Pregenerated sensors for TOR1AIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026466Ensembl transcript IDs: ENSMUST00000027738.14, ENSMUST00000097527.10, ENSMUST00000123705.8, ENSMUST00000130995.4, ENSMUST00000136331.8, ENSMUST00000136397.8, ENSMUST00000141878.8, ENSMUST00000169241.8
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCTGCTTTCAGAGTGTTCTCAGGCTGCACAGGCAGCACGAGGTaGGAGATGCGGCTCCAGAGCCCATTCAGCTTGTCTGGGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: LPAFRVFSGCTGSTR*EMRLQSPFSLSGSM Trigger: CATGGACCCAGACAAGCTGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCTGAAAGCAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR CCA 90 bp | CGAGGTCACTGTCCTGAGCAGCTTTACCTGCCCCGTCAATCCGGATaGCACGGACACTACGGAAGGAGGAGTAGGCGTCGGCAATTTGTT | + |
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Preference number: 1 (lower is better) Translates to: RGHCPEQLYLPRQSG*HGHYGRRSRRRQFV Trigger: AACAAATTGCCGACGCCTACTCCTCCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 90 bp | GCTCAAACCCGAGATGGCTTTCCGCTTCTCTCCCTCATAAGCAGCTaGCTGCTTTCAGAGTGTTCTCAGGCTGCACAGGCAGCACGAGGT | + |
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Preference number: 1 (lower is better) Translates to: AQTRDGFPLLSLISS*LLSECSQAAQAARG Trigger: ACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCTGAAAGCAGGCAGCTGCTTATGAGGGAGAGAAGCGGAAAGCCATCTCGGGTTTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 90 bp | GGAGTAGGCGTCGGCAATTTGTTCACTCAGACACTTGAGCACTTCTaGAGCATCTTGAGCTGCAGTGAGCAACAGGATGGCAGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GVGVGNLFTQTLEHF*SILSCSEQQDGRLG Trigger: CCCCAGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 90 bp | ATCGACTTCATGCTTAACGAGGTCACTGTCCTGAGCAGCTTTACCTaGCCCGTCAATCCGGATGGCACGGACACTACGGAAGGAGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: IDFMLNEVTVLSSFT*PVNPDGTDTTEGGV Trigger: TACTCCTCCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCGTTAAGCATGAAGTCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR TCA 90 bp | AGTCCCAGCAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTaGTGGATAGCCGATTGTGGCCTGGAGGTTGATGGAGACTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: SPSSHHFILTEGSFG*WIADCGLEVDGDWF Trigger: AAACCAGTCTCCATCAACCTCCAGGCCACAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTGCTGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| 3UTR CCA 90 bp | GACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGATaGTCACCAGGAGAACACGTGACCAGCTGGTGTGGGATCTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: DMSYLTSKCVSTARG*SPGEHVTSWCGISG Trigger: ACCTGAGATCCCACACCAGCTGGTCACGTGTTCTCCTGGTGACCATCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR CCA 90 bp | ATTCCATCTCTGGTTACAAGGTCTCAAAACCGCTCAAACCCGAGATaGCTTTCCGCTTCTCTCCCTCATAAGCAGCTGCCTGCTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: IPSLVTRSQNRSNPR*LSASLPHKQLPAFR Trigger: TCTGAAAGCAGGCAGCTGCTTATGAGGGAGAGAAGCGGAAAGCCATCTCGGGTTTGAGCGGTTTTGAGACCTTGTAACCAGAGATGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR CCA 90 bp | AACTATAGAGCTGATTCTTTGAAAGAGGAACCTAGCCCTTCTCACTaGCCACACCACAGCAAGAATGATTCGGCCAGAATCAAGGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: NYRADSLKEEPSPSH*PHHSKNDSARIKAD Trigger: GTCTGCCTTGATTCTGGCCGAATCATTCTTGCTGTGGTGTGGCCAGTGAGAAGGGCTAGGTTCCTCTTTCAAAGAATCAGCTCTATAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| 3UTR TCA 90 bp | TGTGGCCTGGAGGTTGATGGAGACTGGTTTCCAAAGTTGGATTTCTaGATGTTGTTATACGCCATTCTACTCCTCATTCGTACAGCTCGG | + |
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Preference number: 1 (lower is better) Translates to: CGLEVDGDWFPKLDF*MLLYAILLLIRTAR Trigger: CCGAGCTGTACGAATGAGGAGTAGAATGGCGTATAACAACATTCAGAAATCCAACTTTGGAAACCAGTCTCCATCAACCTCCAGGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| 3UTR TCA 90 bp | TGTTTTTCTAGGAAGGTGGTGCCTCTCTTCCACAGCTTCTCGTTTTaGCTCTGGTACTTAGACTGGAGTTGCTTCATCTGGTTCTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: CFSRKVVPLFHSFSF*LWYLDWSCFIWFWN Trigger: ATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGGAAGAGAGGCACCACCTTCCTAGAAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR TCA 90 bp | ATGGACCACCACTCCCAGACTTCCAGTACTCATGTACAGAGAAAATaGAGTTCTCTTCAACAGCCCAGCAGAGAACTGTTTACCAATTTT | + |
|
Preference number: 1 (lower is better) Translates to: MDHHSQTSSTHVQRK*SSLQQPSRELFTNF Trigger: AAAATTGGTAAACAGTTCTCTGCTGGGCTGTTGAAGAGAACTTCATTTTCTCTGTACATGAGTACTGGAAGTCTGGGAGTGGTGGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR CCA 90 bp | TCACTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATaGACCACCACTCCCAGACTTCCAGTACTCATGTACAGAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: SLDKMIMCIVYLYLL*TTTPRLPVLMYREN Trigger: ATTTTCTCTGTACATGAGTACTGGAAGTCTGGGAGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR CAA 90 bp | GTCGGCAATTTGTTCACTCAGACACTTGAGCACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAGGATGGCAGGCTGGGGCCGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGNLFTQTLEHFCSI*SCSEQQDGRLGPRE Trigger: CTCCCTCGGCCCCAGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAAATTGCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR CAA 90 bp | CCGGATGGCACGGACACTACGGAAGGAGGAGTAGGCGTCGGCAATTaGTTCACTCAGACACTTGAGCACTTCTGCAGCATCTTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PDGTDTTEGGVGVGN*FTQTLEHFCSILSC Trigger: GCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTACTCCTCCTTCCGTAGTGTCCGTGCCATCCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCAGGCGTGGTTTACCATaGCCAGCTTGCAACTATCTT | + |
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Preference number: 2 (lower is better) Translates to: GRGIVGVEAVLHPTAQASRRGLP*PACNYL Trigger: AAGATAGTTGCAAGCTGGGCATGGTAAACCACGCCT...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCAGGCTGCACAGGCAGCACGAGGTGGGAGATGCGGCTCCAGAGCCCATTACTTAGACTGGAGTTaGTTCATCTGGTTCTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: CSQAAQAARGGRCGSRAHYLDWS*FIWFWN Trigger: ATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTA...ATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCCCCGTCAATCCGGATaGCACGGACACTACGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: IRPESRQTLGNCIYCTLCPRQSG*HGHYGR Trigger: CCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTAACGAGGTCACTGTCCTaGGCAGCTTTACCTGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: MIRPESRQTLGNCIYCTLTRSLS*AALPAP Trigger: CGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCGT...TAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGACAGGCGTGTGGAATaGTGGGTACTGAATCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IRPESRQTLGNCIYCTLCDRRVE*WVLNPG Trigger: CCCTGGATTCAGTACCCAGCATTCCACACGCCTGTC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAACAAGTCCCAGCATTGTGGCCTGGAGGTTaGTGGAGACTGGTTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GYERTKIVPLQGWQQVPALWPGG*WRLVSK Trigger: TTTGGAAACCAGTCTCCATCAACCTCCAGGCCACAA...TGCTGGGACTTGTTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGACAGATCACAGGCGTaGTTTACCATGCCCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: IRPESRQTLGNCIYCTLCDRSQA*FTMPSL Trigger: CAAGCTGGGCATGGTAAACCACGCCTGTGATCTGTC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAACAAGTCCCAGCATGGTTCTGGAATTCTTaGACGGCAGTGGTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: GYERTKIVPLQGWQQVPAWFWNS*TAVVST Trigger: AGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCA...TGCTGGGACTTGTTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR CCA 90 bp | GAACGGCAGTGGTTTCCACTGCAGGGGTATGAAAGAACCAAAATAGTCCCACTGAAAGTCAGAGAACAATaGGGACAGAGACAGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ERQWFPLQGYERTKIVPLKVREQ*GQRQKE Trigger: CTCCTTCTGTCTCTGTCCCCATTGTTCTCTGACTTT...CAGTGGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGAAACCACTGCCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCCCATTCAGCTTGTCTaGGTCCATGTGGTTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: IRPESRQTLGNCIYCTLCPIQLV*VHVVVG Trigger: TCCTACAACCACATGGACCCAGACAAGCTGAATGGG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR CAA 90 bp | TCTCTTCCACAGCTTCTCGTTTTGACTCTGGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAATTCTTGAACGGCAGTGGTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLPQLLVLTLVLRLE*LHLVLEFLNGSGFH Trigger: GTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCTTTCTAGGAAGGTGGTaGCTCTCTTCCACAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IRPESRQTLGNCIYCTLCFLGRW*LSSTAS Trigger: AGAAGCTGTGGAAGAGAGGCACCACCTTCCTAGAAA...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAACAAGTCCCAGCAGACAGAAGGTTCATTTaGGTGATGGATAGCCGATTG | + |
