Pregenerated sensors for TOMM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078713Ensembl transcript IDs: ENSMUST00000107807.2, ENSMUST00000107808.3, ENSMUST00000107809.9, ENSMUST00000107810.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGACTTCACAAATAACACTTTGAACAGAAGTGGTAAACAGAAATaGCTCCCCTTAGAGCCTGACATTATTAACCACTCCATCAACACT | + |
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Preference number: 1 (lower is better) Translates to: TDFTNNTLNRSGKQK*LPLEPDIINHSINT Trigger: AGTGTTGATGGAGTGGTTAATAATGTCAGGCTCTAAGGGGAGTCATTTCTGTTTACCACTTCTGTTCAAAGTGTTATTTGTGAAGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTCACTGGGCCAATTCAGCTaGAGACAGGAGGAGAAGCCG | + |
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Preference number: 2 (lower is better) Translates to: SFCTSQVALYFSYGGQFSLGQFS*RQEEKP Trigger: CGGCTTCTCCTCCTGTCTGCAGCTGAATTGGCCCAG...TGAGAACTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTCAAAGCAGGTCTTCATGCCATaGATCCACCTGACTGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: FCTSQVALYFSYGGQFSKQVFMP*IHLTAR Trigger: ACGGGCAGTCAGGTGGATGCATGGCATGAAGACCTG...CTTTGAGAACTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR GCA 90 bp | AAGACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGCAGGTCTTCATGCCATaGATCCACCTGACTGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: KTSFCTSQVALYFSYGGQQVFMP*IHLTAR Trigger: ACGGGCAGTCAGGTGGATGCATGGCATGAAGACCTG...CTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR GCA 90 bp | GAACACAAGACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGACTGGGCCAATTCAGCTaGAGACAGGAGGAGAAGCCG | + |
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Preference number: 2 (lower is better) Translates to: EHKTSFCTSQVALYFSYGLGQFS*RQEEKP Trigger: CGGCTTCTCCTCCTGTCTGCAGCTGAATTGGCCCAG...TCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGTCTTGTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR GCA 90 bp | ACCATGAACACAAGACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGCATCCACCTGACTaGCCGTCCTCAGATGCTATC | + |
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Preference number: 2 (lower is better) Translates to: TMNTRHLFALPKWLYISAMHPPD*PSSDAI Trigger: GATAGCATCTGAGGACGGGCAGTCAGGTGGATGCAT...AGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGTCTTGTGTTCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGTATGCTGACTTCCAAACAGACTTCACAAATAACACTTTGAACAGAAGTCACAAGACATCTTTTTaGACTTCCCAAGTGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: WVYADFQTDFTNNTLNRSHKTSF*TSQVAL Trigger: TAAAGCCACTTGGGAAGTGCAAAAAGATGTCTTGTG...ACTTCTGTTCAAAGTGTTATTTGTGAAGTCTGTTTGGAAGTCAGCATACACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR CAA 90 bp | GTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTCAAAGTCCTACTaGTTCTCAACAAGTAGTTTATATGTCCGTTTAATCAGCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: VALYFSYGGQFSKSY*FSTSSLYVRLISLT Trigger: TGTAAGGCTGATTAAACGGACATATAAACTACTTGTTGAGAACAAGTAGGACTTTGAGAACTGACCTCCATAGCTGAAATATAAAGCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGACTTCCAAACAGACTTCACAAATAACACTTTGAACAGAAGTGGTAAACAGTTTATATTTCAGCTATaGAGGTCAGTTCTCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ADFQTDFTNNTLNRSGKQFIFQL*RSVLKV Trigger: GACTTTGAGAACTGACCTCCATAGCTGAAATATAAA...CTGTTTACCACTTCTGTTCAAAGTGTTATTTGTGAAGTCTGTTTGGAAGTCAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR TCA 72 bp | CTCACAGGGGTGGAGTTCATGGGCCTAAGGGCACCATaGACACAAGACATCTTTTTGCACTTCCCAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LTGVEFMGLRAP*TQDIFLHFPSG Trigger: GCCACTTGGGAAGTGCAAAAAGATGTCTTGTGTTCATGGTGCCCTTAGGCCCATGAACTCCACCCCTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR TCA 72 bp | ACAAATAACACTTTGAACAGAAGTGGTAAACAGAAATaGCTCCCCTTAGAGCCTGACATTATTAACCACTCC | + |
