Pregenerated sensors for TOPBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032555Ensembl transcript IDs: ENSMUST00000035164.10, ENSMUST00000185305.2, ENSMUST00000185721.2, ENSMUST00000187065.2
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCCGGATTCTTGACTTTGCTGGATTCTTTTCCTCCATCTCATTaGCGCCAGTGCGAGCTTCTGCTGGTGCTCAGTGACGTCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: NAGFLTLLDSFPPSH*RQCELLLVLSDVRE Trigger: CTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCAAAGTCAAGAATCCGGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| 3UTR CAA 90 bp | TTTCCAGCCACTAAATGCTCCCTCAACAATGCCGGATTCTTGACTTaGCTGGATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FPATKCSLNNAGFLT*LDSFPPSHCRQCEL Trigger: AAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCAAAGTCAAGAATCCGGCATTGTTGAGGGAGCATTTAGTGGCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGAGGATCATTAGAATCTaGAGCATAGTCCTTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWRIIRI*SIVLQM Trigger: CATCTGAAGGACTATGCTTCAGATTCTAATGATCCT...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| 3UTR-3UTR CCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTACTCAAAAACATTCGTTaGGTGGTTGTGTATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YFKFRAPASLLNSLLRLLLKNIR*VVVYGS Trigger: TGAGCCATACACAACCACCCAACGAATGTTTTTGAG...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACAAACTGCTACACAAATaGATCACAGCAATGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ISKFWCPSLANDRSLYIHKLLHK*ITAMFR Trigger: CCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTT...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| 3UTR GCA 72 bp | CTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTaGTGGTGCTCAGTGACGTCAGGGAGAGCATCAAGT | + |
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Preference number: 3 (lower is better) Translates to: LFLHLIAASASF*WCSVTSGRASS Trigger: ACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| 3UTR GCA 72 bp | TTGCTGGATTCTTTTCCTCCATCTCATTGCCGCCAGTaGGAGCTTCTGCTGGTGCTCAGTGACGTCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLDSFPPSHCRQ*ELLLVLSDVRE Trigger: CTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| 3UTR CCA 72 bp | TTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTaGTGCTCAGTGACGTCAGGGAGAGCATCAAGTATG | + |
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Preference number: 3 (lower is better) Translates to: FLHLIAASASFC*CSVTSGRASSM Trigger: CATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| CDS-3UTR CCA 90 bp | GCTGGATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTGGTGCTCTTGTCTGCAGGTTGTaGGGCCACAGGCGGCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: AGFFSSISLPPVRASAGALVCRL*GHRRLS Trigger: GCTAAGCCGCCTGTGGCCCCACAACCTGCAGACAAG...AGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGGCTACAGCGGGGGCTTaGGGCTCGGGGATCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWATAGA*GSGIKG Trigger: GCCTTTGATCCCCGAGCCGCAAGCCCCCGCTGTAGC...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCCTGCCCCCTCTGCTGTaGAATGACAGCACGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGLPPLL*NDSTEG Trigger: GCCTTCCGTGCTGTCATTTCACAGCAGAGGGGGCAG...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCGGAAAGGTGGGGTCCTaGCCCCTCTGCTGTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGGKVGS*PLCCEM Trigger: CATTTCACAGCAGAGGGGGCAGGACCCCACCTTTCC...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCCCCTCTGCTGTGAAATaGCAGCACGGAAGGCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGPSAVK*QHGRLY Trigger: GTAGAGCCTTCCGTGCTGTCATTTCACAGCAGAGGG...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAGGGTGCCCTGGGGCTTaGGTAACACACGAGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLGCPGA*VTHEAC Trigger: GCAGGCCTCGTGTGTTACTCAAGCCCCAGGGCACCC...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCTGGATGCTCAGCTCTTaGGACACATTGCTGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGWMLSS*DTLLVA Trigger: CGCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCA...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCTGCAGGGTCACACAGTaGACATTCCATCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGCRVTQ*TFHLLA Trigger: TGCCAGGAGATGGAATGTGCACTGTGTGACCCTGCA...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCACAATGCAGGTGGCTaGCATGATCTCTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWHNAGG*HDLLQL Trigger: CAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTG...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAACATCAGGCACTGCCTaGCGAGACTGCCTGAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLTSGTA*RDCLSA Trigger: GGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGT...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | GCTGGATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTGGTGCTTTTTTAACTTTTCTGTaGGTCTCCTCCTGTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: AGFFSSISLPPVRASAGAFLTFL*VSSCVS Trigger: TGAAACACAGGAGGAGACGCACAGAAAAGTTAAAAA...AGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGTACTGGTGGAAAGGTaGGGTCCTGCCCCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGVLVER*GPAPSA Trigger: AGCAGAGGGGGCAGGACCCCACCTTTCCACCAGTAC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAGGCCTTTCTGCTACTaGAGGCTCTGGTTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGRPFCY*RLWFFR Trigger: TCTGAAGAACCAGAGCCTCCAGTAGCAGAAAGGCCT...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGTCGTCATTTCCATACTaGGCAAGCAGATCCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWSSFPY*ASRSSS Trigger: CGACGAGGATCTGCTTGCTCAGTATGGAAATGACGA...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCCTGCTCAGCAATTTCTaGATGGTACACAGGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGLLSNF*MVHRLS Trigger: CGAAAGCCTGTGTACCATTCAGAAATTGCTGAGCAG...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAGAAACTGCCAAGGGTaGCCGGCTGTTACAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLRNCQG*PAVTEP Trigger: CGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCT...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGTTCACATCAGGCACTaGCTGCCGAGACTGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGVHIRH*LPRLPE Trigger: CTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAAC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCACCTTTGCTCCTCCTaGCTGAAGAAGGCGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWHLCSS*LKKAFE Trigger: TTCAAACGCCTTCTTCAGGCAGGAGGAGCAAAGGTG...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGGGGACACATTGCTGGTaGCGCATACAAAATGTGACC | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWGTHCW*RIQNVT Trigger: GGTCACATTTTGTATGCGCCACCAGCAATGTGTCCC...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTTGGTTCTTCAGAGCCTaGGTGCCCTGGGGCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCWFFRA*VPWGLS Trigger: ACTCAAGCCCCAGGGCACCCAGGCTCTGAAGAACCA...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| 3UTR CAA 72 bp | ACTAAATGCTCCCTCAACAATGCCGGATTCTTGACTTaGCTGGATTCTTTTCCTCCATCTCATTGCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TKCSLNNAGFLT*LDSFPPSHCRQ Trigger: CTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCAAAGTCAAGAATCCGGCATTGTTGAGGGAGCATTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAAATGTGACCACTTaGGGACCAACAATCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWQNVTT*GPTILQ Trigger: CTGCAGGATTGTTGGTCCTCAAGTGGTCACATTTTG...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACATCCTCGTCGGCCTGCTaGAGCCTCTCAGCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTSSSAC*SLSAGT Trigger: TGTTCCTGCTGAGAGGCTTCAGCAGGCCGACGAGGA...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCCACTCTGCTTCTTACTaGGCTTCTTACTCACACACA | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGHSASY*ASYSHT Trigger: TGTGTGTGAGTAAGAAGCTCAGTAAGAAGCAGAGTG...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTAGCGCTGTCAGGAGTTaGAGAGGCGCTGTTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGSAVRS*RGAVTA Trigger: AGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCT...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCCTGAAGAAGGCGTTTaGACCCAGCTTCTCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYPEEGV*TQLLGA Trigger: GGCCCCGAGAAGCTGGGTTCAAACGCCTTCTTCAGG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTATGGGGTTTCCAGGGCTaGAAGTGCATCCGTCACATC | + |
