Pregenerated sensors for TOPAZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094985Ensembl transcript IDs: ENSMUST00000178679.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTCTGGCGTCAGCGGAAGGCCTCGCTTCCTCAGGCCTCGGGTGGTaGCTTTGCACCCTGGCTCCTTGGTCGGGTCTGGGGGCGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: ALASAEGLASSGLGW*LCTLAPWSGLGASL Trigger: CAGCGACGCCCCCAGACCCGACCAAGGAGCCAGGGTGCAAAGGCACCACCCGAGGCCTGAGGAAGCGAGGCCTTCCGCTGACGCCAGAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 90 bp | CTGGCTCTGGCGTCAGCGGAAGGCCTCGCTTCCTCAGGCCTCGGGTaGTGCCTTTGCACCCTGGCTCCTTGGTCGGGTCTGGGGGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: LALASAEGLASSGLG*CLCTLAPWSGLGAS Trigger: CGACGCCCCCAGACCCGACCAAGGAGCCAGGGTGCAAAGGCACCACCCGAGGCCTGAGGAAGCGAGGCCTTCCGCTGACGCCAGAGCCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TCACCTTCTGTCTCTTCTCTCCCAGAAGCCTGGGTCACCATCCTCTaGTTCTGCCTGCTCTCCTCCTCGCACCCCCTGGCCTCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPSVSSLPEAWVTIL*FCLLSSSHPLASRL Trigger: CAGCCTGGAGGCCAGGGGGTGCGAGGAGGAGAGCAGGCAGAAGCAGAGGATGGTGACCCAGGCTTCTGGGAGAGAAGAGACAGAAGGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | AACTTATGCACTTCGCGTCTGAGTCTGAAGCCCGCGCTTGTTCACTaGGGCCTTCTAGGCTTCCACTTACAACAGTCTCCTCAGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: NLCTSRLSLKPALVH*GLLGFHLQQSPQWL Trigger: AAGCCACTGAGGAGACTGTTGTAAGTGGAAGCCTAGAAGGCCTCAGTGAACAAGCGCGGGCTTCAGACTCAGACGCGAAGTGCATAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 90 bp | CTAGGCTTCCACTTACAACAGTCTCCTCAGTGGCTTCTAAGGAGATaGCTGCTCCTTCAGGATCATGCTGAGGCTCCTTTGCTGCTGACA | + |
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Preference number: 5 (lower is better) Translates to: LGFHLQQSPQWLLRR*LLLQDHAEAPLLLT Trigger: TGTCAGCAGCAAAGGAGCCTCAGCATGATCCTGAAGGAGCAGCCATCTCCTTAGAAGCCACTGAGGAGACTGTTGTAAGTGGAAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | GGAAGTGCTGATGAGCACAGAGGGTTGGGGCCCAGTGTTGCTAACTaGCACTCAGTAGCTGACTCCACATTTCTAGAATCTTTGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: GSADEHRGLGPSVAN*HSVADSTFLESLLL Trigger: CAAAAGCAAAGATTCTAGAAATGTGGAGTCAGCTACTGAGTGTCAGTTAGCAACACTGGGCCCCAACCCTCTGTGCTCATCAGCACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | GATCTTCTCATCCCCCTGCTCAGGCACATGGACAAACTTGCACTGTaGTCGCTCACAGCCACGCAATGTGTTAAAATGAAGTTTGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: DLLIPLLRHMDKLAL*SLTATQCVKMKFAV Trigger: TACTGCAAACTTCATTTTAACACATTGCGTGGCTGTGAGCGAGCACAGTGCAAGTTTGTCCATGTGCCTGAGCAGGGGGATGAGAAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TCTTTTCAGGACAATCTGCAGCACCTGTGTGGGCGCTCCCATTCCTaGACTCTGAATGCCACTAGCATTGGACACCAGAAATATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SFQDNLQHLCGRSHS*TLNATSIGHQKYFH Trigger: ATGGAAATATTTCTGGTGTCCAATGCTAGTGGCATTCAGAGTGCAGGAATGGGAGCGCCCACACAGGTGCTGCAGATTGTCCTGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | ACAAACTTGCACTGTGCTCGCTCACAGCCACGCAATGTGTTAAAATaGAGTTTGCAGTATCTGTGGGGTATCAACAACCCTAAGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TNLHCARSQPRNVLK*SLQYLWGINNPKGF Trigger: GAAGCCCTTAGGGTTGTTGATACCCCACAGATACTGCAAACTTCATTTTAACACATTGCGTGGCTGTGAGCGAGCACAGTGCAAGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TCACTCAAGGCTGAGTCTAAGTCACACTTCCAGTTCTTTTTCAGCTaGCTCACTCGCAACCTGGATTTGGCTTGCAGAACTGCAGATATT | + |
