Pregenerated sensors for TOMM70A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022752Ensembl transcript IDs: ENSMUST00000166897.3
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGACTATTTTTGTCTGTGTATGTGTCATGGGTATGTGCAGGTGCTaGGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCCT | + |
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Preference number: 1 (lower is better) Translates to: WTIFVCVCVMGMCRC*GQKEFPRAAVRGIP Trigger: AGGAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCCATGACACATACACAGACAAAAATAGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CCA 90 bp | TCTCCTGCTCTAAAGGGGGAAAATGACATTTACCAGAGCTCACACTaGGGATTAAGCCCAGATCTCAATGCTAAACATTCTCCTTACCAC | + |
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Preference number: 1 (lower is better) Translates to: SPALKGENDIYQSSH*GLSPDLNAKHSPYH Trigger: GTGGTAAGGAGAATGTTTAGCATTGAGATCTGGGCTTAATCCCCAGTGTGAGCTCTGGTAAATGTCATTTTCCCCCTTTAGAGCAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR TCA 90 bp | GAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTCCTTTTaGAGTTGTCCTCTTTTGTGTCCTCTGATGTTTATGGCTTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: EVLGTKPLQLSLISF*SCPLLCPLMFMALA Trigger: AGCTAAAGCCATAAACATCAGAGGACACAAAAGAGGACAACTTCAAAAGGAAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CCA 90 bp | TCCTTAGAGGTGAAGGTCACCTCAATACAGAAGTACTCTATGTATTaGACAGCTCTGGAAATACTGGCTCAAATCCCTAAGTTAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SLEVKVTSIQKYSMY*TALEILAQIPKLAA Trigger: GGCTGCTAACTTAGGGATTTGAGCCAGTATTTCCAGAGCTGTCCAATACATAGAGTACTTCTGTATTGAGGTGACCTTCACCTCTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR GCA 90 bp | TGGAATAGGCACGGCCAAGTATATACATGTCTTGTTCATCTTACCTaGCTTGTTCAGTCCCTCATTAAGTCTTCCTGTACAAGTATCAAT | + |
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Preference number: 1 (lower is better) Translates to: WNRHGQVYTCLVHLT*LVQSLIKSSCTSIN Trigger: ATTGATACTTGTACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGCCGTGCCTATTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CCA 90 bp | GAAGGAGTCAGAAACAATCTTTTCATGTCTGGAGCAGTAGAGTTGTaGGCTCATATATCTACTTCACTATCAAATCGCTTCCAAAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: EGVRNNLFMSGAVEL*AHISTSLSNRFQSD Trigger: ATCACTTTGGAAGCGATTTGATAGTGAAGTAGATATATGAGCCCACAACTCTACTGCTCCAGACATGAAAAGATTGTTTCTGACTCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR TCA 90 bp | AGCTTTCAGTGCAGTTTCAAACATGTTCACAACAAGCAAAACATTTaGGTATCTGGAATGACAGTATTGAACGGCACATGCTTCAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SFQCSFKHVHNKQNI*VSGMTVLNGTCFSV Trigger: AACACTGAAGCATGTGCCGTTCAATACTGTCATTCCAGATACTCAAATGTTTTGCTTGTTGTGAACATGTTTGAAACTGCACTGAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR GCA 90 bp | GAATTTACATGTGAAGCCATTTACAAAAGTAAAGATACAGACAGATaGAGCTTTCAGTGCAGTTTCAAACATGTTCACAACAAGCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: EFTCEAIYKSKDTDR*SFQCSFKHVHNKQN Trigger: GTTTTGCTTGTTGTGAACATGTTTGAAACTGCACTGAAAGCTGCATCTGTCTGTATCTTTACTTTTGTAAATGGCTTCACATGTAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTGTGCCCGTGTGTGTTaGCTGAGGAGGCAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRCARVC*LRRQKV Trigger: CACCTTCTGCCTCCTCAGGCAACACACACGGGCACA...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGAGGTGTCTGATCACCTaGAACTGGACCTACGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRRCLIT*NWTYGE Trigger: CTCCCCGTAGGTCCAGTTCCAGGTGATCAGACACCT...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCGCATCCCTGGAGATGTaGATGTGGGCCATCCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFASLEM*MWAIRP Trigger: AGGACGGATGGCCCACATCCACATCTCCAGGGATGC...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGCCACAGCTACACCACTaGGGTTTCCATTTCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRPQLHH*GFHFKQ Trigger: TTGTTTGAAATGGAAACCTCAGTGGTGTAGCTGTGG...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCTACCAGAGCTCACACTaGGGATTAAGCCCAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFYQSSH*GLSPDL Trigger: GAGATCTGGGCTTAATCCCCAGTGTGAGCTCTGGTA...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTTCTATCTTGCTAAGTaGCTCTACCATCTCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRFYLAK*LYHLCH Trigger: GTGACAGAGATGGTAGAGTCACTTAGCAAGATAGAA...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGAGATTTAGTATTTCTTaGGCTGGTAAAATGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRRFSIS*AGKMAQ Trigger: CTGAGCCATTTTACCAGCCCAAGAAATACTAAATCT...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCAAGTACTCTATGTATTaGACAGCTCTGGAAATACTG | + |
