger: CCTGTGGCAGCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAGTGAGCCGGCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CCA 72 bp | TGTCACTGTCCTGCAGGGCCCTTTCGGCTCCGTCTATaGAGACGGCAGTCACCTTCTGGGAAGAGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CHCPAGPFRLRL*RRQSPSGKRCR Trigger: CCTACACCTCTTCCCAGAAGGTGACTGCCGTCTCCATAGACGGAGCCGAAAGGGCCCTGCAGGACAGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CAA 90 bp | GCAGCTGTGAAGATGATGGTGGCCGGCTCACTGGGGTTCGAGGCATaGAGGTGCTTCTGGAGAAACTTACGTCCTCGCTGCCACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAVKMMVAGSLGFEA*RCFWRNLRPRCHRK Trigger: CTTCCTGTGGCAGCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAGTGAGCCGGCCACCATCATCTTCACAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS CAA 90 bp | GTGGAGCCGGCAGGAAGGGATTCGAAGTGGTGGACCACAGCAGCCTaGTGGCCATTCTCAAACCCATCGCTAAGCTCCAAGTCAACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VEPAGRDSKWWTTAA*WPFSNPSLSSKSTS Trigger: GCTGGTTGACTTGGAGCTTAGCGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCCTGCCGGCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS GCA 72 bp | TCCCTCTGGGGACGCTACAGAGCTGCTCTCCAGGTGTaGATCTGCTCTTCCTCCCAAGTCGCTTTGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLWGRYRAALQV*ICSSSQVALRA Trigger: TGCTCTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCAGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS GCA 72 bp | TCCAAGTCAACCAGCAGCTTGACTGTGTCACTGTCCTaGAGGGCCCTTTCGGCTCCGTCTATGGAGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SKSTSSLTVSLS*RALSAPSMETA Trigger: TGCCGTCTCCATAGACGGAGCCGAAAGGGCCCTGCAGGACAGTGACACAGTCAAGCTGCTGGTTGACTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS CCA 72 bp | GCCGGCTCACTGGGGTTCGAGGCATTGAGGTGCTTCTaGAGAAACTTACGTCCTCGCTGCCACAGGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AGSLGFEALRCF*RNLRPRCHRKE Trigger: TTCCTTCCTGTGGCAGCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAGTGAGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS CAA 90 bp | ACAGGCAGTCGTCTCCTCAGTGAATCCTGGTTCCCTGGACCTGTGTaGGAATGGCCCAGACTCTGGCCATCGGTAGAGTCTTCAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGSRLLSESWFPGPV*EWPRLWPSVESSAS Trigger: GCTTGCTGAAGACTCTACCGATGGCCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGAACCAGGATTCACTGAGGAGACGACTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS CAA 90 bp | TCGCTGCCACAGGAAGGAACTCTGACCTGGAAATTTCTCCTTCAGTaGGCCAAACTGAGCCAGGAAGGCCTCCAAAGCCGGGTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLPQEGTLTWKFLLQ*AKLSQEGLQSRVLG Trigger: CCCCAGAACCCGGCTTTGGAGGCCTTCCTGGCTCAGTTTGGCCAACTGAAGGAGAAATTTCCAGGTCAGAGTTCCTTCCTGTGGCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS GCA 72 bp | GGTGATGCCCGAGCTCTGTGTCCTGAGAACTCGGGCTaGTCTCCAGCTCTGCTTTATCCAGTGGAGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GDARALCPENSG*SPALLYPVEVS Trigger: AGAAACCTCCACTGGATAAAGCAGAGCTGGAGAGCAGCCCGAGTTCTCAGGACACAGAGCTCGGGCATCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS GCA 72 bp | TGGGGACGCTACAGAGCTGCTCTCCAGGTGTGCATCTaGTCTTCCTCCCAAGTCGCTTTGAGAGCAGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: WGRYRAALQVCI*SSSQVALRAVR Trigger: CCTAACTGCTCTCAAAGCGACTTGGGAGGAAGAGCAGATGCACACCTGGAGAGCAGCTCTGTAGCGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
||