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Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLWGFQG*KCIRHI Trigger: GATGTGACGGATGCACTTGCAGCCCTGGAAACCCCA...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCATGATCTCTTGCAGCTaGTTCTGGAAGTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGMISCS*FWKFSL Trigger: GAGAGAGAACTTCCAGAAGCAGCTGCAAGAGATCAT...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTCCACAACCATGTGTGTaGAGCTGGGGTCAGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGPQPCV*SWGQST Trigger: AGTGCTCTGACCCCAGCTGCACACACATGGTTGTGG...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAGAGGGGATTCGACTTaGGATCAACTAATGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGRGDST*DQLMSG Trigger: ACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCT...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATGCTGTGTGGGGTCGCTaGGCCACTGTAAGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYAVWGR*ATVSCW Trigger: CCAGCAACTTACAGTGGCCCAGCGACCCCACACAGC...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTATGCTACTGGAGGCTCTaGTTCTTCAGAGCCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLCYWRL*FFRAWV Trigger: CACCCAGGCTCTGAAGAACCAGAGCCTCCAGTAGCA...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACTTGTCTGCAGGTTGTaGGGCCACAGGCGGCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTLVCRL*GHRRLS Trigger: GCTAAGCCGCCTGTGGCCCCACAACCTGCAGACAAG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTCCATGTGTGTGCAGCTaGGGTCAGAGCACTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCPCVCS*GQSTAS Trigger: AGAAGCAGTGCTCTGACCCCAGCTGCACACACATGG...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCTCATCAAGGATGCAATaGCTGACAGACGACTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: APASLLNSLLRLLKRLNGSSRMQ*LTDDLF Trigger: AAACAAGTCGTCTGTCAGTCATTGCATCCTTGATGA...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTGTTGCTGGCAAGCCTTaGTCTCTCTTCCCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCVAGKP*SLFPCC Trigger: ACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAAC...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGAACTGCAATTCCAGCTaGCTGGTAGTTAGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWNCNSS*LVVSVD Trigger: ATCCACACTAACTACCAGCCAGCTGGAATTGCAGTT...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACTGGCTGGCAGCATTTaGGGTTTCCAGGGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTLAGSI*GFQGCK Trigger: CTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTCCTTCAGCTGAGGGCTaGCAGAATGACTGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCPSAEG*QNDCQC Trigger: ACACTGACAGTCATTCTGCCAGCCCTCAGCTGAAGG...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTAAGCAGACCATGTTCTaGGCAGTAGCCTCTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGKQTMF*AVASAM Trigger: CATCGCAGAGGCTACTGCCCAGAACATGGTCTGCTT...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGTTCTCAATACTGTCATaGAACCATTGCAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWFSILS*NHCRVT Trigger: TGTGACCCTGCAATGGTTTCATGACAGTATTGAGAA...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCACTCCCGACATTACTaGGACTGGTGTGAAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHHSRHY*DWCEEG Trigger: CCCCTCTTCACACCAGTCTCAGTAATGTCGGGAGTG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTCTGCTCCCACACACTaGCTGAAGGAAATCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGSAPTH*LKEITQ Trigger: CTGTGTGATTTCCTTCAGTCAGTGTGTGGGAGCAGA...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAGTTACAGCTGCTTCTTaGCATGCAAGTCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLVTAAS*HASLLG Trigger: GCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAAC...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTCTGCTGGTGCTCAGTaGCGTCAGGGAGAGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHSAGAQ*RQGEHQ Trigger: TTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCTCCAGCAACCACTTTaGTCCCACTACGTGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLQQPL*SHYVRP Trigger: AGGCCTCACGTAGTGGGAGCAAAGTGGTTGCTGGAG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGGAGCATGCCTTTCTTTaGATTGGCTTTGCGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWEHAFL*IGFANK Trigger: TTTGTTCGCAAAGCCAATGCAAAGAAAGGCATGCTC...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTGTGTGCTGGCGAGCATaGCTTTCTTTGCATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCVCWRA*LSLHWL Trigger: AAGCCAATGCAAAGAAAGGCATGCTCGCCAGCACAC...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACATCGTCCCAAATGATCTaGTCGTTCTGGGACGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTSSQMI*SFWDGS Trigger: GGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGA...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGCCACTGTAAGTTGCTaGCAAGCCTTGCTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGATVSC*QALLSL Trigger: AAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAGGAGAGCATCAAGTATaGAGCTACTTCCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLGEHQV*SYFPTR Trigger: ACGAGTGGGGAAGTAGCTCCATACTTGATGCTCTCC...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGGCGCATACAAAATGTaGCCACTTGAGGACCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGGAYKM*PLEDQQ Trigger: TTGTTGGTCCTCAAGTGGTCACATTTTGTATGCGCC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACGTGAGGCCTGTGAGATaGTTTGCTCCAGAACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHVRPVR*FAPELP Trigger: AGGCAGTTCTGGAGCAAATCATCTCACAGGCCTCAC...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTTCTTGCACAGAAATGTaGGTGGAATCATCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCSCTEM*VESSQG Trigger: GCCCTGTGATGATTCCACTCACATTTCTGTGCAAGA...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACATGCTGCGACCCCATTaGGCTCACTCTGCTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHMLRPH*AHSASY Trigger: GTAAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCAT...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATTTTGCTCCTCCTGCCTaGAGAAGGCGTTTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYFAPPA*RRRLNP Trigger: TGGGTTCAAACGCCTTCTTCAGGCAGGAGGAGCAAA...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAACTAAGTACTTTTTaGTCCCAACTTCTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWQLSTF*SQLLLQ Trigger: TTGCAGGAGAAGTTGGGAGCAAAAAGTACTTAGTTG...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCTTAGATGCAGAAACTaGCAAGGGTGCCCGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLRCRN*QGCPAV Trigger: AACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGCTGACATGATCTCTTaGAGCTGCTTCTGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGADMIS*SCFWKF Trigger: GAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACAAGCTGCTTCTTGACATaGAAGTCTTCTGGGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTSCFLT*KSSGQA Trigger: CGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCT...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACATGGGCCACTGTAAGTTaGTGGCAAGCCTTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTWATVS*WQALLS Trigger: AGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCA...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTACACGGTAATTGTCTaGACAAGGAGGGGATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGYTVIV*TRRGFQ Trigger: CTGGAATCCCCTCCTTGTGCAGACAATTACCGTGTA...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTCTTGGGACACATTGCTaGTGGCGCATACAAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGLGTHC*WRIQNV Trigger: CACATTTTGTATGCGCCACCAGCAATGTGTCCCAAG...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTCATTGCTCTGAGCAGTaGGTGTTGAAGTATCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGHCSEQ*VLKYQA Trigger: TGCCTGATACTTCAACACCCACTGCTCAGAGCAATG...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCTCACATCCCAGCAGTaGAACCACAGCATAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYLTSQQ*NHSIVS Trigger: GCTGACTATGCTGTGGTTCCACTGCTGGGATGTGAG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATGTTTCCGCTTCTGGCTaGCAGCATTTGGGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYVSASG*QHLGFP Trigger: TGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAAC...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCTCATCTCCAAGGCCTaGGTCAGAGCTCCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYLISKA*VRAPLQ Trigger: CTGTAAAGGAGCTCTGACCCAGGCCTTGGAGATGAG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTCCAAGCTGTTTAAGGTaGTCAAAAACAGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCPSCLR*SKTVPL Trigger: CAGTGGCACTGTTTTTGATCACCTTAAACAGCTTGG...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCTGAGCAGTGGGTGTTaGAGTATCAGGCACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYLSSGC*SIRHHL Trigger: AAGATGGTGCCTGATACTTCAACACCCACTGCTCAG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTCATCAAAGGATGGCTTaGAAAGCTTGTCCTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCHQRMA*KACPWT Trigger: TGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATG...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACCCATCATCCTTAGATaGAGAAACTGCCAAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTPIILR*RNCQGC Trigger: GCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACAGATCAAAGGCCTTTCTaGTACTGGAGGCTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTDQRPF*YWRLWF Trigger: GAACCAGAGCCTCCAGTAGCAGAAAGGCCTTTGATC...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGACAAGGAAACTCTTCTaGCTAAATAAGCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWTRKLF*LNKPSS Trigger: TGAAGAAGGCTTATTTAGCCAGAAGAGTTTCCTTGT...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACTTAGTTTCCGCTTCTaGCTGGCAGCATTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTLSFRF*LAAFGV Trigger: AACCCCAAATGCTGCCAGCCAGAAGCGGAAACTAAG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCTTTCAGCATTGCTCTaGGCAGTGGGTGTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLSALL*AVGVEV Trigger: TACTTCAACACCCACTGCTCAGAGCAATGCTGAAAG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTAGTAAAGGTTCTGGATaGCCAGATAACACCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCSKGSG*PDNTFA Trigger: AGCAAAGGTGTTATCTGGTCATCCAGAACCTTTACT...