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Preference number: 2 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFKYSMY*TALEIL Trigger: CAGTATTTCCAGAGCTGTCCAATACATAGAGTACTT...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATGAGGCAGAAGGTGTCTaGTCACCTGGAACTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: QVLLSRFSISWAGKMAQDEAEGV*SPGTGP Trigger: AGGTCCAGTTCCAGGTGATCAGACACCTTCTGCCTC...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTCCCGTGTGTGTTGCCTaGGGAGGCAGAAGGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTIPVCVA*GGRRCL Trigger: CAGACACCTTCTGCCTCCTCAGGCAACACACACGGG...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGAGGCAGCTTGTGAGCTaGCACATGAAGTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSRFSISWAGKMAQDKSRRQLVS*HMKSWE Trigger: TTCCCAGGACTTCATGTGGCAGCTCACAAGCTGCCT...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CAA 90 bp | CCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTCCTTTTGAAGTaGTCCTCTTTTGTGTCCTCTGATGTTTATGGCTTTAGCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: PGNQTSPALPYFLLK*SSFVSSDVYGFSLL Trigger: AAGTAAGCTAAAGCCATAAACATCAGAGGACACAAAAGAGGACAACTTCAAAAGGAAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTAACTGTCAGCATCCCTaGAGATGTGGATGTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCNCQHP*RCGCGP Trigger: TGGCCCACATCCACATCTCCAGGGATGCTGACAGTT...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CAA 90 bp | ATAGGCACGGCCAAGTATATACATGTCTTGTTCATCTTACCTGCCTaGTTCAGTCCCTCATTAAGTCTTCCTGTACAAGTATCAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: IGTAKYIHVLFILPA*FSPSLSLPVQVSMR Trigger: TCTCATTGATACTTGTACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGCCGTGCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTCAGTGTCTTCAGGGTTaGGTTGAAGAGGGGGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTIQCLQG*VEEGVN Trigger: GTTTACCCCCTCTTCAACTCAACCCTGAAGACACTG...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAGGTACAGATCAAAATaGACAGAACCAACTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QVLLSRFSISWAGKMAQDRYRSK*TEPTVS Trigger: GCTGACAGTTGGTTCTGTTCATTTTGATCTGTACCT...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CAA 90 bp | AATAGTACTTACTATGGAATAGGCACGGCCAAGTATATACATGTCTaGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NSTYYGIGTAKYIHV*FILPALFSPSLSLP Trigger: AGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGCCGTGCCTATTCCATAGTAAGTACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGACAGGGAATAAAAGCTaGAAGACTGCAAACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSRFSISWAGKMAQDKSRTGNKS*KTANFL Trigger: AAGGAAGTTTGCAGTCTTGCAGCTTTTATTCCCTGT...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGAAAGATACAGACAGATaGAGCTTTCAGTGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LSRFSISWAGKMAQDKSRKDTDR*SFQCSF Trigger: GAAACTGCACTGAAAGCTGCATCTGTCTGTATCTTT...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTCTTGGGCTGGTAAAATaGCTCAGGATAAAAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTILGLVK*LRIKAG Trigger: GCCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAG...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CAA 90 bp | AATGAAGGAGTCAGAAACAATCTTTTCATGTCTGGAGCAGTAGAGTaGTGGGCTCATATATCTACTTCACTATCAAATCGCTTCCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: NEGVRNNLFMSGAVE*WAHISTSLSNRFQS Trigger: ACTTTGGAAGCGATTTGATAGTGAAGTAGATATATGAGCCCACAACTCTACTGCTCCAGACATGAAAAGATTGTTTCTGACTCCTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTGGGGGTAAACTTCTTTaGAAAGAGTCAGTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCGGKLL*KESVCF Trigger: GAAACAGACTGACTCTTTTCAAAGAAGTTTACCCCC...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTCTTCAGGGTTGAGTTaGAGAGGGGGTAAACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTISSGLS*RGGKLL Trigger: AAGAAGTTTACCCCCTCTTCAACTCAACCCTGAAGA...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTCCTGGCTTCAGGACTaGCATCCTTTAGAACCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTISWLQD*HPLEPL Trigger: TAAAGGTTCTAAAGGATGTCAGTCCTGAAGCCAGGA...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTGCATCGTCCAAAAACTaGCTTTATAAGAGGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCASSKN*LYKRSH Trigger: ATGACTCCTCTTATAAAGTCAGTTTTTGGACGATGC...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTGACACAGATAAAGAATaGATCCTCGCAGGAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCDTDKE*ILAGNF Trigger: GAAATTTCCTGCGAGGATTCATTCTTTATCTGTGTC...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTGTTCTAAGCTTTTGTTaGACAGGGAATAAAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTIVLSFC*TGNKSC Trigger: GCAGCTTTTATTCCCTGTGCAACAAAAGCTTAGAAC...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTTCTCCTTACCACAGCTaGAACTTCATTTATTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCSPYHS*NFIYSL Trigger: AAGAGAATAAATGAAGTTGCAGCTGTGGTAAGGAGA...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTATAACATATGACAGATaGCTTTCTAGGCTGAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TATRSFFISIWTIFVCVCITYDR*LSRLSL Trigger: TAGACTCAGCCTAGAAAGCCATCTGTCATATGTTAT...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CAA 90 bp | CAGTCCCTCATTAAGTCTTCCTGTACAAGTATCAATGAGAATATTTaGCTTCTGCATAATTTACTAAAGTTCTACAGAATCAGAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: QSLIKSSCTSINENI*LLHNLLKFYRIRGT Trigger: AGTGCCTCTGATTCTGTAGAACTTTAGTAAATTATGCAGAAGCAAAATATTCTCATTGATACTTGTACAGGAAGACTTAATGAGGGACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTAACAGATGTAATGAATaGCAACATCACAAAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTINRCNE*QHHKGT Trigger: AGTCCCTTTGTGATGTTGTCATTCATTACATCTGTT...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTAATTTGAGTTCTTTCTaGCTTTTGAATGAAGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KVNICTATRSFFISIWTINLSSF*LLNEGV Trigger: GACTCCTTCATTCAAAAGGCAGAAAGAACTCAAATT...