Pregenerated sensors for TOMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078630Ensembl transcript IDs: ENSMUST00000106969.9, ENSMUST00000106970.3
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGAAGGTaGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCCAGGCGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: SCSSLPDSRQARLGR*KLQVGQLLTWSRRP Trigger: AGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 90 bp | GGCAGGCAAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTaGCCTGGTCCAGGCGCCCTGAGGCCTACAGAATCTTTCTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: GRQGWEGGSSKLASS*PGPGALRPTESFCS Trigger: AGAGCAGAAAGATTCTGTAGGCCTCAGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CCA 90 bp | GCAAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTGACCTaGTCCAGGCGCCCTGAGGCCTACAGAATCTTTCTGCTCTACCAG | + |
|
Preference number: 1 (lower is better) Translates to: ARLGRWKLQVGQLLT*SRRPEAYRIFLLYQ Trigger: CTGGTAGAGCAGAAAGATTCTGTAGGCCTCAGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 90 bp | TGTACCCAGATGTTCCTACAGGGTCTCAGTGTCTGCAGCTGCCTCTaGTCTCATCTGAATCTCATAGGTGTGAGGCTCTGGGCTTCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: CTQMFLQGLSVCSCL*SHLNLIGVRLWASA Trigger: GGCAGAAGCCCAGAGCCTCACACCTATGAGATTCAGATGAGATCAGAGGCAGCTGCAGACACTGAGACCCTGTAGGAACATCTGGGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 90 bp | CAAGCCGGCCTCAGAGGTGAGTGGTTCCTGTGGGTGGGGCCTATGTaGAGCCCAGTAGAACAAGGCTTTACTTTAATGGCCTTACTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: QAGLRGEWFLWVGPM*SPVEQGFTLMALLL Trigger: CAAAAGTAAGGCCATTAAAGTAAAGCCTTGTTCTACTGGGCTTCACATAGGCCCCACCCACAGGAACCACTCACCTCTGAGGCCGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 90 bp | TCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGAGTAAACTaGATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATCAAT | + |
|
Preference number: 1 (lower is better) Translates to: SLQPLQPAVSVLRVN*ISEEGKIHLEGAIN Trigger: ATTGATTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR TCA 90 bp | AATTTGACACTTCAGATTAATATGGAGGTTGGAGGGGGACAAAGTTaGAAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATAC | + |
|
Preference number: 1 (lower is better) Translates to: NLTLQINMEVGGGQS*KECLPSLTIACVGY Trigger: GTATCCAACACATGCTATGGTCAGGCTGGGGAGGCATTCTTTTCAACTTTGTCCCCCTCCAACCTCCATATTAATCTGAAGTGTCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGGACCTTCAGGTCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGCTCAGCCCCTCAGCCTaGAGAACCAGCTTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVMQQPARLKAGKVGLSPSA*RTSLWL Trigger: CAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAG...CCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGACCTGAAGGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | AGGCAGGCAAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTaGACCTGGTCCAGGCGCCCTGAGGCCTACAGAATCTTTCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RQARLGRWKLQVGQL*TWSRRPEAYRIFLL Trigger: GAGCAGAAAGATTCTGTAGGCCTCAGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGCCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | ACCTTCAGGTCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTaGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TFRSCSSLPDSRQAR*GRWKLQVGQLLTWS Trigger: GGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGACCTGAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCCAGGCGCTTGGTTGCCAGGTGTaGTCCCTTTCTAGCCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KVGKVEAPSWPALDLVQALGCQV*SLSSPL Trigger: AAGAGGGCTAGAAAGGGACCACACCTGGCAACCAAG...CGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR GCA 90 bp | AATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTACCTCACTCCTTGGTTaGCAGGTGTGGTCCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NLQPQPLSLQNQLVAVVPTSLLG*QVWSLS Trigger: AGAAAGGGACCACACCTGGCAACCAAGGAGTGAGGT...AGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGTAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | ACAAGCCAAGGTGGCCTCAGTGATTCCAGACCACCCCAACCTATTTaGAATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TSQGGLSDSRPPQPI*NLQPQPLSLQNQLV Trigger: CACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGTAGATTCAAAATAGGTTGGGGTGGTCTGGAATCACTGAGGCCACCTTGGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCCAGGCGATTCTGAGGTCTGCTTaGATGGGGTTGGAATTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: KVGKVEAPSWPALDLVQAILRSA*MGLELY Trigger: ATACAATTCCAACCCCATTCAAGCAGACCTCAGAAT...CGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCTGTCTGCAGCTGCCTCTaGTCTCATCTGAATCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LSLRHFLSYCQDKVSLGPVCSCL*SHLNLI Trigger: TATGAGATTCAGATGAGATCAGAGGCAGCTGCAGAC...AGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCGGAGGGGGACAAAGTTaGAAAGAATGCCTCCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GPLGRERLAVLLTVELSLGGGQS*KECLPS Trigger: GCTGGGGAGGCATTCTTTTCAACTTTGTCCCCCTCC...GAGAGATAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCTCCTTGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTTTCAGAATCTTTTCTTaGACATTGGGACGGGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: RSPWALPGHESSLESQEPFRIFS*TLGRGY Trigger: ATAACCCCGTCCCAATGTCCAAGAAAAGATTCTGAA...AGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAAGGAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | TGTATGTATATCACATGTGTGCCTGTGCTATGTGAGTGCTGGGAATaGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: CMYITCVPVLCECWE*NPGPLGRERLAVLL Trigger: TAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAGCACAGGCACACATGTGATATACATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCACTTGCTTCCAGTTCCTaGTTTTCTATGAGGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: AVLLTVELSLQPLQPAVSLASSS*FSMRGP Trigger: AGGTCCCCTCATAGAAAATCAGGAACTGGAAGCAAG...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAAGACCATAGCATGTGTTaGATACAAGACAGAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LNPGPLGRERLAVLLTVEDHSMC*IQDREG Trigger: TCCCTCTCTGTCTTGTATCCAACACATGCTATGGTC...TTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CCA 90 bp | TATTCCCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGATAGGTGTGAGGCTCTaGGCTTCTGCCAACCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: YSLFVGGTQSSESFLGHWIGVRL*ASANQM Trigger: CATCTGGTTGGCAGAAGCCCAGAGCCTCACACCTAT...CCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CCA 90 bp | AACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTAGACCATAGCATGTGTTaGATACAAGACAGAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NPGPLGRERLAVLLTVELDHSMC*IQDREG Trigger: TCCCTCTCTGTCTTGTATCCAACACATGCTATGGTC...TAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR CAA 90 bp | TCTATTCCCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTaGGACATTGGGACGGGGTTATGTAAGGACTCTCAAGCAAACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SIPCLLVGPRVQNLF*DIGTGLCKDSQANL Trigger: TAGGTTTGCTTGAGAGTCCTTACATAACCCCGTCCCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | AAAGACACAGGACTGATTGTTTCCCCAATGTCTATTCCCTGTTTGTaGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGGACG | + |
|
Preference number: 2 (lower is better) Translates to: KDTGLIVSPMSIPCL*VGPRVQNLFLDIGT Trigger: CGTCCCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATAGACATTGGGGAAACAATCAGTCCTGTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCATTCTGAGGTCTGCTTaGATGGGGTTGGAATTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: GPLGRERLAVLLTVELSLILRSA*MGLELY Trigger: ATACAATTCCAACCCCATTCAAGCAGACCTCAGAAT...GAGAGATAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAAGGGAAAGATTCACTTaGAGGGAGCAATCAATAACT | + |
|
Preference number: 2 (lower is better) Translates to: AVLLTVELSLQPLQPAVSRERFT*REQSIT Trigger: AGTTATTGATTGCTCCCTCCAAGTGAATCTTTCCCT...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR GCA 90 bp | TATTCCCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGACAGCTCAAGCCTCTTaGTTCCAGTTCCTGATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: YSLFVGGTQSSESFLGHWTAQAS*FQFLIF Trigger: GAAAATCAGGAACTGGAAGCAAGAGGCTTGAGCTGT...CCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 90 bp | CAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATCAATAACTAAATaGACAGCTCAAGCCTCTTGCTTCCAGTTCCTGATTTTCTATGAG | + |
|