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAAATGGTTTTCATCTaGTCTCTTCCCGATTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLKMVFI*SLPDSR Trigger: GCGAGAATCGGGAAGAGAGCAGATGAAAACCATTTT...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAGTTTCGGGAACTATTTaGCAAAGCAACTGTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFKFRAPASLLNSLLRLLVSGTI*QSNCQV Trigger: AACCTGACAGTTGCTTTGGCAAATAGTTCCCGAAAC...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATTTTCCAGCCACTAAATaGTCCCTCAACAATGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYFPATK*SLNNAG Trigger: TCCGGCATTGTTGAGGGAGCATTTAGTGGCTGGAAA...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTGCACATTCCATCTCCTaGCACATTCGTATTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCMPLNCYTNASQQCSGCAHSIS*HIRIFV Trigger: GACAAAAATACGAATGTGCCAGGAGATGGAATGTGC...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCAAGGAATCTCTTTCTaGTCCCACACACTGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYQGISF*SHTLTE Trigger: TTCAGTCAGTGTGTGGGAGCAGAAAGAGATTCCTTG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTATCATGTTGTAGACTaGATGCTCAGCTCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHYHVVD*MLSSWD Trigger: GTCCCAAGAGCTGAGCATCCAGTCTACAACATGATA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTCTCCTGCAATAAGGTaGGTGACTGATACATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHSPAIR*VTDTLR Trigger: CCTTAATGTATCAGTCACTCACCTTATTGCAGGAGA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTTGGTTCTTGCACAATaGGGTGTGTACACTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLVLAQ*GVYTHS Trigger: TGAATGAGTGTACACACCTCATTGTGCAAGAACCAA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACTTGCTCCAAGGTaGTTTGCTAAGAATACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHTLAPR*FAKNTK Trigger: CTTGGTATTCTTAGCAAATCACCTTGGAGCAAGTGT...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCATCTTGCACTGTGTTaGTGTCCAAACTCATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYHLALC*CPNSFW Trigger: CCAAAATGAGTTTGGACATCAACACAGTGCAAGATG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATACAATGCCGGATTCTTaGCTTTGCTGGATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYTMPDS*LCWILF Trigger: GAAAAGAATCCAGCAAAGTCAAGAATCCGGCATTGT...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATTGTCCTTTTGGTTCTTaGACAATGAGGTGTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYCPFGS*TMRCVH Trigger: GTGTACACACCTCATTGTGCAAGAACCAAAAGGACA...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTTGTTCTTGTTTAGGTaGGTTGTCAACCAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FRCMPLNCYTNASQQCSGLFLFR*VVNQKM Trigger: CATTTTCTGGTTGACAACGCACCTAAACAAGAACAA...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTTAGCCGTGAGTTGCTaGACTGTCTTTCTGTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLAVSC*TVFLCI Trigger: AATACACAGAAAGACAGTCCAGCAACTCACGGCTAA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATTTTATGTTGGATATATaGCTGACATCTGCGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYFMLDI*LTSASV Trigger: CACGCTCGCAGATGTCAGCCATATATCCAACATAAA...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACGTCACATCAAAGGATaGCTTGAAAAGCTTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTRHIKG*LEKLVL Trigger: AAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACAAAAACAGTGCCACTaGAACGGTCACAGATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTQKQCH*NGHRYK Trigger: TTTATATCTGTGACCGTTTCAGTGGCACTGTTTTTG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATGAGCTTGAAACATACTaGTGTCCAGATTTTCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYELETY*CPDFLG Trigger: ACCTAGAAAATCTGGACATCAGTATGTTTCAAGCTC...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR TCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATATTTTTATCTCAACCTaGAGCTCAGAATGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYIFIST*SSECCV Trigger: CACACAGCATTCTGAGCTTCAGGTTGAGATAAAAAT...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACATTTGACTACATTCTCTaGAGGAGTTTTCCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTFDYIL*RSFPLL Trigger: CAGAAGAGGAAAACTCCTGCAGAGAATGTAGTCAAA...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACAGGGATTGTAAGTGTGTaGATAAAGAGATTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTGIVSV*IKRFRK Trigger: CTTCCTGAATCTCTTTATCCACACACTTACAATCCC...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR TCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACAATAAGGTGAGTGACTaGTACATTAAGGTCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHNKVSD*YIKVSV Trigger: TACAGAGACCTTAATGTATCAGTCACTCACCTTATT...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCACCCCTCTTTCCTTTaGAGATTTATATTCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHHPSFL*RFIFSI Trigger: AATCGAGAATATAAATCTGCAAAGGAAAGAGGGGTG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACATTTTTAACTTTTCTGTaGGTCTCCTCCTGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKFWCPSLANDRSLYIHTFLTFL*VSSCVS Trigger: TGAAACACAGGAGGAGACGCACAGAAAAGTTAAAAA...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACTGTCCAAACTCATTTTaGGATTGTAAGTGTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFWCPSLANDRSLYIHCPNSF*DCKCVD Trigger: ATCCACACACTTACAATCCCAAAATGAGTTTGGACA...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CCA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATCCACCTTTCTTATTATaGAATAAAGCAGCTTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYPPFLL*NKAASD Trigger: ATCCGAAGCTGCTTTATTCCATAATAAGAAAGGTGG...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | CGGCTCCGTGTTCACATCAGGCACTGCCTGCCGAGACTGCCTGAGTaGCTCCAGGACTCGGCTTCGTCCGCTCCGCACAGAGCGAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLRVHIRHCLPRLPE*LQDSASSAPHRASA Trigger: AGCGCTCGCTCTGTGCGGAGCGGACGAAGCCGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | ATCTGCTCGTTCTGGGACGGCTCCGTGTTCACATCAGGCACTGCCTaGCGAGACTGCCTGAGTGCCTCCAGGACTCGGCTTCGTCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICSFWDGSVFTSGTA*RDCLSASRTRLRPL Trigger: GAGCGGACGAAGCCGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | AATGATCTGCTCGTTCTGGGACGGCTCCGTGTTCACATCAGGCACTaGCTGCCGAGACTGCCTGAGTGCCTCCAGGACTCGGCTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NDLLVLGRLRVHIRH*LPRLPECLQDSASS Trigger: GGACGAAGCCGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | CCTGAAGCTCAGAATGCTGTGTGGGGTCGCTGGGCCACTGTAAGTTaGTGGCAAGCCTTGCTCTCTCTTCCCTTGCTGTCGGGTCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEAQNAVWGRWATVS*WQALLSLPLLSGRP Trigger: GGGACGACCCGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | CTCTCTTCCCTTGCTGTCGGGTCGTCCCAAATGATCTGCTCGTTCTaGGACGGCTCCGTGTTCACATCAGGCACTGCCTGCCGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLAVGSSQMICSF*DGSVFTSGTACRDC Trigger: GCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS CCA 90 bp | GGCTTGCGGCTCGGGGATCAAAGGCCTTTCTGCTACTGGAGGCTCTaGTTCTTCAGAGCCTGGGTGCCCTGGGGCTTGAGTAACACACGA | + |
|
Preference number: 5 (lower is better) Translates to: GLRLGDQRPFCYWRL*FFRAWVPWGLSNTR Trigger: TCGTGTGTTACTCAAGCCCCAGGGCACCCAGGCTCTGAAGAACCAGAGCCTCCAGTAGCAGAAAGGCCTTTGATCCCCGAGCCGCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | AGCCTTGCTCTCTCTTCCCTTGCTGTCGGGTCGTCCCAAATGATCTaGTCGTTCTGGGACGGCTCCGTGTTCACATCAGGCACTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLALSSLAVGSSQMI*SFWDGSVFTSGTAC Trigger: GCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAGAGCAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS TCA 90 bp | GGGCTGCCGTACTGGTGGAAAGGTGGGGTCCTGCCCCCTCTGCTGTaGAATGACAGCACGGAAGGCTCTACTCTGAAAGCGATTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLPYWWKGGVLPPLL*NDSTEGSTLKAIHV Trigger: GACATGAATCGCTTTCAGAGTAGAGCCTTCCGTGCTGTCATTTCACAGCAGAGGGGGCAGGACCCCACCTTTCCACCAGTACGGCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | TGGCAAGCCTTGCTCTCTCTTCCCTTGCTGTCGGGTCGTCCCAAATaGTCTGCTCGTTCTGGGACGGCTCCGTGTTCACATCAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WQALLSLPLLSGRPK*SARSGTAPCSHQAL Trigger: CAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS CCA 90 bp | CCTCGTCGGCCTGCTGAAGCCTCTCAGCAGGAACAAGGGCGCTCTTaGAGAATGAGCCGCTCTTGTCTAAGACAGCTGTCTGGTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRPAEASQQEQGRS*RMSRSCLRQLSGFQ Trigger: CTGGAAACCAGACAGCTGTCTTAGACAAGAGCGGCTCATTCTCCAAGAGCGCCCTTGTTCCTGCTGAGAGGCTTCAGCAGGCCGACGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | GAAGCTCAGAATGCTGTGTGGGGTCGCTGGGCCACTGTAAGTTGCTaGCAAGCCTTGCTCTCTCTTCCCTTGCTGTCGGGTCGTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EAQNAVWGRWATVSC*QALLSLPLLSGRPK Trigger: TTTGGGACGACCCGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | TCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTGGTGCTCAGTaGCGTCAGGGAGAGCATCAAGTATGGAGCTACTTCCCCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSISLPPVRASAGAQ*RQGEHQVWSYFPTR Trigger: ACGAGTGGGGAAGTAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | CAGTGCGAGCTTCTGCTGGTGCTCAGTGACGTCAGGGAGAGCATCAAGTATGGAAATCTTGTCTGCAGGTaGTGGGGCCACAGGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QCELLLVLSDVRESIKYGNLVCR*WGHRRL Trigger: AAGCCGCCTGTGGCCCCACAACCTGCAGACAAGATT...TCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