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR TCA 72 bp | GTGTGTGTGCCCGTGTGTGTGCCCGTGTGTGTTGCCTaGGGAGGCAGAAGGTGTCTGATCACCTGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: VCVPVCVPVCVA*GGRRCLITWNW Trigger: CCAGTTCCAGGTGATCAGACACCTTCTGCCTCCTCAGGCAACACACACGGGCACACACACGGGCACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR TCA 72 bp | TTTGTCTGTGTATGTGTCATGGGTATGTGCAGGTGCTaGGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: FVCVCVMGMCRC*GQKEFPRAAVR Trigger: TCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCCATGACACATACACAGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CAA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGCTTGTTGATGGAAATTaGAGTTCTTTCTGCCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRLVDGN*SSFCLL Trigger: CAAAAGGCAGAAAGAACTCAAATTTCCATCAACAAG...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR CCA 72 bp | CAGATCAAAATGAACAGAACCAACTGTCAGCATCCCTaGAGATGTGGATGTGGGCCATCCGTCCTTAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QIKMNRTNCQHP*RCGCGPSVLRG Trigger: ACCTCTAAGGACGGATGGCCCACATCCACATCTCCAGGGATGCTGACAGTTGGTTCTGTTCATTTTGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCCTCCCTTATTTCCTTTaGAAGTTGTCCTCTTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFLPYFL*KLSSFV Trigger: CACAAAAGAGGACAACTTCAAAAGGAAATAAGGGAG...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| 3UTR GCA 72 bp | CACGGCCAAGTATATACATGTCTTGTTCATCTTACCTaGCTTGTTCAGTCCCTCATTAAGTCTTCCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: HGQVYTCLVHLT*LVQSLIKSSCT Trigger: TGTACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGCCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CCA 72 bp | GTGAAGGTCACCTCAATACAGAAGTACTCTATGTATTaGACAGCTCTGGAAATACTGGCTCAAATCCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKVTSIQKYSMY*TALEILAQIPK Trigger: CTTAGGGATTTGAGCCAGTATTTCCAGAGCTGTCCAATACATAGAGTACTTCTGTATTGAGGTGACCTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CCA 72 bp | CTAAAGGGGGAAAATGACATTTACCAGAGCTCACACTaGGGATTAAGCCCAGATCTCAATGCTAAACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LKGENDIYQSSH*GLSPDLNAKHS Trigger: AGAATGTTTAGCATTGAGATCTGGGCTTAATCCCCAGTGTGAGCTCTGGTAAATGTCATTTTCCCCCTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CCA 72 bp | ACCCGTGACCTACACAATACTGGTTTAGCACATGGCTaGTTCAATACCATGCTGGTAAATCAAAACTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRDLHNTGLAHG*FNTMLVNQNFS Trigger: GGAAAAGTTTTGATTTACCAGCATGGTATTGAACCAGCCATGTGCTAAACCAGTATTGTGTAGGTCACGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATTCTGGAATGACAGTATaGAACGGCACATGCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QVLLSRFSISWAGKMAQDSGMTV*NGTCFS Trigger: ACTGAAGCATGTGCCGTTCAATACTGTCATTCCAGA...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGGAAGTACTCTATGTATaGGACAGCTCTGGAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: LSRFSISWAGKMAQDKSREVLYV*DSSGNT Trigger: AGTATTTCCAGAGCTGTCCAATACATAGAGTACTTC...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTTTCATCTTACCTGCCTaGTTCAGTCCCTCATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TATRSFFISIWTIFVCVCFILPA*FSPSLS Trigger: ACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAA...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGTCATCATTTTCTATCTaGCTAAGTGACTCTACCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSRFSISWAGKMAQDKSRSSFSI*LSDSTI Trigger: GATGGTAGAGTCACTTAGCAAGATAGAAAATGATGA...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR TCA 72 bp | TTTCCATTTCAAACAAGTATGTCCTGGCTTCAGGACTaGCATCCTTTAGAACCTTTACCAAATTTCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FPFQTSMSWLQD*HPLEPLPNFCH Trigger: GTGACAGAAATTTGGTAAAGGTTCTAAAGGATGTCAGTCCTGAAGCCAGGACATACTTGTTTGAAATGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR TCA 72 bp | TGCAGTTTCAAACATGTTCACAACAAGCAAAACATTTaGGTATCTGGAATGACAGTATTGAACGGCACATGC | + |
|
Preference number: 3 (lower is better) Translates to: CSFKHVHNKQNI*VSGMTVLNGTC Trigger: GCATGTGCCGTTCAATACTGTCATTCCAGATACTCAAATGTTTTGCTTGTTGTGAACATGTTTGAAACTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CCA 72 bp | AGAAACAATCTTTTCATGTCTGGAGCAGTAGAGTTGTaGGCTCATATATCTACTTCACTATCAAATCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RNNLFMSGAVEL*AHISTSLSNRF Trigger: GAAGCGATTTGATAGTGAAGTAGATATATGAGCCCACAACTCTACTGCTCCAGACATGAAAAGATTGTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR TCA 72 bp | TCATATATCTACTTCACTATCAAATCGCTTCCAAAGTaGTCATACCATTTGACAGTGCTGCCAACAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SYIYFTIKSLPK*SYHLTVLPTTV Trigger: TACAGTTGTTGGCAGCACTGTCAAATGGTATGATCACTTTGGAAGCGATTTGATAGTGAAGTAGATATATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTCAACAAGCAAAACATTaGAGTATCTGGAATGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TATRSFFISIWTIFVCVCQQAKH*SIWNDS Trigger: ACTGTCATTCCAGATACTCAAATGTTTTGCTTGTTG...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTTATTTCCTTTTGAAGTaGTCCTCTTTTGTGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TATRSFFISIWTIFVCVCYFLLK*SSFVSS Trigger: AGAGGACACAAAAGAGGACAACTTCAAAAGGAAATA...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR GCA 72 bp | TACAAAAGTAAAGATACAGACAGATGCAGCTTTCAGTaGAGTTTCAAACATGTTCACAACAAGCAAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: YKSKDTDRCSFQ*SFKHVHNKQNI Trigger: AATGTTTTGCTTGTTGTGAACATGTTTGAAACTGCACTGAAAGCTGCATCTGTCTGTATCTTTACTTTTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGGGGCCGGACTGGCCCTaGCCTCGGGGGTCTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRGPDWP*PRGSSV Trigger: AACGGAAGACCCCCGAGGGCAGGGCCAGTCCGGCCC...