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Pregenerated sensors for TOMM7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028998

Ensembl transcript IDs: ENSMUST00000030851.7

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGATCAAGGCAGACCAGACAGATAGCTTCAGTGGGTCAAAACATCTaGTACCAAGTTACCTCCTCAGACCACATGGTAGAAGGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: RSRQTRQIASVGQNI*YQVTSSDHMVEGEN
Trigger: GTTCTCTCCTTCTACCATGTGGTCTGAGGAGGTAACTTGGTAGCAGATGTTTTGACCCACTGAAGCTATCTGTCTGGTCTGCCTTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR GCA 90 bp GGGAGAAAGTGCTGTATTGAGCCTCGGCCAAAGCCAGCTCTACTTTaGTTACACCTGAAGAAAATTCTAGACTCATTTAATCTACAAATA +
Preference number: 1 (lower is better)
Translates to: GRKCCIEPRPKPALL*LHLKKILDSFNLQI
Trigger: TATTTGTAGATTAAATGAGTCTAGAATTTTCTTCAGGTGTAAGCAAAGTAGAGCTGGCTTTGGCCGAGGCTCAATACAGCACTTTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR TCA 72 bp CGTCCAAGATGTCCAAAACTGACATGCCTCCTCTCCTaGCTTGGAACGTTTCTGAGGCTGATGATCTGCAAA +
Preference number: 3 (lower is better)
Translates to: RPRCPKLTCLLS*LGTFLRLMICK
Trigger: TTTGCAGATCATCAGCCTCAGAAACGTTCCAAGTCAGGAGAGGAGGCATGTCAGTTTTGGACATCTTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR TCA 72 bp ATCAGTATAGGCTCCTCCACTCTGCCACAGAATCGTTaGAATGACGTCTCCTTTCTTGTCCAGCTGGAGTAT +
Preference number: 3 (lower is better)
Translates to: ISIGSSTLPQNR*NDVSFLVQLEY
Trigger: ATACTCCAGCTGGACAAGAAAGGAGACGTCATTTCAACGATTCTGTGGCAGAGTGGAGGAGCCTATACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR GCA 72 bp CAGACCAGACAGATAGCTTCAGTGGGTCAAAACATCTaGTACCAAGTTACCTCCTCAGACCACATGGTAGAA +
Preference number: 3 (lower is better)
Translates to: QTRQIASVGQNI*YQVTSSDHMVE
Trigger: TTCTACCATGTGGTCTGAGGAGGTAACTTGGTAGCAGATGTTTTGACCCACTGAAGCTATCTGTCTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR CCA 72 bp CCTTTCTTGTCCAGCTGGAGTATACACCTTCCATGTTaGATCGCGTCCAAATCCAGATGTTCAAACAGTCCT +
Preference number: 3 (lower is better)
Translates to: PFLSSWSIHLPC*IASKSRCSNSP
Trigger: AGGACTGTTTGAACATCTGGATTTGGACGCGATCCAACATGGAAGGTGTATACTCCAGCTGGACAAGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR CCA 72 bp AAGATGTCCAAAACTGACATGCCTCCTCTCCTGACTTaGAACGTTTCTGAGGCTGATGATCTGCAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: KMSKTDMPPLLT*NVSEADDLQKG
Trigger: TCCCTTTTGCAGATCATCAGCCTCAGAAACGTTCCAAGTCAGGAGAGGAGGCATGTCAGTTTTGGACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR GCA 72 bp ATTCCATTAGCTGTCTTTTCTTCTACTGGGAGAAAGTaGTGTATTGAGCCTCGGCCAAAGCCAGCTCTACTT +
Preference number: 3 (lower is better)
Translates to: IPLAVFSSTGRK*CIEPRPKPALL
Trigger: AAGTAGAGCTGGCTTTGGCCGAGGCTCAATACAGCACTTTCTCCCAGTAGAAGAAAAGACAGCTAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR CCA 72 bp AGAATCGTTGAAATGACGTCTCCTTTCTTGTCCAGCTaGAGTATACACCTTCCATGTTGGATCGCGTCCAAA +
Preference number: 3 (lower is better)
Translates to: RIVEMTSPFLSS*SIHLPCWIASK
Trigger: TTTGGACGCGATCCAACATGGAAGGTGTATACTCCAGCTGGACAAGAAAGGAGACGTCATTTCAACGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
CDS-3UTR TCA 90 bp GAGTATACACCTTCCATGTTGGATCGCGTCCAAATCCAGATGTTCAAACAGTCCCAAACTGGCCGCCCTTaGAGAGCTGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EYTPSMLDRVQIQMFKQSQTGRP*RAAAAS
Trigger: AGAGGCTGCAGCAGCTCTTCAAGGGCGGCCAGTTTG...GGACTGTTTGAACATCTGGATTTGGACGCGATCCAACATGGAAGGTGTATACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
CDS-3UTR GCA 90 bp CTTGGAACGTTTCTGAGGCTGATGATCTGCAAAAGGGAACTGCACCTGACAAATAGGCATTCCAGGATCTaGACCCCTTGTAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LGTFLRLMICKRELHLTNRHSRI*TPCKSQ
Trigger: CTGGGATTTACAAGGGGTGCAGATCCTGGAATGCCT...ATTTGTCAGGTGCAGTTCCCTTTTGCAGATCATCAGCCTCAGAAACGTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7
3UTR CAA 72 bp TCCTTTCTTGTCCAGCTGGAGTATACACCTTCCATGTaGGATCGCGTCCAAATCCAGATGTTCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: SFLVQLEYTPSM*DRVQIQMFKQS
Trigger: GGACTGTTTGAACATCTGGATTTGGACGCGATCCAACATGGAAGGTGTATACTCCAGCTGGACAAGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030851.7