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Preference number: 2 (lower is better) Translates to: GYERTKIVPLQGWQQVPADRRFI*VMDSRL Trigger: CAATCGGCTATCCATCACCCAAATGAACCTTCTGTC...TGCTGGGACTTGTTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| 3UTR CAA 90 bp | ACTCTGGTACTTAGACTGGAGTTGCTTCATCTGGTTCTGGAATTCTaGAACGGCAGTGGTTTCCACTGCAGGGGTATGAAAGAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: TLVLRLELLHLVLEF*NGSGFHCRGMKEPK Trigger: TTTTGGTTCTTTCATACCCCTGCAGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR GCA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTAGGCGTGGTTTACCATaGCCAGCTTGCAACTATCTT | + |
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Preference number: 2 (lower is better) Translates to: NDSARIKADTRELHILYTRRGLP*PACNYL Trigger: AAGATAGTTGCAAGCTGGGCATGGTAAACCACGCCT...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| 3UTR-3UTR CCA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTTTACGTAACCCAGGGTaGCAGAAAACCCAACTAACT | + |
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Preference number: 2 (lower is better) Translates to: NDSARIKADTRELHILYTLRNPG*QKTQLT Trigger: AGTTAGTTGGGTTTTCTGCCACCCTGGGTTACGTAA...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR CAA 90 bp | CACAGCAAGAATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATaGCATATACTGTACACTATGCTAAATACCTTGAACATGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSKNDSARIKADTRE*HILYTMLNTLNMVQ Trigger: CTGAACCATGTTCAAGGTATTTAGCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATTCTTGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGAACTGGGGAGTGGGGTTaGATTAGGGTCTTGATATAT | + |
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Preference number: 2 (lower is better) Translates to: GIVDMSYLTSKCVSTARGTGEWG*IRVLIY Trigger: ATATATCAAGACCCTAATTCAACCCCACTCCCCAGT...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR-3UTR GCA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTCAGACACTCGGGAATTaGATATACTGTACACTATGC | + |
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Preference number: 2 (lower is better) Translates to: NDSARIKADTRELHILYTQTLGN*IYCTLC Trigger: GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTG...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTCTTGGGCTTCTTAATGGGGGTCTGCATAAGTTGCTTATAGGGTCTTCATCTAAGAGTTTTCTTTaGGGCTGTTTGGCTTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: SSLGLLNGGLHKLLIGSSSKSFL*GCLACN Trigger: GTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGA...TGAAGACCCTATAAGCAACTTATGCAGACCCCCATTAAGAAGCCCAAGACTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACAAAAACTGTCAGGTATTATCAAAGAGAATGCTTTGAATCTGCCTACCTTTTACGTAACCCAGGGTaGCAGAAAACCCAACTAACT | + |
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Preference number: 2 (lower is better) Translates to: RTKTVRYYQRECFESAYLLRNPG*QKTQLT Trigger: AGTTAGTTGGGTTTTCTGCCACCCTGGGTTACGTAA...AAGGTAGGCAGATTCAAAGCATTCTCTTTGATAATACCTGACAGTTTTTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTCATGTACAGAGAAAATaGAGTTCTCTTCAACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTHVQRK*SSLQQP Trigger: GGGCTGTTGAAGAGAACTTCATTTTCTCTGTACATG...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR CCA 72 bp | TGTCCTGAGCAGCTTTACCTGCCCCGTCAATCCGGATaGCACGGACACTACGGAAGGAGGAGTAGGCGTCGG | + |
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Preference number: 3 (lower is better) Translates to: CPEQLYLPRQSG*HGHYGRRSRRR Trigger: CCGACGCCTACTCCTCCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 72 bp | CATAAGCAGCTGCCTGCTTTCAGAGTGTTCTCAGGCTaGACAGGCAGCACGAGGTGGGAGATGCGGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: HKQLPAFRVFSG*TGSTRWEMRLQ Trigger: CTGGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCTGAAAGCAGGCAGCTGCTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGCACGAGGTGGGAGATGCGGCTCCAGAGCCCATTCAGCTTGTCTGGGTCCACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: RQHEVGDAAPEPIQLVWVHFCSI*SCSEQQ Trigger: CTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTG...GACCCAGACAAGCTGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 72 bp | ACTCAGACACTTGAGCACTTCTGCAGCATCTTGAGCTaGAGTGAGCAACAGGATGGCAGGCTGGGGCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: TQTLEHFCSILS*SEQQDGRLGPR Trigger: CCTCGGCCCCAGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR CCA 72 bp | TTCAGAGTGTTCTCAGGCTGCACAGGCAGCACGAGGTaGGAGATGCGGCTCCAGAGCCCATTCAGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FRVFSGCTGSTR*EMRLQSPFSLS Trigger: AGACAAGCTGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGCACGAGGTGGGAGATGCGGCTCCAGAGCCCATTCAGCTTGTCTGGGTCGCAGACACTCGGGAATaGCATATACTGTACACTATG | + |
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Preference number: 3 (lower is better) Translates to: RQHEVGDAAPEPIQLVWVADTRE*HILYTM Trigger: CATAGTGTACAGTATATGCAATTCCCGAGTGTCTGC...GACCCAGACAAGCTGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR TCA 72 bp | AGTGCCGAGATGACAGGCGTGTGGAATGCTGGGTACTaGATCCAGGGTATTGCACAGGCTGGGCTAATGCTC | + |
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Preference number: 3 (lower is better) Translates to: SAEMTGVWNAGY*IQGIAQAGLML Trigger: GAGCATTAGCCCAGCCTGTGCAATACCCTGGATTCAGTACCCAGCATTCCACACGCCTGTCATCTCGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| 3UTR TCA 72 bp | TGTTCACTCAGACACTTGAGCACTTCTGCAGCATCTTaGGCTGCAGTGAGCAACAGGATGGCAGGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: CSLRHLSTSAAS*AAVSNRMAGWG Trigger: GCCCCAGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| 3UTR GCA 72 bp | GTGATGAGTGAGTGCCGAGATGACAGGCGTGTGGAATaGTGGGTACTGAATCCAGGGTATTGCACAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VMSECRDDRRVE*WVLNPGYCTGW Trigger: CCAGCCTGTGCAATACCCTGGATTCAGTACCCAGCATTCCACACGCCTGTCATCTCGGCACTCACTCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR GCA 72 bp | ATGCTTAACGAGGTCACTGTCCTGAGCAGCTTTACCTaGCCCGTCAATCCGGATGGCACGGACACTACGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MLNEVTVLSSFT*PVNPDGTDTTE Trigger: TTCCGTAGTGTCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCGTTAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR GCA 72 bp | CGAGATGGCTTTCCGCTTCTCTCCCTCATAAGCAGCTaGCTGCTTTCAGAGTGTTCTCAGGCTGCACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RDGFPLLSLISS*LLSECSQAAQA Trigger: TGCCTGTGCAGCCTGAGAACACTCTGAAAGCAGGCAGCTGCTTATGAGGGAGAGAAGCGGAAAGCCATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR CCA 72 bp | GCTAGGGGATGGTCACCAGGAGAACACGTGACCAGCTaGTGTGGGATCTCAGGTTCAATTCCTAGTATCGGC | + |
|
Preference number: 3 (lower is better) Translates to: ARGWSPGEHVTS*CGISGSIPSIG Trigger: GCCGATACTAGGAATTGAACCTGAGATCCCACACCAGCTGGTCACGTGTTCTCCTGGTGACCATCCCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CCA 72 bp | CTGGTTACAAGGTCTCAAAACCGCTCAAACCCGAGATaGCTTTCCGCTTCTCTCCCTCATAAGCAGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVTRSQNRSNPR*LSASLPHKQLP Trigger: AGGCAGCTGCTTATGAGGGAGAGAAGCGGAAAGCCATCTCGGGTTTGAGCGGTTTTGAGACCTTGTAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR TCA 72 bp | GAACTTCTGTTCCTCCTGACTCTCCTGAGACAATACTaGGACAGATCACAGGCGTGGTTTACCATGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ELLFLLTLLRQY*DRSQAWFTMPS Trigger: GCTGGGCATGGTAAACCACGCCTGTGATCTGTCTCAGTATTGTCTCAGGAGAGTCAGGAGGAACAGAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | CAGGGTATTGCACAGGCTGGGCTAATGCTCCGCCACTaGGCTTTAGCCTCACACAAGAACACAAACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGIAQAGLMLRH*ALASHKNTNRK Trigger: CTTTCTGTTTGTGTTCTTGTGTGAGGCTAAAGCTCAGTGGCGGAGCATTAGCCCAGCCTGTGCAATACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | TTTCTACTGCTAGGGGATGGTCACCAGGAGAACACGTaGCCAGCTGGTGTGGGATCTCAGGTTCAATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLLGDGHQENT*PAGVGSQVQFL Trigger: TAGGAATTGAACCTGAGATCCCACACCAGCTGGTCACGTGTTCTCCTGGTGACCATCCCCTAGCAGTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR GCA 72 bp | GTCGGCAATTTGTTCACTCAGACACTTGAGCACTTCTaGAGCATCTTGAGCTGCAGTGAGCAACAGGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGNLFTQTLEHF*SILSCSEQQDG Trigger: GCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAAATTGCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR CCA 72 bp | TACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGATaGTCACCAGGAGAACACGTGACCAGCTGGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLTSKCVSTARG*SPGEHVTSWCG Trigger: CCCACACCAGCTGGTCACGTGTTCTCCTGGTGACCATCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | AGGAAGGTGGTGCCTCTCTTCCACAGCTTCTCGTTTTaGCTCTGGTACTTAGACTGGAGTTGCTTCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKVVPLFHSFSF*LWYLDWSCFIW Trigger: CCAGATGAAGCAACTCCAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGGAAGAGAGGCACCACCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR TCA 72 bp | AGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTaGTGGATAGCCGATTGTGGCCTGGAGGTTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SHHFILTEGSFG*WIADCGLEVDG Trigger: TCCATCAACCTCCAGGCCACAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| 3UTR CCA 72 bp | GCCTCTGGTGTTCTAAGAGTTTTCTTTGAGGCTGTTTaGCTTGTAACAGGTCGGGAAGAAGGTTCATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASGVLRVFFEAV*LVTGREEGSSS Trigger: AGAGGATGAACCTTCTTCCCGACCTGTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGAACACCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGCAGACACTCGGGAATaGCATATACTGTACACTATG | + |