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCCCAGAACCGTCGTGGTaGCCACTGCCCAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFPEPSW*PLPRAG Trigger: TCCGGCCCTGGGCAGTGGCCACCACGACGGTTCTGG...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTCTTCCGTTCACTGTTaGGCTTCAGGCCGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRSSVHC*ASGRWR Trigger: ACGCCAGCGGCCTGAAGCGCAACAGTGAACGGAAGA...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTTGTTTTTGGCTGCTTaGGCTCTGTCCAGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRLFLAA*ALSREL Trigger: GAGCTCTCTGGACAGAGCGCAAGCAGCCAAAAACAA...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTTGCCCAGGGCCGGACTaGCCCTGCCCTCGGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TATRSFFISIWTIFVCVCCPGPD*PCPRGS Trigger: AGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCA...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGAATAAACTGTGGAGATaGCATCAGAGGTTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRNKLWR*HQRFTV Trigger: AACCGTGAACCTCTGATGCCATCTCCACAGTTTATT...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCTTTGCTACTTCTGTCTaGGCATGGGCAGCATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFFATSV*AWAASQ Trigger: TTGTGATGCTGCCCATGCCCAGACAGAAGTAGCAAA...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTAGCATAGGTTGTTGCTaGTGCATGCACATGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFSIGCC*CMHMVP Trigger: AGGCACCATGTGCATGCAGCAGCAACAACCTATGCT...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCTCCATGTTTCCTCTCTaGACTTCAATAGTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFSMFPL*TSIVPM Trigger: CATGGGGACTATTGAAGTGCAGAGAGGAAACATGGA...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTCTTCTCATGGGCTTTTaGACGTCTAAAGAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFLLMGF*TSKEGF Trigger: AAAGCCCTCTTTAGACGTGCAAAAGCCCATGAGAAG...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTCCCTTAAGCATTGGTTaGGAAATTATATCATCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFPLSIG*EIISSV Trigger: CACCGATGATATAATTTCTCAACCAATGCTTAAGGG...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTGCCATGTATTTGCCTTaGGCATCTATTTCCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFAMYLP*ASISFE Trigger: TTCAAAGGAAATAGATGCTCAAGGCAAATACATGGC...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGTGTTGCCTTTGTTTTTaGCTGCTTGCGCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQCCLCF*LLALCP Trigger: TGGACAGAGCGCAAGCAGCCAAAAACAAAGGCAACA...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | GCTGGTAAAATGGCTCAGGATAAAAGCAGGCCTCTTTaGCTCTGTAGGCCTGACAACCCGAGTTCAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGKMAQDKSRPL*LCRPDNPSSIF Trigger: AAAGATTGAACTCGGGTTGTCAGGCCTACAGAGCAAAAGAGGCCTGCTTTTATCCTGAGCCATTTTACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTGCCTTCAGCACATCTTaGAAATTTCTTTATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFAFSTS*KFLYDL Trigger: GAGATCATAAAGAAATTTCCAAGATGTGCTGAAGGC...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGCCCCATGGTCTCATATaGAAAGTCACATTTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQPHGLI*KVTFVV Trigger: GACAACAAATGTGACTTTGCATATGAGACCATGGGG...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTCTCTCCCTTAAGCATTaGTTGAGAAATTATATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFLSLKH*LRNYII Trigger: GATGATATAATTTCTCAACCAATGCTTAAGGGAGAG...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGCCTTTCATAGCTGCCTaGACTTGCGAAGAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQPFIAA*TCEELF Trigger: AAACAATTCTTCGCAAGTCCAGGCAGCTATGAAAGG...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCTTGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCTGTAACTTCTGTCTGGGCATaGGCAGCATCACAAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVLFILPALFSPSLSLPVTSVWA*AASQSE Trigger: TTCACTTTGTGATGCTGCCCATGCCCAGACAGAAGT...TACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGCTTCTGCCATGTATTTaGCTTGAGCATCTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQLLPCI*LEHLFP Trigger: AGGAAATAGATGCTCAAGGCAAATACATGGCAGAAG...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATTGCCTGGCGATACAATaGAAAACACTTCTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLSRFSISWAGKMAQDCLAIQ*KTLLSL Trigger: CAGGCTCAGAAGTGTTTTGCATTGTATCGCCAGGCA...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGTGCCTGGGCATAAAGTaGATAGCCTTCAGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSISWAGKMAQDKSRCLGIK*IAFSTS Trigger: AGATGTGCTGAAGGCTATGCACTTTATGCCCAGGCA...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGATGCTCTGCTCATTTTaGAACCCTTCTAATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQMLCSF*NPSNIH Trigger: GTGTATATTAGAAGGGTTTCAAAATGAGCAGAGCAT...