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Preference number: 5 (lower is better) Translates to: SLKAESKSHFQFFFS*LTRNLDLACRTADI Trigger: AATATCTGCAGTTCTGCAAGCCAAATCCAGGTTGCGAGTGAGGCAGCTGAAAAAGAACTGGAAGTGTGACTTAGACTCAGCCTTGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TGCTCCAGACTGTACACCTGCTCCTTGTTAATATTGACAGTCATGTaGTTAATGAAAAGCTTGGGGTCCGATATTCGAGCAGCCATGACC | + |
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Preference number: 5 (lower is better) Translates to: CSRLYTCSLLILTVM*LMKSLGSDIRAAMT Trigger: GGTCATGGCTGCTCGAATATCGGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGTGTACAGTCTGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 90 bp | TGCTTAAAATCTGCTGTTGGTTGGTCTTCAGATACTCTGGGCTCCTaGCTTATCTTGGAGACTTCTGAAGCAAAGGAAAGATCCCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CLKSAVGWSSDTLGS*LILETSEAKERSPS Trigger: TGAGGGGGATCTTTCCTTTGCTTCAGAAGTCTCCAAGATAAGCCAGGAGCCCAGAGTATCTGAAGACCAACCAACAGCAGATTTTAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | TCAGTTTCACTTCTCAGATCTCCCCGTGGAGATCTCTTTTCCATATaGTGGCCGTCACTAGGTGATTTCACTGTAGAGCTTATCATCGAT | + |
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Preference number: 5 (lower is better) Translates to: SVSLLRSPRGDLFSI*WPSLGDFTVELIID Trigger: ATCGATGATAAGCTCTACAGTGAAATCACCTAGTGACGGCCATCATATGGAAAAGAGATCTCCACGGGGAGATCTGAGAAGTGAAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | AAGCTTGGGGTCCGATATTCGAGCAGCCATGACCAATCTTTCTACTaGAGCTTGATATTCATCCTTGCTTCGAGATTTGCTTTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: KLGVRYSSSHDQSFY*SLIFILASRFAFFT Trigger: TGTGAAGAAAGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGGTCATGGCTGCTCGAATATCGGACCCCAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | GGGTCCGATATTCGAGCAGCCATGACCAATCTTTCTACTGCAGCTTaGTATTCATCCTTGCTTCGAGATTTGCTTTCTTCACATCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GSDIRAAMTNLSTAA*YSSLLRDLLSSHLF Trigger: GAAAAGATGTGAAGAAAGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGGTCATGGCTGCTCGAATATCGGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TATCCCTGGGGGAAACTTTCTGTAGTACTCCAGAAATATGTATGCTaGTCGATGCAGCAAACGCTGCTCATTGACACTTATGTATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: YPWGKLSVVLQKYVC*SMQQTLLIDTYVFP Trigger: AGGAAATACATAAGTGTCAATGAGCAGCGTTTGCTGCATCGAGCAGCATACATATTTCTGGAGTACTACAGAAAGTTTCCCCCAGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | GTGTATCCCTGGGGGAAACTTTCTGTAGTACTCCAGAAATATGTATaGTGCTCGATGCAGCAAACGCTGCTCATTGACACTTATGTATTT | + |
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Preference number: 5 (lower is better) Translates to: VYPWGKLSVVLQKYV*CSMQQTLLIDTYVF Trigger: AAATACATAAGTGTCAATGAGCAGCGTTTGCTGCATCGAGCAGCATACATATTTCTGGAGTACTACAGAAAGTTTCCCCCAGGGATACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | GAGAAAGGAAAAGTCAATAGGGATGCTCTTGGCAACCATGAACTCTaGTACAGAAGACGATATGCCAAGACTGTTACTTTCTATACAGGC | + |
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Preference number: 5 (lower is better) Translates to: EKGKVNRDALGNHEL*YRRRYAKTVTFYTG Trigger: GCCTGTATAGAAAGTAACAGTCTTGGCATATCGTCTTCTGTAGCAGAGTTCATGGTTGCCAAGAGCATCCCTATTGACTTTTCCTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | CCAATCTTTCTACTGCAGCTTGATATTCATCCTTGCTTCGAGATTTaGTTTCTTCACATCTTTTCAGGACAATCTGCAGCACCTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PIFLLQLDIHPCFEI*FLHIFSGQSAAPVW Trigger: CCACACAGGTGCTGCAGATTGTCCTGAAAAGATGTGAAGAAAGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 90 bp | TATTTTGAAATTCACTGCACTCCACTGTTTGCAAAGACTCCGAACTaGTTATTGATGTCTTTCTTACCAGGTCAGTCCCTGGCTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: YFEIHCTPLFAKTPN*LLMSFLPGQSLAVD Trigger: ATCCACAGCCAGGGACTGACCTGGTAAGAAAGACATCAATAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCAGTGAATTTCAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 90 bp | TGGATCTTTGCTAACTGTTTCAGCAAATTCACAAAAAGGAACGCCTaGCCTCTCTTCTTTGTAATCTTCTGTGAGCGTCTCAGCAACACA | + |