|
Preference number: 3 (lower is better) Translates to: IRPESRQTLGNCIYCTLCADTRE*HILYTM Trigger: CATAGTGTACAGTATATGCAATTCCCGAGTGTCTGC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IRPESRQTLGNCIYCTLCVLRLE*LHLVLE Trigger: TTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTAC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATATAGAAGATCAAGGTaGAGCCAGCAGGCAGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: MIRPESRQTLGNCIYCTLYRRSR*SQQAGI Trigger: AATCCCTGCCTGCTGGCTCAACCTTGATCTTCTATA...TAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR TCA 72 bp | ATTTGGGTGATGGATAGCCGATTGTGGCCTGGAGGTTaGTGGAGACTGGTTTCCAAAGTTGGATTTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IWVMDSRLWPGG*WRLVSKVGFLN Trigger: ATTCAGAAATCCAACTTTGGAAACCAGTCTCCATCAACCTCCAGGCCACAATCGGCTATCCATCACCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| 3UTR TCA 72 bp | CACTCCCAGACTTCCAGTACTCATGTACAGAGAAAATaGAGTTCTCTTCAACAGCCCAGCAGAGAACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HSQTSSTHVQRK*SSLQQPSRELF Trigger: AAACAGTTCTCTGCTGGGCTGTTGAAGAGAACTTCATTTTCTCTGTACATGAGTACTGGAAGTCTGGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CCA 72 bp | GTTGCTTCATCTGGTTCTGGAATTCTTGAACGGCAGTaGTTTCCACTGCAGGGGTATGAAAGAACCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: VASSGSGILERQ*FPLQGYERTKI Trigger: TATTTTGGTTCTTTCATACCCCTGCAGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAGATGAAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAATATAGAGCTGATTCTTaGAAAGAGGAACCTAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKYRADS*KEEPSP Trigger: AGGGCTAGGTTCCTCTTTCAAAGAATCAGCTCTATA...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | CAAGTAAATCCAAAGTTAACTATAGAGCTGATTCTTTaGAAGAGGAACCTAGCCCTTCTCACTGGCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: QVNPKLTIELIL*KRNLALLTGHT Trigger: GGTGTGGCCAGTGAGAAGGGCTAGGTTCCTCTTTCAAAGAATCAGCTCTATAGTTAACTTTGGATTTACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATTATAGAGCTGATTCTTaGAAAGAGGAACCTAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YQSDLTETDSNTNLTTHHYRADS*KEEPSP Trigger: AGGGCTAGGTTCCTCTTTCAAAGAATCAGCTCTATA...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATATCAAAGAGAATGCTTaGAATCTGCCTACCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YQSDLTETDSNTNLTTHHIKENA*NLPTFQ Trigger: TTGAAAGGTAGGCAGATTCAAAGCATTCTCTTTGAT...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR GCA 72 bp | TTTGGCTTGAGGTACTCACTCGACAAAATGATCATGTaGATAGTATATCTCTATTTGTTATGGACCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: FGLRYSLDKMIM*IVYLYLLWTTT Trigger: AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAGTGAGTACCTCAAGCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CCA 72 bp | AAAATGATCATGTGCATAGTATATCTCTATTTGTTATaGACCACCACTCCCAGACTTCCAGTACTCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KMIMCIVYLYLL*TTTPRLPVLMY Trigger: GTACATGAGTACTGGAAGTCTGGGAGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | GACAAAAACTGTCAGGTATTATCAAAGAGAATGCTTTaGATCTGCCTACCTTTCAAATTGATAAGAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DKNCQVLSKRML*ICLPFKLIRAK Trigger: CTTAGCTCTTATCAATTTGAAAGGTAGGCAGATTCAAAGCATTCTCTTTGATAATACCTGACAGTTTTTGTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR TCA 72 bp | AATTCTTTACAAAATGAGAATCTTATCAGTCTGACCTaGCCGAAACAGATAGTAATACAAATCTTACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: NSLQNENLISLT*PKQIVIQILPP Trigger: GGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATAAGATTCTCATTTTGTAAAGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAGGCTGCACAGGCAGCACGAGGTGGGAGATGCGGCTCCAGAGCCCATTTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CSQAAQAARGGRCGSRAHFCRLL*KPHFPS Trigger: CGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAA...ATGGGCTCTGGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGTCACTGTCCTGAGCAGCTTTACCTGCCCCGTCAATCCGGATGGCACGGAGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGHCPEQLYLPRQSGWHGGDSCG*CECCSR Trigger: CCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCC...TCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCTTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGFCRLL*KPHFPS Trigger: CGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAA...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097527.10 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCCATCTTGAGCTGCAGTaGGCAACAGGATGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGIVGVEAVLHPTAQASHLELQ*ATGWQA Trigger: AGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATG...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCACTTCTGCAGCATCTTaGGCTGCAGTGAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGTSAAS*AAVSNR Trigger: CCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGT...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCTGGTTCTGGAATTCTTaGACGGCAGTGGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGWFWNS*TAVVST Trigger: AGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCA...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCGTTCACTCAGACACTTaGGCACTTCTGCAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGVHSDT*ALLQHL Trigger: AAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAAC...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCGAAGTCCTGATCTCTTaGCTCAAGAGAATCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGEVLIS*LKRIAG Trigger: TCCAGCGATTCTCTTGAGTCAAGAGATCAGGACTTC...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCTTGTGGCCTGGAGGTTaGTGGAGACTGGTTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGIVGVEAVLHPTAQASLWPGG*WRLVSK Trigger: TTTGGAAACCAGTCTCCATCAACCTCCAGGCCACAA...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | GGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAACAAGTCCCAGCAGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYERTKIVPLQGWQQVPAVAGDS*GCCECC Trigger: GCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCAC...TGCTGGGACTTGTTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCCACTGCAGGGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WFPLQGYERTKIVPLQGWVAGDS*GCCECC Trigger: GCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCAC...CCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGCAACAAGTCCCAGCAGCCACCACTTTATCTTGACAGAAGGTTCACCGGAGACCTTTCTTTaGCCGCCCGGGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARMATSPSSHHFILTEGSPETFL*PPGARS Trigger: ACTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGG...TGAACCTTCTGTCAAGATAAAGTGGTGGCTGCTGGGACTTGTTGCCATCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGAGTGTTCTCAGGCTGCACAGGCAGCACGAGGTGGGAGATGCGGCTCCCTGATTCTCATGAGCTaGGAAGTCCTGATTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSECSQAAQAARGGRCGSLILMS*EVLIVW Trigger: CCACACAATCAGGACTTCCCAGCTCATGAGAATCAG...GGAGCCGCATCTCCCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCCGAGGGCTACATCTTTaGAGGCTGCATTTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGIVGVEAVLHPTAQASRGLHL*RLHFHG Trigger: ACCATGAAAATGCAGCCTTCAAAGATGTAGCCCTCG...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCGAAGTCCTGATCTCTTaGCTCAAGAGAATCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGIVGVEAVLHPTAQASEVLIS*LKRIAG Trigger: TCCAGCGATTCTCTTGAGTCAAGAGATCAGGACTTC...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCGTTTTTCTAGGAAGGTaGTGCCTCTCTTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGIVGVEAVLHPTAQASVFLGR*CLSSTA Trigger: AGCTGTGGAAGAGAGGCACCACCTTCCTAGAAAAAC...