Pregenerated sensors for TOPORSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028314Ensembl transcript IDs: ENSMUST00000029995.6, ENSMUST00000107671.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTTGGCTAGAAGGTTCTaGAGTCTTGAATTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLARRF*SLEFLS Trigger: AGAAAGGAATTCAAGACTTCAGAACCTTCTAGCCAA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGCCACCCTGTAGGTTaGTTCACAGCCATGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSCHPVG*FTAMST Trigger: AGTGCTCATGGCTGTGAATCAACCTACAGGGTGGCA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCCCCCAAGTCATCCCTaGATTCTGCTGTGGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSPPSHP*ILLWFV Trigger: CACAAACCACAGCAGAATTCAGGGATGACTTGGGGG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTCAAGGACACAGAGTaGGGTGGAAGCCTCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLKDTE*GGSLSL Trigger: CAATGAGAGGCTTCCACCCCACTCTGTGTCCTTGAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGAAGGAGAGCTCCTGTaGGAAAGAAAAGGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSEGELL*ERKGWS Trigger: GCTCCAGCCTTTTCTTTCCCACAGGAGCTCTCCTTC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTCGTTGAGATTTCATaGAGGAGAGCTCCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLVEIS*RRAPVG Trigger: TCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGGATCTGGGTGTCCTaGGACTGTATTGTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSWIWVS*DCIVFG Trigger: CCCAAAGACAATACAGTCCCAGGACACCCAGATCCA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTAGAGAGAGATTACTCTaGCCTCTGCTCATGGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSRERLL*PLLMDC Trigger: GCAATCCATGAGCAGAGGTCAGAGTAATCTCTCTCT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTATGAGCACTTCCTTTTaGCAGTGCACAGTGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSMSTSF*QCTVLA Trigger: AGCAAGCACTGTGCACTGTCAAAAGGAAGTGCTCAT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCAATGTCCTCCAGTTTaGGATTCACCTTCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSQCPPV*DSPSPM Trigger: CATGGGTGAAGGTGAATCTCAAACTGGAGGACATTG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACAGTGCACAGTGCTTaGTTCTGTGACTTTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTVHSA*FCDFPS Trigger: TGAGGGAAAGTCACAGAAGCAAGCACTGTGCACTGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACTCTACCAACTAGGTaGTTCCCCTTCATACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTLPTR*FPFIPS Trigger: GCTTGGTATGAAGGGGAAGCACCTAGTTGGTAGAGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTTTAGATCCTGGACATaGCCAGGAGGCAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSFRSWT*PGGSFV Trigger: CACAAAACTGCCTCCTGGCCATGTCCAGGATCTAAA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACCAGGATTTGGATCTaGGTGTCCTGGGACTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTRIWI*VSWDCI Trigger: AATACAGTCCCAGGACACCCAGATCCAAATCCTGGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTAAAGGAAGCGTTGCATaGTGGGAGAGATTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSKGSVA*WERLWI Trigger: AATCCACAATCTCTCCCATCATGCAACGCTTCCTTT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGCTTTATGCCTCGTTaGGATTTCATGAAGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSCFMPR*DFMKES Trigger: GCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACTGATAGATGGCATTaGGGTCATAGGTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTDRWH*GHRSPC Trigger: ACATGGAGACCTATGACCGCAATGCCATCTATCAGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTGGAGCTGAAACCGTaGTCTTCTTTTTCGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLELKP*SSFSNS Trigger: AGAGTTCGAAAAAGAAGAGCACGGTTTCAGCTCCAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACATGGTCTCTAAAATaGCTCAAGGACACAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTWSLK*LKDTEW Trigger: CCACTCTGTGTCCTTGAGCCATTTTAGAGACCATGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTCATTAGAACAACACTaGGAAAGGAAGCGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSSLEQH*ERKRCM Trigger: