Pregenerated sensors for TOP3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022779Ensembl transcript IDs: ENSMUST00000023465.16, ENSMUST00000231812.2, ENSMUST00000231966.2, ENSMUST00000232017.2, ENSMUST00000232080.2, ENSMUST00000232117.2, ENSMUST00000232200.2, ENSMUST00000232231.2, ENSMUST00000232547.2, ENSMUST00000232581.2
Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTTTGCTCAATTAGGACCCAGGCATACCCAGACCAGATAGGTTaGCTACAGCCTGAGCAATGGCACAAGTATTTCTTAGGGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: AVCSIRTQAYPDQIG*LQPEQWHKYFLGSL Trigger: CAGGGACCCTAAGAAATACTTGTGCCATTGCTCAGGCTGTAGCCAACCTATCTGGTCTGGGTATGCCTGGGTCCTAATTGAGCAAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR GCA 90 bp | CAAACCCTCGTTTGCTTCTGTAACTTATTAATGGCTCTTCCAGGTTaGTCTCAGCTCACCTGTTACTTGCTTGCTGCATTGTGCACTGTA | + |
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Preference number: 1 (lower is better) Translates to: QTLVCFCNLLMALPG*SQLTCYLLAALCTV Trigger: TACAGTGCACAATGCAGCAAGCAAGTAACAGGTGAGCTGAGAGCAACCTGGAAGAGCCATTAATAAGTTACAGAAGCAAACGAGGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCTTGGCATGCACGACAAAAAGCAGTGCTaGGAACCCAGGGGGCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: ERVHVLAVSLSGSRLGMHDKKQC*EPRGLG Trigger: ACCAAGCCCCCTGGGTTCTCAGCACTGCTTTTTGTC...GTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCTTATCTGGGGTTGCCTaGCTCTCACTTAGCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: YSVGIFKAVCHHIACIAGLSGVA*LSLSLA Trigger: GGCTAGGCTAAGTGAGAGGCAGGCAACCCCAGATAA...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCGGTGTGTGCACTCATTaGAGCCCATGCCTGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YSVGIFKAVCHHIACIAGGVCTH*SPCLKG Trigger: TCCTTTCAGGCATGGGCTGCAATGAGTGCACACACC...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCCACCTGTTACTTGCTTaGTGCATTGTGCACTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: YSVGIFKAVCHHIACIAGHLLLA*CIVHCK Trigger: CTTACAGTGCACAATGCAGCAAGCAAGTAACAGGTG...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CAA 90 bp | TCTAGAACAACGTGGCACTCACTCTTAACCTGCTTTTGGGATATCTaGTTCACTGGACTGGGTTCCTCTGCTTATCTAAAAATGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRTTWHSLLTCFWDI*FTGLGSSAYLKMCS Trigger: ACTGCACATTTTTAGATAAGCAGAGGAACCCAGTCCAGTGAACAAGATATCCCAAAAGCAGGTTAAGAGTGAGTGCCACGTTGTTCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCTTGGCATGCACCCCAGGGGGCTTGGTTaGTCAGGTGTCCTTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: ERVHVLAVSLSGSRLGMHPRGLG*SGVLIW Trigger: CCAGATAAGGACACCTGACAAACCAAGCCCCCTGGG...GTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | CTGGGAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTaGTTCCAGGCTTGGCATGCACTGCTTAGCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LGAGTCAGSEPL*FQAWHALLSLD Trigger: ATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR TCA 72 bp | ATGGTACTACCTGGGAGCGGGTACATGTGCTGGCAGTaGGCCTCTCTGGTTCCAGGCTTGGCATGCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: MVLPGSGYMCWQ*ASLVPGLACTA Trigger: AGCAGTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTCCCAGGTAGTACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | CTGAAAGGAGAGGAGGCCAGTGACCTAAGCATGCCCTaGCTCCCTCAACTCTGGCTGCTTTCAATGCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LKGEEASDLSMP*LPQLWLLSMPD Trigger: GTCTGGCATTGAAAGCAGCCAGAGTTGAGGGAGCCAGGGCATGCTTAGGTCACTGGCCTCCTCTCCTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCCCCGAGGGGCACATCTaGCCTCCTGCCCAGATCCTA | + |
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Preference number: 3 (lower is better) Translates to: YSVGIFKAVCHHIACIAGPEGHI*PPAQIL Trigger: TAGGATCTGGGCAGGAGGCAAGATGTGCCCCTCGGG...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR GCA 72 bp | GCAGTGAGCCTCTCTGGTTCCAGGCTTGGCATGCACTaGTTAGCCTGGATACATGCTTTCTGTTTCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: AVSLSGSRLGMH*LAWIHAFCFPA Trigger: TGCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | ACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCTTaGCATGCACTGCTTAGCCTGGATACATGCTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: TCAGSEPLWFQA*HALLSLDTCFL Trigger: CAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | CAGGTGTTGCAGGTGTCAGCAGATACCCGTACTCGGTaGGCATTTTCAAAGCAGTGTGCCACCACATTGCAT | + |
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Preference number: 3 (lower is better) Translates to: QVLQVSADTRTR*AFSKQCATTLH Trigger: ATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTACGGGTATCTGCTGACACCTGCAACACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | CTCTCTGGTTCCAGGCTTGGCATGCACTGCTTAGCCTaGATACATGCTTTCTGTTTCCCAGCAAAGGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LSGSRLGMHCLA*IHAFCFPAKGV Trigger: TACACCCTTTGCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAACCAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR TCA 72 bp | CTCCCTCAACTCTGGCTGCTTTCAATGCCAGACTGCTaGATTCCTATTCTAGAACAACGTGGCACTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: LPQLWLLSMPDC*IPILEQRGTHS Trigger: AGAGTGAGTGCCACGTTGTTCTAGAATAGGAATTCAGCAGTCTGGCATTGAAAGCAGCCAGAGTTGAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR GCA 72 bp | TTCCAGGCTTGGCATGCACTGCTTAGCCTGGATACATaGTTTCTGTTTCCCAGCAAAGGGTGTAAAGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: FQAWHALLSLDT*FLFPSKGCKVR Trigger: TCTTACTTTACACCCTTTGCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | TCTAGAACAACGTGGCACTCACTCTTAACCTGCTTTTaGGATATCTTGTTCACTGGACTGGGTTCCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: SRTTWHSLLTCF*DILFTGLGSSA Trigger: AGCAGAGGAACCCAGTCCAGTGAACAAGATATCCCAAAAGCAGGTTAAGAGTGAGTGCCACGTTGTTCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CCA 72 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTaGGGAAAAGATAGGTTGTCATACAAAGTAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FSGSKITTMCLE*GKDRLSYKVSS Trigger: GCTGCTTACTTTGTATGACAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR GCA 72 bp | CTTTTGGGATATCTTGTTCACTGGACTGGGTTCCTCTaGTTATCTAAAAATGTGCAGTTCTCAATCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLGYLVHWTGFL*LSKNVQFSIQG Trigger: TCCTTGGATTGAGAACTGCACATTTTTAGATAAGCAGAGGAACCCAGTCCAGTGAACAAGATATCCCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR GCA 90 bp | GGTACTACCTGGGAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGTCACAGTGGGAGCAGTaGAGGCGACTTGGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GTTWERVHVLAVSLSGSRSQWEQ*RRLGLA Trigger: GGCCAAGCCAAGTCGCCTGCACTGCTCCCACTGTGA...CCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTCCCAGGTAGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CAA 72 bp | TGCCTCTCACTTAGCCTAGCCCCCGAGGGGCACATCTaGCCTCCTGCCCAGATCCTAAGTGAGCAAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: CLSLSLAPEGHI*PPAQILSEQAV Trigger: AACAGCTTGCTCACTTAGGATCTGGGCAGGAGGCAAGATGTGCCCCTCGGGGGCTAGGCTAAGTGAGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCCCCGCCCACGACCCTaGCTCCTTCCAGGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLPRPRP*LLPGPP Trigger: AGGTGGGCCTGGAAGGAGGCAGGGTCGTGGGCGGGG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | GAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCTTGGCATGCACGGGGAGTACCAGCTCTaGATCAATCTTGTAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: ERVHVLAVSLSGSRLGMHGEYQL*INLVVT Trigger: GGTTACTACAAGATTGATGCAGAGCTGGTACTCCCC...GTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCCCCGCCCACGACCCTaGCTCCTTCCAGGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDPRPRP*LLPGPP Trigger: AGGTGGGCCTGGAAGGAGGCAGGGTCGTGGGCGGGG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTCCAGGCTTGGCATGCACTGCTTAGCCTGGATACATGCTTTCTGTTTCCCAGCCCACTGCGCTTCGGATaGTGGGGAGTACCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FQAWHALLSLDTCFLFPSPLRFG*WGVPAL Trigger: CAGAGCTGGTACTCCCCACCATCCGAAGCGCAGTGG...GCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| 3UTR CAA 72 bp | TGCTGTGTCTCATTGCCAGGAAGGGGAGACTTGGCCTaGTTGAAGTCTACATCGAGCAAGGCAGCCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: CCVSLPGRGDLA*LKSTSSKAASQ Trigger: CTGCGAGGCTGCCTTGCTCGATGTAGACTTCAACAAGGCCAAGTCTCCCCTTCCTGGCAATGAGACACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCTTGCCCCGGGAGCCTaGGGACCACAGGACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLLAPGA*GPQDQF Trigger: GAACTGGTCCTGTGGTCCTCAGGCTCCCGGGGCAAG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGAGCGTGAGAGGGGCTTaGCAGTGGCAGCCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLSVRGA*QWQPGV Trigger: CACCCCTGGCTGCCACTGGCAAGCCCCTCTCACGCT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTCCAGGCTTGGCATGCACTGCTTAGCCTGGATACATGCTTTCTGTTTCCCAGCCTGCGCTTCGGATGGTaGGGAGTACCAGCTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FQAWHALLSLDTCFLFPSLRFGW*GVPALH Trigger: ATGCAGAGCTGGTACTCCCCACCATCCGAAGCGCAG...GCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR TCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCTGGCGGGCATCCACTaGGAGTGCCTCATTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRLAGIH*ECLIVV Trigger: GACCACAATGAGGCACTCTCAGTGGATGCCCGCCAG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCCCCAGGGTAGGAGTCTaGCATGGCCCAAAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: YSVGIFKAVCHHIACIAGPRVGV*HGPKEM Trigger: CATCTCCTTTGGGCCATGTCAGACTCCTACCCTGGG...