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | TTGTTCACTCAGACACTTGAGCACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAGGATGGCAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTQTLEHFCSI*SCSEQQDGRLG Trigger: CCCCAGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | GAATCAAGTCTTGGGCTTCTTAATGGGGGTCTGCATAAGTTGCTTATAGGGTCTGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLGLLNGGLHKLLIGSVAGDS*GCCECC Trigger: GCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCAC...AGACCCTATAAGCAACTTATGCAGACCCCCATTAAGAAGCCCAAGACTTGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCCGGAGACCTTTCTTTaGCCGCCCGGGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRPESRQTLGNCIYCTLCPETFL*PPGARS Trigger: ACTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTGCCGGAGACCTTTCTTTaGCCGCCCGGGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLYLDRRFIWVMDSRLPETFL*PPGARS Trigger: ACTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGG...CAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| 3UTR CAA 72 bp | ACGGACACTACGGAAGGAGGAGTAGGCGTCGGCAATTaGTTCACTCAGACACTTGAGCACTTCTGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDTTEGGVGVGN*FTQTLEHFCSI Trigger: GATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTACTCCTCCTTCCGTAGTGTCCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | CGAGGTCACTGTCCTGAGCAGCTTTACCTGCCCCGTCAATCCGGATGGCACGGATCTAAGAGTTTTCTTTaGGGCTGTTTGGCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGHCPEQLYLPRQSGWHGSKSFL*GCLACN Trigger: GTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGA...TCCGTGCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRPESRQTLGNCIYCTLCGDSCG*CECCSR Trigger: CCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTGGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLYLDRRFIWVMDSRLGDSCG*CECCSR Trigger: CCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCC...CAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCTACTTAGACTGGAGTTaGTTCATCTGGTTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGYLDWS*FIWFWN Trigger: ATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTA...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AATGGGGGTCTGCATAAGTTGCTTATAGGGTCTTCATTCATCACTGAAGCCTCTCCGGAGACCTTTCTTTaGCCGCCCGGGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGGLHKLLIGSSFITEASPETFL*PPGARS Trigger: ACTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGG...AGAGGCTTCAGTGATGAATGAAGACCCTATAAGCAACTTATGCAGACCCCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCACTGCAGGGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAATTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FPLQGYERTKIVPLQGWQFCRLL*KPHFPS Trigger: CGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAA...TTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCTACATCTTTGAAGGCTaGATTTTCATGGTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GREGDSGCRGSTSSYSPGYIFEG*IFMVTV Trigger: TACTGTGACCATGAAAATGCAGCCTTCAAAGATGTA...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAAGCACGAGGTGGGAGATaGGGCTCCAGAGCCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKARGGR*GSRAHS Trigger: TGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGC...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGAACGAGGTCACTGTCCTaGGCAGCTTTACCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GIVDMSYLTSKCVSTARGTRSLS*AALPAP Trigger: CGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCGT...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGCAACAAGTCCCAGCAGCCACCACTTTATCTTGACAGAAGGTTCAGTGTATGTTGAGTGCTaGTGCCTGCAGAAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARMATSPSSHHFILTEGSVYVEC*CLQKQK Trigger: CTTCTGCTTCTGCAGGCACCAGCACTCAACATACAC...TGAACCTTCTGTCAAGATAAAGTGGTGGCTGCTGGGACTTGTTGCCATCCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR GCA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGACTGAGCAGCTTTACCTaGCCCGTCAATCCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIVDMSYLTSKCVSTARGLSSFT*PVNPDG Trigger: GCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAG...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCCACTGCAGGGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCATGTGTATGTTGAGTaGTGGTGCCTGCAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WFPLQGYERTKIVPLQGWHVYVE*WCLQKQ Trigger: CTGCTTCTGCAGGCACCAGCACTCAACATACACATG...CCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR CCA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATCCCCGTCAATCCGGATaGCACGGACACTACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YQSDLTETDSNTNLTTHHPRQSG*HGHYGR Trigger: CCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGG...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACAGCTGCGGCTGCTGTaGGTGCTGCTCAAGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKQLRLL*VLLKAS Trigger: GCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTTATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTGTGGCCTTGTGCATGTGTATGTTaGGTGCTGGTGCCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYLDRRFIWVMDSRLWPCACVC*VLVPAE Trigger: TTCTGCAGGCACCAGCACTCAACATACACATGCACA...AGGCCACAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR GCA 90 bp | GACCTGCTGGACAATGGTAGCTTCTCTTTCATTCGTTTTAGTATTTCCATTTGTGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLDNGSFSFIRFSISICGDSCG*CECCSR Trigger: CCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCC...ACAAATGGAAATACTAAAACGAATGAAAGAGAAGCTACCATTGTCCAGCAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKVAGDS*GCCECC Trigger: GCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCAC...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKVAGDS*GCCECC Trigger: GCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCAC...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATCTGAGCAGCTTTACCTaGCCCGTCAATCCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YQSDLTETDSNTNLTTHHLSSFT*PVNPDG Trigger: GCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAG...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAAAACTGTCAGGTATTATCAAAGAGAATGCTTTGAATCTGCCTACCTTAACAGGATGGCAGGCTaGGGCCGAGGGAGGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTKTVRYYQRECFESAYLNRMAG*GRGREL Trigger: TAGCTCCCTCCCTCGGCCCCAGCCTGCCATCCTGTT...AAGGTAGGCAGATTCAAAGCATTCTCTTTGATAATACCTGACAGTTTTTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAACGAGGTCACTGTCCTaGGCAGCTTTACCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSTRSLS*AALPAP Trigger: CGGGGCAGGTAAAGCTGCTCAGGACAGTGACCTCGT...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCGAGGGCTACATCTTTaGAGGCTGCATTTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRPESRQTLGNCIYCTLCRGLHL*RLHFHG Trigger: ACCATGAAAATGCAGCCTTCAAAGATGTAGCCCTCG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTGACCAGACAAAGAAACTaGTCCAACCCTCTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLYLDRRFIWVMDSRLTRQRN*SNPLTS Trigger: ACTGGTCAGAGGGTTGGATCAGTTTCTTTGTCTGGT...CAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR GCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSGDSCG*CECCSR Trigger: CCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCC...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCGCACGAGGTGGGAGATaGGGCTCCAGAGCCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLARGGR*GSRAHS Trigger: TGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGC...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTGCACGAGGTGGGAGATaGGGCTCCAGAGCCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTARGGR*GSRAHS Trigger: TGAATGGGCTCTGGAGCCGCATCTCCCACCTCGTGC...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCGGAGACCTTTCTTTaGCCGCCCGGGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKPETFL*PPGARS Trigger: ACTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAACAGGATGGCAGGCTaGGGCCGAGGGAGGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKNRMAG*GRGREL Trigger: TAGCTCCCTCCCTCGGCCCCAGCCTGCCATCCTGTT...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | ATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTACCCATTCAGCTTGTCTaGGTCCATGTGGTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MIRPESRQTLGNCIYCTLPIQLV*VHVVVG Trigger: TCCTACAACCACATGGACCCAGACAAGCTGAATGGG...TAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | CTTAGACTGGAGTTGCTTCATCTGGTTCTGGAATTCTaGAACGGCAGTGGTTTCCACTGCAGGGGTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLELLHLVLEF*NGSGFHCRGMK Trigger: TTTCATACCCCTGCAGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAGATGAAGCAACTCCAGTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTGTTCACTCAGACACTTaGGCACTTCTGCAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDSARIKADTRELHILYTVHSDT*ALLQHL Trigger: AAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAAC...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGAATAGAAGATCAAGGTTaGGCCAGCAGGCAGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GIVDMSYLTSKCVSTARGIEDQG*ASRQGF Trigger: GAATCCCTGCCTGCTGGCTCAACCTTGATCTTCTAT...