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCTTGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCTGTATTGTCTAGCTTCTCATaGGCTTTTGCACGTCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVLFILPALFSPSLSLPVLSSFS*AFARLK Trigger: CTTTAGACGTGCAAAAGCCCATGAGAAGCTAGACAA...TACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | TACTATGGAATAGGCACGGCCAAGTATATACATGTCTaGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: YYGIGTAKYIHV*FILPALFSPSL Trigger: TAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGCCGTGCCTATTCCATAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGTTACCAAACTGTTGTTaGTCTGTTAATGCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSISWAGKMAQDKSRLPNCC*SVNAWA Trigger: TGCCCAGGCATTAACAGATCAACAACAGTTTGGTAA...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTGGCAGCATCACAAAGTaGATACAGATGAGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TATRSFFISIWTIFVCVCGSITK*IQMSHL Trigger: GAGATGGCTCATCTGTATTCACTTTGTGATGCTGCC...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGACTTCTTTCCATTTTTaGAATTGTTCAAAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTANFLQQPRPLHLNMKQTSFHF*NCSKAA Trigger: TGCTGCCTTTGAACAATTGCAAAAATGGAAAGAAGT...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGCTTGATAAGGGCATTTaGTCGAAGCTTCACATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRFSISWAGKMAQDKSRLDKGI*SKLHIS Trigger: GCTAATGTGAAGCTTCGAGCAAATGCCCTTATCAAG...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAACCTTTCATAGCTaGCTGGACTTGCGAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QVLLSRFSISWAGKMAQDKTFHS*LDLRRI Trigger: AATTCTTCGCAAGTCCAGGCAGCTATGAAAGGTTTT...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | GCCAAGTATATACATGTCTTGTTCATCTTACCTGCCTaGTTCAGTCCCTCATTAAGTCTTCCTGTACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AKYIHVLFILPA*FSPSLSLPVQV Trigger: TACTTGTACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATGTATATACTTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | CTATATATCATCACATGTACTCCACCTGTACGTGGGTaGCTCACATACACCCACTTTCATTTAAAAGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LYIITCTPPVRG*LTYTHFHLKAY Trigger: GTATGCTTTTAAATGAAAGTGGGTGTATGTGAGCAACCCACGTACAGGTGGAGTACATGTGATGATATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | GTCAGAAACAATCTTTTCATGTCTGGAGCAGTAGAGTaGTGGGCTCATATATCTACTTCACTATCAAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VRNNLFMSGAVE*WAHISTSLSNR Trigger: GCGATTTGATAGTGAAGTAGATATATGAGCCCACAACTCTACTGCTCCAGACATGAAAAGATTGTTTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTCAAAGTGAATACAGATaGGCCATCTCCATTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVNICTATRSFFISIWTIQSEYR*AISISD Trigger: GTCGGAAATGGAGATGGCTCATCTGTATTCACTTTG...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTATATACACACAGCAGTaGCGTCTTCTAAACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVNICTATRSFFISIWTIIYTQQ*RLLNTP Trigger: AGGAGTGTTTAGAAGACGTCACTGCTGTGTGTATAT...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTGCCTTTGTACAATCTTaGGCCACTTCTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TATRSFFISIWTIFVCVCAFVQS*ATSFHF Trigger: AAAATGGAAAGAAGTGGCCCAAGATTGTACAAAGGC...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| 3UTR CAA 72 bp | CTGTGTATCAGTGATGTATTACTTGTTGATGGAAATTaGAGTTCTTTCTGCCTTTTGAATGAAGGAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCISDVLLVDGN*SSFCLLNEGVR Trigger: TCTGACTCCTTCATTCAAAAGGCAGAAAGAACTCAAATTTCCATCAACAAGTAATACATCACTGATACACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS GCA 90 bp | CCCCAGAACCGTCGTGGTGGCCACTGCCCAGGGCCGGACTGGCCCTaGCCTCGGGGGTCTTCCGTTCACTGTTGCGCTTCAGGCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQNRRGGHCPGPDWP*PRGSSVHCCASGRW Trigger: CCAGCGGCCTGAAGCGCAACAGTGAACGGAAGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCAGTGGCCACCACGACGGTTCTGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CCA 90 bp | GGGAGTCCCCAGAACCGTCGTGGTGGCCACTGCCCAGGGCCGGACTaGCCCTGCCCTCGGGGGTCTTCCGTTCACTGTTGCGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPQNRRGGHCPGPD*PCPRGSSVHCCASG Trigger: GCCTGAAGCGCAACAGTGAACGGAAGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCAGTGGCCACCACGACGGTTCTGGGGACTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTGTCTTCCGTTCACTGTaGCGCTTCAGGCCGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFVFRSL*RFRPLA Trigger: CGCCAGCGGCCTGAAGCGCAACAGTGAACGGAAGAC...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGAAACACTCCTTCTTATaGTCTAGCTTCTCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRKHSFL*SSFSWA Trigger: AGCCCATGAGAAGCTAGACAATAAGAAGGAGTGTTT...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | ACGTCTGAGTTCATAGGATCGATCTCGGCAGCCATGTTGAAGTCCTaGGTAGACAGCATAGGTTGTTGCTGCTGCATGCACATGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSEFIGSISAAMLKS*VDSIGCCCCMHMVP Trigger: AGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCTGCCGAGATCGATCCTATGAACTCAGACGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCCTTGCGAAGAATTGTTaGCTGTATATGCCTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFLAKNC*LYMPGD Trigger: ATCGCCAGGCATATACAGCAAACAATTCTTCGCAAG...