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Preference number: 5 (lower is better) Translates to: WIFANCFSKFTKRNA*PLFFVIFCERLSNT Trigger: TGTGTTGCTGAGACGCTCACAGAAGATTACAAAGAAGAGAGGCCAGGCGTTCCTTTTTGTGAATTTGCTGAAACAGTTAGCAAAGATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | AAGTCCGGTGCCACAAGTGTTTGCTTAGTAATACAAACTTTTCGATaGACAGTTTTATTTGCACAGTTATTTGTTTCCTGGCTCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KSGATSVCLVIQTFR*TVLFAQLFVSWLSW Trigger: CCAAGAGAGCCAGGAAACAAATAACTGTGCAAATAAAACTGTTCATCGAAAAGTTTGTATTACTAAGCAAACACTTGTGGCACCGGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | CTTCCTTATCCAAAGACTGTAAGAAAGCCATATTTTGAAATTCACTaGACTCCACTGTTTGCAAAGACTCCGAACTGGTTATTGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: LPYPKTVRKPYFEIH*TPLFAKTPNWLLMS Trigger: AGACATCAATAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCAGTGAATTTCAAAATATGGCTTTCTTACAGTCTTTGGATAAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | AGTAATATTTTCAGAGCAGGCAGCATTTTAGCCATTATGCTGAGCTaGACTACCTGGAAGACTTCTTTCAATAAACAATGCTTGAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SNIFRAGSILAIMLS*TTWKTSFNKQCLSK Trigger: TTTACTCAAGCATTGTTTATTGAAAGAAGTCTTCCAGGTAGTGCAGCTCAGCATAATGGCTAAAATGCTGCCTGCTCTGAAAATATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | GACCTCAAATGTTTGTTTGTAAAGATTCTTGCCCAAGATTTCATGTaGAATGGTACAGAGCAAATTATGCCGATTAAGCACATCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: DLKCLFVKILAQDFM*NGTEQIMPIKHIHS Trigger: AGAATGGATGTGCTTAATCGGCATAATTTGCTCTGTACCATTGCACATGAAATCTTGGGCAAGAATCTTTACAAACAAACATTTGAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 90 bp | TTGGTAGATTCCGTAAGACCTCAAATGTTTGTTTGTAAAGATTCTTaGCCAAGATTTCATGTGCAATGGTACAGAGCAAATTATGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: LVDSVRPQMFVCKDS*PRFHVQWYRANYAD Trigger: ATCGGCATAATTTGCTCTGTACCATTGCACATGAAATCTTGGGCAAGAATCTTTACAAACAAACATTTGAGGTCTTACGGAATCTACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 90 bp | GTTCTTTCTGTTAAGGATGGTTGTAACAGTTTAGAGTCAGGTAAGTaGGTCTGGTTCATTTGGTGTATTATAGAATCATGTTGCCTAACA | + |
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Preference number: 5 (lower is better) Translates to: VLSVKDGCNSLESGK*VWFIWCIIESCCLT Trigger: TGTTAGGCAACATGATTCTATAATACACCAAATGAACCAGACTCACTTACCTGACTCTAAACTGTTACAACCATCCTTAACAGAAAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | TCGCTTCCTCAGGCCTCGGGTGGTGCCTTTGCACCCTaGCTCCTTGGTCGGGTCTGGGGGCGTCGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLPQASGGAFAP*LLGRVWGRRWR Trigger: CCGCCAGCGACGCCCCCAGACCCGACCAAGGAGCCAGGGTGCAAAGGCACCACCCGAGGCCTGAGGAAGCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | GGAAGGCCTCGCTTCCTCAGGCCTCGGGTGGTGCCTTaGCACCCTGGCTCCTTGGTCGGGTCTGGGGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: GRPRFLRPRVVP*HPGSLVGSGGV Trigger: GACGCCCCCAGACCCGACCAAGGAGCCAGGGTGCAAAGGCACCACCCGAGGCCTGAGGAAGCGAGGCCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | GCGTCAGCGGAAGGCCTCGCTTCCTCAGGCCTCGGGTaGTGCCTTTGCACCCTGGCTCCTTGGTCGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASAEGLASSGLG*CLCTLAPWSGL