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAATTTCTAGGAAGGTGGTaGCTCTCTTCCACAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKFLGRW*LSSTAS Trigger: AGAAGCTGTGGAAGAGAGGCACCACCTTCCTAGAAA...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTAGAGTGTTCTCAGGCTaGACAGGCAGCACGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTRVFSG*TGSTRW Trigger: CCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCT...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACCCCGTCAATCCGGATaGCACGGACACTACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKPRQSG*HGHYGR Trigger: CCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCCCGTCAATCCGGATaGCACGGACACTACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKPRQSG*HGHYGR Trigger: CCTTCCGTAGTGTCCGTGCCATCCGGATTGACGGGG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | CAGCTTCTCGTTTTGACTCTGGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAATTCTTGAACGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLVLTLVLRLE*LHLVLEFLNGS Trigger: ACTGCCGTTCAAGAATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAGTCAAAACGAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAATTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKFCRLL*KPHFPS Trigger: CGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAA...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | GATGGCAACAAGTCCCAGCAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGTCTAAGAGTTTTCTTTaGGGCTGTTTGGCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGNKSQQPPLYLDRRFIWSKSFL*GCLACN Trigger: GTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGA...CCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTGCTGGGACTTGTTGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGATCCACTGCAGGGGTATaGAAGAACCAAAATAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GIVDMSYLTSKCVSTARGSTAGV*KNQNSP Trigger: GGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGA...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGAGACTTCCACTGCAGGGGTATaGAAGAACCAAAATAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLTETDSNTNLTTHHETSTAGV*KNQNSP Trigger: GGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGA...AGTCTCATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCCATCTTGAGCTGCAGTaGGCAACAGGATGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLHLELQ*ATGWQA Trigger: AGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATG...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACTGAGCAGCTTTACCTaGCCCGTCAATCCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKLSSFT*PVNPDG Trigger: GCCATCCGGATTGACGGGGCAGGTAAAGCTGCTCAG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAGAGTGTTCTCAGGCTaGACAGGCAGCACGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKRVFSG*TGSTRW Trigger: CCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCT...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAAGAGTGTTCTCAGGCTaGACAGGCAGCACGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKRVFSG*TGSTRW Trigger: CCACCTCGTGCTGCCTGTGCAGCCTGAGAACACTCT...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGTTGGATTTCTGAATGTTGTTATACGCCATTCTACTCCTCATTCGTACTTGAGTGCTGGTGCCTaGAGAAGCAGAAGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKVGFLNVVIRHSTPHSYLSAGA*RSRRCW Trigger: CCAACACCTTCTGCTTCTGCAGGCACCAGCACTCAA...GTACGAATGAGGAGTAGAATGGCGTATAACAACATTCAGAAATCCAACTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGAGACTGTTTTTCTAGGAAGGTaGTGCCTCTCTTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLTETDSNTNLTTHHETVFLGR*CLSSTA Trigger: AGCTGTGGAAGAGAGGCACCACCTTCCTAGAAAAAC...AGTCTCATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCGAGGTTGATGGAGACTaGTTTCCAAAGTTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRPESRQTLGNCIYCTLCEVDGD*FPKLDF Trigger: GAAATCCAACTTTGGAAACCAGTCTCCATCAACCTC...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTGACAGAAGGTTCATTTaGGTGATGGATAGCCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: NDSARIKADTRELHILYTDRRFI*VMDSRL Trigger: CAATCGGCTATCCATCACCCAAATGAACCTTCTGTC...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | TCAAGTCTTGGGCTTCTTAATGGGGGTCTGCATAAGTaGCTTATAGGGTCTTCATTCATCACTGAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLGLLNGGLHK*LIGSSFITEAS Trigger: AGAGGCTTCAGTGATGAATGAAGACCCTATAAGCAACTTATGCAGACCCCCATTAAGAAGCCCAAGACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
||
| CDS-3UTR TCA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCTCTAAGAGTTTTCTTTaGGGCTGTTTGGCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRPESRQTLGNCIYCTLCSKSFL*GCLACN Trigger: GTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGA...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGAGACTGCCACCACTTTATCTTaGCAGAAGGTTCATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLTETDSNTNLTTHHETATTLS*QKVHLG Trigger: ACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGC...AGTCTCATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACATCTTGAGCTGCAGTaGGCAACAGGATGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKHLELQ*ATGWQA Trigger: AGCCTGCCATCCTGTTGCTCACTGCAGCTCAAGATG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAACTTCTGCAGCATCTTaGGCTGCAGTGAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSTSAAS*AAVSNR Trigger: CCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGT...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCACTTCTGCAGCATCTTaGGCTGCAGTGAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLTSAAS*AAVSNR Trigger: CCTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGT...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGTTGGATTTCTGAATGTTGTTATACGCCATTCTACTCCTCATTCGTACGGTGGCTTCATCTCTTaGCTCAAGAGAATCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKVGFLNVVIRHSTPHSYGGFIS*LKRIAG Trigger: TCCAGCGATTCTCTTGAGTCAAGAGATGAAGCCACC...GTACGAATGAGGAGTAGAATGGCGTATAACAACATTCAGAAATCCAACTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGTTGGATTTCTGAATGTTGTTATACGCCATTCTACTCCTCATTCGTACTATGTTGAGTGCTGGTaGCTGCAGAAGCAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKVGFLNVVIRHSTPHSYYVECW*LQKQKV Trigger: CACCTTCTGCTTCTGCAGGCACCAGCACTCAACATA...GTACGAATGAGGAGTAGAATGGCGTATAACAACATTCAGAAATCCAACTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCGTGAATCTGGATGATTaGCAGCTGCTGGGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLVNLDD*QLLGWL Trigger: AAGCCACCCCAGCAGCTGGCAATCATCCAGATTCAC...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAAGAGGTTGATGGAGACTaGTTTCCAAAGTTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKEVDGD*FPKLDF Trigger: GAAATCCAACTTTGGAAACCAGTCTCCATCAACCTC...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | CTGTTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTaGAGGTACTCACTCGACAAAATGATCATGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LFFTCGKVHSFG*RYSLDKMIMCI Trigger: TATGCACATGATCATTTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAAAAACTGTCAGGTATTATCAAAGAGAATGCTTTGAATCTGCCTACCTTATAGAAGATCAAGGTTaGGCCAGCAGGCAGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTKTVRYYQRECFESAYLIEDQG*ASRQGF Trigger: GAATCCCTGCCTGCTGGCTCAACCTTGATCTTCTAT...AAGGTAGGCAGATTCAAAGCATTCTCTTTGATAATACCTGACAGTTTTTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCATTGTGGCCTGGAGGTTaGTGGAGACTGGTTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSLWPGG*WRLVSK Trigger: TTTGGAAACCAGTCTCCATCAACCTCCAGGCCACAA...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAATGCCAGCTGCTGGGGTaGCTTCATCTCTTGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKCQLLG*LHLLTQ Trigger: TTGAGTCAAGAGATGAAGCCACCCCAGCAGCTGGCA...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| 3UTR CAA 72 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATaGCATATACTGTACACTATGCTAAATACCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NDSARIKADTRE*HILYTMLNTLN Trigger: GTTCAAGGTATTTAGCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | ACAAGTAAATCCAAAGTTAACTATAGAGCTGATTCTTaGAAAGAGGAACCTAGCCCTTCTCACTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKSKVNYRADS*KEEPSPSHWPH Trigger: GTGTGGCCAGTGAGAAGGGCTAGGTTCCTCTTTCAAAGAATCAGCTCTATAGTTAACTTTGGATTTACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
||