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Preference number: 3 (lower is better) Translates to: TNNTLNRSGKQK*LPLEPDIINHS Trigger: GGAGTGGTTAATAATGTCAGGCTCTAAGGGGAGTCATTTCTGTTTACCACTTCTGTTCAAAGTGTTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR CCA 90 bp | TCACCAGGTCTTCATGCCATGCATCCACCTGACTGCCCGTCCTCAGATGCTATCCCTCCGGGTCCAACTTaGGCGCGAGACCCTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SPGLHAMHPPDCPSSDAIPPGPT*ARDPRS Trigger: GGATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGG...GATAGCATCTGAGGACGGGCAGTCAGGTGGATGCATGGCATGAAGACCTGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGCCAATTCAGCTGCAGACAGGAGGAGAAGCCGTCACCAGGTCTTCATCCTCCGGGTCCAACTTaGGCGCGAGACCCTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: FLGQFSCRQEEKPSPGLHPPGPT*ARDPRS Trigger: GGATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGG...ATGAAGACCTGGTGACGGCTTCTCCTCCTGTCTGCAGCTGAATTGGCCCAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR TCA 90 bp | TTTCTGGGCCAATTCAGCTGCAGACAGGAGGAGAAGCCGTCACCAGGTCTTCATTGGAGCTCTGCCTTCTaGGTGCTGGGATTAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: FLGQFSCRQEEKPSPGLHWSSAF*VLGLKV Trigger: CACTTTTAATCCCAGCACTCAGAAGGCAGAGCTCCA...ATGAAGACCTGGTGACGGCTTCTCCTCCTGTCTGCAGCTGAATTGGCCCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107808.3 |
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| CDS-3UTR CCA 90 bp | AAGACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGCCTCCGGGTCCAACTTaGGCGCGAGACCCTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: KTSFCTSQVALYFSYGGQPPGPT*ARDPRS Trigger: GGATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGG...CTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR GCA 90 bp | TTTCTGGGCCAATTCAGCTGCAGACAGGAGGAGAAGCCGTCACCAGGTCTTCATAGATATATGGAGCTCTaGCTTCTGAGTGCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: FLGQFSCRQEEKPSPGLHRYMEL*LLSAGI Trigger: AATCCCAGCACTCAGAAGGCAGAGCTCCATATATCT...ATGAAGACCTGGTGACGGCTTCTCCTCCTGTCTGCAGCTGAATTGGCCCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107808.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGTATGCTGACTTCCAAACAGACTTCACAAATAACACTTTGAACAGAAGTCCTCCGGGTCCAACTTaGGCGCGAGACCCTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: WVYADFQTDFTNNTLNRSPPGPT*ARDPRS Trigger: GGATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGG...ACTTCTGTTCAAAGTGTTATTTGTGAAGTCTGTTTGGAAGTCAGCATACACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| 3UTR CAA 72 bp | TATTTCAGCTATGGAGGTCAGTTCTCAAAGTCCTACTaGTTCTCAACAAGTAGTTTATATGTCCGTTTAATC | + |
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Preference number: 4 (lower is better) Translates to: YFSYGGQFSKSY*FSTSSLYVRLI Trigger: GATTAAACGGACATATAAACTACTTGTTGAGAACAAGTAGGACTTTGAGAACTGACCTCCATAGCTGAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR CAA 90 bp | GTCTTCATGCCATGCATCCACCTGACTGCCCGTCCTCAGATGCTATCCAGCTTCTCCTCCGGGTCCAACTaGGGCGCGAGACCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: VFMPCIHLTARPQMLSSFSSGSN*GARPSI Trigger: GATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGGA...GAAGCTGGATAGCATCTGAGGACGGGCAGTCAGGTGGATGCATGGCATGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 |
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| CDS-3UTR CAA 90 bp | GCCAATTCAGCTGCAGACAGGAGGAGAAGCCGTCACCAGGTCTTCATGCCATGCGAATTAATGGCCAGCTaGACTCCAGTTCCAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: ANSAADRRRSRHQVFMPCELMAS*TPVPGI Trigger: AATCCCTGGAACTGGAGTCAAGCTGGCCATTAATTC...GCATGGCATGAAGACCTGGTGACGGCTTCTCCTCCTGTCTGCAGCTGAATTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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| CDS CCA 90 bp | AATGGCCAGCTTGACTCCAGTTCCAGGGATTCCAACGCCCCCTTCTaGACTGCAGGCACGTGGTTCACATATAGACAAGCAGAAAAACAC | + |