Trigger: CAGACCCGACCAAGGAGCCAGGGTGCAAAGGCACCACCCGAGGCCTGAGGAAGCGAGGCCTTCCGCTGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | TCCCAGAAGCCTGGGTCACCATCCTCTGCTTCTGCCTaGTCTCCTCCTCGCACCCCCTGGCCTCCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SQKPGSPSSASA*SPPRTPWPPGC Trigger: GCAGCCTGGAGGCCAGGGGGTGCGAGGAGGAGAGCAGGCAGAAGCAGAGGATGGTGACCCAGGCTTCTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | GTCTCTTCTCTCCCAGAAGCCTGGGTCACCATCCTCTaGTTCTGCCTGCTCTCCTCCTCGCACCCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSLPEAWVTIL*FCLLSSSHPLA Trigger: GGCCAGGGGGTGCGAGGAGGAGAGCAGGCAGAAGCAGAGGATGGTGACCCAGGCTTCTGGGAGAGAAGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | GCTTCTAAGGAGATGGCTGCTCCTTCAGGATCATGCTaGGGCTCCTTTGCTGCTGACAAGGAAGGACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASKEMAAPSGSC*GSFAADKEGQL Trigger: GAGCTGTCCTTCCTTGTCAGCAGCAAAGGAGCCTCAGCATGATCCTGAAGGAGCAGCCATCTCCTTAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | ACTTCGCGTCTGAGTCTGAAGCCCGCGCTTGTTCACTaGGGCCTTCTAGGCTTCCACTTACAACAGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TSRLSLKPALVH*GLLGFHLQQSP Trigger: AGGAGACTGTTGTAAGTGGAAGCCTAGAAGGCCTCAGTGAACAAGCGCGGGCTTCAGACTCAGACGCGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | TGCTCCTTCAGGATCATGCTGAGGCTCCTTTGCTGCTaGCAAGGAAGGACAGCTCTCCAGTTTCAGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: CSFRIMLRLLCC*QGRTALQFQQS Trigger: GGATTGCTGAAACTGGAGAGCTGTCCTTCCTTGTCAGCAGCAAAGGAGCCTCAGCATGATCCTGAAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | AGATGGCTGCTCCTTCAGGATCATGCTGAGGCTCCTTaGCTGCTGACAAGGAAGGACAGCTCTCCAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RWLLLQDHAEAP*LLTRKDSSPVS Trigger: TGAAACTGGAGAGCTGTCCTTCCTTGTCAGCAGCAAAGGAGCCTCAGCATGATCCTGAAGGAGCAGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | ATCCCCCTGCTCAGGCACATGGACAAACTTGCACTGTaGTCGCTCACAGCCACGCAATGTGTTAAAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: IPLLRHMDKLAL*SLTATQCVKMK Trigger: CTTCATTTTAACACATTGCGTGGCTGTGAGCGAGCACAGTGCAAGTTTGTCCATGTGCCTGAGCAGGGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | CACTTACAACAGTCTCCTCAGTGGCTTCTAAGGAGATaGCTGCTCCTTCAGGATCATGCTGAGGCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HLQQSPQWLLRR*LLLQDHAEAPL Trigger: CAAAGGAGCCTCAGCATGATCCTGAAGGAGCAGCCATCTCCTTAGAAGCCACTGAGGAGACTGTTGTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | GGCCTTCTAGGCTTCCACTTACAACAGTCTCCTCAGTaGCTTCTAAGGAGATGGCTGCTCCTTCAGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: GLLGFHLQQSPQ*LLRRWLLLQDH Trigger: ATGATCCTGAAGGAGCAGCCATCTCCTTAGAAGCCACTGAGGAGACTGTTGTAAGTGGAAGCCTAGAAGGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | AGATACTCTGGGCTCCTGGCTTATCTTGGAGACTTCTaGAGCAAAGGAAAGATCCCCCTCACTGGAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: RYSGLLAYLGDF*SKGKIPLTGDS Trigger: GGAATCTCCAGTGAGGGGGATCTTTCCTTTGCTTCAGAAGTCTCCAAGATAAGCCAGGAGCCCAGAGTATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | GATGAGCACAGAGGGTTGGGGCCCAGTGTTGCTAACTaGCACTCAGTAGCTGACTCCACATTTCTAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: DEHRGLGPSVAN*HSVADSTFLES Trigger: AGATTCTAGAAATGTGGAGTCAGCTACTGAGTGTCAGTTAGCAACACTGGGCCCCAACCCTCTGTGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | TCATCACTTGGGGCCTCAGTAATTTTTCCATTCTCTTTGGCCAACTaGTCACCTTCTGTCTCTTCTCTCCCAGAAGCCTGGGTCACCATC | + |