| 3UTR CAA 72 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTaGTTATGGACCACCACTCCCAGACTTCCAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIMCIVYLY*LWTTTPRLPVL Trigger: GAGTACTGGAAGTCTGGGAGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAGATAGCCGATTCTCTTaGCTCAAGAGAATCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSDSRFS*LKRIAG Trigger: TCCAGCGATTCTCTTGAGTCAAGAGAATCGGCTATC...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCTCCACTGCAGGGGTATaGAAGAACCAAAATAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLSTAGV*KNQNSP Trigger: GGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGA...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCTGGTTCTGGAATTCTTaGACGGCAGTGGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLWFWNS*TAVVST Trigger: AGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCA...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCATGGTTCTGGAATTCTTaGACGGCAGTGGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSWFWNS*TAVVST Trigger: AGTGGAAACCACTGCCGTTCAAGAATTCCAGAACCA...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCGTTCACTCAGACACTTaGGCACTTCTGCAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLVHSDT*ALLQHL Trigger: AAGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAAC...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAATAGAAGATCAAGGTTaGGCCAGCAGGCAGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKIEDQG*ASRQGF Trigger: GAATCCCTGCCTGCTGGCTCAACCTTGATCTTCTAT...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCACACTTGAGCACTTCTaGAGCATCTTGAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLTLEHF*SILSCS Trigger: ACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGT...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AGGACAAAAACTGTCAGGTATTATCAAAGAGAATGCTTTGAATCTGCCTACCTTACACTTGAGCACTTCTaGAGCATCTTGAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTKTVRYYQRECFESAYLTLEHF*SILSCS Trigger: ACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGT...AAGGTAGGCAGATTCAAAGCATTCTCTTTGATAATACCTGACAGTTTTTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTACACTTGAGCACTTCTaGAGCATCTTGAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTTLEHF*SILSCS Trigger: ACTGCAGCTCAAGATGCTGCAGAAGTGCTCAAGTGT...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAATACATCTTTGAAGGCTaGATTTTCATGGTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKYIFEG*IFMVTV Trigger: TACTGTGACCATGAAAATGCAGCCTTCAAAGATGTA...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCCATTCAGCTTGTCTaGGTCCATGTGGTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKPIQLV*VHVVVG Trigger: TCCTACAACCACATGGACCCAGACAAGCTGAATGGG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACGAGGGCTACATCTTTaGAGGCTGCATTTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKRGLHL*RLHFHG Trigger: ACCATGAAAATGCAGCCTTCAAAGATGTAGCCCTCG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAATTTCTAGGAAGGTGGTaGCTCTCTTCCACAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKFLGRW*LSSTAS Trigger: AGAAGCTGTGGAAGAGAGGCACCACCTTCCTAGAAA...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAGACAGAAGGTTCATTTaGGTGATGGATAGCCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSDRRFI*VMDSRF Trigger: GAATCGGCTATCCATCACCCAAATGAACCTTCTGTC...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
||
| CDS-3UTR CCA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTCTCTGGTACTTAGACTaGAGTTGCTTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTLWYLD*SCFIWF Trigger: GAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAG...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCACTCTGGTACTTAGACTaGAGTTGCTTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSLWYLD*SCFIWF Trigger: GAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAG...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAGTTTTTCTAGGAAGGTaGTGCCTCTCTTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKVFLGR*CLSSTA Trigger: AGCTGTGGAAGAGAGGCACCACCTTCCTAGAAAAAC...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAGACAGAAGGTTCATTTaGGTGATGGATAGCCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSDRRFI*VMDSRL Trigger: CAATCGGCTATCCATCACCCAAATGAACCTTCTGTC...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAGCCACCACTTTATCTTaGCAGAAGGTTCATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKATTLS*QKVHLG Trigger: ACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGC...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACTCTGGTACTTAGACTaGAGTTGCTTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKLWYLD*SCFIWF Trigger: GAACCAGATGAAGCAACTCCAGTCTAAGTACCAGAG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCATACTTAGACTGGAGTTaGTTCATCTGGTTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNQFSKTVPNSISGYKVSYLDWS*FIWFWN Trigger: ATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTA...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCACCACAGCTGCATTCTaGCCATTTTTAAATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLTTAAF*PFLNPS Trigger: TGATGGATTTAAAAATGGCCAGAATGCAGCTGTGGT...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAATCTAAGAGTTTTCTTTaGGGCTGTTTGGCTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKSKSFL*GCLACN Trigger: GTTACAAGCCAAACAGCCTCAAAGAAAACTCTTAGA...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAATACTTAGACTGGAGTTaGTTCATCTGGTTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKYLDWS*FIWFWN Trigger: ATTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTA...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAAAGTTGGATTTCTGAATGTTGTTATACGCCATTCTACTCCTCATTCGTATTTTTCCCTTTTGTGTaGATGTGTATGTTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQSWISECCYTPFYSSFVFFPFV*MCMLSA Trigger: AGCACTCAACATACACATGCACACAAAAGGGAAAAA...TACGAATGAGGAGTAGAATGGCGTATAACAACATTCAGAAATCCAACTTTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCACAGCTGCATTCTaGCCATTTTTAAATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKTTAAF*PFLNPS Trigger: TGATGGATTTAAAAATGGCCAGAATGCAGCTGTGGT...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAACCACAGCTGCATTCTaGCCATTTTTAAATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKTTAAF*PFLNPS Trigger: TGATGGATTTAAAAATGGCCAGAATGCAGCTGTGGT...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAATACATCTTTGAAGGCTaGATTTTCATGGTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSKTVPNSISGYKVSKYIFEG*IFMVTV Trigger: TACTGTGACCATGAAAATGCAGCCTTCAAAGATGTA...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS TCA 90 bp | GCGGGTCGAGCCTCCGCCTTCCCTCCCGGATGGGGGCTCTGGGTGTaGCGTAGATGGCCCAACCTTCTCCGGGCCCCTCGGCCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGRASAFPPGWGLWV*RRWPNLLRAPRPAT Trigger: GGTGGCAGGCCGAGGGGCCCGGAGAAGGTTGGGCCATCTACGTCACACCCAGAGCCCCCATCCGGGAGGGAAGGCGGAGGCTCGACCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS GCA 90 bp | GTCGTCCGCGGCGCGACGGGTGAGCTCCGTACGCAGGCGCGTCACTaGTGTCGCCATTTCGCGGGTCGAGCCTCCGCCTTCCCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVRGATGELRTQARH*CRHFAGRASAFPPG Trigger: TCCGGGAGGGAAGGCGGAGGCTCGACCCGCGAAATGGCGACAGCAGTGACGCGCCTGCGTACGGAGCTCACCCGTCGCGCCGCGGACGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS TCA 90 bp | GGCCGCCCGGGGCTCGAAGTCGCCGTACACTTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCGTCCGCGGCGCGACGGGTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPGLEVAVHFCRLL*KPHFPSSAARRVSS Trigger: GGAGCTCACCCGTCGCGCCGCGGACGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAAGTGTACGGCGACTTCGAGCCCCGGGCGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS TCA 90 bp | GGCTCCTCTGAAAACCTCACTTCCCGTCGTCCGCGGCGCGACGGGTaGGCTCCGTACGCAGGCGCGTCACTGCTGTCGCCATTTCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSENLTSRRPRRDG*APYAGASLLSPFRG Trigger: CCCGCGAAATGGCGACAGCAGTGACGCGCCTGCGTACGGAGCTCACCCGTCGCGCCGCGGACGACGGGAAGTGAGGTTTTCAGAGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS GCA 90 bp | CCTCGGCCGCTCGTGGCCGGAGACAGCTGCGGCTGCTGTGAGTGCTaGTCAAGGCGAGCAGACCTCCGCGTCTTCATCTCCTCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPLVAGDSCGCCEC*SRRADLRVFISSAS Trigger: GGAAGCCGAGGAGATGAAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS GCA 90 bp | AACCCTCGGCCGCTCGTGGCCGGAGACAGCTGCGGCTGCTGTGAGTaGTGCTCAAGGCGAGCAGACCTCCGCGTCTTCATCTCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NPRPLVAGDSCGCCE*CSRRADLRVFISSA Trigger: AGCCGAGGAGATGAAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGGGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS GCA 90 bp | GAGTCCCGTAACCCTCGGCCGCTCGTGGCCGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGGCGAGCAGACCTCCGCGTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ESRNPRPLVAGDSCG*CECCSRRADLRVFI Trigger: GATGAAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGGGTTACGGGACTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | GGGTATGAAAGAACCAAAATAGTCCCACTGCAAGGATGGCAACAAGTCCCAGCACCCGGAGACCTTTCTTaGGCCGCCCGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYERTKIVPLQGWQQVPAPGDLS*AARGSK Trigger: CTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGGG...TGCTGGGACTTGTTGCCATCCTTGCAGTGGGACTATTTTGGTTCTTTCATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCCCGGAGACCTTTCTTaGGCCGCCCGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRPESRQTLGNCIYCTLCPGDLS*AARGSK Trigger: CTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGGG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCCCACAGCTTCTCGTTTaGACTCTGGTACTTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GREGDSGCRGSTSSYSPGPQLLV*TLVLRL Trigger: CAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGG...GCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGGATAGTGGGTGTAGAGGCAGTACTTCATCCTACAGCCCAGGCAAGCTATAGAAGATCAAGGTaGAGCCAGCAGGCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GRGIVGVEAVLHPTAQASYRRSR*SQQAGI Trigger: AATCCCTGCCTGCTGGCTCAACCTTGATCTTCTATA...GCTTGCCTGGGCTGTAGGATGAAGTACTGCCTCTACACCCACTATCCCCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS TCA 90 bp | AGCTGGGAAGTCCTGATTGTGTGGCAGCCCCTCAGTGAATCTGGATaGTTGCCAGCTGCTGGGGTGGCTTCATCTCTTGACTCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWEVLIVWQPLSESG*LPAAGVASSLDSRE Trigger: TTCTCTTGAGTCAAGAGATGAAGCCACCCCAGCAGCTGGCAATCATCCAGATTCACTGAGGGGCTGCCACACAATCAGGACTTCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTGCTTATAGGGTCTTCATTCATCACTGAAGCCTCTGGTGTTCTAAGAGTTCCCGGAGACCTTTCTTaGGCCGCCCGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLLIGSSFITEASGVLRVPGDLS*AARGSK Trigger: CTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGGG...AACTCTTAGAACACCAGAGGCTTCAGTGATGAATGAAGACCCTATAAGCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123705.8 |
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| CDS-3UTR CAA 90 bp | TGGATAGCCGATTGTGGCCTGGAGGTTGATGGAGACTGGTTTCCAAAGTTGGATGTGTGCATGTGTATGTaGAGTGCTGGTGCCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WIADCGLEVDGDWFPKLDVCMCM*SAGACR Trigger: TCTGCAGGCACCAGCACTCAACATACACATGCACAC...ATCCAACTTTGGAAACCAGTCTCCATCAACCTCCAGGCCACAATCGGCTATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130995.4 |
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| CDS-3UTR CAA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCACCCGGAGACCTTTCTTaGGCCGCCCGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RNQFSKTVPNSISGYKVSPGDLS*AARGSK Trigger: CTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGGG...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCCGGAGACCTTTCTTaGGCCGCCCGGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQFSKTVPNSISGYKVSKPGDLS*AARGSK Trigger: CTTCGAGCCCCGGGCGGCCAAAGAAAGGTCTCCGGG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 |
||
| CDS TCA 90 bp | AGTCCCAGCAGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTaGTGGATAGCCGATTCTCTTGACTCAAGAGAATCGCTGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSHHFILTEGSFG*WIADSLDSRESLDL Trigger: CAGATCCAGCGATTCTCTTGAGTCAAGAGAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCTGCTGGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
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| CDS-3UTR CAA 90 bp | GAACGGCAGTGGTTTCCACTGCAGGGGTATGAAAGAACCAAAATAGTCCCACTGCCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ERQWFPLQGYERTKIVPLPSSKK*TCWTMV Trigger: TACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGG...CAGTGGGACTATTTTGGTTCTTTCATACCCCTGCAGTGGAAACCACTGCCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTCTGGTTCTGGAATTCTaGAACGGCAGTGGTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NDSARIKADTRELHILYTLVLEF*NGSGFH Trigger: GTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAG...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS TCA 90 bp | TATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTCTCTTaGCTCAAGAGAATCGCTGGATCTGGCCCTGATAGTGATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: YLDRRFIWVMDSRFS*LKRIAGSGPDSDVT Trigger: AGTGACATCACTATCAGGGCCAGATCCAGCGATTCTCTTGAGTCAAGAGAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
||
| CDS-3UTR CAA 90 bp | CCACTTTATCTTGACAGAAGGTTCATTTGGGTGATGGATAGCCGATTGTGGCCTCCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLYLDRRFIWVMDSRLWPPSSKK*TCWTMV Trigger: TACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGG...AGGCCACAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130995.4 ENSMUST00000136331.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGAGACTCTGGTTCTGGAATTCTaGAACGGCAGTGGTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SDLTETDSNTNLTTHHETLVLEF*NGSGFH Trigger: GTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAG...AGTCTCATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAACCACAGCTTCTCGTTTaGACTCTGGTACTTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKPQLLV*TLVLRL Trigger: CAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGG...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAATGTTCACTCAGACACTaGAGCACTTCTGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKCSLRH*STSAAS Trigger: AGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACA...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | AATGATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTACGAGGGCTACATCTTaGAAGGCTGCATTTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NDSARIKADTRELHILYTTRATS*KAAFSW Trigger: CCATGAAAATGCAGCCTTCAAAGATGTAGCCCTCGT...AGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | ATTCGGCCAGAATCAAGGCAGACACTCGGGAATTGCATATACTGTACACTATGCCTAGAGCTGGTGAACTaGACTTTAAGGAAATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IRPESRQTLGNCIYCTLCLELVN*TLRKSL Trigger: GAGGGATTTCCTTAAAGTCAAGTTCACCAGCTCTAG...GCATAGTGTACAGTATATGCAATTCCCGAGTGTCTGCCTTGATTCTGGCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCACGTGTGGTAAGGTTCACTCTTTTGGCTTGAGGTACTCACTCGACAAAGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FFTCGKVHSFGLRYSLDKVLRLE*LHLVLE Trigger: TTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTAC...TTTGTCGAGTGAGTACCTCAAGCCAAAAGAGTGAACCTTACCACACGTGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGATGTTCACTCAGACACTaGAGCACTTCTGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GIVDMSYLTSKCVSTARGCSLRH*STSAAS Trigger: AGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACA...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGTAGGCGTCGGCAATTaGTTCACTCAGACACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YQSDLTETDSNTNLTTHHVGVGN*FTQTLE Trigger: CTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTAC...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTGTAGACATGAGTTACCTGACTTCAAAATGTGTTTCTACTGCTAGGGGACCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GIVDMSYLTSKCVSTARGPSSKK*TCWTMV Trigger: TACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGG...TCCCCTAGCAGTAGAAACACATTTTGAAGTCAGGTAACTCATGTCTACAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCCACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLHFCSI*SCSEQQ Trigger: CTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTG...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YQSDLTETDSNTNLTTHHVLRLE*LHLVLE Trigger: TTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTAC...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: NQFSKTVPNSISGYKVSKHFCSI*SCSEQQ Trigger: CTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACACTTCTGCAGCATCTaGAGCTGCAGTGAGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKHFCSI*SCSEQQ Trigger: CTGTTGCTCACTGCAGCTCAAGATGCTGCAGAAGTG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | CTCGACAAAATGATCATGTGCATAGTATATCTCTATTTGTTATGGACCACCACTGTAGGCGTCGGCAATTaGTTCACTCAGACACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LDKMIMCIVYLYLLWTTTVGVGN*FTQTLE Trigger: CTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTAC...AGTGGTGGTCCATAACAAATAGAGATATACTATGCACATGATCATTTTGTCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | TATCAGTCTGACCTGACCGAAACAGATAGTAATACAAATCTTACCACCCACCATCTAGAGCTGGTGAACTaGACTTTAAGGAAATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: YQSDLTETDSNTNLTTHHLELVN*TLRKSL Trigger: GAGGGATTTCCTTAAAGTCAAGTTCACCAGCTCTAG...ATGGTGGGTGGTAAGATTTGTATTACTATCTGTTTCGGTCAGGTCAGACTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS GCA 90 bp | CTCTCGAGATCATCTTCGGTTTCTCCTTCTTCGAAGAAATTGACCTaGTGGACAATGGTAGCTTCTCTTTCATTCGTTTTAGTATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LSRSSSVSPSSKKLT*WTMVASLSFVLVFP Trigger: TGGAAATACTAAAACGAATGAAAGAGAAGCTACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGGAGAAACCGAAGATGATCTCGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 ENSMUST00000136397.8 ENSMUST00000141878.8 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACTGGTTCTGGAATTCTaGAACGGCAGTGGTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: NQFSKTVPNSISGYKVSKLVLEF*NGSGFH Trigger: GTGGAAACCACTGCCGTTCAAGAATTCCAGAACCAG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCATGTTCACTCAGACACTaGAGCACTTCTGCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: RNQFSKTVPNSISGYKVSCSLRH*STSAAS Trigger: AGATGCTGCAGAAGTGCTCAAGTGTCTGAGTGAACA...