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | GGGTATGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGGCTTTGAAATATTTGTaGCCTTTGTTTTTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYVQVLRSEGIPQGCSQRALKYL*PLFLAA Trigger: AGCAGCCAAAAACAAAGGCAACAAATATTTCAAAGC...CCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACATACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | CAGATCCAGCAGAATTTTCAGCTGTCCTCGGTGGTGATAAACGTCTaGGTTCATAGGATCGATCTCGGCAGCCATGTTGAAGTCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QIQQNFQLSSVVINV*VHRIDLGSHVEVLS Trigger: ACTCAGGACTTCAACATGGCTGCCGAGATCGATCCTATGAACTCAGACGTTTATCACCACCGAGGACAGCTGAAAATTCTGCTGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCACATGAAGTCCTGGGAACCAAACCTCTCCAGCTCTCCCTTATTTTCCGACTTGGCCAAGTaGATAGCTTTGTTGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: VSCHMKSWEPNLSSSPLFSDLAK*IALLNM Trigger: CATGTTCAACAAAGCTATCAACTTGGCCAAGTCGGA...AAATAAGGGAGAGCTGGAGAGGTTTGGTTCCCAGGACTTCATGTGGCAGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | TGTGCAGGTGCTGAGGTCAGAAGGAATTCCCCAGGGCTGCAGTCAGAGGTATTCTTAATCCGTATTTCTTaGCTACTTCTGTCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CAGAEVRRNSPGLQSEVFLIRIS*LLLSGH Trigger: ATGCCCAGACAGAAGTAGCAAAGAAATACGGATTAA...GAATACCTCTGACTGCAGCCCTGGGGAATTCCTTCTGACCTCAGCACCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | GCTACTTCTGTCTGGGCATGGGCAGCATCACAAAGTGAATACAGATaGGCCATCTCCATTTCCGACTTGGCCAAGTTGATAGCTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATSVWAWAASQSEYR*AISISDLAKLIALL Trigger: CAACAAAGCTATCAACTTGGCCAAGTCGGAAATGGAGATGGCTCATCTGTATTCACTTTGTGATGCTGCCCATGCCCAGACAGAAGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS GCA 90 bp | ACCTTTCATAGCTGCCTGGACTTGCGAAGAATTGTTTGCTGTATATaGCTGGCGATACAATGCAAAACACTTCTGAGCCTGCGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFHSCLDLRRIVCCI*LAIQCKTLLSLRQS Trigger: GCTTTGGCGCAGGCTCAGAAGTGTTTTGCATTGTATCGCCAGGCATATACAGCAAACAATTCTTCGCAAGTCCAGGCAGCTATGAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | GTATTTCTTTGCTACTTCTGTCTGGGCATGGGCAGCATCACAAAGTaGATACAGATGAGCCATCTCCATTTCCGACTTGGCCAAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VFLCYFCLGMGSITK*IQMSHLHFRLGQVD Trigger: ATCAACTTGGCCAAGTCGGAAATGGAGATGGCTCATCTGTATTCACTTTGTGATGCTGCCCATGCCCAGACAGAAGTAGCAAAGAAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS GCA 90 bp | TTGTTGCTGCTGCATGCACATGGTGCCTCTCTTGATAAGGGCATTTaGTCGAAGCTTCACATTAGCTTCCTTCAAACTGATGACCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLHAHGASLDKGI*SKLHISFLQTDDLI Trigger: GATAAGGTCATCAGTTTGAAGGAAGCTAATGTGAAGCTTCGAGCAAATGCCCTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCTTGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCTGTACACATGGTGCCTCTCTaGATAAGGGCATTTGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HVLFILPALFSPSLSLPVHMVPL*IRAFAR Trigger: TCGAGCAAATGCCCTTATCAAGAGAGGCACCATGTG...TACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | CAAAACACTTCTGAGCCTGCGCCAAAGCAAACTTTGGTCTTAATCTaGTACATGCATCAAAATCCGCCACTGCTTCTTCAACCAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNTSEPAPKQTLVLI*YMHQNPPLLLQPDP Trigger: TGGATCTGGTTGAAGAAGCAGTGGCGGATTTTGATGCATGTATCAGATTAAGACCAAAGTTTGCTTTGGCGCAGGCTCAGAAGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | AAGACTGCAAACTTCCTTCAACAGCCACGCCCACTACACCTAAACATGAAACAGAGGGCTTTCACATATTaGGGATTAAGTTCAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTANFLQQPRPLHLNMKQRAFTY*GLSSTA Trigger: GGCTGTTGAACTTAATCCCAAATATGTGAAAGCCCT...CTGTTTCATGTTTAGGTGTAGTGGGCGTGGCTGTTGAAGGAAGTTTGCAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGAGACAGCATAGGTTGTaGCTGCTGCATGCACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRFSISWAGKMAQDKSRRQHRL*LLHAHG Trigger: ACCATGTGCATGCAGCAGCAACAACCTATGCTGTCT...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCTTGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCTGTATGGACTTGCGAAGAATaGTTTGCTGTATATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HVLFILPALFSPSLSLPVWTCEE*FAVYAW Trigger: CCAGGCATATACAGCAAACAATTCTTCGCAAGTCCA...TACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CCA 90 bp | GCAGTGACGTCTTCTAAACACTCCTTCTTATTGTCTAGCTTCTCATaGGCTTTTGCACGTCTAAAGAGGGCTTTCACATATTTGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: AVTSSKHSFLLSSFS*AFARLKRAFTYLGL Trigger: TAATCCCAAATATGTGAAAGCCCTCTTTAGACGTGCAAAAGCCCATGAGAAGCTAGACAATAAGAAGGAGTGTTTAGAAGACGTCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAGCCTTTGTACAATCTaGGGCCACTTCTTTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLLSRFSISWAGKMAQDSLCTI*GHFFPF Trigger: AAATGGAAAGAAGTGGCCCAAGATTGTACAAAGGCT...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTCATAGCTGCCTGGACTaGCGAAGAATTGTTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TATRSFFISIWTIFVCVCHSCLD*RRIVCC Trigger: ACAGCAAACAATTCTTCGCAAGTCCAGGCAGCTATG...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCTTGTTCATCTTACCTGCCTTGTTCAGTCCCTCATTAAGTCTTCCTGTAACCTTTATCCAAATCTaGCTTCCACTGAAGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HVLFILPALFSPSLSLPVTFIQI*LPLKLK Trigger: CTTCAACTTCAGTGGAAGCAAGATTTGGATAAAGGT...TACAGGAAGACTTAATGAGGGACTGAACAAGGCAGGTAAGATGAACAAGACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATAAAAGCAGGTTTCCATTTTTGCAATaGTTCAAAGGCAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRFSISWAGKMAQDKSRFPFLQ*FKGSSS Trigger: AGAGCTGCTGCCTTTGAACAATTGCAAAAATGGAAA...CCTGCTTTTATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTTCTCAGTAGATTTAGTATTTCTTGGGCTGGTAAAATGGCTCAGGATTCCCTTAAGCATTGGTaGAGAAATTATATCATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QVLLSRFSISWAGKMAQDSLKHW*RNYIIG Trigger: ACCGATGATATAATTTCTCAACCAATGCTTAAGGGA...ATCCTGAGCCATTTTACCAGCCCAAGAAATACTAAATCTACTGAGAAGAACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 