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Preference number: 6 (lower is better) Translates to: SSLGASVIFPFSLAN*SPSVSSLPEAWVTI Trigger: GATGGTGACCCAGGCTTCTGGGAGAGAAGAGACAGAAGGTGACAAGTTGGCCAAAGAGAATGGAAAAATTACTGAGGCCCCAAGTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | TCTGCTGTTGGTTGGTCTTCAGATACTCTGGGCTCCTGGCTTATCTaGGAGACTTCTGAAGCAAAGGAAAGATCCCCCTCACTGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: SAVGWSSDTLGSWLI*ETSEAKERSPSLEI Trigger: AATCTCCAGTGAGGGGGATCTTTCCTTTGCTTCAGAAGTCTCCAAGATAAGCCAGGAGCCCAGAGTATCTGAAGACCAACCAACAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | AAGGAACGCCTGGCCTCTCTTCTTTGTAATCTTCTGTaGGCGTCTCAGCAACACAAGCACAGAATCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KERLASLLCNLL*ASQQHKHRISA Trigger: TGCAGAGATTCTGTGCTTGTGTTGCTGAGACGCTCACAGAAGATTACAAAGAAGAGAGGCCAGGCGTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | GCTGAGTCTAAGTCACACTTCCAGTTCTTTTTCAGCTaGCTCACTCGCAACCTGGATTTGGCTTGCAGAACT | + |
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Preference number: 6 (lower is better) Translates to: AESKSHFQFFFS*LTRNLDLACRT Trigger: AGTTCTGCAAGCCAAATCCAGGTTGCGAGTGAGGCAGCTGAAAAAGAACTGGAAGTGTGACTTAGACTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | TCTTACCAGGTCAGTCCCTGGCTGTGGATCATCACTTaGGGCCTCAGTAATTTTTCCATTCTCTTTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SYQVSPWLWIIT*GLSNFSILFGQ Trigger: TTGGCCAAAGAGAATGGAAAAATTACTGAGGCCCCAAGTGATGATCCACAGCCAGGGACTGACCTGGTAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | TGCACTCCACTGTTTGCAAAGACTCCGAACTGGTTATaGATGTCTTTCTTACCAGGTCAGTCCCTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CTPLFAKTPNWL*MSFLPGQSLAV Trigger: CACAGCCAGGGACTGACCTGGTAAGAAAGACATCAATAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | CTTCCAGTTCTTTTTCAGCTGCCTCACTCGCAACCTGGATTTGGCTaGCAGAACTGCAGATATTTCTTGTTGGGATGCCTGTGCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LPVLFQLPHSQPGFG*QNCRYFLLGCLCLM Trigger: CATCAAGCACAGGCATCCCAACAAGAAATATCTGCAGTTCTGCAAGCCAAATCCAGGTTGCGAGTGAGGCAGCTGAAAAAGAACTGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | GAAATTCACTGCACTCCACTGTTTGCAAAGACTCCGAACTGGTTATaGATGTCTTTCTTACCAGGTCAGTCCCTGGCTGTGGATCATCAC | + |
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Preference number: 6 (lower is better) Translates to: EIHCTPLFAKTPNWL*MSFLPGQSLAVDHH Trigger: GTGATGATCCACAGCCAGGGACTGACCTGGTAAGAAAGACATCAATAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCAGTGAATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | CTTCTCAGATCTCCCCGTGGAGATCTCTTTTCCATATaGTGGCCGTCACTAGGTGATTTCACTGTAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLRSPRGDLFSI*WPSLGDFTVEL Trigger: AAGCTCTACAGTGAAATCACCTAGTGACGGCCATCATATGGAAAAGAGATCTCCACGGGGAGATCTGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | CACTGTGCTCGCTCACAGCCACGCAATGTGTTAAAATaGAGTTTGCAGTATCTGTGGGGTATCAACAACCCT | + |
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Preference number: 6 (lower is better) Translates to: HCARSQPRNVLK*SLQYLWGINNP Trigger: AGGGTTGTTGATACCCCACAGATACTGCAAACTTCATTTTAACACATTGCGTGGCTGTGAGCGAGCACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | TCTGCTGTTGGTTGGTCTTCAGATACTCTGGGCTCCTaGCTTATCTTGGAGACTTCTGAAGCAAAGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SAVGWSSDTLGS*LILETSEAKER Trigger: TCTTTCCTTTGCTTCAGAAGTCTCCAAGATAAGCCAGGAGCCCAGAGTATCTGAAGACCAACCAACAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | TGCCGATTAAGCACATCCATTCTATCACAAGGCCAAAGTGGTGTGTaGATTATCCATTCCGATTCCCTTAGGACCCAAATGGCACCATCT | + |