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| CDS TCA 90 bp | GCCGTACTGGTGGAAAGGTGGGGTCCTGCCCCCTCTGCTGTGAAATaGCAGCACGGAAGGCTCTACTCTGAAAGCGATTCATGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVLVERWGPAPSAVK*QHGRLYSESDSCPK Trigger: CTTTGGACATGAATCGCTTTCAGAGTAGAGCCTTCCGTGCTGTCATTTCACAGCAGAGGGGGCAGGACCCCACCTTTCCACCAGTACGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | GCACAGAGCGAGCGCTGTCAGGAGTTGAAGAGGCGCTGTTACAGCTaGTTCTTGACATGCAAGTCTTCTGGGCAGGCGTCTTCACAATGC | + |
|
Preference number: 5 (lower is better) Translates to: AQSERCQELKRRCYS*FLTCKSSGQASSQC Trigger: GCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTCGCTCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | CAGATGATCTGGCCCATCATCCTTAGATGCAGAAACTGCCAAGGGTaGCCGGCTGTTACAGAGCCGCCCATCTTGCACTGTGTTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMIWPIILRCRNCQG*PAVTEPPILHCVDV Trigger: GACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | GCAGGCGTCTTCACAATGCAGGTGGCTGACATGATCTCTTGCAGCTaGTTCTGGAAGTTCTCTCTCATCTCCAAGGCCTGGGTCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGVFTMQVADMISCS*FWKFSLISKAWVRA Trigger: AGCTCTGACCCAGGCCTTGGAGATGAGAGAGAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTGAAGACGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | CGCTGTCAGGAGTTGAAGAGGCGCTGTTACAGCTGCTTCTTGACATaGAAGTCTTCTGGGCAGGCGTCTTCACAATGCAGGTGGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RCQELKRRCYSCFLT*KSSGQASSQCRWLT Trigger: TGTCAGCCACCTGCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS GCA 90 bp | TTCCCCACTCGTAGTCTTCTTCCTGCACAAAGCGCCCAGCTGTCTTaGAAGCGTCTAGGTAGGAGCGATGAAGCACCCATTTACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPTRSLLPAQSAQLS*KRLGRSDEAPIYQL Trigger: CAGCTGGTAAATGGGTGCTTCATCGCTCCTACCTAGACGCTTGCAAGACAGCTGGGCGCTTTGTGCAGGAAGAAGACTACGAGTGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | GTGCCCTGGGGCTTGAGTAACACACGAGGCCTGCTCAGCAATTTCTaGATGGTACACAGGCTTTCGAGAGGGAGAGTCATCCGGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPWGLSNTRGLLSNF*MVHRLSRGRVIRHF Trigger: AAAATGCCGGATGACTCTCCCTCTCGAAAGCCTGTGTACCATTCAGAAATTGCTGAGCAGGCCTCGTGTGTTACTCAAGCCCCAGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 90 bp | TTCTACAGACAGATGATCTGGCCCATCATCCTTAGATGCAGAAACTaGCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATCTTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FYRQMIWPIILRCRN*QGCPAVTEPPILHC Trigger: ACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTGTCTGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 90 bp | ATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTGGTaGTCAGTGACGTCAGGGAGAGCATCAAGTATGGAGCTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILFLHLIAASASFCW*SVTSGRASSMELLP Trigger: GGGAAGTAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 90 bp | TGCTGGATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTaGTGGTGCTCAGTGACGTCAGGGAGAGCATCAAGTATGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CWILFLHLIAASASF*WCSVTSGRASSMEL Trigger: TAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 90 bp | TTTCTGACGATGACTTCAGAGAGTGGTGAGCTTAGTTTCCGCTTCTaGCTGGCAGCATTTGGGGTTTCCAGGGCTGCAAGTGCATCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLTMTSESGELSFRF*LAAFGVSRAASASV Trigger: GACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAACTAAGCTCACCACTCTCTGAAGTCATCGTCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 90 bp | TTTCCGCTTCTGGCTGGCAGCATTTGGGGTTTCCAGGGCTGCAAGTaGATCCGTCACATCAAAGGATGGCTTGAAAAGCTTGTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPLLAGSIWGFQGCK*IRHIKGWLEKLVLG Trigger: TCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 90 bp | CTGTACTCTGCTCCCAGTGATGCTGCGACCCCATTGAGCTCACTCTaGTTCTTACTGAGCTTCTTACTCACACACACCACAACGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYSAPSDAATPLSSL*FLLSFLLTHTTTLS Trigger: TGACAGCGTTGTGGTGTGTGTGAGTAAGAAGCTCAGTAAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCATCACTGGGAGCAGAGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS CCA 90 bp | TGTAACAACTTCTCCCACCGTCACGTCTACCTCACATCCCAGCAGTaGAACCACAGCATAGTCAGCAACAATTCTGCTGGGAAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: CNNFSHRHVYLTSQQ*NHSIVSNNSAGKGH Trigger: GTGTCCCTTCCCAGCAGAATTGTTGCTGACTATGCTGTGGTTCCACTGCTGGGATGTGAGGTAGACGTGACGGTGGGAGAAGTTGTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | TCCGAGTCTCTTCCTCCTCCAAATGGGCACCCTTCAGCTGAGGGCTaGCAGAATGACTGTCAGTGTTTCGGGAACTATTTGCCAAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SESLPPPNGHPSAEG*QNDCQCFGNYLPKQ Trigger: TTGCTTTGGCAAATAGTTCCCGAAACACTGACAGTCATTCTGCCAGCCCTCAGCTGAAGGGTGCCCATTTGGAGGAGGAAGAGACTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 90 bp | GTTGAAGAGGCGCTGTTACAGCTGCTTCTTGACATGCAAGTCTTCTaGGCAGGCGTCTTCACAATGCAGGTGGCTGACATGATCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VEEALLQLLLDMQVF*AGVFTMQVADMISC Trigger: GCAAGAGATCATGTCAGCCACCTGCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS CCA 90 bp | GCATTTTTATCTCAACCTGAAGCTCAGAATGCTGTGTGGGGTCGCTaGGCCACTGTAAGTTGCTGGCAAGCCTTGCTCTCTCTTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFLSQPEAQNAVWGR*ATVSCWQALLSLPL Trigger: CAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGATAAAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | AGTCATCCGGCATTTTTATCTCAACCTGAAGCTCAGAATGCTGTGTaGGGTCGCTGGGCCACTGTAAGTTGCTGGCAAGCCTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHPAFLSQPEAQNAV*GRWATVSCWQALLS Trigger: AGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGATAAAAATGCCGGATGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 90 bp | TGGATTCTTTTCCTCCATCTCATTGCCGCCAGTGCGAGCTTCTGCTaGTGCTCAGTGACGTCAGGGAGAGCATCAAGTATGGAGCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: WILFLHLIAASASFC*CSVTSGRASSMELL Trigger: AAGTAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | CTTCTTACTGAGCTTCTTACTCACACACACCACAACGCTGTCAAGTaGTTTCCGAGTCTCTTCCTCCTCCAAATGGGCACCCTTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTELLTHTHHNAVK*FPSLFLLQMGTLQL Trigger: CAGCTGAAGGGTGCCCATTTGGAGGAGGAAGAGACTCGGAAACCACTTGACAGCGTTGTGGTGTGTGTGAGTAAGAAGCTCAGTAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 90 bp | GTCTTCACAATGCAGGTGGCTGACATGATCTCTTGCAGCTGCTTCTaGAAGTTCTCTCTCATCTCCAAGGCCTGGGTCAGAGCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFTMQVADMISCSCF*KFSLISKAWVRAPL Trigger: TAAAGGAGCTCTGACCCAGGCCTTGGAGATGAGAGAGAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCGAGCGCTGTCAGGAGTaGAAGAGGCGCTGTTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGERCQE*KRRCYS Trigger: GCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTC...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | GCCAGTGCGAGCTTCTGCTGGTGCTCAGTGACGTCAGGGAGAGCATCAAGTATGGTAATCAATCCGCTCTaGAGAATTCAGAGACGACAT | + |
|
Preference number: 5 (lower is better) Translates to: ASASFCWCSVTSGRASSMVINPL*RIQRRH Trigger: ATGTCGTCTCTGAATTCTCAAGAGCGGATTGATTAC...CATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185305.2 |
||
| CDS TCA 90 bp | GGGTTTCCAGGGCTGCAAGTGCATCCGTCACATCAAAGGATGGCTTaGAAAGCTTGTCCTTGGACAGAAACTTTGATGGTGTGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GFPGLQVHPSHQRMA*KACPWTETLMVCPG Trigger: ACCTGGACACACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 90 bp | CCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATCTTGCACTGTGTTaGTGTCCAAACTCATTTTGGGATTGTAAGTGTGTGGATAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRVPGCYRAAHLALC*CPNSFWDCKCVDKE Trigger: CTCTTTATCCACACACTTACAATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | CAGCTGAGGGCTGGCAGAATGACTGTCAGTGTTTCGGGAACTATTTaGCAAAGCAACTGTCAGGTTTCTGACGATGACTTCAGAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLRAGRMTVSVSGTI*QSNCQVSDDDFREW Trigger: CCACTCTCTGAAGTCATCGTCAGAAACCTGACAGTTGCTTTGGCAAATAGTTCCCGAAACACTGACAGTCATTCTGCCAGCCCTCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGAATCTTGTCTGCAGGTaGTGGGGCCACAGGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWNLVCR*WGHRRL Trigger: AAGCCGCCTGTGGCCCCACAACCTGCAGACAAGATT...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | ATCTGCGAGCGTGTGACTTTCAGCATTGCTCTGAGCAGTGGGTGTTaGAGTATCAGGCACCATCTTTGCTTCTACTCTGGTTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ICERVTFSIALSSGC*SIRHHLCFYSGFSL Trigger: AAGGCTGAAACCAGAGTAGAAGCAAAGATGGTGCCTGATACTTCAACACCCACTGCTCAGAGCAATGCTGAAAGTCACACGCTCGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | ATCTTCAACTGTCCCATGTACTGGCCTCCGTGCTTAGCCGTGAGTTaGTGGACTGTCTTTCTGTGTATTCCATTTAAGCCAGTCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: IFNCPMYWPPCLAVS*WTVFLCIPFKPVTQ Trigger: CTGTGTGACTGGCTTAAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CCA 90 bp | ACAATGAGGTGTGTACACTCATTCATCTTCAACTGTCCCATGTACTaGCCTCCGTGCTTAGCCGTGAGTTGCTGGACTGTCTTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TMRCVHSFIFNCPMY*PPCLAVSCWTVFLC Trigger: ACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAAGATGAATGAGTGTACACACCTCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCGATGCTGCGACCCCATaGAGCTCACTCTGCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGDAATP*SSLCFL Trigger: TAAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCATC...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGAGTTGCTGGCAAGCCTaGCTCTCTCTTCCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSFIVKLSAQAVKEVKWSCWQA*LSLPLL Trigger: CAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACT...CCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | CACAGTCCTCTAAAGGAGTCACTCCCGACATTACTGAGACTGGTGTaGAGAGGGGATTCGACTTGGGATCAACTAATGTCTGGTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HSPLKESLPTLLRLV*RGDSTWDQLMSGCL Trigger: TAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTTCACACCAGTCTCAGTAATGTCGGGAGTGACTCCTTTAGAGGACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 90 bp | TTCAACTGTCCCATGTACTGGCCTCCGTGCTTAGCCGTGAGTTGCTaGACTGTCTTTCTGTGTATTCCATTTAAGCCAGTCACACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: FNCPMYWPPCLAVSC*TVFLCIPFKPVTQI Trigger: TATCTGTGTGACTGGCTTAAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | TGTGTACACTCATTCATCTTCAACTGTCCCATGTACTGGCCTCCGTaGTTAGCCGTGAGTTGCTGGACTGTCTTTCTGTGTATTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CVHSFIFNCPMYWPP*LAVSCWTVFLCIPF Trigger: AAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAAGATGAATGAGTGTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTACTGGATGCTCAGCTCTaGGGACACATTGCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YFKFRAPASLLNSLLRLLLDAQL*GHIAGG Trigger: GCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCAG...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAGGAACAAGGGCGCTCTaGGAGAATGAGCCGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFKFRAPASLLNSLLRLLGTRAL*ENEPLL Trigger: CAAGAGCGGCTCATTCTCCAAGAGCGCCCTTGTTCC...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCACAAAATGTGACCACTaGAGGACCAACAATCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGTKCDH*RTNNPA Trigger: TGCAGGATTGTTGGTCCTCAAGTGGTCACATTTTGT...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | GCAGCAACTAAGTACTTTTTGCTCCCAACTTCTCCTGCAATAAGGTaGGTGACTGATACATTAAGGTCTCTGTATACTCGTCCACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AATKYFLLPTSPAIR*VTDTLRSLYTRPPI Trigger: GATGGGTGGACGAGTATACAGAGACCTTAATGTATCAGTCACTCACCTTATTGCAGGAGAAGTTGGGAGCAAAAAGTACTTAGTTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | ACATTGTTTCATTTACACAGCTGCCATTTATGTTGGATATATGGCTaGCATCTGCGAGCGTGTGACTTTCAGCATTGCTCTGAGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLFHLHSCHLCWIYG*HLRACDFQHCSEQW Trigger: CCACTGCTCAGAGCAATGCTGAAAGTCACACGCTCGCAGATGTCAGCCATATATCCAACATAAATGGCAGCTGTGTAAATGAAACAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS TCA 90 bp | TTGCTAAGAATACCAAGGAATCTCTTTCTGCTCCCACACACTGACTaGAGGAAATCACACAGTCCTCTAAAGGAGTCACTCCCGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: LLRIPRNLFLLPHTD*RKSHSPLKESLPTL Trigger: TAATGTCGGGAGTGACTCCTTTAGAGGACTGTGTGATTTCCTTCAGTCAGTGTGTGGGAGCAGAAAGAGATTCCTTGGTATTCTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCTTGTCCTTTTGGTTCTaGCACAATGAGGTGTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGLSFWF*HNEVCT Trigger: TGTACACACCTCATTGTGCAAGAACCAAAAGGACAA...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACAACTCCAGCAACCACTTaGCTCCCACTACGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKFWCPSLANDRSLYIHTTPATT*LPLREA Trigger: GGCCTCACGTAGTGGGAGCAAAGTGGTTGCTGGAGT...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCGCAAACTCCATTTCTTaGCAGCTTCGTATTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGANSIS*QLRIWN Trigger: GTTCCAAATACGAAGCTGCAAAGAAATGGAGTTTGC...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCTGGGCCACTGTAAGTaGCTGGCAAGCCTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKFWCPSLANDRSLYIHLGHCK*LASLAL Trigger: GAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTTTTCCTCCATCTCATaGCCGCCAGTGCGAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FRCMPLNCYTNASQQCSGFSSIS*PPVRAS Trigger: AGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAA...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAACAATGCCGGATTCTaGACTTTGCTGGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: APASLLNSLLRLLKRLNGNNAGF*TLLDSF Trigger: AAAAGAATCCAGCAAAGTCAAGAATCCGGCATTGTT...GCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | GATATATTCTGTTTTCAAGCAGACCATGTTCTGGGCAGTAGCCTCTaGGATGAAAACTCTGCAGTCATCAGGTTTCAGTTTATTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DIFCFQADHVLGSSL*DENSAVIRFQFIEV Trigger: GACTTCAATAAACTGAAACCTGATGACTGCAGAGTTTTCATCGCAGAGGCTACTGCCCAGAACATGGTCTGCTTGAAAACAGAATATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS-3UTR CAA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTCGAGCATGCCTTTCTTaGCATTGGCTTTGCGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RCMPLNCYTNASQQCSGCRACLS*HWLCEQ Trigger: TTGTTCGCAAAGCCAATGCAAAGAAAGGCATGCTCG...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS GCA 90 bp | CACCCCTCTTTCCTTTGCAGATTTATATTCTCGATTACTGTCATTTaGCCGACCCTGGTAAATGAAATGAGTAACAGTCTCATCGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: HPSFLCRFIFSITVI*PTLVNEMSNSLIET Trigger: AGTTTCGATGAGACTGTTACTCATTTCATTTACCAGGGTCGGGCAAATGACAGTAATCGAGAATATAAATCTGCAAAGGAAAGAGGGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACAAGCTCTTGGGACACATaGCTGGTGGCGCATACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKFWCPSLANDRSLYIHTSSWDT*LVAHTK Trigger: TTTTGTATGCGCCACCAGCAATGTGTCCCAAGAGCT...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTACATCAAAGGATGGCTaGAAAAGCTTGTCCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRCMPLNCYTNASQQCSGTSKDG*KSLSLD Trigger: GTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGT...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTAACAGAGGTGACTCTTaGTCATTTGTGCCCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCMPLNCYTNASQQCSGCNRGDS*SFVPIV Trigger: CACTATGGGCACAAATGACAAAGAGTCACCTCTGTT...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATGACCAGATAACACCTTaGCTCCTCCTGCCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYDQITP*LLLPEE Trigger: TTCTTCAGGCAGGAGGAGCAAAGGTGTTATCTGGTC...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 90 bp | TTAAGGTCTCTGTATACTCGTCCACCCATCATTTGTACGTATTTATaGACTTCTTCCCGTTTGTCTTTATCCAGGCTTGTACAGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: LRSLYTRPPIICTYL*TSSRLSLSRLVQDT Trigger: TGTATCCTGTACAAGCCTGGATAAAGACAAACGGGAAGAAGTTCATAAATACGTACAAATGATGGGTGGACGAGTATACAGAGACCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGGCACATTCGTATTTTaGTCCTTTTGGTTCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FRCMPLNCYTNASQQCSGGTFVF*SFWFLH Trigger: GTGCAAGAACCAAAAGGACAAAAATACGAATGTGCC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTGATGGCTTGAAAAGCTaGTCCTTGGACAGAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCMPLNCYTNASQQCSGCDGLKS*SLDRNF Trigger: AAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATC...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTGTAATCAATCCGCTCTaGAGAATTCAGAGACGACAT | + |
|
Preference number: 5 (lower is better) Translates to: FRCMPLNCYTNASQQCSGVINPL*RIQRRH Trigger: ATGTCGTCTCTGAATTCTCAAGAGCGGATTGATTAC...ACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 90 bp | ATATCCGACAGCCATCTAATAAGTCTTCAGGAGCTTGAAACATACTaGTGTCCAGATTTTCTAGGTTTTCAAGGGAACATTCAAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISDSHLISLQELETY*CPDFLGFQGNIQVC Trigger: GCAAACTTGAATGTTCCCTTGAAAACCTAGAAAATCTGGACATCAGTATGTTTCAAGCTCCTGAAGACTTATTAGATGGCTGTCGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 90 bp | CCACAAAGATATATCCGACAGCCATCTAATAAGTCTTCAGGAGCTTaGAACATACTGATGTCCAGATTTTCTAGGTTTTCAAGGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PQRYIRQPSNKSSGA*NILMSRFSRFSREH Trigger: ATGTTCCCTTGAAAACCTAGAAAATCTGGACATCAGTATGTTTCAAGCTCCTGAAGACTTATTAGATGGCTGTCGGATATATCTTTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTTCGTCCACCCATCATTaGTACGTATTTATGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCMPLNCYTNASQQCSGCSSTHH*YVFMNF Trigger: GAAGTTCATAAATACGTACAAATGATGGGTGGACGA...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACGCAACTAAGTACTTTTaGCTCCCAACTTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISKFWCPSLANDRSLYIHATKYF*LPTSPA Trigger: TGCAGGAGAAGTTGGGAGCAAAAAGTACTTAGTTGC...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | AGATGTATGCCTTTAAACTGCTACACAAATGCATCACAGCAATGTTCAGGTTGTTCTTGTTTAGGTGCGTaGTCAACCAGAAAATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCMPLNCYTNASQQCSGCSCLGA*STRKWF Trigger: AAACCATTTTCTGGTTGACAACGCACCTAAACAAGA...ACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | TATTTTAAGTTTAGAGCCCCAGCTTCATTGTTAAACTCTCTGCTCAGGCTGTTATTGAAAAGCTTGTCCTaGGACAGAAACTTTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: YFKFRAPASLLNSLLRLLLKSLS*DRNFDG Trigger: ACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAA...TAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTAAACTTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACCAGCTGCCATTTATGTaGGATATATGGCTGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: ISKFWCPSLANDRSLYIHQLPFM*DIWLTS Trigger: AGATGTCAGCCATATATCCAACATAAATGGCAGCTG...GTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATGCACCCCTCTTTCCTTaGCAGATTTATATTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYAPLFP*QIYILD Trigger: ATCGAGAATATAAATCTGCAAAGGAAAGAGGGGTGC...