Pregenerated sensors for TOMM6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033475

Ensembl transcript IDs: ENSMUST00000113301.2, ENSMUST00000113302.10

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GGTAGGATCTTGTGGTCACAGACAGTAGGCTGTCTTTGGAAAGTCTaGATACACAGGAGTTCCATTCTCTGTAAGCAGATAACAGCATCA	+
Preference number: 1 (lower is better) Translates to: GRILWSQTVGCLWKV*IHRSSILCKQITAS Trigger: TGATGCTGTTATCTGCTTACAGAGAATGGAACTCCTGTGTATTCAGACTTTCCAAAGACAGCCTACTGTCTGTGACCACAAGATCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113301.2
3UTR CAA 90 bp	TTACTACTCTTCAGGACAAGGGCAAGGACCATCTTCTGCAGAAAGTaGGGAACTGCACACAGAACCGTGCAGAGGCAACATCTCAGCCGA	+
Preference number: 2 (lower is better) Translates to: LLLFRTRARTIFCRK*GTAHRTVQRQHLSR Trigger: TCGGCTGAGATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGATGGTCCTTGCCCTTGTCCTGAAGAGTAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR-3UTR TCA 90 bp	GGAACTGCACACAGAACCGTGCAGAGGCAACATCTCAGCCGACACTGGGGGATGTGTCTTTGGAAAGTCTaGATACACAGGAGTTCCATT	+
Preference number: 2 (lower is better) Translates to: GTAHRTVQRQHLSRHWGMCLWKV*IHRSSI Trigger: AATGGAACTCCTGTGTATTCAGACTTTCCAAAGACA...CATCCCCCAGTGTCGGCTGAGATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR-3UTR TCA 90 bp	AGGCTTTATTTGAAATCTTTTTCAAGAACCATTACTACTCTTCAGGACAAGGGCTGTCTTTGGAAAGTCTaGATACACAGGAGTTCCATT	+
Preference number: 2 (lower is better) Translates to: RLYLKSFSRTITTLQDKGCLWKV*IHRSSI Trigger: AATGGAACTCCTGTGTATTCAGACTTTCCAAAGACA...GCCCTTGTCCTGAAGAGTAGTAATGGTTCTTGAAAAAGATTTCAAATAAAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR GCA 72 bp	TCTTCTGCAGAAAGTTGGGAACTGCACACAGAACCGTaGAGAGGCAACATCTCAGCCGACACTGGGGGATGG	+
Preference number: 3 (lower is better) Translates to: SSAESWELHTEP*RGNISADTGGW Trigger: CCATCCCCCAGTGTCGGCTGAGATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR GCA 72 bp	AAGGGCAAGGACCATCTTCTGCAGAAAGTTGGGAACTaGACACAGAACCGTGCAGAGGCAACATCTCAGCCG	+
Preference number: 3 (lower is better) Translates to: KGKDHLLQKVGN*TQNRAEATSQP Trigger: CGGCTGAGATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGATGGTCCTTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR CCA 72 bp	TCAGGACAAGGGCAAGGACCATCTTCTGCAGAAAGTTaGGAACTGCACACAGAACCGTGCAGAGGCAACATC	+
Preference number: 3 (lower is better) Translates to: SGQGQGPSSAES*ELHTEPCRGNI Trigger: GATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGATGGTCCTTGCCCTTGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR TCA 72 bp	TTGTGGTCACAGACAGTAGGCTGTCTTTGGAAAGTCTaGATACACAGGAGTTCCATTCTCTGTAAGCAGATA	+
Preference number: 3 (lower is better) Translates to: LWSQTVGCLWKV*IHRSSILCKQI Trigger: TATCTGCTTACAGAGAATGGAACTCCTGTGTATTCAGACTTTCCAAAGACAGCCTACTGTCTGTGACCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113301.2
3UTR-3UTR CAA 90 bp	CAGGCTTTATTTGAAATCTTTTTCAAGAACCATTACTACTCTTCAGGACAAGGGATCTTCTGCAGAAAGTaGGGAACTGCACACAGAACC	+
Preference number: 3 (lower is better) Translates to: QALFEIFFKNHYYSSGQGIFCRK*GTAHRT Trigger: GGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGAT...CCCTTGTCCTGAAGAGTAGTAATGGTTCTTGAAAAAGATTTCAAATAAAGCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
CDS-3UTR TCA 90 bp	CTTGTGGTCACAGACAGTAGGCTGTCTTTGGAAAGTCTGAATACACAGGAGTTCGTTGTCTGGAACCTCTaGGGCCTCGCTGGCCGACCC	+
Preference number: 4 (lower is better) Translates to: LVVTDSRLSLESLNTQEFVVWNL*GLAGRP Trigger: GGGTCGGCCAGCGAGGCCTCAGAGGTTCCAGACAAC...GAACTCCTGTGTATTCAGACTTTCCAAAGACAGCCTACTGTCTGTGACCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
3UTR CAA 72 bp	TTCAGGACAAGGGCAAGGACCATCTTCTGCAGAAAGTaGGGAACTGCACACAGAACCGTGCAGAGGCAACAT	+
Preference number: 4 (lower is better) Translates to: FRTRARTIFCRK*GTAHRTVQRQH Trigger: ATGTTGCCTCTGCACGGTTCTGTGTGCAGTTCCCAACTTTCTGCAGAAGATGGTCCTTGCCCTTGTCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
CDS-3UTR TCA 90 bp	AGGCTTTATTTGAAATCTTTTTCAAGAACCATTACTACTCTTCAGGACAAGGGCGTTGTCTGGAACCTCTaGGGCCTCGCTGGCCGACCC	+
Preference number: 4 (lower is better) Translates to: RLYLKSFSRTITTLQDKGVVWNL*GLAGRP Trigger: GGGTCGGCCAGCGAGGCCTCAGAGGTTCCAGACAAC...GCCCTTGTCCTGAAGAGTAGTAATGGTTCTTGAAAAAGATTTCAAATAAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
CDS TCA 90 bp	GCGGAAGACACCGCGGAGCCAGTCTCCCACGTTGTCTGGAACCTCTaGGGCCTCGCTGGCCGACCCGGCGGCGCTCACCGTCACTCCGCT	+
Preference number: 5 (lower is better) Translates to: AEDTAEPVSHVVWNL*GLAGRPGGAHRHSA Trigger: AGCGGAGTGACGGTGAGCGCCGCCGGGTCGGCCAGCGAGGCCTCAGAGGTTCCAGACAACGTGGGAGACTGGCTCCGCGGTGTCTTCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10
CDS CCA 72 bp	AGTCTCCCACGTTGTCTGGAACCTCTGAGGCCTCGCTaGCCGACCCGGCGGCGCTCACCGTCACTCCGCTGG	+
Preference number: 6 (lower is better) Translates to: SLPRCLEPLRPR*PTRRRSPSLRW Trigger: CCAGCGGAGTGACGGTGAGCGCCGCCGGGTCGGCCAGCGAGGCCTCAGAGGTTCCAGACAACGTGGGAGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113301.2 ENSMUST00000113302.10