| CDS CAA 72 bp | CGTCTCCTCAGTGAATCCTGGTTCCCTGGACCTGTGTaGGAATGGCCCAGACTCTGGCCATCGGTAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLLSESWFPGPV*EWPRLWPSVES Trigger: AGACTCTACCGATGGCCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGAACCAGGATTCACTGAGGAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CAA 72 bp | AAGATGATGGTGGCCGGCTCACTGGGGTTCGAGGCATaGAGGTGCTTCTGGAGAAACTTACGTCCTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KMMVAGSLGFEA*RCFWRNLRPRC Trigger: GCAGCGAGGACGTAAGTTTCTCCAGAAGCACCTCAATGCCTCGAACCCCAGTGAGCCGGCCACCATCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CAA 90 bp | TGGCCATTCTCAAACCCATCGCTAAGCTCCAAGTCAACCAGCAGCTaGACTGTGTCACTGTCCTGCAGGGCCCTTTCGGCTCCGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: WPFSNPSLSSKSTSS*TVSLSCRALSAPSM Trigger: CATAGACGGAGCCGAAAGGGCCCTGCAGGACAGTGACACAGTCAAGCTGCTGGTTGACTTGGAGCTTAGCGATGGGTTTGAGAATGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CCA 72 bp | CTCAGTGAATCCTGGTTCCCTGGACCTGTGTTGGAATaGCCCAGACTCTGGCCATCGGTAGAGTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSESWFPGPVLE*PRLWPSVESSA Trigger: TGCTGAAGACTCTACCGATGGCCAGAGTCTGGGCCATTCCAACACAGGTCCAGGGAACCAGGATTCACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CAA 72 bp | GCAGGAAGGGATTCGAAGTGGTGGACCACAGCAGCCTaGTGGCCATTCTCAAACCCATCGCTAAGCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: AGRDSKWWTTAA*WPFSNPSLSSK Trigger: CTTGGAGCTTAGCGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CCA 72 bp | GGAAGGGATTCGAAGTGGTGGACCACAGCAGCCTTGTaGCCATTCTCAAACCCATCGCTAAGCTCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GRDSKWWTTAAL*PFSNPSLSSKS Trigger: TGACTTGGAGCTTAGCGATGGGTTTGAGAATGGCCACAAGGCTGCTGTGGTCCACCACTTCGAATCCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS TCA 72 bp | GCTGTAGGGGCTGGGCTTCTGCAGTGTTATTCGGTGTaGCTCTGGTGTCCTGTGTTTGAGAGTTTATTGATG | + |
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Preference number: 6 (lower is better) Translates to: AVGAGLLQCYSV*LWCPVFESLLM Trigger: CATCAATAAACTCTCAAACACAGGACACCAGAGTCACACCGAATAACACTGCAGAAGCCCAGCCCCTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 72 bp | AACCAGTGCCCTAGTTCTAAACTAGGGAACCACTGCTaGCCACAATCAGGGCAGTGTGAATTATCGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: NQCPSSKLGNHC*PQSGQCELSEN Trigger: GTTCTCCGATAATTCACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAGTTTAGAACTAGGGCACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS GCA 72 bp | TACAACCAGTGCCCTAGTTCTAAACTAGGGAACCACTaGTGCCCACAATCAGGGCAGTGTGAATTATCGGAG | + |
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Preference number: 6 (lower is better) Translates to: YNQCPSSKLGNH*CPQSGQCELSE Trigger: CTCCGATAATTCACACTGCCCTGATTGTGGGCAGCAGTGGTTCCCTAGTTTAGAACTAGGGCACTGGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS GCA 72 bp | TTTCCAAAACATTTTGTGAGTCTCCCACAGGATCCCTaGAGCCACTGTCGCTCATGTTTGTGTTCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FPKHFVSLPQDP*SHCRSCLCSGS Trigger: AGAGCCAGAACACAAACATGAGCGACAGTGGCTGCAGGGATCCTGTGGGAGACTCACAAAATGTTTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS GCA 72 bp | CATTCATTTTCAACAAGTTCAGTTTGGTACAACCAGTaGCCTAGTTCTAAACTAGGGAACCACTGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: HSFSTSSVWYNQ*PSSKLGNHCCP Trigger: TGGGCAGCAGTGGTTCCCTAGTTTAGAACTAGGGCACTGGTTGTACCAAACTGAACTTGTTGAAAATGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065648.15 ENSMUST00000097526.3 ENSMUST00000111754.9 ENSMUST00000128941.8 |
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| CDS CAA 90 bp | GAGACTCTTTTTATCAGTCTTTCTCAATGTATCCTGTGCAACCTCTaGCTTTTCCTTCACCAACTCTGTCTCCTCTTCATGACTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ETLFISLSQCILCNL*LFLHQLCLLFMTSS Trigger: GCTGGAAGTCATGAAGAGGAGACAGAGTTGGTGAAGGAAAAGCAAGAGGTTGCACAGGATACATTGAGAAAGACTGATAAAAAGAGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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| CDS CAA 72 bp | TTTATCAGTCTTTCTCAATGTATCCTGTGCAACCTCTaGCTTTTCCTTCACCAACTCTGTCTCCTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: FISLSQCILCNL*LFLHQLCLLFM Trigger: CATGAAGAGGAGACAGAGTTGGTGAAGGAAAAGCAAGAGGTTGCACAGGATACATTGAGAAAGACTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060404.5 ENSMUST00000111757.10 |
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