CATGCAACGCTTCCTTTCTCAGTGTTGTTCTAATGA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTGAGGTTTTGTGTTTaGGAGAAGTCCACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLRFCV*EKSTEL Trigger: AAGTTCTGTGGACTTCTCTCAAACACAAAACCTCAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTCTTTGATGTCTGGCTaGGGTTTTGTGTTTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSSLMSG*GFVFER Trigger: TCTCTCAAACACAAAACCTCAGCCAGACATCAAAGA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCAGGAGGCAGTTTTGTaGTTTCTGACTTTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSQEAVL*FLTFSL Trigger: GAGAGAAAAAGTCAGAAAGCACAAAACTGCCTCCTG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTATTCCAGGTCTTCTTaGACTGCTTTATGCCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSYSRSS*TALCLV Trigger: AACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTATCCCCACTCATCTTTaGTCCAAACATGGCGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSIPTHL*SKHGVY Trigger: ATAAACGCCATGTTTGGACCAAAGATGAGTGGGGAT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGGACTGTATTGTCTTTaGGTTCTTCTACTGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSGLYCL*VLLLWC Trigger: ACACCACAGTAGAAGAACCCAAAGACAATACAGTCC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTTATTTGCTGGTTTCTaGTGGGTTGTTGAGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLFAGF*WVVEIW Trigger: CCAAATCTCAACAACCCATCAGAAACCAGCAAATAA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTATAAGCCCAATTCAGTaGATTAGTAGTACACACCAC | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSISPIQ*ISSTHH Trigger: GTGGTGTGTACTACTAATTCACTGAATTGGGCTTAT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTTTGGACTTGTTTCATaGCTCTTTAGATCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSFGLVS*LFRSWT Trigger: TGTCCAGGATCTAAAGAGTCATGAAACAAGTCCAAA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTAACATGGCGTTTATTTaGTGGTTTCTGATGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSNMAFI*WFLMGC Trigger: ACAACCCATCAGAAACCAGCAAATAAACGCCATGTT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR GCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCCATGGATGCACATTTaGAATTCTTTCCAGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSPWMHI*NSFQLL Trigger: TAACAGCTGGAAAGAATTGCAAATGTGCATCCATGG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTATTCACCTTCACCCATaGATGCACATTTGCAATTCT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSIHLHP*MHICNS Trigger: AGAATTGCAAATGTGCATCCATGGGTGAAGGTGAAT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTAAACTGATAAACTCATaGAGAAAGTGCTGGGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSKLINS*RKCWVY Trigger: ATACACCCAGCACTTTCTTCATGAGTTTATCAGTTT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR TCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGTCACACATTCAGGATaGGAATTCAAAAAGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSVTHSG*EFKKPF Trigger: AAAAGGCTTTTTGAATTCTCATCCTGAATGTGTGAC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTTGCTCAGTAGTTCTTaGATAGTCAGTTCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLLSSS*IVSSLN Trigger: ATTGAGAGAACTGACTATCCAAGAACTACTGAGCAA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTCAAGATTCTTTCTTTaGGCAATCTTTGAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSSRFFL*AIFEEP Trigger: AGGCTCTTCAAAGATTGCCCAAAGAAAGAATCTTGA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGCTCTAAAGATGTTTaGACTTGTTTCATGACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NEPWWLSRLICLSKPLRSCSKDV*TCFMTL Trigger: AAGAGTCATGAAACAAGTCCAAACATCTTTAGAGCA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 90 bp | TATTCCAGGTCTTCTTGGACTGCTTTATGCCTCGTTGAGATTTCATaGAGGAGAGCTCCTGTGGGAAAGAAAAGGCTGGAGCTGAAACCG | + |