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAAGTAGGCGTCGGCAATTaGTTCACTCAGACACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: NQFSKTVPNSISGYKVSKVGVGN*FTQTLE Trigger: CTCAAGTGTCTGAGTGAACAAATTGCCGACGCCTAC...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCATATAGAAGATCAAGGTaGAGCCAGCAGGCAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: RNQFSKTVPNSISGYKVSYRRSR*SQQAGI Trigger: AATCCCTGCCTGCTGGCTCAACCTTGATCTTCTATA...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCTATAGAAGATCAAGGTaGAGCCAGCAGGCAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLYRRSR*SQQAGI Trigger: AATCCCTGCCTGCTGGCTCAACCTTGATCTTCTATA...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAACGAGGGCTACATCTTaGAAGGCTGCATTTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: RNQFSKTVPNSISGYKVSTRATS*KAAFSW Trigger: CCATGAAAATGCAGCCTTCAAAGATGTAGCCCTCGT...TGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCCCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTA | + |
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Preference number: 5 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLPSSKK*TCWTMV Trigger: TACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGG...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCGTACTTAGACTGGAGTaGCTTCATCTGGTTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLVLRLE*LHLVLE Trigger: TTCCAGAACCAGATGAAGCAACTCCAGTCTAAGTAC...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAAACCACAGCTTCTCGTTTaGACTCTGGTACTTAGACTG | + |
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Preference number: 5 (lower is better) Translates to: NQFSKTVPNSISGYKVSKPQLLV*TLVLRL Trigger: CAGTCTAAGTACCAGAGTCAAAACGAGAAGCTGTGG...TTTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCCTAGAGCTGGTGAACTaGACTTTAAGGAAATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: KKPVFKNCSKFHLWLQGLLELVN*TLRKSL Trigger: GAGGGATTTCCTTAAAGTCAAGTTCACCAGCTCTAG...GAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000169241.8 |
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| CDS CCA 90 bp | TCGAGATCATCTTCGGTTTCTCCTTCTTCGAAGAAATTGACCTGCTaGACAATGGTAGCTTCTCTTTCATTCGTTTTAGTATTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: SRSSSVSPSSKKLTC*TMVASLSFVLVFPF Trigger: AAATGGAAATACTAAAACGAATGAAAGAGAAGCTACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGGAGAAACCGAAGATGATCTCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 ENSMUST00000136397.8 ENSMUST00000141878.8 ENSMUST00000169241.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGTTTTCAAAAACTGTTCCAAATTCCATCTCTGGTTACAAGGTCTCAAACCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTA | + |
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Preference number: 5 (lower is better) Translates to: KPVFKNCSKFHLWLQGLKPSSKK*TCWTMV Trigger: TACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGG...TTTGAGACCTTGTAACCAGAGATGGAATTTGGAACAGTTTTTGAAAACTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000136331.8 ENSMUST00000169241.8 |
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| CDS GCA 72 bp | GGCGCGACGGGTGAGCTCCGTACGCAGGCGCGTCACTaGTGTCGCCATTTCGCGGGTCGAGCCTCCGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GATGELRTQARH*CRHFAGRASAF Trigger: GAAGGCGGAGGCTCGACCCGCGAAATGGCGACAGCAGTGACGCGCCTGCGTACGGAGCTCACCCGTCGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS GCA 72 bp | AACCCTCGGCCGCTCGTGGCCGGAGACAGCTGCGGCTaGTGTGAGTGCTGCTCAAGGCGAGCAGACCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: NPRPLVAGDSCG*CECCSRRADLR Trigger: GCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGGGTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS TCA 72 bp | GAAAACCTCACTTCCCGTCGTCCGCGGCGCGACGGGTaGGCTCCGTACGCAGGCGCGTCACTGCTGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ENLTSRRPRRDG*APYAGASLLSP Trigger: TGGCGACAGCAGTGACGCGCCTGCGTACGGAGCTCACCCGTCGCGCCGCGGACGACGGGAAGTGAGGTTTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS TCA 72 bp | TCGGCCGCTCGTGGCCGGAGACAGCTGCGGCTGCTGTaGGTGCTGCTCAAGGCGAGCAGACCTCCGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SAARGRRQLRLL*VLLKASRPPRL Trigger: AAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS GCA 72 bp | TCCCGTAACCCTCGGCCGCTCGTGGCCGGAGACAGCTaGGGCTGCTGTGAGTGCTGCTCAAGGCGAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRNPRPLVAGDS*GCCECCSRRAD Trigger: GTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGGGTTACGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS CCA 72 bp | TGGAGGACGGAGAGTCCCGTAACCCTCGGCCGCTCGTaGCCGGAGACAGCTGCGGCTGCTGTGAGTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: WRTESPVTLGRS*PETAAAAVSAA Trigger: AGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGGCCGAGGGTTACGGGACTCTCCGTCCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS TCA 72 bp | GGGCTCGAAGTCGCCGTACACTTCTGCCGGCTCCTCTaGAAACCTCACTTCCCGTCGTCCGCGGCGCGACGG | + |
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Preference number: 6 (lower is better) Translates to: GLEVAVHFCRLL*KPHFPSSAARR Trigger: CCGTCGCGCCGCGGACGACGGGAAGTGAGGTTTTCAGAGGAGCCGGCAGAAGTGTACGGCGACTTCGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS GCA 72 bp | CCGCTCGTGGCCGGAGACAGCTGCGGCTGCTGTGAGTaGTGCTCAAGGCGAGCAGACCTCCGCGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PLVAGDSCGCCE*CSRRADLRVFI Trigger: GATGAAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAGCGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS GCA 72 bp | CTCGTGGCCGGAGACAGCTGCGGCTGCTGTGAGTGCTaGTCAAGGCGAGCAGACCTCCGCGTCTTCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVAGDSCGCCEC*SRRADLRVFIS Trigger: GGAGATGAAGACGCGGAGGTCTGCTCGCCTTGAGCAGCACTCACAGCAGCCGCAGCTGTCTCCGGCCACGAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000123705.8 ENSMUST00000130995.4 ENSMUST00000136331.8 |
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| CDS TCA 72 bp | TGGATGATTGCCAGCTGCTGGGGTGGCTTCATCTCTTaGCTCAAGAGAATCGCTGGATCTGGCCCTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: WMIASCWGGFIS*LKRIAGSGPDS Trigger: ACTATCAGGGCCAGATCCAGCGATTCTCTTGAGTCAAGAGATGAAGCCACCCCAGCAGCTGGCAATCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| CDS CCA 72 bp | CCCTCAGTGAATCTGGATGATTGCCAGCTGCTGGGGTaGCTTCATCTCTTGACTCAAGAGAATCGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: PSVNLDDCQLLG*LHLLTQENRWI Trigger: GATCCAGCGATTCTCTTGAGTCAAGAGATGAAGCCACCCCAGCAGCTGGCAATCATCCAGATTCACTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136331.8 |
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| CDS TCA 72 bp | AGAAGGTTCATTTGGGTGATGGATAGCCGATTCTCTTaGCTCAAGAGAATCGCTGGATCTGGCCCTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: RRFIWVMDSRFS*LKRIAGSGPDS Trigger: ACTATCAGGGCCAGATCCAGCGATTCTCTTGAGTCAAGAGAATCGGCTATCCATCACCCAAATGAACCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
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| CDS TCA 72 bp | AGCCACCACTTTATCTTGACAGAAGGTTCATTTGGGTaGTGGATAGCCGATTCTCTTGACTCAAGAGAATCG | + |
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Preference number: 6 (lower is better) Translates to: SHHFILTEGSFG*WIADSLDSRES Trigger: CGATTCTCTTGAGTCAAGAGAATCGGCTATCCATCACCCAAATGAACCTTCTGTCAAGATAAAGTGGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027738.14 |
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| CDS CAA 72 bp | TCGAGATCATCTTCGGTTTCTCCTTCTTCGAAGAAATaGACCTGCTGGACAATGGTAGCTTCTCTTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SRSSSVSPSSKK*TCWTMVASLSF Trigger: GAATGAAAGAGAAGCTACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGGAGAAACCGAAGATGATCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 ENSMUST00000136397.8 ENSMUST00000141878.8 ENSMUST00000169241.8 |
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| CDS GCA 72 bp | TCATCTTCGGTTTCTCCTTCTTCGAAGAAATTGACCTaGTGGACAATGGTAGCTTCTCTTTCATTCGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSVSPSSKKLT*WTMVASLSFVL Trigger: TAAAACGAATGAAAGAGAAGCTACCATTGTCCAGCAGGTCAATTTCTTCGAAGAAGGAGAAACCGAAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027738.14 ENSMUST00000097527.10 ENSMUST00000130995.4 ENSMUST00000136331.8 ENSMUST00000136397.8 ENSMUST00000141878.8 ENSMUST00000169241.8 |
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