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Preference number: 6 (lower is better) Translates to: CRLSTSILSQGQSGV*IIHSDSLRTQMAPS Trigger: AGATGGTGCCATTTGGGTCCTAAGGGAATCGGAATGGATAATCAACACACCACTTTGGCCTTGTGATAGAATGGATGTGCTTAATCGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | GAAGTGATGAGTCTCCTGAGAAAGGAAAAGTCAATAGGGATGCTCTaGGCAACCATGAACTCTGCTACAGAAGACGATATGCCAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: EVMSLLRKEKSIGML*ATMNSATEDDMPRL Trigger: CAGTCTTGGCATATCGTCTTCTGTAGCAGAGTTCATGGTTGCCAAGAGCATCCCTATTGACTTTTCCTTTCTCAGGAGACTCATCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | ATTCACTGCACTCCACTGTTTGCAAAGACTCCGAACTaGTTATTGATGTCTTTCTTACCAGGTCAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: IHCTPLFAKTPN*LLMSFLPGQSL Trigger: CAGGGACTGACCTGGTAAGAAAGACATCAATAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCAGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | CAGTGCTCCAGACTGTACACCTGCTCCTTGTTAATATaGACAGTCATGTGCTTAATGAAAAGCTTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QCSRLYTCSLLI*TVMCLMKSLGS Trigger: GGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGTGTACAGTCTGGAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | ATCCTTCCCAACAAAGTCTTATCCACCTCACTGTACTGTGGATCTTaGCTAACTGTTTCAGCAAATTCACAAAAAGGAACGCCTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ILPNKVLSTSLYCGS*LTVSANSQKGTPGL Trigger: GAGGCCAGGCGTTCCTTTTTGTGAATTTGCTGAAACAGTTAGCAAAGATCCACAGTACAGTGAGGTGGATAAGACTTTGTTGGGAAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | AGCCATTTCAAAGCAGAACAGTGCTCCAGACTGTACACCTGCTCCTaGTTAATATTGACAGTCATGTGCTTAATGAAAAGCTTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SHFKAEQCSRLYTCS*LILTVMCLMKSLGS Trigger: GGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGTGTACAGTCTGGAGCACTGTTCTGCTTTGAAATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | CATTTATCCAGGGTGTTGACACTACATCTTGATGACTaGTTAGATTCACAGGAAGTGCTGATGAGCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: HLSRVLTLHLDD*LDSQEVLMSTE Trigger: CTCTGTGCTCATCAGCACTTCCTGTGAATCTAAGCAGTCATCAAGATGTAGTGTCAACACCCTGGATAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | GTCCGATATTCGAGCAGCCATGACCAATCTTTCTACTaGAGCTTGATATTCATCCTTGCTTCGAGATTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VRYSSSHDQSFY*SLIFILASRFA Trigger: AGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGGTCATGGCTGCTCGAATATCGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | TGGAGACTTCTGAAGCAAAGGAAAGATCCCCCTCACTaGAGATTCCAAAGAGCTCTGGATCATCTTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: WRLLKQRKDPPH*RFQRALDHLEL Trigger: TAATTCAAGATGATCCAGAGCTCTTTGGAATCTCCAGTGAGGGGGATCTTTCCTTTGCTTCAGAAGTCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | GCTAACTGTTTCAGCAAATTCACAAAAAGGAACGCCTaGCCTCTCTTCTTTGTAATCTTCTGTGAGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ANCFSKFTKRNA*PLFFVIFCERL Trigger: GAGACGCTCACAGAAGATTACAAAGAAGAGAGGCCAGGCGTTCCTTTTTGTGAATTTGCTGAAACAGTTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | AGCACATCCATTCTATCACAAGGCCAAAGTGGTGTGTaGATTATCCATTCCGATTCCCTTAGGACCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: STSILSQGQSGV*IIHSDSLRTQM Trigger: CATTTGGGTCCTAAGGGAATCGGAATGGATAATCAACACACCACTTTGGCCTTGTGATAGAATGGATGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | AGTCTCCTGAGAAAGGAAAAGTCAATAGGGATGCTCTaGGCAACCATGAACTCTGCTACAGAAGACGATATG | + |