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Preference number: 5 (lower is better) Translates to: NGQLDSSSRDSNAPF*TAGTWFTYRQAEKH Trigger: GTGTTTTTCTGCTTGTCTATATGTGAACCACGTGCCTGCAGTCCAGAAGGGGGCGTTGGAATCCCTGGAACTGGAGTCAAGCTGGCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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| CDS-3UTR CAA 90 bp | TCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTCATCCTCCGGGTCCAACTaGGGCGCGAGACCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: SFCTSQVALYFSYGGQFSSSGSN*GARPSI Trigger: GATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGGA...TGAGAACTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR CAA 90 bp | ACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTCCTCCGGGTCCAACTaGGGCGCGAGACCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: TSFCTSQVALYFSYGGQFSSGSN*GARPSI Trigger: GATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGGA...GAACTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR CAA 90 bp | ACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGGAGGTCAGTTCTGCAGACCAGGCTGGTaGACTCGCAGCAGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: TSFCTSQVALYFSYGGQFCRPGW*TRSRAT Trigger: CGTGGCCCTGCTGCGAGTCAACCAGCCTGGTCTGCA...GAACTGACCTCCATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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| CDS-3UTR CAA 90 bp | ATGAACACAAGACATCTTTTTGCACTTCCCAAGTGGCTTTATATTTCAGCTATGTCCTCCGGGTCCAACTaGGGCGCGAGACCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: MNTRHLFALPKWLYISAMSSGSN*GARPSI Trigger: GATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGGA...CATAGCTGAAATATAAAGCCACTTGGGAAGTGCAAAAAGATGTCTTGTGTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107807.2 ENSMUST00000107808.3 ENSMUST00000107809.9 ENSMUST00000107810.3 |
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| CDS-3UTR CAA 90 bp | TATGCTGACTTCCAAACAGACTTCACAAATAACACTTTGAACAGAAGTGGTAAAGCTACCATGCCCGGTTaGACTCGCAGCAGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: YADFQTDFTNNTLNRSGKATMPG*TRSRAT Trigger: CGTGGCCCTGCTGCGAGTCAAACCGGGCATGGTAGC...TTTACCACTTCTGTTCAAAGTGTTATTTGTGAAGTCTGTTTGGAAGTCAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107808.3 |
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| CDS CAA 72 bp | CTCTGTGTAACCGCCCTGTCTGTCCTGGAACTCCATTaGCAGACCAGGCTGGTTGACTCGCAGCAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCVTALSVLELH*QTRLVDSQQGH Trigger: GTGGCCCTGCTGCGAGTCAACCAGCCTGGTCTGCAAATGGAGTTCCAGGACAGACAGGGCGGTTACACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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| CDS GCA 72 bp | GAGCTCTGCCTTCTGAGTGCTGGGATTAAAAGTGTGTaGTACCATGCCCGGTTTGACTCGCAGCAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ELCLLSAGIKSV*YHARFDSQQGH Trigger: GTGGCCCTGCTGCGAGTCAAACCGGGCATGGTAGCACACACTTTTAATCCCAGCACTCAGAAGGCAGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107808.3 |
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| CDS CCA 72 bp | CTTGACTCCAGTTCCAGGGATTCCAACGCCCCCTTCTaGACTGCAGGCACGTGGTTCACATATAGACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LDSSSRDSNAPF*TAGTWFTYRQA Trigger: TGCTTGTCTATATGTGAACCACGTGCCTGCAGTCCAGAAGGGGGCGTTGGAATCCCTGGAACTGGAGTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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| CDS CCA 72 bp | AGGGATTCCAACGCCCCCTTCTGGACTGCAGGCACGTaGTTCACATATAGACAAGCAGAAAAACACATAACA | + |
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Preference number: 6 (lower is better) Translates to: RDSNAPFWTAGT*FTYRQAEKHIT Trigger: TGTTATGTGTTTTTCTGCTTGTCTATATGTGAACCACGTGCCTGCAGTCCAGAAGGGGGCGTTGGAATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107809.9 |
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