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR TCA 90 bp | CCAGCTGACTCCCAAACCCTCGTTTGCTTCTGTAACTTATTAATGGCTCTTCCACAAGGTTGGTGGGCTTaGGTCGGCGGCCACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PADSQTLVCFCNLLMALPQGWWA*VGGHSP Trigger: TGGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTG...TGGAAGAGCCATTAATAAGTTACAGAAGCAAACGAGGGTTTGGGAGTCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATGCACTTCCCACAGCGTaGGAGGGGCTTGCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDALPTA*EGLASG Trigger: GCCACTGGCAAGCCCCTCTCACGCTGTGGGAAGTGC...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCTTGCCCCGGGAGCCTaGGGACCACAGGACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDLAPGA*GPQDQF Trigger: GAACTGGTCCTGTGGTCCTCAGGCTCCCGGGGCAAG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCCGAGTCTGCCCAGTATaGGTGATTGGCCTGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: YSVGIFKAVCHHIACIAGRVCPV*VIGLLS Trigger: CGACAGCAGGCCAATCACCCATACTGGGCAGACTCG...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCACCCTTCTGGCACGTaGGCAGACTCTCTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRHPSGT*ADSLPG Trigger: CCCTGGAAGAGAGTCTGCCCACGTGCCAGAAGGGTG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCCCAGGGTAGGAGTCTaGCATGGCCCAAAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRPRVGV*HGPKEM Trigger: CATCTCCTTTGGGCCATGTCAGACTCCTACCCTGGG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTCCAGGCTTGGCATGCACTGCTTAGCCTGGATACATGCTTTCTGTTTCCCAGCTCACTTCACCCACAGTaGAGGTATCACCCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FQAWHALLSLDTCFLFPSSLHPQ*RYHPSG Trigger: GCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGA...GCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR TCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACAAGGTTGGTGGGCTTaGGTCGGCGGCCACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGQGWWA*VGGHSP Trigger: TGGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGCACTTCCCACAGCGTaGGAGGGGCTTGCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKALPTA*EGLASG Trigger: GCCACTGGCAAGCCCCTCTCACGCTGTGGGAAGTGC...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCAGCTGCTTCTCCACTaGGCTTCGGATGGTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLQLLLH*ASDGGE Trigger: CTCCCCACCATCCGAAGCGCAGTGGAGAAGCAGCTG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGAGCGTGAGAGGGGCTTaGCAGTGGCAGCCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSVRGA*QWQPGV Trigger: CACCCCTGGCTGCCACTGGCAAGCCCCTCTCACGCT...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAAGCGTGAGAGGGGCTTaGCAGTGGCAGCCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSVRGA*QWQPGV Trigger: CACCCCTGGCTGCCACTGGCAAGCCCCTCTCACGCT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCCACTGCGCTTCGGATaGTGGGGAGTACCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLPLRFG*WGVPAL Trigger: CAGAGCTGGTACTCCCCACCATCCGAAGCGCAGTGG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCCACCTGCAGGAACTTaGCCATGTTCAGCTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRPPAGT*PCSAWG Trigger: ACCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGCAAGGTTGGTGGGCTTaGGTCGGCGGCCACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWQGWWA*VGGHSP Trigger: TGGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTG...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TACCCAGACCAGATAGGTTGGCTACAGCCTGAGCAATGGCACAAGTATTTCTTATCCAGGGGCACGCTCTaGCAAGGCATGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPDQIGWLQPEQWHKYFLSRGTL*QGMISV Trigger: CACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGA...TAAGAAATACTTGTGCCATTGCTCAGGCTGTAGCCAACCTATCTGGTCTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATATAGTGGGTAGCTCTTaGCCCGGGAGCCTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDIVGSS*PGSLRT Trigger: GGTCCTCAGGCTCCCGGGGCAAGAGCTACCCACTAT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCGGGGTCACAGAAGATaGAGCCTGTGTGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRRGHRR*SLCAVS Trigger: AGACACAGCACACAGGCTGCATCTTCTGTGACCCCG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACGCAGGTCTAGCTCCTaGCGGGCATCCACTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGRRSSS*RASTES Trigger: ACTCTCAGTGGATGCCCGCCAGGAGCTAGACCTGCG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGCTTGGCATGCACTGCTTAGCCTGGATACATGCTTTCTGTTTCCCAGCTCTCAGCTATTTGCATaGCGTGCTGTGGTCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FQAWHALLSLDTCFLFPSSQLFA*RAVVPY Trigger: GTATGGGACCACAGCACGCCATGCAAATAGCTGAGA...GCTGGGAAACAGAAAGCATGTATCCAGGCTAAGCAGTGCATGCCAAGCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR CCA 90 bp | TACTCGGTGGGCATTTTCAAAGCAGTGTGCCACCACATTGCATGTATTGCAGGCCATGTCTCGGAAGGGTaGGTGGTTATAGCAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSVGIFKAVCHHIACIAGHVSEG*VVIAVG Trigger: CCCTACTGCTATAACCACCCACCCTTCCGAGACATG...GCCTGCAATACATGCAATGTGGTGGCACACTGCTTTGAAAATGCCCACCGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| 3UTR CAA 72 bp | ATGGCTCTTCCAGGTTGCTCTCAGCTCACCTGTTACTaGCTTGCTGCATTGTGCACTGTAAGACACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MALPGCSQLTCY*LAALCTVRHLG Trigger: CCCCAAGTGTCTTACAGTGCACAATGCAGCAAGCAAGTAACAGGTGAGCTGAGAGCAACCTGGAAGAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCTTGCCCCGGGAGCCTaGGGACCACAGGACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLELAPGA*GPQDQF Trigger: GAACTGGTCCTGTGGTCCTCAGGCTCCCGGGGCAAG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTCCGGTGGGCTCGTCTaGTTCTCTAGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRSGGLV*FSSIFT Trigger: AGTGAAGATGCTAGAGAAGCAGACGAGCCCACCGGA...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGCAGCTGCTTCTCCACTaGGCTTCGGATGGTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWQLLLH*ASDGGE Trigger: CTCCCCACCATCCGAAGCGCAGTGGAGAAGCAGCTG...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATCACAGTGGGAGCAGTaGAGGCGACTTGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSQWEQ*RRLGLA Trigger: GGCCAAGCCAAGTCGCCTGCACTGCTCCCACTGTGA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTCACAGTGGGAGCAGTaGAGGCGACTTGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSQWEQ*RRLGLA Trigger: GGCCAAGCCAAGTCGCCTGCACTGCTCCCACTGTGA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAATAGTGGGTAGCTCTTaGCCCGGGAGCCTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKIVGSS*PGSLRT Trigger: GGTCCTCAGGCTCCCGGGGCAAGAGCTACCCACTAT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCAGCCTCGCAGGTGTTaGAGGTGTCAGCAGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDQPRRC*RCQQIP Trigger: GGGTATCTGCTGACACCTGCAACACCTGCGAGGCTG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCTCGGGAGAGGATTTTaGCAATGGACTGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLLGRGF*QWTVPG Trigger: CCCTGGCACAGTCCATTGCCAAAATCCTCTCCCGAG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGCGCAGGTCTAGCTCCTaGCGGGCATCCACTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWRRSSS*RASTES Trigger: ACTCTCAGTGGATGCCCGCCAGGAGCTAGACCTGCG...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCGAGTCTGCCCAGTATaGGTGATTGGCCTGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDRVCPV*VIGLLS Trigger: CGACAGCAGGCCAATCACCCATACTGGGCAGACTCG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACGAGTCTGCCCAGTATaGGTGATTGGCCTGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGRVCPV*VIGLLS Trigger: CGACAGCAGGCCAATCACCCATACTGGGCAGACTCG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGCAGTGCAGGCGACTTaGCTTGGCCTGGATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLAVQAT*LGLDVL Trigger: AAGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACCACCTGCAGGAACTTaGCCATGTTCAGCTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGPPAGT*PCSAWG Trigger: ACCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACCCAGGGTAGGAGTCTaGCATGGCCCAAAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKPRVGV*HGPKEM Trigger: CATCTCCTTTGGGCCATGTCAGACTCCTACCCTGGG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCTGCTTATCTAAAAATGTGCAGTTCTCAATCCAAGGACTCCAGCTGACTTCCCATACCCAGAGCTaGGCTGGCCACACGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLCLSKNVQFSIQGLQLTSHTQS*AGHTQH Trigger: ATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGA...AGTCAGCTGGAGTCCTTGGATTGAGAACTGCACATTTTTAGATAAGCAGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTCCCATACCCAGAGCTaGGCTGGCCACACGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSHTQS*AGHTQH Trigger: ATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGATCTGCCCAGTATGGGTaGTTGGCCTGCTGTCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGSAQYG*LACCRK Trigger: TTTGCGACAGCAGGCCAATCACCCATACTGGGCAGA...