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Preference number: 6 (lower is better) Translates to: SLLRKEKSIGML*ATMNSATEDDM Trigger: CATATCGTCTTCTGTAGCAGAGTTCATGGTTGCCAAGAGCATCCCTATTGACTTTTCCTTTCTCAGGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | GGGGTCCGATATTCGAGCAGCCATGACCAATCTTTCTACTGCAGCTaGATATTCATCCTTGCTTCGAGATTTGCTTTCTTCACATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GVRYSSSHDQSFYCS*IFILASRFAFFTSF Trigger: AAAAGATGTGAAGAAAGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGGTCATGGCTGCTCGAATATCGGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | ACCTGCTCCTTGTTAATATTGACAGTCATGTGCTTAATGAAAAGCTaGGGGTCCGATATTCGAGCAGCCATGACCAATCTTTCTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TCSLLILTVMCLMKS*GSDIRAAMTNLSTA Trigger: TGCAGTAGAAAGATTGGTCATGGCTGCTCGAATATCGGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | GGGAAACTTTCTGTAGTACTCCAGAAATATGTATGCTaGTCGATGCAGCAAACGCTGCTCATTGACACTTAT | + |
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Preference number: 6 (lower is better) Translates to: GKLSVVLQKYVC*SMQQTLLIDTY Trigger: ATAAGTGTCAATGAGCAGCGTTTGCTGCATCGAGCAGCATACATATTTCTGGAGTACTACAGAAAGTTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | TTCAGAGCAGGCAGCATTTTAGCCATTATGCTGAGCTaGACTACCTGGAAGACTTCTTTCAATAAACAATGC | + |
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Preference number: 6 (lower is better) Translates to: FRAGSILAIMLS*TTWKTSFNKQC Trigger: GCATTGTTTATTGAAAGAAGTCTTCCAGGTAGTGCAGCTCAGCATAATGGCTAAAATGCTGCCTGCTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | AAAGTCAATAGGGATGCTCTTGGCAACCATGAACTCTaGTACAGAAGACGATATGCCAAGACTGTTACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KVNRDALGNHEL*YRRRYAKTVTF Trigger: GAAAGTAACAGTCTTGGCATATCGTCTTCTGTAGCAGAGTTCATGGTTGCCAAGAGCATCCCTATTGACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | CTGTACACCTGCTCCTTGTTAATATTGACAGTCATGTaGTTAATGAAAAGCTTGGGGTCCGATATTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LYTCSLLILTVM*LMKSLGSDIRA Trigger: TGCTCGAATATCGGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGTGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | ATTCGAGCAGCCATGACCAATCTTTCTACTGCAGCTTaGTATTCATCCTTGCTTCGAGATTTGCTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: IRAAMTNLSTAA*YSSLLRDLLSS Trigger: TGAAGAAAGCAAATCTCGAAGCAAGGATGAATATCAAGCTGCAGTAGAAAGATTGGTCATGGCTGCTCGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | CCCCTCACTGGAGATTCCAAAGAGCTCTGGATCATCTaGAATTACATCAATCAAGAGGACATCATCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PLTGDSKELWII*NYINQEDIIFI Trigger: TATGAAGATGATGTCCTCTTGATTGATGTAATTCAAGATGATCCAGAGCTCTTTGGAATCTCCAGTGAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | AAAGCAGAACAGTGCTCCAGACTGTACACCTGCTCCTaGTTAATATTGACAGTCATGTGCTTAATGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: KAEQCSRLYTCS*LILTVMCLMKS Trigger: GCTTTTCATTAAGCACATGACTGTCAATATTAACAAGGAGCAGGTGTACAGTCTGGAGCACTGTTCTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 90 bp | GGCTGGACTGGGAAACCCCCATCATTTCTTGAGAATTCTGAAAGCTaGGTAGATTCCGTAAGACCTCAAATGTTTGTTTGTAAAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GWTGKPPSFLENSES*VDSVRPQMFVCKDS Trigger: AGAATCTTTACAAACAAACATTTGAGGTCTTACGGAATCTACCAAGCTTTCAGAATTCTCAAGAAATGATGGGGGTTTCCCAGTCCAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | CCCTCACTGGAGATTCCAAAGAGCTCTGGATCATCTTaGATTACATCAATCAAGAGGACATCATCTTCATAT | + |