90 bp | AGAAGTTTAAGAACTTTATCAGCTAACAGCATGCTCTGCTCATTTTaGAACCCTTCTAATATACACACAGCAGTGACGTCTTCTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSLRTLSANSMLCSF*NPSNIHTAVTSSKH Trigger: GTGTTTAGAAGACGTCACTGCTGTGTGTATATTAGAAGGGTTTCAAAATGAGCAGAGCATGCTGTTAGCTGATAAAGTTCTTAAACTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CCA 90 bp | ATCATCGGTGAAAGAACTGAAGTAAGATTTAATAAACTGTGGAGATaGCATCAGAGGTTCACGGTTCTTGTATTTTTCTTTGGCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IIGERTEVRFNKLWR*HQRFTVLVFFFGIL Trigger: GAGAATGCCAAAGAAAAATACAAGAACCGTGAACCTCTGATGCCATCTCCACAGTTTATTAAATCTTACTTCAGTTCTTTCACCGATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTTCAATTTCAATAGCCTaGCTGATAAGCTCCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TATRSFFISIWTIFVCVCSISIA*LISSKP Trigger: AGGTTTGGAGCTTATCAGCAAGGCTATTGAAATTGA...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | AAAGTGAATATCTGTACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTGCCAAGTTGATAGCTTaGTTGAACATGTCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVNICTATRSFFISIWTIAKLIA*LNMSMA Trigger: AGCCATTGACATGTTCAACAAAGCTATCAACTTGGC...AATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGTACAGATATTCACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCACCAGGAGTTTCTTTATAAGCATTTGGACTATTTTTGTCTGTGTATGTAAGTTGATAGCTTTGTaGAACATGTCAATGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TATRSFFISIWTIFVCVCKLIAL*NMSMAF Trigger: GAAAGCCATTGACATGTTCAACAAAGCTATCAACTT...ACATACACAGACAAAAATAGTCCAAATGCTTATAAAGAAACTCCTGGTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CCA 90 bp | AATTATATCATCGGTGAAAGAACTGAAGTAAGATTTAATAAACTGTaGAGATGGCATCAGAGGTTCACGGTTCTTGTATTTTTCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NYIIGERTEVRFNKL*RWHQRFTVLVFFFG Trigger: GCCAAAGAAAAATACAAGAACCGTGAACCTCTGATGCCATCTCCACAGTTTATTAAATCTTACTTCAGTTCTTTCACCGATGATATAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS GCA 72 bp | TTTCCAGGGAGTCCCCAGAACCGTCGTGGTGGCCACTaGCCAGGGCCGGACTGGCCCTGCCCTCGGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPGSPQNRRGGH*PGPDWPCPRGS Trigger: AGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCAGTGGCCACCACGACGGTTCTGGGGACTCCCTGGAAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS GCA 72 bp | CGTCGTGGTGGCCACTGCCCAGGGCCGGACTGGCCCTaGCCTCGGGGGTCTTCCGTTCACTGTTGCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRGGHCPGPDWP*PRGSSVHCCAS Trigger: TGAAGCGCAACAGTGAACGGAAGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCAGTGGCCACCACGACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CCA 72 bp | CAGAACCGTCGTGGTGGCCACTGCCCAGGGCCGGACTaGCCCTGCCCTCGGGGGTCTTCCGTTCACTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QNRRGGHCPGPD*PCPRGSSVHCC Trigger: GCAACAGTGAACGGAAGACCCCCGAGGGCAGGGCCAGTCCGGCCCTGGGCAGTGGCCACCACGACGGTTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 90 bp | GATCTCGGCAGCCATGTTGAAGTCCTGAGTAGACAGCATAGGTTGTaGCTGCTGCATGCACATGGTGCCTCTCTTGATAAGGGCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLGSHVEVLSRQHRL*LLHAHGASLDKGIC Trigger: GCAAATGCCCTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCTGCCGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 72 bp | GGCAGCCATGTTGAAGTCCTGAGTAGACAGCATAGGTaGTTGCTGCTGCATGCACATGGTGCCTCTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSHVEVLSRQHR*LLLHAHGASLD Trigger: ATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 90 bp | ATCGATCTCGGCAGCCATGTTGAAGTCCTGAGTAGACAGCATAGGTaGTTGCTGCTGCATGCACATGGTGCCTCTCTTGATAAGGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: IDLGSHVEVLSRQHR*LLLHAHGASLDKGI Trigger: AATGCCCTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCTGCCGAGATCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 72 bp | TTCATAGGATCGATCTCGGCAGCCATGTTGAAGTCCTaGGTAGACAGCATAGGTTGTTGCTGCTGCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FIGSISAAMLKS*VDSIGCCCCMH Trigger: GTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCTGCCGAGATCGATCCTATGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 72 bp | GTCTGGGCATGGGCAGCATCACAAAGTGAATACAGATaGGCCATCTCCATTTCCGACTTGGCCAAGTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: VWAWAASQSEYR*AISISDLAKLI Trigger: TATCAACTTGGCCAAGTCGGAAATGGAGATGGCTCATCTGTATTCACTTTGTGATGCTGCCCATGCCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 72 bp | AGCCATGTTGAAGTCCTGAGTAGACAGCATAGGTTGTaGCTGCTGCATGCACATGGTGCCTCTCTTGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SHVEVLSRQHRL*LLHAHGASLDK Trigger: CTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTACTCAGGACTTCAACATGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 90 bp | GCTTGCTCGTATTTTCCTGCTTTGAAATATTTGTTGCCTTTGTTTTaGGCTGCTTGCGCTCTGTCCAGAGAGCTCATTTCCAGGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACSYFPALKYLLPLF*AACALSRELISRES Trigger: GGACTCCCTGGAAATGAGCTCTCTGGACAGAGCGCAAGCAGCCAAAAACAAAGGCAACAAATATTTCAAAGCAGGAAAATACGAGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS CAA 90 bp | GTAGACAGCATAGGTTGTTGCTGCTGCATGCACATGGTGCCTCTCTaGATAAGGGCATTTGCTCGAAGCTTCACATTAGCTTCCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VDSIGCCCCMHMVPL*IRAFARSFTLASFK Trigger: TTTGAAGGAAGCTAATGTGAAGCTTCGAGCAAATGCCCTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTATGCTGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