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTCACTTCACCCACAGTaGAGGTATCACCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLSLHPQ*RYHPSG Trigger: GCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGCTATTTGCATGGCGTaGTGTGGTCCCATACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLAICMA*CGPIPR Trigger: TCTGGGTATGGGACCACAGCACGCCATGCAAATAGC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATCCAGGGGCACGCTCTaGCAAGGCATGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSRGTL*QGMISV Trigger: CACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTCCGGTGGGCTCGTCTaGTTCTCTAGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLSGGLV*FSSIFT Trigger: AGTGAAGATGCTAGAGAAGCAGACGAGCCCACCGGA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGCATACTCAGTGAGTaGTGGCAGGTGGGGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDSILSE*WQVGCV Trigger: CACACACCCCACCTGCCAGCACTCACTGAGTATGCT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTGTGCTGTGTCTCATTaGCAGGAAGGGGAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLCAVSH*QEGETW Trigger: CCAAGTCTCCCCTTCCTGGCAATGAGACACAGCACA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACTCGGGAGAGGATTTTaGCAATGGACTGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGLGRGF*QWTVPG Trigger: CCCTGGCACAGTCCATTGCCAAAATCCTCTCCCGAG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTCTCGGGATAGTGGGTaGTTTCTGTCCGTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDSRDSG*FLSVGS Trigger: GCTACCCACGGACAGAAACCACCCACTATCCCGAGA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACTGCGCTTCGGATGGTaGGGAGTACCAGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKLRFGW*GVPALH Trigger: ATGCAGAGCTGGTACTCCCCACCATCCGAAGCGCAG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAGCAGTGCAGGCGACTTaGCTTGGCCTGGATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGAVQAT*LGLDVL Trigger: AAGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGC...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATGCAGTGCAGGCGACTTaGCTTGGCCTGGATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDAVQAT*LGLDVL Trigger: AAGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGC...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGACTTGGGACCAGAAGTaGGGTCCAGAACAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLTWDQK*GPEQGL Trigger: GAGTCCTTGTTCTGGACCCCACTTCTGGTCCCAAGT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGATTCAGCCCTTTGTGTaGGGACATGTTTCCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLIQPFV*GHVSSG Trigger: TCCCGAGGAAACATGTCCTCACACAAAGGGCTGAAT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTGTGTACTTGTGCACTaGACATGCCCCATTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDCVLVH*TCPIQP Trigger: GGGCTGAATGGGGCATGTTCAGTGCACAAGTACACA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGACAGACGTCATCTTaGAGTGGACAGGTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDRQTSS*SGQVGQ Trigger: CTGGCCAACCTGTCCACTTCAAGATGACGTCTGTCT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCTGGCGGGCATCCACTaGGAGTGCCTCATTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLELAGIH*ECLIVV Trigger: GACCACAATGAGGCACTCTCAGTGGATGCCCGCCAG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCCAGTCCAGAAGGAGTaGCTCCTCTTTATCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRPVQKE*LLFICM Trigger: CATACAGATAAAGAGGAGTCACTCCTTCTGGACTGG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTCTGCCCAGTATGGGTaGTTGGCCTGCTGTCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSAQYG*LACCRK Trigger: TTTGCGACAGCAGGCCAATCACCCATACTGGGCAGA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGCTGGCAGATATTGTTaGTGTGCACAGGGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLAGRYC*CAQGYW Trigger: CCAGTATCCCTGTGCACATCAACAATATCTGCCAGC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATGTAAGCAGCCAGAGCTaGCATCTTGTCTTTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDVSSQS*HLVFWP Trigger: CGGCCAAAAGACAAGATGTCAGCTCTGGCTGCTTAC...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGCATAGTCACAGCCTCTaGCCTCCACCTGCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWHSHSL*PPPAGT Trigger: AGTTCCTGCAGGTGGAGGGCAGAGGCTGTGACTATG...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGAATCTCTCAGCTATTTaGATGGCGTGCTGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLNLSAI*MACCGP Trigger: GGGACCACAGCACGCCATGCAAATAGCTGAGAGATT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTCCGGTGGGCTCGTCTaGTTCTCTAGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDSGGLV*FSSIFT Trigger: AGTGAAGATGCTAGAGAAGCAGACGAGCCCACCGGA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGATAGTGGGTAGCTCTTaGCCCGGGAGCCTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEIVGSS*PGSLRT Trigger: GGTCCTCAGGCTCCCGGGGCAAGAGCTACCCACTAT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGGTGTGTGCACTCATTaGAGCCCATGCCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLGVCTH*SPCLSS Trigger: TGAAGAAAGGCATGGGCTGCAATGAGTGCACACACC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAAGCATACTCAGTGAGTaGTGGCAGGTGGGGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSILSE*WQVGCV Trigger: CACACACCCCACCTGCCAGCACTCACTGAGTATGCT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGAAGATGCAGCCTGTGTaGTGTGTCTCATTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLKMQPV*CVSLPG Trigger: TCCTGGCAATGAGACACAGCACACAGGCTGCATCTT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TACCCAGACCAGATAGGTTGGCTACAGCCTGAGCAATGGCACAAGTATTTCTTACTGAGGACACCCACATaGCACACTCACCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YPDQIGWLQPEQWHKYFLLRTPT*HTHLSS Trigger: TGAAGAAAGGTGAGTGTGGCATGTGGGTGTCCTCAG...TAAGAAATACTTGTGCCATTGCTCAGGCTGTAGCCAACCTATCTGGTCTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCGCTCAGGCGGGTCATaGCATTACAGATGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLRSGGS*HYRCLY Trigger: ATACAGACATCTGTAATGCCATGACCCGCCTGAGCG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTCTCGGGATAGTGGGTaGTTTCTGTCCGTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSRDSG*FLSVGS Trigger: GCTACCCACGGACAGAAACCACCCACTATCCCGAGA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTCAAAGTCATCCAATaGGCACCGCAGCTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRFKVIQ*APQLLV Trigger: TACAAGGAGCTGCGGTGCCCATTGGATGACTTTGAA...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCATGTCTCGGAAGGGTaGGTGGTTATAGCAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDHVSEG*VVIAVG Trigger: CCCTACTGCTATAACCACCCACCCTTCCGAGACATG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAATACTCAGTGAGTGCTaGCAGGTGGGGTGTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKILSEC*QVGCVH Trigger: GTGCACACACCCCACCTGCCAGCACTCACTGAGTAT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTGTGTACTTGTGCACTaGACATGCCCCATTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWCVLVH*TCPIQP Trigger: GGGCTGAATGGGGCATGTTCAGTGCACAAGTACACA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATCCAGTGTCATCACATaGCCGCAGACAGACGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSSVIT*PQTDVI Trigger: GATGACGTCTGTCTGCGGTCATGTGATGACACTGGA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAATGGCCCAAAGGAGATaGGAGAGCTGTCTAAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGMAQRR*ESCLNR Trigger: GCGATTTAGACAGCTCTCTCATCTCCTTTGGGCCAT...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCCCATACCCAGAGCTaGGCTGGCCACACGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESHTQS*AGHTQH Trigger: ATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTCACTTCACCCACAGTaGAGGTATCACCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWSLHPQ*RYHPSG Trigger: GCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAGCTGGCAGATATTGTTaGTGTGCACAGGGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGAGRYC*CAQGYW Trigger: CCAGTATCCCTGTGCACATCAACAATATCTGCCAGC...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTGCTTATCTAAAAATGTGCAGTTCTCAATCCAAGGACTCCAGCTGACTGCTCCTTGTAGAGCTTaGTGGTACCATTCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLCLSKNVQFSIQGLQLTAPCRA*WYHSGG Trigger: TCCCCCAGAATGGTACCATCAAGCTCTACAAGGAGC...AGTCAGCTGGAGTCCTTGGATTGAGAACTGCACATTTTTAGATAAGCAGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGTAAGCAGCCAGAGCTaGCATCTTGTCTTTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKVSSQS*HLVFWP Trigger: CGGCCAAAAGACAAGATGTCAGCTCTGGCTGCTTAC...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCAGGGATGGCTTTTCTaGTACCATGAGCACGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDQGWLF*YHEHGL Trigger: AAGACCGTGCTCATGGTAGCAGAAAAGCCATCCCTG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGATTTGGCAATGGACTGTaGCAGGGATGGCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGFGNGL*QGWLFC Trigger: GCAGAAAAGCCATCCCTGGCACAGTCCATTGCCAAA...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGAGAGCAAGTGGTCTCTaGTTGGCTTTTTCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRRASGL*LAFSFL Trigger: CAGGAAAGAAAAAGCCAAGCAGAGACCACTTGCTCT...