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Preference number: 5 (lower is better) Translates to: YSRSSWTALCLVEIS*RRAPVGKKRLELKP Trigger: CGGTTTCAGCTCCAGCCTTTTCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 90 bp | TGCCCAGTCTTATTCCAGGTCTTCTTGGACTGCTTTATGCCTCGTTaGGATTTCATGAAGGAGAGCTCCTGTGGGAAAGAAAAGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: CPVLFQVFLDCFMPR*DFMKESSCGKEKAG Trigger: TCCAGCCTTTTCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATAAGACTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS GCA 90 bp | TTGATTCACAGCCATGAGCACTTCCTTTTGACAGTGCACAGTGCTTaGTTCTGTGACTTTCCCTCAGAGAGAGATTACTCTGACCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LIHSHEHFLLTVHSA*FCDFPSERDYSDLC Trigger: GCAGAGGTCAGAGTAATCTCTCTCTGAGGGAAAGTCACAGAAGCAAGCACTGTGCACTGTCAAAAGGAAGTGCTCATGGCTGTGAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CCA 90 bp | ACACACCAGGATTTGGATCTGGGTGTCCTGGGACTGTATTGTCTTTaGGTTCTTCTACTGTGGTGTGAACCAACTTCTACACATTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: THQDLDLGVLGLYCL*VLLLWCEPTSTHWE Trigger: CTCCCAATGTGTAGAAGTTGGTTCACACCACAGTAGAAGAACCCAAAGACAATACAGTCCCAGGACACCCAGATCCAAATCCTGGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CCA 90 bp | AACTTCACAACCACATGGTCTCTAAAATGGCTCAAGGACACAGAGTaGGGTGGAAGCCTCTCATTGTCTCCAAACTTGCTCAGTAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: NFTTTWSLKWLKDTE*GGSLSLSPNLLSSS Trigger: AGAACTACTGAGCAAGTTTGGAGACAATGAGAGGCTTCCACCCCACTCTGTGTCCTTGAGCCATTTTAGAGACCATGTGGTTGTGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACCAACTTCTACACATaGGGAGGACTGGCTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTNFYT*GGLAAP Trigger: AGGTGCAGCCAGTCCTCCCAATGTGTAGAAGTTGGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGGTGGAAGCCTCTCATaGTCTCCAAACTTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSGGSLS*SPNLLS Trigger: ACTGAGCAAGTTTGGAGACAATGAGAGGCTTCCACC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CCA 90 bp | CCGTGCTCTTCTTTTTCGAACTCTTTGAAACAGGACACTGATAGATaGCATTGCGGTCATAGGTCTCCATGTTGTAAGATGAATCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PCSSFSNSLKQDTDR*HCGHRSPCCKMNQQ Trigger: TTGTTGATTCATCTTACAACATGGAGACCTATGACCGCAATGCCATCTATCAGTGTCCTGTTTCAAAGAGTTCGAAAAAGAAGAGCACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTAACGTGAAGTCTTCCTaGTTAGTGCTCCCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSNVKSS*LVLPSS Trigger: TGAACTGGGGAGCACTAACAAGGAAGACTTCACGTT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGTCTGGCTGAGGTTTaGTGTTTGAGAGAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSCLAEV*CLREVH Trigger: GTGGACTTCTCTCAAACACAAAACCTCAGCCAGACA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGGCCAGGAGGCAGTTTaGTGCTTTCTGACTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSGQEAV*CFLTFS Trigger: AGAAAAAGTCAGAAAGCACAAAACTGCCTCCTGGCC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGGGACTGTATTGTCTTaGGGTTCTTCTACTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSGTVLS*GSSTVV Trigger: CACCACAGTAGAAGAACCCAAAGACAATACAGTCCC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTGCTGAGGTTTTGTGTTaGAGAGAAGTCCACAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSAEVLC*REVHRT Trigger: AGTTCTGTGGACTTCTCTCAAACACAAAACCTCAGC...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTGCTTTATGCCTCGTaGAGATTTCATGAAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLLYAS*RFHEGE Trigger: CTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGTCCTGGGACTGTATaGTCTTTGGGTTCTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSCPGTV*SLGSST Trigger: AGTAGAAGAACCCAAAGACAATACAGTCCCAGGACA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTACAATGTCCTCCAGTTaGAGATTCACCTTCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSTMSSS*RFTFTH Trigger: ATGGGTGAAGGTGAATCTCAAACTGGAGGACATTGT...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTCTGGTTTCTGATGGGTaGTTGAGATTTGGGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSLVSDG*LRFGDF Trigger: AAAATCCCCAAATCTCAACAACCCATCAGAAACCAG...