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | GTTAAACTCTCTGCTCAGGCTGTTAAAGAGGTTAAATGGCAAGAATACATATATAGGGAACATTCAAGTTaGCTAGTAGTTGAACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKLSAQAVKEVKWQEYIYREHSS*LVVEPN Trigger: GTTTGGTTCAACTACTAGCAAACTTGAATGTTCCCT...ATATATGTATTCTTGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTTTTGGTGCCCAAGTTTGGCAAATGATAGAAGTTTATACATACACACACTGGTAAATCTGGATTaGAACTCACTCCATTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SKFWCPSLANDRSLYIHTLVNLD*NSLHLV Trigger: TACCAAATGGAGTGAGTTCAAATCCAGATTTACCAG...TGTGTGTATGTATAAACTTCTATCATTTGCCAAACTTGGGCACCAAAACTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CTCGTTCTGGGACGGCTCCGTGTTCACATCAGGCACTaGCTGCCGAGACTGCCTGAGTGCCTCCAGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LVLGRLRVHIRH*LPRLPECLQDS Trigger: CGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | TTCTGGGACGGCTCCGTGTTCACATCAGGCACTGCCTaGCGAGACTGCCTGAGTGCCTCCAGGACTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FWDGSVFTSGTA*RDCLSASRTRL Trigger: AAGCCGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 72 bp | CTTGCTGTCGGGTCGTCCCAAATGATCTGCTCGTTCTaGGACGGCTCCGTGTTCACATCAGGCACTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAVGSSQMICSF*DGSVFTSGTAC Trigger: GCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 72 bp | CCTTTCTGCTACTGGAGGCTCTGGTTCTTCAGAGCCTaGGTGCCCTGGGGCTTGAGTAACACACGAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PFCYWRLWFFRA*VPWGLSNTRGL Trigger: CAGGCCTCGTGTGTTACTCAAGCCCCAGGGCACCCAGGCTCTGAAGAACCAGAGCCTCCAGTAGCAGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | GGACTCGGCTTCGTCCGCTCCGCACAGAGCGAGCGCTGTCAGGAGTaGAAGAGGCGCTGTTACAGCTGCTTCTTGACATGCAAGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLGFVRSAQSERCQE*KRRCYSCFLTCKSS Trigger: AGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTCGCTCTGTGCGGAGCGGACGAAGCCGAGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | CTCTCTTCCCTTGCTGTCGGGTCGTCCCAAATGATCTaGTCGTTCTGGGACGGCTCCGTGTTCACATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLAVGSSQMI*SFWDGSVFTSG Trigger: GCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | CAGAATGCTGTGTGGGGTCGCTGGGCCACTGTAAGTTaGTGGCAAGCCTTGCTCTCTCTTCCCTTGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QNAVWGRWATVS*WQALLSLPLLS Trigger: CGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TCTCATTGCGCAGTGGGTAGCCCACAACCATGTGTGTaGAGCTGGGGTCAGAGCACTGCTTCTCGATCACCG | + |
|
Preference number: 6 (lower is better) Translates to: SHCAVGSPQPCV*SWGQSTASRSP Trigger: CGGTGATCGAGAAGCAGTGCTCTGACCCCAGCTGCACACACATGGTTGTGGGCTACCCACTGCGCAATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | AATGCTGTGTGGGGTCGCTGGGCCACTGTAAGTTGCTaGCAAGCCTTGCTCTCTCTTCCCTTGCTGTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NAVWGRWATVSC*QALLSLPLLSG Trigger: ACCCGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | TACTGGAGGCTCTGGTTCTTCAGAGCCTGGGTGCCCTaGGGCTTGAGTAACACACGAGGCCTGCTCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: YWRLWFFRAWVP*GLSNTRGLLSN Trigger: ATTGCTGAGCAGGCCTCGTGTGTTACTCAAGCCCCAGGGCACCCAGGCTCTGAAGAACCAGAGCCTCCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TTCGTCCGCTCCGCACAGAGCGAGCGCTGTCAGGAGTaGAAGAGGCGCTGTTACAGCTGCTTCTTGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: FVRSAQSERCQE*KRRCYSCFLTC Trigger: GCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTCGCTCTGTGCGGAGCGGACGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | TGGCCCATCATCCTTAGATGCAGAAACTGCCAAGGGTaGCCGGCTGTTACAGAGCCGCCCATCTTGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: WPIILRCRNCQG*PAVTEPPILHC Trigger: ACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CAGATGATCTGGCCCATCATCCTTAGATGCAGAAACTaGCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: QMIWPIILRCRN*QGCPAVTEPPI Trigger: GATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TTTTCTGTGCGTCTCCTCCTGTGTTTCAATCTTGTCTaGAGGTTGTGGGGCCACAGGCGGCTTAGCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSVRLLLCFNLV*RLWGHRRLSQG Trigger: CCCCTGGCTAAGCCGCCTGTGGCCCCACAACCTGCAGACAAGATTGAAACACAGGAGGAGACGCACAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185305.2 |
||
| CDS CAA 90 bp | AGCGAGCGCTGTCAGGAGTTGAAGAGGCGCTGTTACAGCTGCTTCTaGACATGCAAGTCTTCTGGGCAGGCGTCTTCACAATGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SERCQELKRRCYSCF*TCKSSGQASSQCRW Trigger: CCACCTGCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | TTGCTCTCTCTTCCCTTGCTGTCGGGTCGTCCCAAATaGTCTGCTCGTTCTGGGACGGCTCCGTGTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LLSLPLLSGRPK*SARSGTAPCSH Trigger: ATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | CGAGAGGGAGAGTCATCCGGCATTTTTATCTCAACCTaGAGCTCAGAATGCTGTGTGGGGTCGCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: REGESSGIFIST*SSECCVGSLGH Trigger: GTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGATAAAAATGCCGGATGACTCTCCCTCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | TCATTGCCGCCAGTGCGAGCTTCTGCTGGTGCTCAGTaGCGTCAGGGAGAGCATCAAGTATGGAGCTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLPPVRASAGAQ*RQGEHQVWSYF Trigger: GAAGTAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CCGCTTCTGGCTGGCAGCATTTGGGGTTTCCAGGGCTaGAAGTGCATCCGTCACATCAAAGGATGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLLAGSIWGFQG*KCIRHIKGWLE Trigger: TTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | CCTGCTGAAGCCTCTCAGCAGGAACAAGGGCGCTCTTaGAGAATGAGCCGCTCTTGTCTAAGACAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAEASQQEQGRS*RMSRSCLRQLS Trigger: AGACAGCTGTCTTAGACAAGAGCGGCTCATTCTCCAAGAGCGCCCTTGTTCCTGCTGAGAGGCTTCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | TCTCAACCTGAAGCTCAGAATGCTGTGTGGGGTCGCTaGGCCACTGTAAGTTGCTGGCAAGCCTTGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPEAQNAVWGR*ATVSCWQALLS Trigger: AGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | GCCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATCTTaGACTGTGTTGATGTCCAAACTCATTTTGGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: AKGARLLQSRPS*TVLMSKLILGL Trigger: CAATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CCCACAACCATGTGTGTGCAGCTGGGGTCAGAGCACTaGTTCTCGATCACCGACCCACCTAAGTCTTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: PTTMCVQLGSEH*FSITDPPKSLI Trigger: GATTAAAGACTTAGGTGGGTCGGTGATCGAGAAGCAGTGCTCTGACCCCAGCTGCACACACATGGTTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CGTAGTCTTCTTCCTGCACAAAGCGCCCAGCTGTCTTaGAAGCGTCTAGGTAGGAGCGATGAAGCACCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RSLLPAQSAQLS*KRLGRSDEAPI Trigger: AATGGGTGCTTCATCGCTCCTACCTAGACGCTTGCAAGACAGCTGGGCGCTTTGTGCAGGAAGAAGACTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | TTCTCCCACCGTCACGTCTACCTCACATCCCAGCAGTaGAACCACAGCATAGTCAGCAACAATTCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSHRHVYLTSQQ*NHSIVSNNSAG Trigger: CCCAGCAGAATTGTTGCTGACTATGCTGTGGTTCCACTGCTGGGATGTGAGGTAGACGTGACGGTGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | CTTCAGAGAGTGGTGAGCTTAGTTTCCGCTTCTGGCTGGCAGCATTaGGGGTTTCCAGGGCTGCAAGTGCATCCGTCACATCAAAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQRVVSLVSASGWQH*GFPGLQVHPSHQRM Trigger: CATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAACTAAGCTCACCACTCTCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | AGTCTCATCGAAACTCCACCTGTACTCTGCTCCCAGTaGTGCTGCGACCCCATTGAGCTCACTCTGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLIETPPVLCSQ*CCDPIELTLLL Trigger: AAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCATCACTGGGAGCAGAGTACAGGTGGAGTTTCGATGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | TCTGGGCAGGCGTCTTCACAATGCAGGTGGCTGACATaGTCTCTTGCAGCTGCTTCTGGAAGTTCTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGQASSQCRWLT*SLAAASGSSLS Trigger: TGAGAGAGAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTGAAGACGCCTGCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | AGTCTTCTGGGCAGGCGTCTTCACAATGCAGGTGGCTaGCATGATCTCTTGCAGCTGCTTCTGGAAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLGRRLHNAGG*HDLLQLLLEVL Trigger: GAGAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTGAAGACGCCTGCCCAGAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | CCAGCAGTGGAACCACAGCATAGTCAGCAACAATTCTaGTGGGAAGGGACACAATCTTGCCAGCATGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAVEPQHSQQQF*WEGTQSCQHAL Trigger: GAGAGCATGCTGGCAAGATTGTGTCCCTTCCCAGCAGAATTGTTGCTGACTATGCTGTGGTTCCACTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CTGGCTGGCAGCATTTGGGGTTTCCAGGGCTGCAAGTaGATCCGTCACATCAAAGGATGGCTTGAAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAGSIWGFQGCK*IRHIKGWLEKL