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGCTATTTGCATGGCGTaGTGTGGTCCCATACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKAICMA*CGPIPR Trigger: TCTGGGTATGGGACCACAGCACGCCATGCAAATAGC...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGCTATTTGCATGGCGTaGTGTGGTCCCATACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWAICMA*CGPIPR Trigger: TCTGGGTATGGGACCACAGCACGCCATGCAAATAGC...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCCAGGGGCACGCTCTaGCAAGGCATGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESRGTL*QGMISV Trigger: CACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGACTCCCAAACCCTCGTTTGCTTCTGTAACTTATTAATGGCTCTTCCATCAGTCCCGATACCATaGTTCTCCATGAGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PADSQTLVCFCNLLMALPSVPIP*FSMRVM Trigger: CATCACTCTCATGGAGAAGCATGGTATCGGGACTGA...TGGAAGAGCCATTAATAAGTTACAGAAGCAAACGAGGGTTTGGGAGTCAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGACTCATTGCAGCCCATaGCTTTCTTCATGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLTHCSP*LSSCLG Trigger: TCCGAGACATGAAGAAAGGCATGGGCTGCAATGAGT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCAGCCTCGCAGGTGTTaGAGGTGTCAGCAGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEQPRRC*RCQQIP Trigger: GGGTATCTGCTGACACCTGCAACACCTGCGAGGCTG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTGTGCTGTGTCTCATTaGCAGGAAGGGGAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWCAVSH*QEGETW Trigger: CCAAGTCTCCCCTTCCTGGCAATGAGACACAGCACA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGAGGATTTTGGCAATaGACTGTGCCAGGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDRGFWQ*TVPGMA Trigger: AGCCATCCCTGGCACAGTCCATTGCCAAAATCCTCT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATGACGTCATCTTGAAGTaGACAGGTTGGCCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDDVILK*TGWPAK Trigger: CTTTGCTGGCCAACCTGTCCACTTCAAGATGACGTC...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTCCTTTTTCTCTGTTaGAGCTTGGCTGAAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRFLFLC*SLAEEL Trigger: GAGCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAA...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACGCTCAGGCGGGTCATaGCATTACAGATGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGRSGGS*HYRCLY Trigger: ATACAGACATCTGTAATGCCATGACCCGCCTGAGCG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGAAGGAGATAGTGCTCTaGAGATACTTGCAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRKEIVL*RYLQSW Trigger: CCATGACTGCAAGTATCTCCAGAGCACTATCTCCTT...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCTGCGCTTCGGATGGTaGGGAGTACCAGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLELRFGW*GVPALH Trigger: ATGCAGAGCTGGTACTCCCCACCATCCGAAGCGCAG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTTCAAAGTCATCCAATaGGCACCGCAGCTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLFKVIQ*APQLLV Trigger: TACAAGGAGCTGCGGTGCCCATTGGATGACTTTGAA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGCATGTCTCGGAAGGGTaGGTGGTTATAGCAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWHVSEG*VVIAVG Trigger: CCCTACTGCTATAACCACCCACCCTTCCGAGACATG...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTGTGGGCATTATTCATaGCAGGCAGAACGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDCGHYS*QAERHQ Trigger: TTGATGCCGTTCTGCCTGTCATGAATAATGCCCACA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCTGCCCAGTATGGGTaGTTGGCCTGCTGTCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESAQYG*LACCRK Trigger: TTTGCGACAGCAGGCCAATCACCCATACTGGGCAGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTGCTTATCTAAAAATGTGCAGTTCTCAATCCAAGGACTCCAGCTGACTGCTGGCAGATATTGTTaGTGTGCACAGGGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLCLSKNVQFSIQGLQLTAGRYC*CAQGYW Trigger: CCAGTATCCCTGTGCACATCAACAATATCTGCCAGC...AGTCAGCTGGAGTCCTTGGATTGAGAACTGCACATTTTTAGATAAGCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACAGGGATGGCTTTTCTaGTACCATGAGCACGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKQGWLF*YHEHGL Trigger: AAGACCGTGCTCATGGTAGCAGAAAAGCCATCCCTG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATGTTCCTGTGTACTTGTaGACTGAACATGCCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDVPVYL*TEHAPF Trigger: GAATGGGGCATGTTCAGTGCACAAGTACACAGGAAC...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCATAGTCACAGCCTCTaGCCTCCACCTGCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEHSHSL*PPPAGT Trigger: AGTTCCTGCAGGTGGAGGGCAGAGGCTGTGACTATG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGAGAGCAAGTGGTCTCTaGTTGGCTTTTTCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLRASGL*LAFSFL Trigger: CAGGAAAGAAAAAGCCAAGCAGAGACCACTTGCTCT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAAATCTCTCAGCTATTTaGATGGCGTGCTGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKNLSAI*MACCGP Trigger: GGGACCACAGCACGCCATGCAAATAGCTGAGAGATT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTCAGTCCCGATACCATaGTTCTCCATGAGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDSVPIP*FSMRVM Trigger: CATCACTCTCATGGAGAAGCATGGTATCGGGACTGA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGTGTGTGCACTCATTaGAGCCCATGCCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWGVCTH*SPCLSS Trigger: TGAAGAAAGGCATGGGCTGCAATGAGTGCACACACC...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGAAGATGCAGCCTGTGTaGTGTGTCTCATTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWKMQPV*CVSLPG Trigger: TCCTGGCAATGAGACACAGCACACAGGCTGCATCTT...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCGGGGTCACAGAAGATaGAGCCTGTGTGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLERGHRR*SLCAVS Trigger: AGACACAGCACACAGGCTGCATCTTCTGTGACCCCG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCACCCAGTAGGTCTCTaGCTTGAAGGACTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDHPVGL*LEGLDF Trigger: AAAATCCAGTCCTTCAAGCCAGAGACCTACTGGGTG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATCTCAGCTATTTGCATaGCGTGCTGTGGTCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKSQLFA*RAVVPY Trigger: GTATGGGACCACAGCACGCCATGCAAATAGCTGAGA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTTCAAAGTCATCCAATaGGCACCGCAGCTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDFKVIQ*APQLLV Trigger: TACAAGGAGCTGCGGTGCCCATTGGATGACTTTGAA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGATACTCAGTGAGTGCTaGCAGGTGGGGTGTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEILSEC*QVGCVH Trigger: GTGCACACACCCCACCTGCCAGCACTCACTGAGTAT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATGTGGGCATTATTCATaGCAGGCAGAACGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKCGHYS*QAERHQ Trigger: TTGATGCCGTTCTGCCTGTCATGAATAATGCCCACA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACCAGTCCAGAAGGAGTaGCTCCTCTTTATCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKPVQKE*LLFICM Trigger: CATACAGATAAAGAGGAGTCACTCCTTCTGGACTGG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGGCTCCTTGTAGAGCTTaGTGGTACCATTCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEAPCRA*WYHSGG Trigger: TCCCCCAGAATGGTACCATCAAGCTCTACAAGGAGC...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGGGGAGTACCAGCTCTaGATCAATCTTGTAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKGEYQL*INLVVT Trigger: GGTTACTACAAGATTGATGCAGAGCTGGTACTCCCC...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACACCCAGTAGGTCTCTaGCTTGAAGGACTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKHPVGL*LEGLDF Trigger: AAAATCCAGTCCTTCAAGCCAGAGACCTACTGGGTG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAGTGTTCAGAGCAAGTaGTCTCTGCTTGGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGSVQSK*SLLGFF Trigger: GAAAAAGCCAAGCAGAGACCACTTGCTCTGAACACT...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAGGAGATAGTGCTCTaGAGATACTTGCAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGKEIVL*RYLQSW Trigger: CCATGACTGCAAGTATCTCCAGAGCACTATCTCCTT...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAAGGAGATAGTGCTCTaGAGATACTTGCAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDKEIVL*RYLQSW Trigger: CCATGACTGCAAGTATCTCCAGAGCACTATCTCCTT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGGATCTCTGTGAAGCCTaGAGAAATAACTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSGSKITTMCLEWGKDRDLCEA*RNNCFS Trigger: GGAAAAACAGTTATTTCTCCAGGCTTCACAGAGATC...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTACTTCATAAATCGATaGCACTTCCCACAGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDYFINR*HFPQRE Trigger: CTCACGCTGTGGGAAGTGCCATCGATTTATGAAGTA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGATACTTCATAAATCGATaGCACTTCCCACAGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGYFINR*HFPQRE Trigger: CTCACGCTGTGGGAAGTGCCATCGATTTATGAAGTA...