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTCATACCAAGCTTACTaGGAGAGTGACATTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSSYQAY*ESDISQ Trigger: CTGAGAAATGTCACTCTCCAAGTAAGCTTGGTATGA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS GCA 90 bp | TTTCATGACTCTTTAGATCCTGGACATGGCCAGGAGGCAGTTTTGTaGTTTCTGACTTTTTCTCTCGGTTATCATTTCTATAATACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHDSLDPGHGQEAVL*FLTFSLGYHFYNTL Trigger: AAGAGTATTATAGAAATGATAACCGAGAGAAAAAGTCAGAAAGCACAAAACTGCCTCCTGGCCATGTCCAGGATCTAAAGAGTCATGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTGGTATTTGGGTTTTTaGCGCCTATGTGTTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSWYLGF*RLCVLI Trigger: AATCAGAACACATAGGCGCAAAAAACCCAAATACCA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGCCTTGGTGGCTAAGTAGACTAATTTGCCTTTCAAAACCACTTAGATCTTCTTTTTCGAACTCTTaGAAACAGGACACTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: NEPWWLSRLICLSKPLRSSFSNS*KQDTDR Trigger: TCTATCAGTGTCCTGTTTCAAAGAGTTCGAAAAAGA...AGATCTAAGTGGTTTTGAAAGGCAAATTAGTCTACTTAGCCACCAAGGCTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CAA 90 bp | AAACCTGGTCATGGTGGACTGGGCTCAAAGATGCCACCCTGTAGGTaGATTCACAGCCATGAGCACTTCCTTTTGACAGTGCACAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KPGHGGLGSKMPPCR*IHSHEHFLLTVHSA Trigger: AGCACTGTGCACTGTCAAAAGGAAGTGCTCATGGCTGTGAATCAACCTACAGGGTGGCATCTTTGAGCCCAGTCCACCATGACCAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CCA 72 bp | ACCACATGGTCTCTAAAATGGCTCAAGGACACAGAGTaGGGTGGAAGCCTCTCATTGTCTCCAAACTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TTWSLKWLKDTE*GGSLSLSPNLL Trigger: GAGCAAGTTTGGAGACAATGAGAGGCTTCCACCCCACTCTGTGTCCTTGAGCCATTTTAGAGACCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CAA 90 bp | CTGCCCAGTCTTATTCCAGGTCTTCTTGGACTGCTTTATGCCTCGTaGAGATTTCATGAAGGAGAGCTCCTGTGGGAAAGAAAAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSLIPGLLGLLYAS*RFHEGELLWERKGW Trigger: CCAGCCTTTTCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATAAGACTGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CAA 90 bp | AAGATGCCACCCTGTAGGTTGATTCACAGCCATGAGCACTTCCTTTaGACAGTGCACAGTGCTTGCTTCTGTGACTTTCCCTCAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KMPPCRLIHSHEHFL*TVHSACFCDFPSER Trigger: TCTCTCTGAGGGAAAGTCACAGAAGCAAGCACTGTGCACTGTCAAAAGGAAGTGCTCATGGCTGTGAATCAACCTACAGGGTGGCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | TTTGGCTTTTATCCTCGAGATCCCCCAAGTCATCCCTaGATTCTGCTGTGGTTTGTGTACCCACACACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FGFYPRDPPSHP*ILLWFVYPHTG Trigger: ACCAGTGTGTGGGTACACAAACCACAGCAGAATTCAGGGATGACTTGGGGGATCTCGAGGATAAAAGCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS GCA 72 bp | CCCTTAGGAAACTGTTTCAAGCCAGAGTCAGAGCTCTaGCCAGTCTTATTCCAGGTCTTCTTGGACTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLGNCFKPESEL*PVLFQVFLDCF Trigger: AAAGCAGTCCAAGAAGACCTGGAATAAGACTGGGCAGAGCTCTGACTCTGGCTTGAAACAGTTTCCTAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS GCA 72 bp | TTTATCCTCGAGATCCCCCAAGTCATCCCTGAATTCTaGTGTGGTTTGTGTACCCACACACTGGTATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FILEIPQVIPEF*CGLCTHTLVFG Trigger: CCCAAATACCAGTGTGTGGGTACACAAACCACAGCAGAATTCAGGGATGACTTGGGGGATCTCGAGGATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CAA 90 bp | GTGACTTTCCCTCAGAGAGAGATTACTCTGACCTCTGCTCATGGATaGCTTTCTAATTCTGACACACCAGGATTTGGATCTGGGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VTFPQREITLTSAHG*LSNSDTPGFGSGCP Trigger: AGGACACCCAGATCCAAATCCTGGTGTGTCAGAATTAGAAAGCAATCCATGAGCAGAGGTCAGAGTAATCTCTCTCTGAGGGAAAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | CTGGTCTTCTTTGATGTCTGGCTGAGGTTTTGTGTTTaGGAGAAGTCCACAGAACTTTCCTCCTCTGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVFFDVWLRFCV*EKSTELSSSEA Trigger: CGCTTCAGAGGAGGAAAGTTCTGTGGACTTCTCTCAAACACAAAACCTCAGCCAGACATCAAAGAAGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | TCTTCTTGGACTGCTTTATGCCTCGTTGAGATTTCATaGAGGAGAGCTCCTGTGGGAAAGAAAAGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSWTALCLVEIS*RRAPVGKKRLE Trigger: CTCCAGCCTTTTCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | TCCTTGTTAGTGCTCCCCAGTTCATTAGAACAACACTaGGAAAGGAAGCGTTGCATGATGGGAGAGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLVLPSSLEQH*ERKRCMMGEIV Trigger: CACAATCTCTCCCATCATGCAACGCTTCCTTTCTCAGTGTTGTTCTAATGAACTGGGGAGCACTAACAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CCA 72 bp | GATTTGGATCTGGGTGTCCTGGGACTGTATTGTCTTTaGGTTCTTCTACTGTGGTGTGAACCAACTTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: DLDLGVLGLYCL*VLLLWCEPTST Trigger: TGTAGAAGTTGGTTCACACCACAGTAGAAGAACCCAAAGACAATACAGTCCCAGGACACCCAGATCCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CAA 72 bp | CTTATTCCAGGTCTTCTTGGACTGCTTTATGCCTCGTaGAGATTTCATGAAGGAGAGCTCCTGTGGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIPGLLGLLYAS*RFHEGELLWER Trigger: TCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS CAA 90 bp | AATTCTGCTGTGGTTTGTGTACCCACACACTGGTATTTGGGTTTTTaGCGCCTATGTGTTCTGATTCTCGTAACTCTACCAACTAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSAVVCVPTHWYLGF*RLCVLILVTLPTRC Trigger: GCACCTAGTTGGTAGAGTTACGAGAATCAGAACACATAGGCGCAAAAAACCCAAATACCAGTGTGTGGGTACACAAACCACAGCAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | TTATTCCAGGTCTTCTTGGACTGCTTTATGCCTCGTTaGGATTTCATGAAGGAGAGCTCCTGTGGGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFQVFLDCFMPR*DFMKESSCGKE Trigger: TTCTTTCCCACAGGAGCTCTCCTTCATGAAATCTCAACGAGGCATAAAGCAGTCCAAGAAGACCTGGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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| CDS TCA 72 bp | TCTACCAATGCTCTAAAGATGTTTGGACTTGTTTCATaGCTCTTTAGATCCTGGACATGGCCAGGAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STNALKMFGLVS*LFRSWTWPGGS Trigger: ACTGCCTCCTGGCCATGTCCAGGATCTAAAGAGTCATGAAACAAGTCCAAACATCTTTAGAGCATTGGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CAA 72 bp | GACTCTTTAGATCCTGGACATGGCCAGGAGGCAGTTTaGTGCTTTCTGACTTTTTCTCTCGGTTATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: DSLDPGHGQEAV*CFLTFSLGYHF Trigger: GAAATGATAACCGAGAGAAAAAGTCAGAAAGCACAAAACTGCCTCCTGGCCATGTCCAGGATCTAAAGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CAA 72 bp | GTGGTTTGTGTACCCACACACTGGTATTTGGGTTTTTaGCGCCTATGTGTTCTGATTCTCGTAACTCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: VVCVPTHWYLGF*RLCVLILVTLP Trigger: TGGTAGAGTTACGAGAATCAGAACACATAGGCGCAAAAAACCCAAATACCAGTGTGTGGGTACACAAACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CCA 72 bp | CACAATGTCCTCCAGTTTGAGATTCACCTTCACCCATaGATGCACATTTGCAATTCTTTCCAGCTGTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HNVLQFEIHLHP*MHICNSFQLLN Trigger: GTTTAACAGCTGGAAAGAATTGCAAATGTGCATCCATGGGTGAAGGTGAATCTCAAACTGGAGGACATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS GCA 72 bp | TCGAACTCTTTGAAACAGGACACTGATAGATGGCATTaGGGTCATAGGTCTCCATGTTGTAAGATGAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: SNSLKQDTDRWH*GHRSPCCKMNQ Trigger: TTGATTCATCTTACAACATGGAGACCTATGACCGCAATGCCATCTATCAGTGTCCTGTTTCAAAGAGTTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS GCA 72 bp | TCTTTAGATCCTGGACATGGCCAGGAGGCAGTTTTGTaGTTTCTGACTTTTTCTCTCGGTTATCATTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SLDPGHGQEAVL*FLTFSLGYHFY Trigger: ATAGAAATGATAACCGAGAGAAAAAGTCAGAAAGCACAAAACTGCCTCCTGGCCATGTCCAGGATCTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CCA 72 bp | AGCCTCTCATTGTCTCCAAACTTGCTCAGTAGTTCTTaGATAGTCAGTTCTCTCAATGATCTGGTCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLSPNLLSSS*IVSSLNDLVFF Trigger: AAAGAAGACCAGATCATTGAGAGAACTGACTATCCAAGAACTACTGAGCAAGTTTGGAGACAATGAGAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS CCA 72 bp | TCTTTTTCGAACTCTTTGAAACAGGACACTGATAGATaGCATTGCGGTCATAGGTCTCCATGTTGTAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SFSNSLKQDTDR*HCGHRSPCCKM Trigger: CATCTTACAACATGGAGACCTATGACCGCAATGCCATCTATCAGTGTCCTGTTTCAAAGAGTTCGAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
||
| CDS TCA 72 bp | GTGAAAGCTTCACTGTTCAAGTTAAATTTCGTCATGTaGTGGAGAATGGCAGTTAGGATATTCTTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VKASLFKLNFVM*WRMAVRIFFTV Trigger: CACAGTGAAGAATATCCTAACTGCCATTCTCCATCACATGACGAAATTTAACTTGAACAGTGAAGCTTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029995.6 ENSMUST00000107671.2 |
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