Trigger: AAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | GAGTTGAAGAGGCGCTGTTACAGCTGCTTCTTGACATaGAAGTCTTCTGGGCAGGCGTCTTCACAATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ELKRRCYSCFLT*KSSGQASSQCR Trigger: CCTGCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 72 bp | ATGACTTCAGAGAGTGGTGAGCTTAGTTTCCGCTTCTaGCTGGCAGCATTTGGGGTTTCCAGGGCTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: MTSESGELSFRF*LAAFGVSRAAS Trigger: ACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAACTAAGCTCACCACTCTCTGAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | CTTCCTCCTCCAAATGGGCACCCTTCAGCTGAGGGCTaGCAGAATGACTGTCAGTGTTTCGGGAACTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPPNGHPSAEG*QNDCQCFGNYL Trigger: CAAATAGTTCCCGAAACACTGACAGTCATTCTGCCAGCCCTCAGCTGAAGGGTGCCCATTTGGAGGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CCA 72 bp | GCATTTTTATCTCAACCTGAAGCTCAGAATGCTGTGTaGGGTCGCTGGGCCACTGTAAGTTGCTGGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AFLSQPEAQNAV*GRWATVSCWQA Trigger: GGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGATAAAAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TGCCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATCTaGCACTGTGTTGATGTCCAAACTCATTTTGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: CQGCPAVTEPPI*HCVDVQTHFGI Trigger: AATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TTAACTTTTCTGTGCGTCTCCTCCTGTGTTTCAATCTaGTCTGCAGGTTGTGGGGCCACAGGCGGCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTFLCVSSCVSI*SAGCGATGGLA Trigger: GGCTAAGCCGCCTGTGGCCCCACAACCTGCAGACAAGATTGAAACACAGGAGGAGACGCACAGAAAAGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185305.2 |
||
| CDS CAA 90 bp | TCGAAACTCCACCTGTACTCTGCTCCCAGTGATGCTGCGACCCCATaGAGCTCACTCTGCTTCTTACTGAGCTTCTTACTCACACACACC | + |
|
Preference number: 6 (lower is better) Translates to: SKLHLYSAPSDAATP*SSLCFLLSFLLTHT Trigger: GGTGTGTGTGAGTAAGAAGCTCAGTAAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCATCACTGGGAGCAGAGTACAGGTGGAGTTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CAA 90 bp | TGCAGAAACTGCCAAGGGTGCCCGGCTGTTACAGAGCCGCCCATCTaGCACTGTGTTGATGTCCAAACTCATTTTGGGATTGTAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRNCQGCPAVTEPPI*HCVDVQTHFGIVSV Trigger: CACACTTACAATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | GGCTTGAGTAACACACGAGGCCTGCTCAGCAATTTCTaGATGGTACACAGGCTTTCGAGAGGGAGAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GLSNTRGLLSNF*MVHRLSRGRVI Trigger: GATGACTCTCCCTCTCGAAAGCCTGTGTACCATTCAGAAATTGCTGAGCAGGCCTCGTGTGTTACTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | ATAACACCTTTGCTCCTCCTGCCTGAAGAAGGCGTTTaGACCCAGCTTCTCGGGGCCGATCAACACGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ITPLLLLPEEGV*TQLLGADQHVK Trigger: TTTTACGTGTTGATCGGCCCCGAGAAGCTGGGTTCAAACGCCTTCTTCAGGCAGGAGGAGCAAAGGTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TTCTACAGACAGATGATCTGGCCCATCATCCTTAGATaGAGAAACTGCCAAGGGTGCCCGGCTGTTACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FYRQMIWPIILR*RNCQGCPAVTE Trigger: CTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTGTCTGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | CCCATGTACTGGCCTCCGTGCTTAGCCGTGAGTTGCTaGACTGTCTTTCTGTGTATTCCATTTAAGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PMYWPPCLAVSC*TVFLCIPFKPV Trigger: GACTGGCTTAAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TGTCAGGAGTTGAAGAGGCGCTGTTACAGCTGCTTCTaGACATGCAAGTCTTCTGGGCAGGCGTCTTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: CQELKRRCYSCF*TCKSSGQASSQ Trigger: TTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | CCCGGCTGTTACAGAGCCGCCCATCTTGCACTGTGTTaGTGTCCAAACTCATTTTGGGATTGTAAGTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGCYRAAHLALC*CPNSFWDCKCV Trigger: CACACACTTACAATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TGTCCCATGTACTGGCCTCCGTGCTTAGCCGTGAGTTaGTGGACTGTCTTTCTGTGTATTCCATTTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CPMYWPPCLAVS*WTVFLCIPFKP Trigger: TGGCTTAAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TCATTCATCTTCAACTGTCCCATGTACTGGCCTCCGTaGTTAGCCGTGAGTTGCTGGACTGTCTTTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFIFNCPMYWPP*LAVSCWTVFLC Trigger: ACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAAGATGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | ACTTTGCTCCCACTACGTGAGGCCTGTGAGATGATTTaGTCCAGAACTGCCTCACGTCGTCATCATAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLLPLREACEMI*SRTASRRHHNL Trigger: GAGATTATGATGACGACGTGAGGCAGTTCTGGAGCAAATCATCTCACAGGCCTCACGTAGTGGGAGCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | CTGCGAGCGTGTGACTTTCAGCATTGCTCTGAGCAGTaGGTGTTGAAGTATCAGGCACCATCTTTGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LRACDFQHCSEQ*VLKYQAPSLLL Trigger: TAGAAGCAAAGATGGTGCCTGATACTTCAACACCCACTGCTCAGAGCAATGCTGAAAGTCACACGCTCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | GCAGTGGAACCACAGCATAGTCAGCAACAATTCTGCTaGGAAGGGACACAATCTTGCCAGCATGCTCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: AVEPQHSQQQFC*EGTQSCQHALL Trigger: TAAGAGAGCATGCTGGCAAGATTGTGTCCCTTCCCAGCAGAATTGTTGCTGACTATGCTGTGGTTCCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | CATGTTGTAGACTGGATGCTCAGCTCTTGGGACACATaGCTGGTGGCGCATACAAAATGTGACCACTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVVDWMLSSWDT*LVAHTKCDHLR Trigger: CCTCAAGTGGTCACATTTTGTATGCGCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCAGTCTACAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
||
| CDS CAA 90 bp | GTCACTCCCGACATTACTGAGACTGGTGTGAAGAGGGGATTCGACTaGGGATCAACTAATGTCTGGTTGTCTATACACGTAACCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTPDITETGVKRGFD*GSTNVWLSIHVTSH Trigger: GTGGCTGGTTACGTGTATAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTTCACACCAGTCTCAGTAATGTCGGGAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | ACACATTGCTGGTGGCGCATACAAAATGTGACCACTTaGGGACCAACAATCCTGCAGCCAAGCTGTTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: THCWWRIQNVTT*GPTILQPSCLR Trigger: CCTTAAACAGCTTGGCTGCAGGATTGTTGGTCCTCAAGTGGTCACATTTTGTATGCGCCACCAGCAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
||
| CDS TCA 72 bp | CGTGTGACTTTCAGCATTGCTCTGAGCAGTGGGTGTTaGAGTATCAGGCACCATCTTTGCTTCTACTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RVTFSIALSSGC*SIRHHLCFYSG Trigger: ACCAGAGTAGAAGCAAAGATGGTGCCTGATACTTCAACACCCACTGCTCAGAGCAATGCTGAAAGTCACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | CTCTGCTGTGAAATGACAGCACGGAAGGCTCTACTCTaGAAGCGATTCATGTCCAAAGGTGTAACCGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCCEMTARKALL*KRFMSKGVTAF Trigger: AAAGGCGGTTACACCTTTGGACATGAATCGCTTTCAGAGTAGAGCCTTCCGTGCTGTCATTTCACAGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | GGGCTGCAAGTGCATCCGTCACATCAAAGGATGGCTTaGAAAGCTTGTCCTTGGACAGAAACTTTGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLQVHPSHQRMA*KACPWTETLMV Trigger: CACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | GGATACAGTTACGTCAGACATTATCATGTTGTAGACTaGATGCTCAGCTCTTGGGACACATTGCTGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GYSYVRHYHVVD*MLSSWDTLLVA Trigger: CGCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCAGTCTACAACATGATAATGTCTGACGTAACTGTATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
||
| CDS CAA 72 bp | GACACATTGCTGGTGGCGCATACAAAATGTGACCACTaGAGGACCAACAATCCTGCAGCCAAGCTGTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLLVAHTKCDH*RTNNPAAKLFK Trigger: CTTAAACAGCTTGGCTGCAGGATTGTTGGTCCTCAAGTGGTCACATTTTGTATGCGCCACCAGCAATGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
||
| CDS CAA 90 bp | AGAGTCATCAAGGATGCAATGACTGACAGACGACTTGTTTTCCTCTaGCACAGAAATGTGAGTGGAATCATCACAGGGCTCACGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVIKDAMTDRRLVFL*HRNVSGIITGLTVS Trigger: GCTCACCGTGAGCCCTGTGATGATTCCACTCACATTTCTGTGCAAGAGGAAAACAAGTCGTCTGTCAGTCATTGCATCCTTGATGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | AGGGCTGCAAGTGCATCCGTCACATCAAAGGATGGCTTGAAAAGCTaGTCCTTGGACAGAAACTTTGATGGTGTGTCCAGGTGTAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAASASVTSKDGLKS*SLDRNFDGVSRCKE Trigger: CTCTTTACACCTGGACACACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | ACAGCTGCCATTTATGTTGGATATATGGCTGACATCTaGGAGCGTGTGACTTTCAGCATTGCTCTGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TAAIYVGYMADI*ERVTFSIALSS Trigger: ACTGCTCAGAGCAATGCTGAAAGTCACACGCTCGCAGATGTCAGCCATATATCCAACATAAATGGCAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | GCTGGCAGAATGACTGTCAGTGTTTCGGGAACTATTTaGCAAAGCAACTGTCAGGTTTCTGACGATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGRMTVSVSGTI*QSNCQVSDDDF Trigger: GAAGTCATCGTCAGAAACCTGACAGTTGCTTTGGCAAATAGTTCCCGAAACACTGACAGTCATTCTGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | CCAATGCTCGGACACGATGTGCACCCCTCTTTCCTTTaGAGATTTATATTCTCGATTACTGTCATTTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PMLGHDVHPSFL*RFIFSITVICP Trigger: CGGGCAAATGACAGTAATCGAGAATATAAATCTGCAAAGGAAAGAGGGGTGCACATCGTGTCCGAGCATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