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Preference number: 6 (lower is better) Translates to: PSLEIPKSSGSS*ITSIKRTSSSY Trigger: ATATGAAGATGATGTCCTCTTGATTGATGTAATTCAAGATGATCCAGAGCTCTTTGGAATCTCCAGTGAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | CCAAAGACTGTAAGAAAGCCATATTTTGAAATTCACTaGACTCCACTGTTTGCAAAGACTCCGAACTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PKTVRKPYFEIH*TPLFAKTPNWL Trigger: TAACCAGTTCGGAGTCTTTGCAAACAGTGGAGTGCAGTGAATTTCAAAATATGGCTTTCTTACAGTCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS GCA 72 bp | CGTCTCAGCAACACAAGCACAGAATCTCTGCAGATCTaGAAATTCTTCACAACTCATCTTTATGCTAATGTA | + |
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Preference number: 6 (lower is better) Translates to: RLSNTSTESLQI*KFFTTHLYANV Trigger: TACATTAGCATAAAGATGAGTTGTGAAGAATTTGCAGATCTGCAGAGATTCTGTGCTTGTGTTGCTGAGACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CCA 72 bp | CCTTCCCAACAAAGTCTTATCCACCTCACTGTACTGTaGATCTTTGCTAACTGTTTCAGCAAATTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: PSQQSLIHLTVL*IFANCFSKFTK Trigger: TTTTGTGAATTTGCTGAAACAGTTAGCAAAGATCCACAGTACAGTGAGGTGGATAAGACTTTGTTGGGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | GGGAAACCCCCATCATTTCTTGAGAATTCTGAAAGCTaGGTAGATTCCGTAAGACCTCAAATGTTTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GKPPSFLENSES*VDSVRPQMFVC Trigger: ACAAACAAACATTTGAGGTCTTACGGAATCTACCAAGCTTTCAGAATTCTCAAGAAATGATGGGGGTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | TTGTTAATATTGACAGTCATGTGCTTAATGAAAAGCTaGGGGTCCGATATTCGAGCAGCCATGACCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LLILTVMCLMKS*GSDIRAAMTNL Trigger: AAGATTGGTCATGGCTGCTCGAATATCGGACCCCAAGCTTTTCATTAAGCACATGACTGTCAATATTAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | AACAAAGTCTTATCCACCTCACTGTACTGTGGATCTTaGCTAACTGTTTCAGCAAATTCACAAAAAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: NKVLSTSLYCGS*LTVSANSQKGT Trigger: CGTTCCTTTTTGTGAATTTGCTGAAACAGTTAGCAAAGATCCACAGTACAGTGAGGTGGATAAGACTTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | TGGAGATCTCTTTTCCATATGATGGCCGTCACTAGGTaGTTTCACTGTAGAGCTTATCATCGATTTATTATA | + |
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Preference number: 6 (lower is better) Translates to: WRSLFHMMAVTR*FHCRAYHRFII Trigger: TATAATAAATCGATGATAAGCTCTACAGTGAAATCACCTAGTGACGGCCATCATATGGAAAAGAGATCTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS TCA 72 bp | GCCACAAGTGTTTGCTTAGTAATACAAACTTTTCGATaGACAGTTTTATTTGCACAGTTATTTGTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATSVCLVIQTFR*TVLFAQLFVSW Trigger: CCAGGAAACAAATAACTGTGCAAATAAAACTGTTCATCGAAAAGTTTGTATTACTAAGCAAACACTTGTGGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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| CDS CAA 72 bp | ACCACTAATTTCAGAGGAAATTGGCACAAATGCTTCTaGTTTCTTAGAGCAGAAGGAACTTTGATCAATATA | + |
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Preference number: 6 (lower is better) Translates to: TTNFRGNWHKCF*FLRAEGTLINI Trigger: TATATTGATCAAAGTTCCTTCTGCTCTAAGAAACAAGAAGCATTTGTGCCAATTTCCTCTGAAATTAGTGGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178679.3 |
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