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGATGGCCCAAAGGAGATaGGAGAGCTGTCTAAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEMAQRR*ESCLNR Trigger: GCGATTTAGACAGCTCTCTCATCTCCTTTGGGCCAT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTTTGGCAATGGACTGTaGCAGGGATGGCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEFGNGL*QGWLFC Trigger: GCAGAAAAGCCATCCCTGGCACAGTCCATTGCCAAA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGAATCTCTCAGCTATTTaGATGGCGTGCTGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLENLSAI*MACCGP Trigger: GGGACCACAGCACGCCATGCAAATAGCTGAGAGATT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCAGATATTGTTGATGTaGACAGGGATACTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDQILLM*TGILAS Trigger: TGATGCCAGTATCCCTGTGCACATCAACAATATCTG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR GCA 90 bp | CAAACCCTCGTTTGCTTCTGTAACTTATTAATGGCTCTTCCAGGTTGCTCTCAGCAGATATTGTTGATGTaGACAGGGATACTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLVCFCNLLMALPGCSQQILLM*TGILAS Trigger: TGATGCCAGTATCCCTGTGCACATCAACAATATCTG...CTGAGAGCAACCTGGAAGAGCCATTAATAAGTTACAGAAGCAAACGAGGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR GCA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACAGATATTGTTGATGTaGACAGGGATACTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HFNGFSGSKITTMCLEWGQILLM*TGILAS Trigger: TGATGCCAGTATCCCTGTGCACATCAACAATATCTG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGCTTATCTAAAAATGTGCAGTTCTCAATCCAAGGACTCCAGCTGACTAGTGTTCAGAGCAAGTaGTCTCTGCTTGGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCLSKNVQFSIQGLQLTSVQSK*SLLGFF Trigger: GAAAAAGCCAAGCAGAGACCACTTGCTCTGAACACT...AGTCAGCTGGAGTCCTTGGATTGAGAACTGCACATTTTTAGATAAGCAGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCTCAGCTATTTGCATaGCGTGCTGTGGTCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESQLFA*RAVVPY Trigger: GTATGGGACCACAGCACGCCATGCAAATAGCTGAGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGATCTCTGTGAAGCCTaGAGAAATAACTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSKITTMCLEWGKDRLDLCEA*RNNCFS Trigger: GGAAAAACAGTTATTTCTCCAGGCTTCACAGAGATC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGTACTTCATAAATCGATaGCACTTCCCACAGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWYFINR*HFPQRE Trigger: CTCACGCTGTGGGAAGTGCCATCGATTTATGAAGTA...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCAGTCCCGATACCATaGTTCTCCATGAGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESVPIP*FSMRVM Trigger: CATCACTCTCATGGAGAAGCATGGTATCGGGACTGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGGGGGAGTACCAGCTCTaGATCAATCTTGTAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLEGEYQL*INLVVT Trigger: GGTTACTACAAGATTGATGCAGAGCTGGTACTCCCC...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTGGAAATACTTTGTTTaGAACCTAGTGAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFSGSKITTMCLEWGKDWKYFV*NLVNAQ Trigger: CTGTGCATTCACTAGGTTTCAAACAAAGTATTTCCA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGAGAGCAAGTGGTCTCTaGTTGGCTTTTTCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLERASGL*LAFSFL Trigger: CAGGAAAGAAAAAGCCAAGCAGAGACCACTTGCTCT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGAGTGTTCAGAGCAAGTaGTCTCTGCTTGGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKHFNGFSGSKITTMCLESVQSK*SLLGFF Trigger: GAAAAAGCCAAGCAGAGACCACTTGCTCTGAACACT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CCA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGATCTCTGTGAAGCCTaGAGAAATAACTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHFNGFSGSKITTMCLEWDLCEA*RNNCFS Trigger: GGAAAAACAGTTATTTCTCCAGGCTTCACAGAGATC...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR TCA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAATGGAAATACTTTGTTTaGAACCTAGTGAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FNGFSGSKITTMCLEWGKWKYFV*NLVNAQ Trigger: CTGTGCATTCACTAGGTTTCAAACAAAGTATTTCCA...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTACTACCTGGGAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCCAAGGTTGGTGGGCTaGAGTCGGCGGCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTWERVHVLAVSLSGSRPRLVG*SRRPLS Trigger: GGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTGG...CCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTCCCAGGTAGTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS-3UTR CAA 90 bp | GAGCGGGTACATGTGCTGGCAGTGAGCCTCTCTGGTTCCAGGCTTGGCATGCACAGAACTATGCCAAGGTaGGTGGGCTTGAGTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ERVHVLAVSLSGSRLGMHRTMPR*VGLSRR Trigger: CCGCCGACTCAAGCCCACCAACCTTGGCATAGTTCT...GTGCATGCCAAGCCTGGAACCAGAGAGGCTCACTGCCAGCACATGTACCCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS CCA 90 bp | CGCAGGTCTAGCTCCTGGCGGGCATCCACTGAGAGTGCCTCATTGTaGTCTGGCTCGCTCAGGCGGGTCATGGCATTACAGATGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSWRASTESASL*SGSLRRVMALQMSV Trigger: TACAGACATCTGTAATGCCATGACCCGCCTGAGCGAGCCAGACCACAATGAGGCACTCTCAGTGGATGCCCGCCAGGAGCTAGACCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | CCGGTGGGCTCGTCTGCTTCTCTAGCATCTTCACTTCACCCACAGTaGAGGTATCACCCTTCTGGCACGTGGGCAGACTCTCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVGSSASLASSLHPQ*RYHPSGTWADSLPG Trigger: CCCTGGAAGAGAGTCTGCCCACGTGCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGAAGATGCTAGAGAAGCAGACGAGCCCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | TTCTCTAGCATCTTCACTTCACCCACAGTGAAGGTATCACCCTTCTaGCACGTGGGCAGACTCTCTTCCAGGGGCACGCTCTGCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSIFTSPTVKVSPF*HVGRLSSRGTLCQG Trigger: GCCTTGGCAGAGCGTGCCCCTGGAAGAGAGTCTGCCCACGTGCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGAAGATGCTAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | CAGCTATTTGCATGGCGTGCTGTGGTCCCATACCCAGAGCTGAGCTaGCCACACGCAACATCTCCACAGTGTTCAGAGCAAGTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLFAWRAVVPYPELS*PHATSPQCSEQVVS Trigger: AGAGACCACTTGCTCTGAACACTGTGGAGATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGACCACAGCACGCCATGCAAATAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCAGCGTGAGAGGGGCTaGCCAGTGGCAGCCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLQRERG*PVAARG Trigger: ACCCCTGGCTGCCACTGGCAAGCCCCTCTCACGCTG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | CCAGTTCAAAGTCATCCAATGGGCACCGCAGCTCCTTGTAGAGCTTaGTGGTACCATTCTGGGGGAGGGTGTAGGTCTCATCACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVQSHPMGTAAPCRA*WYHSGGGCRSHHSG Trigger: CCCACTGTGATGAGACCTACACCCTCCCCCAGAATGGTACCATCAAGCTCTACAAGGAGCTGCGGTGCCCATTGGATGACTTTGAACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000231966.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | ATGCCTTCCGCTAACAACTGCTTTACCGAGTCTGCCCAGTATGGGTaGTTGGCCTGCTGTCGCAAAGAGCCCTTCAGGTCAAAGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: MPSANNCFTESAQYG*LACCRKEPFRSKFS Trigger: CGAGAACTTTGACCTGAAGGGCTCTTTGCGACAGCAGGCCAATCACCCATACTGGGCAGACTCGGTAAAGCAGTTGTTAGCGGAAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 90 bp | TCACCCTTCTGGCACGTGGGCAGACTCTCTTCCAGGGGCACGCTCTaGCAAGGCATGATCTCTGTGAAGCCTGGAGAAATAACTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPFWHVGRLSSRGTL*QGMISVKPGEITVF Trigger: AAAAACAGTTATTTCTCCAGGCTTCACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGAAGAGAGTCTGCCCACGTGCCAGAAGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | CTTCCGCTAACAACTGCTTTACCGAGTCTGCCCAGTATGGGTGATTaGCCTGCTGTCGCAAAGAGCCCTTCAGGTCAAAGTTCTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLTTALPSLPSMGD*PAVAKSPSGQSSRD Trigger: ATCCCGAGAACTTTGACCTGAAGGGCTCTTTGCGACAGCAGGCCAATCACCCATACTGGGCAGACTCGGTAAAGCAGTTGTTAGCGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGACCAAGGTTGGTGGGCTaGAGTCGGCGGCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HFNGFSGSKITTMCLEWGPRLVG*SRRPLS Trigger: GGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTGG...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | GTAGCCGACTTCATAGGTGTGATTGGAGGATGGTCACCAGCATCATaGCCTTTCCGAGGGCGGTTGATGCCTTCCGCTAACAACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VADFIGVIGGWSPAS*PFRGRLMPSANNCF Trigger: AAAGCAGTTGTTAGCGGAAGGCATCAACCGCCCTCGGAAAGGTCATGATGCTGGTGACCATCCTCCAATCACACCTATGAAGTCGGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 90 bp | CAGCTGCTTCTCCACTGCGCTTCGGATGGTGGGGAGTACCAGCTCTaGATCAATCTTGTAGTAACCATGCACCAGAACTATGCCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLHCASDGGEYQL*INLVVTMHQNYAKV Trigger: AACCTTGGCATAGTTCTGGTGCATGGTTACTACAAGATTGATGCAGAGCTGGTACTCCCCACCATCCGAAGCGCAGTGGAGAAGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACCAAGGTTGGTGGGCTaGAGTCGGCGGCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FNGFSGSKITTMCLEWGKPRLVG*SRRPLS Trigger: GGAGAGTGGCCGCCGACTCAAGCCCACCAACCTTGG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGAGAACTATGCCAAGGTaGGTGGGCTTGAGTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRRTMPR*VGLSRR Trigger: CCGCCGACTCAAGCCCACCAACCTTGGCATAGTTCT...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGAGCAGTGCAGGCGACTaGGCTTGGCCTGGATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRSSAGD*AWPGCT Trigger: AGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGCT...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 90 bp | GGACCTCACTGGAGTATGCTAAGTATGAACCTGAGGACACCCACATaGCACACTCACCTTTCTTCATGTCTCGGAAGGGTGGGTGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GPHWSMLSMNLRTPT*HTHLSSCLGRVGGY Trigger: ATAACCACCCACCCTTCCGAGACATGAAGAAAGGTGAGTGTGGCATGTGGGTGTCCTCAGGTTCATACTTAGCATACTCCAGTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS CCA 90 bp | CTCTTCCAGGGGCACGCTCTGCCAAGGCATGATCTCTGTGAAGCCTaGAGAAATAACTGTTTTTCCCATGCATGTAAAGTGTTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFQGHALPRHDLCEA*RNNCFSHACKVFRP Trigger: GGGCCTGAACACTTTACATGCATGGGAAAAACAGTTATTTCTCCAGGCTTCACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGCAGCGTGAGAGGGGCTaGCCAGTGGCAGCCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KKHFNGFSGSKITTMCLEQRERG*PVAARG Trigger: ACCCCTGGCTGCCACTGGCAAGCCCCTCTCACGCTG...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGAGCAGTGCAGGCGACTaGGCTTGGCCTGGATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLSSAGD*AWPGCT Trigger: AGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGCT...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCAGTGTGCCACCACATaGCATGTATTGCAGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRQCATT*HVLQAT Trigger: GGTGGCCTGCAATACATGCAATGTGGTGGCACACTG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGATTTGGCCGCCTAGGGTaGGGCTTTCCTGGAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFNGFSGSKITTMCLEWGFGRLG*GFPGGL Trigger: GAGACCTCCAGGAAAGCCCAACCCTAGGCGGCCAAA...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGCCAGAGCTGACATCTaGTCTTTTGGCCGCCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLARADI*SFGRLG Trigger: CCCTAGGCGGCCAAAAGACAAGATGTCAGCTCTGGC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | GTGATGGAGCTGAACCTGGCACGAAACACTGTCTTCTCACCATTGTaGGCATTATTCATGACAGGCAGAACGGCATCAAGGACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMELNLARNTVFSPL*ALFMTGRTASRTSK Trigger: CTTTGAGGTCCTTGATGCCGTTCTGCCTGTCATGAATAATGCCCACAATGGTGAGAAGACAGTGTTTCGTGCCAGGTTCAGCTCCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGCTTGAAGTGGACAGGTaGGCCAGCAAAGGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRLEVDR*ASKGSC Trigger: ACAGGAACCTTTGCTGGCCAACCTGTCCACTTCAAG...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGGTGCTCTGGAGATACTaGCAGTCATGGCTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRVLWRY*QSWLTV Trigger: CACAGTGAGCCATGACTGCAAGTATCTCCAGAGCAC...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAGAACTATGCCAAGGTaGGTGGGCTTGAGTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HFNGFSGSKITTMCLEWGRTMPR*VGLSRR Trigger: CCGCCGACTCAAGCCCACCAACCTTGGCATAGTTCT...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTGCAGGCGACTTGGCTaGGCCTGGATGTACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GFSGSKITTMCLEWGKDRCRRLG*AWMYFI Trigger: TATGAAGTACATCCAGGCCAAGCCAAGTCGCCTGCA...CCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCAGTGTGCCACCACATaGCATGTATTGCAGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLQCATT*HVLQAT Trigger: GGTGGCCTGCAATACATGCAATGTGGTGGCACACTG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | AAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGCAGCCTCGCAGGTGTaGCAGGTGTCAGCAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: KHFNGFSGSKITTMCLEWAASQV*QVSADT Trigger: GGTATCTGCTGACACCTGCAACACCTGCGAGGCTGC...CCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | TTATCCCACTTGTTGTACTTCCCCAGAAAATCCAGTGTCATCACATaGCCGCAGACAGACGTCATCTTGAAGTGGACAGGTTGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSHLLYFPRKSSVIT*PQTDVILKWTGWPA Trigger: TGCTGGCCAACCTGTCCACTTCAAGATGACGTCTGTCTGCGGTCATGTGATGACACTGGATTTTCTGGGGAAGTACAACAAGTGGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | AATCTCCCAGTCGAAAACTCTAACACGGTCCCAGTCCAGAAGGAGTaGCTCCTCTTTATCTGTATGAACCTTGGCCTGAAGCACCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NLPVENSNTVPVQKE*LLFICMNLGLKHPV Trigger: TACTGGGTGCTTCAGGCCAAGGTTCATACAGATAAAGAGGAGTCACTCCTTCTGGACTGGGACCGTGTTAGAGTTTTCGACTGGGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232080.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS TCA 90 bp | GGTCAAAGTTCTCGGGATAGTGGGTGGTTTCTGTCCGTGGGTAGCTaGTATAGCCCTGTGTGTATAATCTCTCAGCTATTTGCATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GQSSRDSGWFLSVGS*YSPVCIISQLFAWR Trigger: ACGCCATGCAAATAGCTGAGAGATTATACACACAGGGCTATATCAGCTACCCACGGACAGAAACCACCCACTATCCCGAGAACTTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 90 bp | ATCTTGAAGTGGACAGGTTGGCCAGCAAAGGTTCCTGTGTACTTGTaGACTGAACATGCCCCATTCAGCCCTTTGTGTGAGGACATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILKWTGWPAKVPVYL*TEHAPFSPLCEDMF Trigger: AAACATGTCCTCACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACACAGGAACCTTTGCTGGCCAACCTGTCCACTTCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | ACCATGTTCAGCTTGGGGTTAGCTTCCTTTTTCTCTGTTGGAGCTTaGCTGAAGAGCTCTGCAGGATCCACCTTATCCCACTTGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TMFSLGLASFFSVGA*LKSSAGSTLSHLLY Trigger: GTACAACAAGTGGGATAAGGTGGATCCTGCAGAGCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCTGAACATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | GAACTTGACCATGTTCAGCTTGGGGTTAGCTTCCTTTTTCTCTGTTaGAGCTTGGCTGAAGAGCTCTGCAGGATCCACCTTATCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ELDHVQLGVSFLFLC*SLAEELCRIHLIPL Trigger: AAGTGGGATAAGGTGGATCCTGCAGAGCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCTGAACATGGTCAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CCA 90 bp | ATGCATGTAAAGTGTTCAGGCCCGATCCTGAAGGAGATAGTGCTCTaGAGATACTTGCAGTCATGGCTCACTGTGGCAATGAAGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MHVKCSGPILKEIVL*RYLQSWLTVAMKCL Trigger: CAGACACTTCATTGCCACAGTGAGCCATGACTGCAAGTATCTCCAGAGCACTATCTCCTTCAGGATCGGGCCTGAACACTTTACATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGCCCCATTCAGCCCTTaGTGTGAGGACATGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLAPFSP*CEDMFP Trigger: AGGAAACATGTCCTCACACAAAGGGCTGAATGGGGC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGCTTGAAGTGGACAGGTaGGCCAGCAAAGGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLLEVDR*ASKGSC Trigger: ACAGGAACCTTTGCTGGCCAACCTGTCCACTTCAAG...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTCCACCTGCAGGAACTaGACCATGTTCAGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDSTCRN*TMFSLG Trigger: CCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGGA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGACTCCCAAACCCTCGTTTGCTTCTGTAACTTATTAATGGCTCTTCCAGTGCTCTGGAGATACTaGCAGTCATGGCTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PADSQTLVCFCNLLMALPVLWRY*QSWLTV Trigger: CACAGTGAGCCATGACTGCAAGTATCTCCAGAGCAC...TGGAAGAGCCATTAATAAGTTACAGAAGCAAACGAGGGTTTGGGAGTCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGGTGCTCTGGAGATACTaGCAGTCATGGCTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLVLWRY*QSWLTV Trigger: CACAGTGAGCCATGACTGCAAGTATCTCCAGAGCAC...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTGCAGGCGACTTGGCTaGGCCTGGATGTACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLCRRLG*AWMYFI Trigger: TATGAAGTACATCCAGGCCAAGCCAAGTCGCCTGCA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCAGACAGACGTCATCTaGAAGTGGACAGGTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDQTDVI*KWTGWP Trigger: TGGCCAACCTGTCCACTTCAAGATGACGTCTGTCTG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTGCAGGCGACTTGGCTaGGCCTGGATGTACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDCRRLG*AWMYFI Trigger: TATGAAGTACATCCAGGCCAAGCCAAGTCGCCTGCA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGGCAGCCTCGCAGGTGTaGCAGGTGTCAGCAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: KKHFNGFSGSKITTMCLEAASQV*QVSADT Trigger: GGTATCTGCTGACACCTGCAACACCTGCGAGGCTGC...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS TCA 90 bp | TATCTGTATGAACCTTGGCCTGAAGCACCCAGTAGGTCTCTGGCTTaGAGGACTGGATTTTATCATGTCTTTCTACACAGAATCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLYEPWPEAPSRSLA*RTGFYHVFLHRIPG Trigger: CCCTGGGATTCTGTGTAGAAAGACATGATAAAATCCAGTCCTTCAAGCCAGAGACCTACTGGGTGCTTCAGGCCAAGGTTCATACAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232080.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGCCCCATTCAGCCCTTaGTGTGAGGACATGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FNGFSGSKITTMCLEWGKAPFSP*CEDMFP Trigger: AGGAAACATGTCCTCACACAAAGGGCTGAATGGGGC...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGAGCAGTGCAGGCGACTaGGCTTGGCCTGGATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: KKHFNGFSGSKITTMCLESSAGD*AWPGCT Trigger: AGTACATCCAGGCCAAGCCAAGTCGCCTGCACTGCT...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGGCCAGAGCTGACATCTaGTCTTTTGGCCGCCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKHFNGFSGSKITTMCLEARADI*SFGRLG Trigger: CCCTAGGCGGCCAAAAGACAAGATGTCAGCTCTGGC...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATAGGTTGTTGACCATGTTCAGCTaGGGGTTAGCTTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSGSKITTMCLEWGKDRLLTMFS*GLASFF Trigger: GAAAAAGGAAGCTAACCCCAAGCTGAACATGGTCAA...CAACCTATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTCCACCTGCAGGAACTaGACCATGTTCAGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKHFNGFSGSKITTMCLESTCRN*TMFSLG Trigger: CCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGGA...CTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGATTGCGCTGGCAGATATaGTTGATGTGCACAGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HFNGFSGSKITTMCLEWGLRWQI*LMCTGI Trigger: TATCCCTGTGCACATCAACAATATCTGCCAGCGCAA...TCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTTGCGCTGGCAGATATaGTTGATGTGCACAGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDLRWQI*LMCTGI Trigger: TATCCCTGTGCACATCAACAATATCTGCCAGCGCAA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS TCA 90 bp | TGGATTTTATCATGTCTTTCTACACAGAATCCCAGGGTAGGAGTCTaGCATGGCCCAAAGGAGATGAGAGAGCTGTCTAAATCGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: WILSCLSTQNPRVGV*HGPKEMRELSKSPY Trigger: ATATGGCGATTTAGACAGCTCTCTCATCTCCTTTGGGCCATGTCAGACTCCTACCCTGGGATTCTGTGTAGAAAGACATGATAAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