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| CDS CAA 72 bp | CTGACAAAAGCCTTTCTCAATACTGTCATGAAACCATaGCAGGGTCACACAGTGCACATTCCATCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTKAFLNTVMKP*QGHTVHIPSPG Trigger: GCCAGGAGATGGAATGTGCACTGTGTGACCCTGCAATGGTTTCATGACAGTATTGAGAAAGGCTTTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | AGTGCATCCGTCACATCAAAGGATGGCTTGAAAAGCTaGTCCTTGGACAGAAACTTTGATGGTGTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SASVTSKDGLKS*SLDRNFDGVSR Trigger: CCTGGACACACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | AGACATTATCATGTTGTAGACTGGATGCTCAGCTCTTGGGACACATaGCTGGTGGCGCATACAAAATGTGACCACTTGAGGACCAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: RHYHVVDWMLSSWDT*LVAHTKCDHLRTNN Trigger: ATTGTTGGTCCTCAAGTGGTCACATTTTGTATGCGCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCAGTCTACAACATGATAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
||
| CDS TCA 72 bp | CCCATAGTGTTTGTCTCATTTCCTTCTACAGACAGATaGTCTGGCCCATCATCCTTAGATGCAGAAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PIVFVSFPSTDR*SGPSSLDAETA Trigger: GGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTGTCTGTAGAAGGAAATGAGACAAACACTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | CCCATAGTGTTTGTCTCATTTCCTTCTACAGACAGATaGTCTGGCTCTAATAGCCAATGCTCGGACACGATG | + |
|
Preference number: 6 (lower is better) Translates to: PIVFVSFPSTDR*SGSNSQCSDTM Trigger: CATCGTGTCCGAGCATTGGCTATTAGAGCCAGATCATCTGTCTGTAGAAGGAAATGAGACAAACACTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185721.2 |
||
| CDS GCA 72 bp | TGTTTTCAAGCAGACCATGTTCTGGGCAGTAGCCTCTaGGATGAAAACTCTGCAGTCATCAGGTTTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CFQADHVLGSSL*DENSAVIRFQF Trigger: AAACTGAAACCTGATGACTGCAGAGTTTTCATCGCAGAGGCTACTGCCCAGAACATGGTCTGCTTGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | GTGAAGAGGGGATTCGACTTGGGATCAACTAATGTCTaGTTGTCTATACACGTAACCAGCCACGTGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VKRGFDLGSTNV*LSIHVTSHVFV Trigger: TACAAACACGTGGCTGGTTACGTGTATAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | AGTGTTTGTCTCATTTCCTTCTACAGACAGATGATCTaGCCCATCATCCTTAGATGCAGAAACTGCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVCLISFYRQMI*PIILRCRNCQG Trigger: CCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTGTCTGTAGAAGGAAATGAGACAAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | ACTGCCGGCAAACTCCATTTCTTTGCAGCTTCGTATTaGGAACCAGTCGGTTCCTTCACTATAAGATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAGKLHFFAASY*EPVGSFTIRCV Trigger: CACACATCTTATAGTGAAGGAACCGACTGGTTCCAAATACGAAGCTGCAAAGAAATGGAGTTTGCCGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | TTTGCTCCCAACTTCTCCTGCAATAAGGTGAGTGACTaGTACATTAAGGTCTCTGTATACTCGTCCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FAPNFSCNKVSD*YIKVSVYSSTH Trigger: ATGGGTGGACGAGTATACAGAGACCTTAATGTATCAGTCACTCACCTTATTGCAGGAGAAGTTGGGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | CCTTCTTCACGAACTGTAGAGTCATCAAGGATGCAATaGCTGACAGACGACTTGTTTTCCTCTTGCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSSRTVESSRMQ*LTDDLFSSCTE Trigger: TTCTGTGCAAGAGGAAAACAAGTCGTCTGTCAGTCATTGCATCCTTGATGACTCTACAGTTCGTGAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | AAGAATACCAAGGAATCTCTTTCTGCTCCCACACACTaGCTGAAGGAAATCACACAGTCCTCTAAAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KNTKESLSAPTH*LKEITQSSKGV Trigger: GACTCCTTTAGAGGACTGTGTGATTTCCTTCAGTCAGTGTGTGGGAGCAGAAAGAGATTCCTTGGTATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | AAGAGGGGATTCGACTTGGGATCAACTAATGTCTGGTaGTCTATACACGTAACCAGCCACGTGTTTGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: KRGFDLGSTNVW*SIHVTSHVFVT Trigger: TGTTACAAACACGTGGCTGGTTACGTGTATAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | GACATTACTGAGACTGGTGTGAAGAGGGGATTCGACTaGGGATCAACTAATGTCTGGTTGTCTATACACGTA | + |
|
Preference number: 6 (lower is better) Translates to: DITETGVKRGFD*GSTNVWLSIHV Trigger: TACGTGTATAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTTCACACCAGTCTCAGTAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TCCGTCACATCAAAGGATGGCTTGAAAAGCTTGTCCTaGGACAGAAACTTTGATGGTGTGTCCAGGTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SVTSKDGLKSLS*DRNFDGVSRCK Trigger: TTTACACCTGGACACACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | TTTACAGTCATCTCTTCCACTCCCATTCAACAGAGGTaGCTCTTTGTCATTTGTGCCCATAGTGTTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FTVISSTPIQQR*LFVICAHSVCL Trigger: GAGACAAACACTATGGGCACAAATGACAAAGAGTCACCTCTGTTGAATGGGAGTGGAAGAGATGACTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS TCA 72 bp | CACGGTAATTGTCTGCACAAGGAGGGGATTCCAGCATaGGATAATCAGCGATATATTCTGTTTTCAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HGNCLHKEGIPA*DNQRYILFSSR Trigger: TCTGCTTGAAAACAGAATATATCGCTGATTATCTCATGCTGGAATCCCCTCCTTGTGCAGACAATTACCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | CACTATAAGATGTGTGCTGGCGAGCATGCCTTTCTTTaGATTGGCTTTGCGAACAAAGAATTCTTGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: HYKMCAGEHAFL*IGFANKEFLNT Trigger: AGTGTTCAAGAATTCTTTGTTCGCAAAGCCAATGCAAAGAAAGGCATGCTCGCCAGCACACATCTTATAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | TGCCTTTCTTTGCATTGGCTTTGCGAACAAAGAATTCTTGAACACTaGCTCCAAGGTGATTTGCTAAGAATACCAAGGAATCTCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLSLHWLCEQRILEH*LQGDLLRIPRNLFL Trigger: CAGAAAGAGATTCCTTGGTATTCTTAGCAAATCACCTTGGAGCAAGTGTTCAAGAATTCTTTGTTCGCAAAGCCAATGCAAAGAAAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | CTGTATACTCGTCCACCCATCATTTGTACGTATTTATaGACTTCTTCCCGTTTGTCTTTATCCAGGCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LYTRPPIICTYL*TSSRLSLSRLV Trigger: TACAAGCCTGGATAAAGACAAACGGGAAGAAGTTCATAAATACGTACAAATGATGGGTGGACGAGTATACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS TCA 72 bp | AAGTACTTTTTGCTCCCAACTTCTCCTGCAATAAGGTaGGTGACTGATACATTAAGGTCTCTGTATACTCGT | + |
|
Preference number: 6 (lower is better) Translates to: KYFLLPTSPAIR*VTDTLRSLYTR Trigger: ACGAGTATACAGAGACCTTAATGTATCAGTCACTCACCTTATTGCAGGAGAAGTTGGGAGCAAAAAGTACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CCA 72 bp | ATTCCATCTCCTGGCACATTCGTATTTTTGTCCTTTTaGTTCTTGCACAATGAGGTGTGTACACTCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IPSPGTFVFLSF*FLHNEVCTLIH Trigger: ATGAATGAGTGTACACACCTCATTGTGCAAGAACCAAAAGGACAAAAATACGAATGTGCCAGGAGATGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | TCTCCTGGCACATTCGTATTTTTGTCCTTTTGGTTCTaGCACAATGAGGTGTGTACACTCATTCATCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPGTFVFLSFWF*HNEVCTLIHLQ Trigger: TTGAAGATGAATGAGTGTACACACCTCATTGTGCAAGAACCAAAAGGACAAAAATACGAATGTGCCAGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 72 bp | GAACAAAGAATTCTTGAACACTTGCTCCAAGGTGATTaGCTAAGAATACCAAGGAATCTCTTTCTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQRILEHLLQGD*LRIPRNLFLLP Trigger: TGGGAGCAGAAAGAGATTCCTTGGTATTCTTAGCAAATCACCTTGGAGCAAGTGTTCAAGAATTCTTTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS GCA 72 bp | TTCCTTTGCAGATTTATATTCTCGATTACTGTCATTTaGCCGACCCTGGTAAATGAAATGAGTAACAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLCRFIFSITVI*PTLVNEMSNSL Trigger: GAGACTGTTACTCATTTCATTTACCAGGGTCGGGCAAATGACAGTAATCGAGAATATAAATCTGCAAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000185721.2 |
||
| CDS CAA 72 bp | TTGCATTGGCTTTGCGAACAAAGAATTCTTGAACACTaGCTCCAAGGTGATTTGCTAAGAATACCAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LHWLCEQRILEH*LQGDLLRIPRN Trigger: ATTCCTTGGTATTCTTAGCAAATCACCTTGGAGCAAGTGTTCAAGAATTCTTTGTTCGCAAAGCCAATGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
||
| CDS CAA 90 bp | TTTGTACGTATTTATGAACTTCTTCCCGTTTGTCTTTATCCAGGCTaGTACAGGATACAGTTACGTCAGACATTATCATGTTGTAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FVRIYELLPVCLYPG*YRIQLRQTLSCCRL Trigger: CAGTCTACAACATGATAATGTCTGACGTAACTGTATCCTGTACAAGCCTGGATAAAGACAAACGGGAAGAAGTTCATAAATACGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
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| CDS TCA 72 bp | TATATCCGACAGCCATCTAATAAGTCTTCAGGAGCTTaGAACATACTGATGTCCAGATTTTCTAGGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: YIRQPSNKSSGA*NILMSRFSRFS Trigger: TGAAAACCTAGAAAATCTGGACATCAGTATGTTTCAAGCTCCTGAAGACTTATTAGATGGCTGTCGGATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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| CDS CAA 72 bp | ATTTATGAACTTCTTCCCGTTTGTCTTTATCCAGGCTaGTACAGGATACAGTTACGTCAGACATTATCATGT | + |
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Preference number: 6 (lower is better) Translates to: IYELLPVCLYPG*YRIQLRQTLSC Trigger: ACATGATAATGTCTGACGTAACTGTATCCTGTACAAGCCTGGATAAAGACAAACGGGAAGAAGTTCATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035164.10 ENSMUST00000187065.2 |
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| CDS CAA 72 bp | TACATTAAGGTCTCTGTATACTCGTCCACCCATCATTaGTACGTATTTATGAACTTCTTCCCGTTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: YIKVSVYSSTHH*YVFMNFFPFVF Trigger: AAAGACAAACGGGAAGAAGTTCATAAATACGTACAAATGATGGGTGGACGAGTATACAGAGACCTTAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035164.10 |
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