Preference number: 2 (lower is better) Translates to: QRRERFTWREQSITK*TAQASCFQFLIFYE Trigger: CTCATAGAAAATCAGGAACTGGAAGCAAGAGGCTTGAGCTGTCAATTTAGTTATTGATTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR CAA 90 bp | AATAAAGACACAGGACTGATTGTTTCCCCAATGTCTATTCCCTGTTaGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NKDTGLIVSPMSIPC*LVGPRVQNLFLDIG Trigger: CCCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATAGACATTGGGGAAACAATCAGTCCTGTGTCTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTCCCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGGTGTTAAGAGTAAACTaGATCTCAGAGGAGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSLFVGGTQSSESFLGHWVLRVN*ISEEGK Trigger: CTTTCCCTCCTCTGAGATTCAGTTTACTCTTAACAC...CCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTAAGAGTAAACTGAATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATACAGCTCAAGCCTCTTaGTTCCAGTTCCTGATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VKSKLNLRGGKDSLGGSNTAQAS*FQFLIF Trigger: GAAAATCAGGAACTGGAAGCAAGAGGCTTGAGCTGT...ATTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGAAGGGAAAGATTCACTTaGAGGGAGCAATCAATAACT | + |
|
Preference number: 2 (lower is better) Translates to: LTVELSLQPLQPAVSVLRRERFT*REQSIT Trigger: AGTTATTGATTGCTCCCTCCAAGTGAATCTTTCCCT...TCTTAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR TCA 72 bp | GGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTaGCCTGGTCCAGGCGCCCTGAGGCCTACAGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: GWEGGSSKLASS*PGPGALRPTES Trigger: AGATTCTGTAGGCCTCAGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CCA 72 bp | AGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGAAGGTaGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLPDSRQARLGR*KLQVGQLLTWS Trigger: GGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTTGCCTGCCTTGAGTCTGGCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CCA 72 bp | CTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCTaGCTGGTACCTCACTCCTTGGTTGCCAGGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LESQEPEPIPPS*LVPHSLVARCG Trigger: ACCACACCTGGCAACCAAGGAGTGAGGTACCAGCCAGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CCA 72 bp | GGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTaGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: GTFSATARTRSP*ALPGHESSLES Trigger: GGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACCTTCAGGTCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGTGTGAGTGCTGGGAATaGAACCCAGGTCCTTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KDLQVMQQPARLKAGKVGCECWE*NPGPLG Trigger: ACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACA...CCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGACCTGAAGGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTTGACCTGGTCCAGGCGTCTATTCCCTGTTTGTaGGTGGGACCCAGAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVGKVEAPSWPALDLVQASIPCL*VGPRVQ Trigger: CTGAACTCTGGGTCCCACCAACAAACAGGGAATAGA...CGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR GCA 72 bp | CCTGGTCCAGGCGCCCTGAGGCCTACAGAATCTTTCTaGTCTACCAGCACTACGATGATGAGGAAGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGPGALRPTESF*STSTTMMRKKR Trigger: CCTCTTCTTCCTCATCATCGTAGTGCTGGTAGAGCAGAAAGATTCTGTAGGCCTCAGGGCGCCTGGACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACCTTCAGGTCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGTTCTTATGGCCTAGCTaGTACCCAGATGTTCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: KDLQVMQQPARLKAGKVGFLWPS*YPDVPT Trigger: TGTAGGAACATCTGGGTACAAGCTAGGCCATAAGAA...CCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGACCTGAAGGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 72 bp | CTCAGAGGTGAGTGGTTCCTGTGGGTGGGGCCTATGTaGAGCCCAGTAGAACAAGGCTTTACTTTAATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGEWFLWVGPM*SPVEQGFTLMA Trigger: GGCCATTAAAGTAAAGCCTTGTTCTACTGGGCTTCACATAGGCCCCACCCACAGGAACCACTCACCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR GCA 72 bp | GACAGAAAACGTGGGAACCTGAGGGGCTATGCATTGTaGCTAGTACTAAGGACCTTCAGGTCATGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DRKRGNLRGYAL*LVLRTFRSCSS Trigger: GCTGCTGCATGACCTGAAGGTCCTTAGTACTAGGCACAATGCATAGCCCCTCAGGTTCCCACGTTTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 72 bp | ATGTTCCTACAGGGTCTCAGTGTCTGCAGCTGCCTCTaGTCTCATCTGAATCTCATAGGTGTGAGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MFLQGLSVCSCL*SHLNLIGVRLW Trigger: CCAGAGCCTCACACCTATGAGATTCAGATGAGATCAGAGGCAGCTGCAGACACTGAGACCCTGTAGGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR TCA 72 bp | CCCCTTCAGCCAGCTGTCTCAGTGTTAAGAGTAAACTaGATCTCAGAGGAGGGAAAGATTCACTTGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLQPAVSVLRVN*ISEEGKIHLEG Trigger: TCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAACACTGAGACAGCTGGCTGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR GCA 72 bp | TGTATGTATATCACATGTGTGCCTGTGCTATGTGAGTaGTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CMYITCVPVLCE*WELNPGPLGRE Trigger: CTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAGCACAGGCACACATGTGATATACATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGATTAATATGGAGGTaGGAGGGGGACAAAGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTVELSLQPLQPAVSVLRLIWR*EGDKVE Trigger: TTCAACTTTGTCCCCCTCCAACCTCCATATTAATCT...TAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATCTTTCTGCTCTACCAGCACTACGATGATGAGGAAGAAGAGGATGATGAAGATCTTTTCTTGGACATaGGGACGGGGTTATGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESFCSTSTTMMRKKRMMKIFSWT*GRGYVR Trigger: CCTTACATAACCCCGTCCCAATGTCCAAGAAAAGAT...CTTCATCATCCTCTTCTTCCTCATCATCGTAGTGCTGGTAGAGCAGAAAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTACAATCAATAACTAAATaGACAGCTCAAGCCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTVELSLQPLQPAVSVLQSITK*TAQASC Trigger: GCAAGAGGCTTGAGCTGTCAATTTAGTTATTGATTG...TAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR TCA 72 bp | TGTTGGATACAAGACAGAGAGGGAAACGAGATATTCTaGGGTCTGCTTGAATGGGGTTGGAATTGTATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: CWIQDREGNEIF*GLLEWGWNCIS Trigger: ACTAATACAATTCCAACCCCATTCAAGCAGACCTCAGAATATCTCGTTTCCCTCTCTGTCTTGTATCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTTTAATGGCCTTACTTTTGGCTCAGTACAATTGTGGTTTTCAATCTGGGATGTCTATTCCCTGTTaGTTGGTGGGACCCAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FTLMALLLAQYNCGFQSGMSIPC*LVGPRV Trigger: AACTCTGGGTCCCACCAACAAACAGGGAATAGACAT...CCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAAAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR GCA 72 bp | TACAAGACAGAGAGGGAAACGAGATATTCTGAGGTCTaGTTGAATGGGGTTGGAATTGTATTAGTAAATATC | + |
|
Preference number: 3 (lower is better) Translates to: YKTERETRYSEV*LNGVGIVLVNI Trigger: GATATTTACTAATACAATTCCAACCCCATTCAAGCAGACCTCAGAATATCTCGTTTCCCTCTCTGTCTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTTTAATGGCCTTACTTTTGGCTCAGTACAATTGTGGTTTTCAATCTGGGCAATCAATAACTAAATaGACAGCTCAAGCCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FTLMALLLAQYNCGFQSGQSITK*TAQASC Trigger: GCAAGAGGCTTGAGCTGTCAATTTAGTTATTGATTG...CCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | GGTCTCCTTGGGCCCTTCCAGGCCATGAGTCTTCCCTaGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLGPFQAMSLP*NPKSLSPSHLP Trigger: AGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAAGGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | AGGTTGGGAAGGTGGAAGCTCCAAGTTGGCCAGCTCTaGACCTGGTCCAGGCGCCCTGAGGCCTACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RLGRWKLQVGQL*TWSRRPEAYRI Trigger: GATTCTGTAGGCCTCAGGGCGCCTGGACCAGGTCAAGAGCTGGCCAACTTGGAGCTTCCACCTTCCCAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR GCA 90 bp | AATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTGGTACTCGCAGCAGCTaGTCCAATGGTCAAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQPQPLSLQNQLVAVVPGTRSS*SNGQAW Trigger: CCACGCTTGACCATTGGAGCAGCTGCTGCGAGTACC...AGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGTAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACCTTCAGGTCATGCAGCAGCCTGCCAGACTCAAGGCAGGCAAGGTTGGGAGCCGCATCAGAATCTaGCCTTTAACAGGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVMQQPARLKAGKVGSRIRI*PLTGPM Trigger: CATGGGCCCTGTTAAAGGTCAGATTCTGATGCGGCT...CCCAACCTTGCCTGCCTTGAGTCTGGCAGGCTGCTGCATGACCTGAAGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR TCA 90 bp | CCTGTGCTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTAGCCTGCCAGCCGGATaGCTTTTTCAGCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLCECWELNPGPLGRERSLPAG*LFQPLL Trigger: CAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCT...ACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAGCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGACCAGCAGTCGGAAATaGTGCCGGTATCTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CECWELNPGPLGRERLAVTSSRK*CRYLTS Trigger: GCTGGTGAGATACCGGCACCATTTCCGACTGCTGGT...CACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | CTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCATGTGGGAGCAGAGCATaGGCCTCCAGTAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCECWELNPGPLGRERLACGSRA*ASSSCR Trigger: TCTGCAGCTACTGGAGGCCCATGCTCTGCTCCCACA...TGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGAATGGCAGGGAAGTCTaGGAGGCTGGTGTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CECWELNPGPLGRERLAVNGREV*EAGVVK Trigger: CTTCACCACACCAGCCTCCCAGACTTCCCTGCCATT...CACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR CAA 72 bp | GGTGGCCTCAGTGATTCCAGACCACCCCAACCTATTTaGAATCTACAGCCTCAGCCCCTCAGCCTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLSDSRPPQPI*NLQPQPLSLQN Trigger: GTTCTGCAGGCTGAGGGGCTGAGGCTGTAGATTCAAAATAGGTTGGGGTGGTCTGGAATCACTGAGGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCACACTGCTGCTGTACGTaGGTCCCGCTCCACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVLLTVELSLQPLQPAVSHCCCT*VPLHSE Trigger: CTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTG...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | CTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCACAGCAGCTGCTCCAATaGTCAAGCGTGGTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCECWELNPGPLGRERLAQQLLQ*SSVVRM Trigger: CATCCTCACCACGCTTGACCATTGGAGCAGCTGCTG...TGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | GGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCGGAAGTCTGGGAGGCTaGTGTGGTGAAGGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGRERLAVLLTVELSLGSLGG*CGEGGS Trigger: GCTGCCGCCTTCACCACACCAGCCTCCCAGACTTCC...GAGAGATAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | CTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAAATGGCAGGGAAGTCTaGGAGGCTGGTGTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCECWELNPGPLGRERLANGREV*EAGVVK Trigger: CTTCACCACACCAGCCTCCCAGACTTCCCTGCCATT...TGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTGCTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTAGCCGCATCAGAATCTaGCCTTTAACAGGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PVLCECWELNPGPLGRERSRIRI*PLTGPM Trigger: CATGGGCCCTGTTAAAGGTCAGATTCTGATGCGGCT...ACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGTCCCGCTCCACAGTaGGAAGGCGACTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTVELSLQPLQPAVSVLSPAPQ*EGDFQG Trigger: CCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACT...TAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGGTACTCGCAGCAGCTaGTCCAATGGTCAAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLLTVELSLQPLQPAVSGTRSS*SNGQAW Trigger: CCACGCTTGACCATTGGAGCAGCTGCTGCGAGTACC...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGAGTATCCACAGTATGTaGCCAGCTCCAGCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: CECWELNPGPLGRERLAVSIHSM*PAPAHK Trigger: CTTGTGTGCTGGAGCTGGGCACATACTGTGGATACT...CACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCATGTGGGAGCAGAGCATaGGCCTCCAGTAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVLLTVELSLQPLQPAVSCGSRA*ASSSCR Trigger: TCTGCAGCTACTGGAGGCCCATGCTCTGCTCCCACA...