||
| CDS TCA 72 bp | CAGAATTTTCAGCTGTCCTCGGTGGTGATAAACGTCTaGGTTCATAGGATCGATCTCGGCAGCCATGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QNFQLSSVVINV*VHRIDLGSHVE Trigger: TTCAACATGGCTGCCGAGATCGATCCTATGAACTCAGACGTTTATCACCACCGAGGACAGCTGAAAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS GCA 72 bp | AGCTGCCTGGACTTGCGAAGAATTGTTTGCTGTATATaGCTGGCGATACAATGCAAAACACTTCTGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SCLDLRRIVCCI*LAIQCKTLLSL Trigger: CAGGCTCAGAAGTGTTTTGCATTGTATCGCCAGGCATATACAGCAAACAATTCTTCGCAAGTCCAGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 72 bp | ATAGGTTGTTGCTGCTGCATGCACATGGTGCCTCTCTaGATAAGGGCATTTGCTCGAAGCTTCACATTAGCT | + |
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Preference number: 6 (lower is better) Translates to: IGCCCCMHMVPL*IRAFARSFTLA Trigger: AGCTAATGTGAAGCTTCGAGCAAATGCCCTTATCAAGAGAGGCACCATGTGCATGCAGCAGCAACAACCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS TCA 72 bp | GCTGTATATGCCTGGCGATACAATGCAAAACACTTCTaGGCCTGCGCCAAAGCAAACTTTGGTCTTAATCTG | + |
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Preference number: 6 (lower is better) Translates to: AVYAWRYNAKHF*ACAKANFGLNL Trigger: CAGATTAAGACCAAAGTTTGCTTTGGCGCAGGCTCAGAAGTGTTTTGCATTGTATCGCCAGGCATATACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS GCA 72 bp | CTGCATGCACATGGTGCCTCTCTTGATAAGGGCATTTaGTCGAAGCTTCACATTAGCTTCCTTCAAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: LHAHGASLDKGI*SKLHISFLQTD Trigger: ATCAGTTTGAAGGAAGCTAATGTGAAGCTTCGAGCAAATGCCCTTATCAAGAGAGGCACCATGTGCATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS TCA 72 bp | TCTGAGCCTGCGCCAAAGCAAACTTTGGTCTTAATCTaGTACATGCATCAAAATCCGCCACTGCTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SEPAPKQTLVLI*YMHQNPPLLLQ Trigger: TTGAAGAAGCAGTGGCGGATTTTGATGCATGTATCAGATTAAGACCAAAGTTTGCTTTGGCGCAGGCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 72 bp | CACACAGCAGTGACGTCTTCTAAACACTCCTTCTTATaGTCTAGCTTCTCATGGGCTTTTGCACGTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: HTAVTSSKHSFL*SSFSWAFARLK Trigger: CTTTAGACGTGCAAAAGCCCATGAGAAGCTAGACAATAAGAAGGAGTGTTTAGAAGACGTCACTGCTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 90 bp | AGCTTCTCATGGGCTTTTGCACGTCTAAAGAGGGCTTTCACATATTaGGGATTAAGTTCAACAGCCTTTGTACAATCTTGGGCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SFSWAFARLKRAFTY*GLSSTAFVQSWATS Trigger: AGAAGTGGCCCAAGATTGTACAAAGGCTGTTGAACTTAATCCCAAATATGTGAAAGCCCTCTTTAGACGTGCAAAAGCCCATGAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 72 bp | TCAAAACCTTTCATAGCTGCCTGGACTTGCGAAGAATaGTTTGCTGTATATGCCTGGCGATACAATGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SKPFIAAWTCEE*FAVYAWRYNAK Trigger: TTTTGCATTGTATCGCCAGGCATATACAGCAAACAATTCTTCGCAAGTCCAGGCAGCTATGAAAGGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 90 bp | TGCACTTCAATAGTCCCCATGGTCTCATATGCAAAGTCACATTTGTaGTCAATTTCAATAGCCTTGCTGATAAGCTCCAAACCTTTATCC | + |
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Preference number: 6 (lower is better) Translates to: CTSIVPMVSYAKSHL*SISIALLISSKPLS Trigger: GGATAAAGGTTTGGAGCTTATCAGCAAGGCTATTGAAATTGACAACAAATGTGACTTTGCATATGAGACCATGGGGACTATTGAAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 90 bp | CTCTGCACTTCAATAGTCCCCATGGTCTCATATGCAAAGTCACATTaGTTGTCAATTTCAATAGCCTTGCTGATAAGCTCCAAACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LCTSIVPMVSYAKSH*LSISIALLISSKPL Trigger: TAAAGGTTTGGAGCTTATCAGCAAGGCTATTGAAATTGACAACAAATGTGACTTTGCATATGAGACCATGGGGACTATTGAAGTGCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS TCA 72 bp | AGAACTTTATCAGCTAACAGCATGCTCTGCTCATTTTaGAACCCTTCTAATATACACACAGCAGTGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTLSANSMLCSF*NPSNIHTAVTS Trigger: AGACGTCACTGCTGTGTGTATATTAGAAGGGTTTCAAAATGAGCAGAGCATGCTGTTAGCTGATAAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CCA 72 bp | TCTTCTAAACACTCCTTCTTATTGTCTAGCTTCTCATaGGCTTTTGCACGTCTAAAGAGGGCTTTCACATAT | + |
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Preference number: 6 (lower is better) Translates to: SSKHSFLLSSFS*AFARLKRAFTY Trigger: ATATGTGAAAGCCCTCTTTAGACGTGCAAAAGCCCATGAGAAGCTAGACAATAAGAAGGAGTGTTTAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 72 bp | ATAGTCCCCATGGTCTCATATGCAAAGTCACATTTGTaGTCAATTTCAATAGCCTTGCTGATAAGCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IVPMVSYAKSHL*SISIALLISSK Trigger: TTTGGAGCTTATCAGCAAGGCTATTGAAATTGACAACAAATGTGACTTTGCATATGAGACCATGGGGACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CAA 72 bp | TATGCAAAGTCACATTTGTTGTCAATTTCAATAGCCTaGCTGATAAGCTCCAAACCTTTATCCAAATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: YAKSHLLSISIA*LISSKPLSKSC Trigger: GCAAGATTTGGATAAAGGTTTGGAGCTTATCAGCAAGGCTATTGAAATTGACAACAAATGTGACTTTGCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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| CDS CCA 72 bp | GAAAGAACTGAAGTAAGATTTAATAAACTGTGGAGATaGCATCAGAGGTTCACGGTTCTTGTATTTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ERTEVRFNKLWR*HQRFTVLVFFF Trigger: AAAGAAAAATACAAGAACCGTGAACCTCTGATGCCATCTCCACAGTTTATTAAATCTTACTTCAGTTCTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166897.3 |
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