||
| CDS CCA 90 bp | CTCTTTATCTGTATGAACCTTGGCCTGAAGCACCCAGTAGGTCTCTaGCTTGAAGGACTGGATTTTATCATGTCTTTCTACACAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LFICMNLGLKHPVGL*LEGLDFIMSFYTES Trigger: GGATTCTGTGTAGAAAGACATGATAAAATCCAGTCCTTCAAGCCAGAGACCTACTGGGTGCTTCAGGCCAAGGTTCATACAGATAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232080.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATACCTTATCCCACTTGTaGTACTTCCCCAGAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDTLSHL*YFPRKS Trigger: GGATTTTCTGGGGAAGTACAACAAGTGGGATAAGGT...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATTTGACCATGTTCAGCTaGGGGTTAGCTTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDLTMFS*GLASFF Trigger: GAAAAAGGAAGCTAACCCCAAGCTGAACATGGTCAA...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAACCTTATCCCACTTGTaGTACTTCCCCAGAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: FNGFSGSKITTMCLEWGKTLSHL*YFPRKS Trigger: GGATTTTCTGGGGAAGTACAACAAGTGGGATAAGGT...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAAGATCTGGAAATACTTTGTTaGAAACCTAGTGAATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NGFSGSKITTMCLEWGKDLEILC*KPSECT Trigger: TGTGCATTCACTAGGTTTCAAACAAAGTATTTCCAG...ATCTTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGGTTTCAGTGGCTCAAAGATAACCACGATGTGTCTGGAGTGGGGAAAACTGGAAATACTTTGTTaGAAACCTAGTGAATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNGFSGSKITTMCLEWGKLEILC*KPSECT Trigger: TGTGCATTCACTAGGTTTCAAACAAAGTATTTCCAG...TTTTCCCCACTCCAGACACATCGTGGTTATCTTTGAGCCACTGAAACCATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023465.16 ENSMUST00000232581.2 |
||
| CDS CCA 72 bp | AGCTCCTGGCGGGCATCCACTGAGAGTGCCTCATTGTaGTCTGGCTCGCTCAGGCGGGTCATGGCATTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSWRASTESASL*SGSLRRVMALQ Trigger: CTGTAATGCCATGACCCGCCTGAGCGAGCCAGACCACAATGAGGCACTCTCAGTGGATGCCCGCCAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
||
| CDS CAA 72 bp | TCTAGCTCCTGGCGGGCATCCACTGAGAGTGCCTCATaGTGGTCTGGCTCGCTCAGGCGGGTCATGGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSWRASTESAS*WSGSLRRVMAL Trigger: TAATGCCATGACCCGCCTGAGCGAGCCAGACCACAATGAGGCACTCTCAGTGGATGCCCGCCAGGAGCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
||
| CDS CAA 90 bp | ATGCGCAGGTCTAGCTCCTGGCGGGCATCCACTGAGAGTGCCTCATaGTGGTCTGGCTCGCTCAGGCGGGTCATGGCATTACAGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MRRSSSWRASTESAS*WSGSLRRVMALQMS Trigger: AGACATCTGTAATGCCATGACCCGCCTGAGCGAGCCAGACCACAATGAGGCACTCTCAGTGGATGCCCGCCAGGAGCTAGACCTGCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
||
| CDS CCA 72 bp | CTAGTGAATGCACAGCCGATGCGCAGGTCTAGCTCCTaGCGGGCATCCACTGAGAGTGCCTCATTGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVNAQPMRRSSS*RASTESASLWS Trigger: AGACCACAATGAGGCACTCTCAGTGGATGCCCGCCAGGAGCTAGACCTGCGCATCGGCTGTGCATTCACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
||
| CDS CCA 72 bp | GCATGGCGTGCTGTGGTCCCATACCCAGAGCTGAGCTaGCCACACGCAACATCTCCACAGTGTTCAGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AWRAVVPYPELS*PHATSPQCSEQ Trigger: TTGCTCTGAACACTGTGGAGATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGACCACAGCACGCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS GCA 72 bp | TGGCACGTGGGCAGACTCTCTTCCAGGGGCACGCTCTaGCAAGGCATGATCTCTGTGAAGCCTGGAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: WHVGRLSSRGTL*QGMISVKPGEI Trigger: TATTTCTCCAGGCTTCACAGAGATCATGCCTTGGCAGAGCGTGCCCCTGGAAGAGAGTCTGCCCACGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS CCA 72 bp | ATCTTCACTTCACCCACAGTGAAGGTATCACCCTTCTaGCACGTGGGCAGACTCTCTTCCAGGGGCACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IFTSPTVKVSPF*HVGRLSSRGTL Trigger: GAGCGTGCCCCTGGAAGAGAGTCTGCCCACGTGCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS TCA 72 bp | TATTTGCATGGCGTGCTGTGGTCCCATACCCAGAGCTaGGCTGGCCACACGCAACATCTCCACAGTGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLHGVLWSHTQS*AGHTQHLHSVQ Trigger: CTGAACACTGTGGAGATGTTGCGTGTGGCCAGCTCAGCTCTGGGTATGGGACCACAGCACGCCATGCAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS TCA 72 bp | GCTAACAACTGCTTTACCGAGTCTGCCCAGTATGGGTaGTTGGCCTGCTGTCGCAAAGAGCCCTTCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ANNCFTESAQYG*LACCRKEPFRS Trigger: TGACCTGAAGGGCTCTTTGCGACAGCAGGCCAATCACCCATACTGGGCAGACTCGGTAAAGCAGTTGTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS GCA 72 bp | CCCTGTGTGTATAATCTCTCAGCTATTTGCATGGCGTaGTGTGGTCCCATACCCAGAGCTGAGCTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PCVYNLSAICMA*CGPIPRAELAT Trigger: TGTGGCCAGCTCAGCTCTGGGTATGGGACCACAGCACGCCATGCAAATAGCTGAGAGATTATACACACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS CAA 90 bp | TCACAGCCTCTGCCCTCCACCTGCAGGAACTTGACCATGTTCAGCTaGGGGTTAGCTTCCTTTTTCTCTGTTGGAGCTTGGCTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQPLPSTCRNLTMFS*GLASFFSVGAWLKS Trigger: GCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGGAGGGCAGAGGCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
||
| CDS TCA 72 bp | CCAGTGTCATCACATGACCGCAGACAGACGTCATCTTaGAGTGGACAGGTTGGCCAGCAAAGGTTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PVSSHDRRQTSS*SGQVGQQRFLC Trigger: ACACAGGAACCTTTGCTGGCCAACCTGTCCACTTCAAGATGACGTCTGTCTGCGGTCATGTGATGACACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
||
| CDS TCA 72 bp | TTCATAGGTGTGATTGGAGGATGGTCACCAGCATCATaGCCTTTCCGAGGGCGGTTGATGCCTTCCGCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: FIGVIGGWSPAS*PFRGRLMPSAN Trigger: GTTAGCGGAAGGCATCAACCGCCCTCGGAAAGGTCATGATGCTGGTGACCATCCTCCAATCACACCTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS TCA 72 bp | TCGTCTGCTTCTCTAGCATCTTCACTTCACCCACAGTaGAGGTATCACCCTTCTGGCACGTGGGCAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSASLASSLHPQ*RYHPSGTWADS Trigger: AGAGTCTGCCCACGTGCCAGAAGGGTGATACCTTCACTGTGGGTGAAGTGAAGATGCTAGAGAAGCAGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS GCA 72 bp | CATGTTTCCTCGGGAGAGGATTTTGGCAATGGACTGTaGCAGGGATGGCTTTTCTGCTACCATGAGCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: HVSSGEDFGNGL*QGWLFCYHEHG Trigger: ACCGTGCTCATGGTAGCAGAAAAGCCATCCCTGGCACAGTCCATTGCCAAAATCCTCTCCCGAGGAAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232547.2 ENSMUST00000232581.2 |
||
| CDS GCA 72 bp | TGGACAGGTTGGCCAGCAAAGGTTCCTGTGTACTTGTaGACTGAACATGCCCCATTCAGCCCTTTGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WTGWPAKVPVYL*TEHAPFSPLCE Trigger: CTCACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACACAGGAACCTTTGCTGGCCAACCTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
||
| CDS GCA 72 bp | ATGTGCACAGGGATACTGGCATCAGTCCCGATACCATaGTTCTCCATGAGAGTGATGAGCTCAGCCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MCTGILASVPIP*FSMRVMSSASV Trigger: GACTGAGGCTGAGCTCATCACTCTCATGGAGAAGCATGGTATCGGGACTGATGCCAGTATCCCTGTGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS CCA 72 bp | ACAACTGCTTTACCGAGTCTGCCCAGTATGGGTGATTaGCCTGCTGTCGCAAAGAGCCCTTCAGGTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTALPSLPSMGD*PAVAKSPSGQS Trigger: ACTTTGACCTGAAGGGCTCTTTGCGACAGCAGGCCAATCACCCATACTGGGCAGACTCGGTAAAGCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
||
| CDS CAA 72 bp | CTGCCCTCCACCTGCAGGAACTTGACCATGTTCAGCTaGGGGTTAGCTTCCTTTTTCTCTGTTGGAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSTCRNLTMFS*GLASFFSVGAW Trigger: CCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCTGAACATGGTCAAGTTCCTGCAGGTGGAGGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
||