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAGGAAGTCTGGGAGGCTaGTGTGGTGAAGGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTVELSLQPLQPAVSVLGSLGG*CGEGGS Trigger: GCTGCCGCCTTCACCACACCAGCCTCCCAGACTTCC...TAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | CTGACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGAGATATTCTGAGAGTCCCGCTCCACAGTaGGAAGGCGACTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTIACVGYKTERETRYSESPAPQ*EGDFQG Trigger: CCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACT...CTCAGAATATCTCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCAGCCTGCCAGCCGGATaGCTTTTTCAGCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGRERLAVLLTVELSLSLPAG*LFQPLL Trigger: CAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCT...GAGAGATAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGTGGGATCACTTCCTCTaGGCTGCCTGCAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KECLPSLTIACVGYKTERWDHFL*AACNEL Trigger: GAGCTCATTGCAGGCAGCTCAGAGGAAGTGATCCCA...CCTCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTGGGGAGGCATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR GCA 90 bp | AACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTAATACCGAGGTCGGTGTaGCAGGAGCACCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPGPLGRERLAVLLTVELIPRSV*QEHQIC Trigger: GCAGATCTGGTGCTCCTGGCACACCGACCTCGGTAT...TAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGTTAACAGGGCCCATGTaGCTCAGGTACTCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KECLPSLTIACVGYKTERLTGPM*LRYSQQ Trigger: CTGCTGCGAGTACCTGAGCCACATGGGCCCTGTTAA...CCTCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTGGGGAGGCATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCAATGGTCAAGCGTGGTaGGGATGTGACCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGRERLAVLLTVELSLNGQAW*GCDQGL Trigger: GAGACCCTGGTCACATCCTCACCACGCTTGACCATT...GAGAGATAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | ACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGAGATATTCTGAGGTCCACTGCTGCTGTACGTaGGTCCCGCTCCACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TIACVGYKTERETRYSEVHCCCT*VPLHSE Trigger: CTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTG...GACCTCAGAATATCTCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTAACCAGCAGTCGGAAATaGTGCCGGTATCTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPGPLGRERLAVLLTVELTSSRK*CRYLTS Trigger: GCTGGTGAGATACCGGCACCATTTCCGACTGCTGGT...TAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGCAGTGTTACCACGAGTaGCAGGAATGCCAGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KECLPSLTIACVGYKTERQCYHE*QECQCN Trigger: ATTGCACTGGCATTCCTGCCACTCGTGGTAACACTG...CCTCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTGGGGAGGCATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCACCAGGAAAAAGCACATaGTCAGCCAATACAGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AVLLTVELSLQPLQPAVSPGKST*SANTVA Trigger: CGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGG...TGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR GCA 90 bp | TATTCCCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATTGGCAGGAGCACCAGATCTaGACGATTCAGCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLFVGGTQSSESFLGHWQEHQI*TIQLVL Trigger: CAGCACCAGCTGAATCGTGCAGATCTGGTGCTCCTG...CCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR CCA 90 bp | AACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTACAGTGTTACCACGAGTaGCAGGAATGCCAGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NPGPLGRERLAVLLTVELQCYHE*QECQCN Trigger: ATTGCACTGGCATTCCTGCCACTCGTGGTAACACTG...TAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | CTGACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGAGATATTCTGAGTTAACAGGGCCCATGTaGCTCAGGTACTCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTIACVGYKTERETRYSELTGPM*LRYSQQ Trigger: CTGCTGCGAGTACCTGAGCCACATGGGCCCTGTTAA...CTCAGAATATCTCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCTCTTAACTGTTGAATTACCAGGAAAAAGCACATaGTCAGCCAATACAGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NPGPLGRERLAVLLTVELPGKST*SANTVA Trigger: CGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGG...TAATTCAACAGTTAAGAGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR CAA 72 bp | TGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGACATaGGGACGGGGTTATGTAAGGACTCTCAAGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: WWDPEFRIFSWT*GRGYVRTLKQT Trigger: GGTTTGCTTGAGAGTCCTTACATAACCCCGTCCCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR TCA 90 bp | ACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGAGATATTCTGAGGTCCTCAATCCGAAGTCCTaGCAGGCAGTCTCGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TIACVGYKTERETRYSEVLNPKS*QAVSKS Trigger: GGATTTCGAGACTGCCTGTCAGGACTTCGGATTGAG...GACCTCAGAATATCTCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | GTTAAGAGTAAACTGAATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATAATGGTCAAGCGTGGTaGGGATGTGACCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKLNLRGGKDSLGGSNNGQAW*GCDQGL Trigger: GAGACCCTGGTCACATCCTCACCACGCTTGACCATT...ATTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR TCA 90 bp | TTAATGGCCTTACTTTTGGCTCAGTACAATTGTGGTTTTCAATCTGGGAAGACATGGGATCACTTCCTCTaGGCTGCCTGCAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMALLLAQYNCGFQSGKTWDHFL*AACNEL Trigger: GAGCTCATTGCAGGCAGCTCAGAGGAAGTGATCCCA...TGTCTTCCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTTTAATGGCCTTACTTTTGGCTCAGTACAATTGTGGTTTTCAATCTGGGATACCGAGGTCGGTGTaGCAGGAGCACCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLMALLLAQYNCGFQSGIPRSV*QEHQIC Trigger: GCAGATCTGGTGCTCCTGGCACACCGACCTCGGTAT...CCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | TGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTaGGACATTGGGACGGGGTTATGTAAGGACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLLVGPRVQNLF*DIGTGLCKDSQ Trigger: TTGAGAGTCCTTACATAACCCCGTCCCAATGTCCAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | ACAGGACTGATTGTTTCCCCAATGTCTATTCCCTGTTaGTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLIVSPMSIPC*LVGPRVQNLFL Trigger: CAAGAAAAGATTCTGAACTCTGGGTCCCACCAACAAACAGGGAATAGACATTGGGGAAACAATCAGTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| CDS-3UTR GCA 90 bp | TTAATGGCCTTACTTTTGGCTCAGTACAATTGTGGTTTTCAATCTGGGAAGACAAGTATCCACAGTATGTaGCCAGCTCCAGCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMALLLAQYNCGFQSGKTSIHSM*PAPAHK Trigger: CTTGTGTGCTGGAGCTGGGCACATACTGTGGATACT...TGTCTTCCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | GAAAGATTCACTTGGAGGGAGCAATCAATAACTAAATaGACAGCTCAAGCCTCTTGCTTCCAGTTCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ERFTWREQSITK*TAQASCFQFLI Trigger: AATCAGGAACTGGAAGCAAGAGGCTTGAGCTGTCAATTTAGTTATTGATTGCTCCCTCCAAGTGAATCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| 3UTR CAA 72 bp | CCAGTAGAACAAGGCTTTACTTTAATGGCCTTACTTTaGGCTCAGTACAATTGTGGTTTTCAATCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVEQGFTLMALL*AQYNCGFQSGK Trigger: CTTCCCAGATTGAAAACCACAATTGTACTGAGCCAAAAGTAAGGCCATTAAAGTAAAGCCTTGTTCTACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106969.9 |
||
| 3UTR CAA 72 bp | AAGACAGAGAGGGAAACGAGATATTCTGAGGTCTGCTaGAATGGGGTTGGAATTGTATTAGTAAATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTERETRYSEVC*NGVGIVLVNIS Trigger: TGAGATATTTACTAATACAATTCCAACCCCATTCAAGCAGACCTCAGAATATCTCGTTTCCCTCTCTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 90 bp | GAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTaGGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EACQPDDFFSHCCCT*VPLHSEKATSRGQG Trigger: GCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 90 bp | GGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTaGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGTAGCTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGVHQEKAHGQPIQ*RHVGAEHGPPVAAD Trigger: ATCTGCAGCTACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGGTGCACCCCGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 90 bp | CTCTTGGTGTACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATaGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVYCRKRGAPGKST*SANTVAPCGSRAWA Trigger: GGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGGTGCACCCCGCTTCCTACAGTACACCAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS GCA 90 bp | CGAAATCCTCTCAGCAGGACTGTACGCACCAGCAGTCGGAAATGGTaGCGGTATCTCACCAGCAGTGTTACCACGAGTGGCAGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNPLSRTVRTSSRKW*RYLTSSVTTSGRNA Trigger: GGCATTCCTGCCACTCGTGGTAACACTGCTGGTGAGATACCGGCACCATTTCCGACTGCTGGTGCGTACAGTCCTGCTGAGAGGATTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 90 bp | ATGGGTGAGCACATAGCTGAAAGCCCGCTCCTCAATCCGAAGTCCTaGCAGGCAGTCTCGAAATCCTCTCAGCAGGACTGTACGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MGEHIAESPLLNPKS*QAVSKSSQQDCTHQ Trigger: CTGGTGCGTACAGTCCTGCTGAGAGGATTTCGAGACTGCCTGTCAGGACTTCGGATTGAGGAGCGGGCTTTCAGCTATGTGCTCACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 90 bp | TCTCGAAATCCTCTCAGCAGGACTGTACGCACCAGCAGTCGGAAATaGTGCCGGTATCTCACCAGCAGTGTTACCACGAGTGGCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRNPLSRTVRTSSRK*CRYLTSSVTTSGRN Trigger: ATTCCTGCCACTCGTGGTAACACTGCTGGTGAGATACCGGCACCATTTCCGACTGCTGGTGCGTACAGTCCTGCTGAGAGGATTTCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCTATGTGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTAATGAGCTCCACCATTaGCTCATCGAAGCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVLCECWELNPGPLGRERNELHH*LIEACQ Trigger: CTGGCAGGCTTCGATGAGCAAATGGTGGAGCTCATT...ACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCACATAGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS-3UTR CAA 90 bp | AAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGAATGAGCTCCACCATTaGCTCATCGAAGCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KECLPSLTIACVGYKTERNELHH*LIEACQ Trigger: CTGGCAGGCTTCGATGAGCAAATGGTGGAGCTCATT...CCTCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTGGGGAGGCATTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 72 bp | CAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTaGGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QPLLLYVSPAPQ*EGDFQGARLAQ Trigger: TTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 72 bp | GGTACTCGCAGCAGCTGCTCCAATGGTCAAGCGTGGTaGGGATGTGACCAGGGTCTCCAGGCAGGGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTRSSCSNGQAW*GCDQGLQAGHG Trigger: CCCATGCCCTGCCTGGAGACCCTGGTCACATCCTCACCACGCTTGACCATTGGAGCAGCTGCTGCGAGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 72 bp | CAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTaGGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPDDFFSHCCCT*VPLHSEKATSR Trigger: CCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 72 bp | GCTCCACCATTTGCTCATCGAAGCCTGCCAGCCGGATaGCTTTTTCAGCCACTGCTGCTGTACGTGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: APPFAHRSLPAG*LFQPLLLYVSP Trigger: GGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAATGGTGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS TCA 72 bp | TTAGGCGTGGGATCACTTCCTCTGAGCTGCCTGCAATaGGCTCCACCATTTGCTCATCGAAGCCTGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGVGSLPLSCLQ*APPFAHRSLPA Trigger: GGCTGGCAGGCTTCGATGAGCAAATGGTGGAGCTCATTGCAGGCAGCTCAGAGGAAGTGATCCCACGCCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 72 bp | CCTCTCAGCAGGACTGTACGCACCAGCAGTCGGAAATaGTGCCGGTATCTCACCAGCAGTGTTACCACGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLSRTVRTSSRK*CRYLTSSVTTS Trigger: ACTCGTGGTAACACTGCTGGTGAGATACCGGCACCATTTCCGACTGCTGGTGCGTACAGTCCTGCTGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 72 bp | GTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTaGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VHQEKAHGQPIQ*RHVGAEHGPPV Trigger: TACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGGTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS GCA 72 bp | GCCTGCAATGAGCTCCACCATTTGCTCATCGAAGCCTaGCAGCCGGATGACTTTTTCAGCCACTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACNELHHLLIEA*QPDDFFSHCCC Trigger: ACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAATGGTGGAGCTCATTGCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS CCA 72 bp | TACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATaGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YCRKRGAPGKST*SANTVAPCGSR Trigger: TCTGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTGCTTTTTCCTGGTGCACCCCGCTTCCTACAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||
| CDS GCA 72 bp | ACTTCCTCTGAGCTGCCTGCAATGAGCTCCACCATTTaGTCATCGAAGCCTGCCAGCCGGATGACTTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSSELPAMSSTI*SSKPASRMTFS Trigger: TGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAATGGTGGAGCTCATTGCAGGCAGCTCAGAGGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106969.9 ENSMUST00000106970.3 |
||