| CDS CAA 72 bp | GGCCCGATCCTGAAGGAGATAGTGCTCTGGAGATACTaGCAGTCATGGCTCACTGTGGCAATGAAGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPILKEIVLWRY*QSWLTVAMKCL Trigger: CAGACACTTCATTGCCACAGTGAGCCATGACTGCAAGTATCTCCAGAGCACTATCTCCTTCAGGATCGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CAA 90 bp | CCATTCAGCCCTTTGTGTGAGGACATGTTTCCTCGGGAGAGGATTTaGGCAATGGACTGTGCCAGGGATGGCTTTTCTGCTACCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: PFSPLCEDMFPRERI*AMDCARDGFSATMS Trigger: GCTCATGGTAGCAGAAAAGCCATCCCTGGCACAGTCCATTGCCAAAATCCTCTCCCGAGGAAACATGTCCTCACACAAAGGGCTGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232547.2 ENSMUST00000232581.2 |
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| CDS CAA 90 bp | GTCATCTTGAAGTGGACAGGTTGGCCAGCAAAGGTTCCTGTGTACTaGTGCACTGAACATGCCCCATTCAGCCCTTTGTGTGAGGACATG | + |
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Preference number: 6 (lower is better) Translates to: VILKWTGWPAKVPVY*CTEHAPFSPLCEDM Trigger: CATGTCCTCACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACACAGGAACCTTTGCTGGCCAACCTGTCCACTTCAAGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS GCA 72 bp | CGCAACATCTCCACAGTGTTCAGAGCAAGTGGTCTCTaGTTGGCTTTTTCTTTCCTGCTTGTAGCCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: RNISTVFRASGL*LAFSFLLVAST Trigger: GGTGGAGGCTACAAGCAGGAAAGAAAAAGCCAAGCAGAGACCACTTGCTCTGAACACTGTGGAGATGTTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 72 bp | CTCCACTGCGCTTCGGATGGTGGGGAGTACCAGCTCTaGATCAATCTTGTAGTAACCATGCACCAGAACTAT | + |
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Preference number: 6 (lower is better) Translates to: LHCASDGGEYQL*INLVVTMHQNY Trigger: ATAGTTCTGGTGCATGGTTACTACAAGATTGATGCAGAGCTGGTACTCCCCACCATCCGAAGCGCAGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CCA 72 bp | AGCTTGGGGTTAGCTTCCTTTTTCTCTGTTGGAGCTTaGCTGAAGAGCTCTGCAGGATCCACCTTATCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLGLASFFSVGA*LKSSAGSTLSH Trigger: GTGGGATAAGGTGGATCCTGCAGAGCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CCA 72 bp | GGCCACACGCAACATCTCCACAGTGTTCAGAGCAAGTaGTCTCTGCTTGGCTTTTTCTTTCCTGCTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GHTQHLHSVQSK*SLLGFFFPACS Trigger: GCTACAAGCAGGAAAGAAAAAGCCAAGCAGAGACCACTTGCTCTGAACACTGTGGAGATGTTGCGTGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CCA 72 bp | TATAGCCCTGTGTGTATAATCTCTCAGCTATTTGCATaGCGTGCTGTGGTCCCATACCCAGAGCTGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: YSPVCIISQLFA*RAVVPYPELSW Trigger: CCAGCTCAGCTCTGGGTATGGGACCACAGCACGCCATGCAAATAGCTGAGAGATTATACACACAGGGCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CAA 72 bp | AAGTGGACAGGTTGGCCAGCAAAGGTTCCTGTGTACTaGTGCACTGAACATGCCCCATTCAGCCCTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KWTGWPAKVPVY*CTEHAPFSPLC Trigger: ACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACACAGGAACCTTTGCTGGCCAACCTGTCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CAA 90 bp | AAGGTTCCTGTGTACTTGTGCACTGAACATGCCCCATTCAGCCCTTaGTGTGAGGACATGTTTCCTCGGGAGAGGATTTTGGCAATGGAC | + |
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Preference number: 6 (lower is better) Translates to: KVPVYLCTEHAPFSP*CEDMFPRERILAMD Trigger: GTCCATTGCCAAAATCCTCTCCCGAGGAAACATGTCCTCACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACACAGGAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS GCA 72 bp | TGGAGTATGCTAAGTATGAACCTGAGGACACCCACATaGCACACTCACCTTTCTTCATGTCTCGGAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WSMLSMNLRTPT*HTHLSSCLGRV Trigger: CACCCTTCCGAGACATGAAGAAAGGTGAGTGTGGCATGTGGGTGTCCTCAGGTTCATACTTAGCATACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232117.2 |
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| CDS CCA 72 bp | CTTTGTGTGAGGACATGTTTCCTCGGGAGAGGATTTTaGCAATGGACTGTGCCAGGGATGGCTTTTCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: LCVRTCFLGRGF*QWTVPGMAFLL Trigger: TAGCAGAAAAGCCATCCCTGGCACAGTCCATTGCCAAAATCCTCTCCCGAGGAAACATGTCCTCACACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232547.2 ENSMUST00000232581.2 |
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| CDS CAA 72 bp | GTGTACTTGTGCACTGAACATGCCCCATTCAGCCCTTaGTGTGAGGACATGTTTCCTCGGGAGAGGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: VYLCTEHAPFSP*CEDMFPRERIL Trigger: CAAAATCCTCTCCCGAGGAAACATGTCCTCACACAAAGGGCTGAATGGGGCATGTTCAGTGCACAAGTACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023465.16 ENSMUST00000231812.2 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232200.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CAA 72 bp | GAGCTGAACCTGGCACGAAACACTGTCTTCTCACCATaGTGGGCATTATTCATGACAGGCAGAACGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: ELNLARNTVFSP*WALFMTGRTAS Trigger: TGATGCCGTTCTGCCTGTCATGAATAATGCCCACAATGGTGAGAAGACAGTGTTTCGTGCCAGGTTCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232581.2 |
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| CDS CAA 90 bp | GACCATGTTCAGCTTGGGGTTAGCTTCCTTTTTCTCTGTTGGAGCTaGGCTGAAGAGCTCTGCAGGATCCACCTTATCCCACTTGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: DHVQLGVSFLFLCWS*AEELCRIHLIPLVV Trigger: TACAACAAGTGGGATAAGGTGGATCCTGCAGAGCTCTTCAGCCAAGCTCCAACAGAGAAAAAGGAAGCTAACCCCAAGCTGAACATGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS CAA 90 bp | AAGTGTTCAGGCCCGATCCTGAAGGAGATAGTGCTCTGGAGATACTaGCAGTCATGGCTCACTGTGGCAATGAAGTGTCTGGTGATATAC | + |
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Preference number: 6 (lower is better) Translates to: KCSGPILKEIVLWRY*QSWLTVAMKCLVIY Trigger: GTATATCACCAGACACTTCATTGCCACAGTGAGCCATGACTGCAAGTATCTCCAGAGCACTATCTCCTTCAGGATCGGGCCTGAACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 72 bp | ATTGCAGCCCATGCCTGTTACTTGCTTGCTGCATTGTaGACTGTAAGACACTTTCTTCATGTCTCGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: IAAHACYLLAAL*TVRHFLHVSEG Trigger: CCCTTCCGAGACATGAAGAAAGTGTCTTACAGTGCACAATGCAGCAAGCAAGTAACAGGCATGGGCTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231966.2 |
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| CDS CCA 72 bp | GGGCACGCTCTGCCAAGGCATGATCTCTGTGAAGCCTaGAGAAATAACTGTTTTTCCCATGCATGTAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GHALPRHDLCEA*RNNCFSHACKV Trigger: CACTTTACATGCATGGGAAAAACAGTTATTTCTCCAGGCTTCACAGAGATCATGCCTTGGCAGAGCGTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS TCA 72 bp | TTGTTGTACTTCCCCAGAAAATCCAGTGTCATCACATaGCCGCAGACAGACGTCATCTTGAAGTGGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: LLYFPRKSSVIT*PQTDVILKWTG Trigger: ACCTGTCCACTTCAAGATGACGTCTGTCTGCGGTCATGTGATGACACTGGATTTTCTGGGGAAGTACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232231.2 ENSMUST00000232581.2 |
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| CDS TCA 72 bp | TCATGTCTTTCTACACAGAATCCCAGGGTAGGAGTCTaGCATGGCCCAAAGGAGATGAGAGAGCTGTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: SCLSTQNPRVGV*HGPKEMRELSK Trigger: TTTAGACAGCTCTCTCATCTCCTTTGGGCCATGTCAGACTCCTACCCTGGGATTCTGTGTAGAAAGACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023465.16 ENSMUST00000232017.2 ENSMUST00000232080.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS GCA 72 bp | TGCACTCATTGCAGCCCATGCCTGTTACTTGCTTGCTaGATTGTGCACTGTAAGACACTTTCTTCATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CTHCSPCLLLAC*IVHCKTLSSCL Trigger: GAGACATGAAGAAAGTGTCTTACAGTGCACAATGCAGCAAGCAAGTAACAGGCATGGGCTGCAATGAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231966.2 |
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| CDS GCA 72 bp | GTGTGCACTCATTGCAGCCCATGCCTGTTACTTGCTTaGTGCATTGTGCACTGTAAGACACTTTCTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: VCTHCSPCLLLA*CIVHCKTLSSC Trigger: ACATGAAGAAAGTGTCTTACAGTGCACAATGCAGCAAGCAAGTAACAGGCATGGGCTGCAATGAGTGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231966.2 |
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| CDS CAA 72 bp | CTTTCTCTTGAAGATATCCAGGGTATGGCCCAGAACTaGGTGGTAGTCAGCTTTGCCCTGGGCAATAAGATT | + |
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Preference number: 6 (lower is better) Translates to: LSLEDIQGMAQN*VVVSFALGNKI Trigger: AATCTTATTGCCCAGGGCAAAGCTGACTACCACCAAGTTCTGGGCCATACCCTGGATATCTTCAAGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023465.16 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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| CDS CAA 72 bp | CTCATTGCAGCCCATGCCTGTTACTTGCTTGCTGCATaGTGCACTGTAAGACACTTTCTTCATGTCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LIAAHACYLLAA*CTVRHFLHVSE Trigger: TTCCGAGACATGAAGAAAGTGTCTTACAGTGCACAATGCAGCAAGCAAGTAACAGGCATGGGCTGCAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231966.2 |
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| CDS CCA 72 bp | TGTATGAACCTTGGCCTGAAGCACCCAGTAGGTCTCTaGCTTGAAGGACTGGATTTTATCATGTCTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: CMNLGLKHPVGL*LEGLDFIMSFY Trigger: GTAGAAAGACATGATAAAATCCAGTCCTTCAAGCCAGAGACCTACTGGGTGCTTCAGGCCAAGGTTCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023465.16 ENSMUST00000232080.2 ENSMUST00000232117.2 ENSMUST00000232581.2 |
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