Pregenerated sensors for TOMM40L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005674Ensembl transcript IDs: ENSMUST00000005817.9, ENSMUST00000111326.8, ENSMUST00000111327.8, ENSMUST00000138184.8, ENSMUST00000143405.2, ENSMUST00000147246.2
Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTaGATCAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: EPDRHSGGQRKHLCN*ISSRKNWSRSSWGP Trigger: GGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTGATTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGTCTGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | CAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTTTCGCCAGTaGTTGAGGAAGGCTCCAAGGGCTAGGGTGACAGGCAGGGGACGC | + |
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Preference number: 1 (lower is better) Translates to: QPTVMLKPQWNLFRQ*LRKAPRARVTGRGR Trigger: GCGTCCCCTGCCTGTCACCCTAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATTCCATTGCGGCTTCAGCATCACTGTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR CCA 90 bp | CCACTCTGCCCATGGGACCTAGGAGTCATCCGGCAAGGTAGGCTCTaGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: PLCPWDLGVIRQGRL*RGTKLVSGPRVSDS Trigger: TGAGTCTGATACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGACTCCTAGGTCCCATGGGCAGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR TCA 90 bp | CGCTGCTGGTCTCAACAGCTTTGTCATCTCTCTTGCCTGACACAGTaGTACTGTCAGCAGAAGCCCTGGCATTGCGGCGAGCCAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: RCWSQQLCHLSCLTQ*YCQQKPWHCGEPDR Trigger: CCTGTCTGGCTCGCCGCAATGCCAGGGCTTCTGCTGACAGTATCACTGTGTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | ATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGATGGCTGAAAGGTaGTCGCTGCTGGTCTCAACAGCTTTGTCATCTCTCTTGCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: IWGGGVAPTEGMAER*SLLVSTALSSLLPD Trigger: GTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGTTGGGGCCACTCCACCTCCCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR CCA 90 bp | CCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGATaGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTTGTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: PPSLSGEVEWPQLKG*LKGARCWSQQLCHL Trigger: GAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | TGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATaGAATGCTGAACAGTCACTGTCTCTTAGTGCACTCATCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: WTPHGNQQEGAWEWQ*NAEQSLSLSALISG Trigger: CCCACTGATGAGTGCACTAAGAGACAGTGACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR GCA 90 bp | TCATGCATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGTTGCCTCTaGTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: SCITGLSSLGAPCCL*SHTLQISTRLWCNR Trigger: TCTGTTGCACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | ATCTGTTCATGCATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGTTaGCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGC | + |
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Preference number: 1 (lower is better) Translates to: ICSCITGLSSLGAPC*LCSHTLQISTRLWC Trigger: GCACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCATGAACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | GATGTGACCTGGGTACCTGAGGAGGTAACCCACAGAAGAAGGCTATaGCCTGATGGAGAACAGATCTCCAGAATCCCACGATGGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: DVTWVPEEVTHRRRL*PDGEQISRIPRWAG Trigger: ACCTGCCCATCGTGGGATTCTGGAGATCTGTTCTCCATCAGGGCATAGCCTTCTTCTGTGGGTTACCTCCTCAGGTACCCAGGTCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | GGATTCGGAGGCTGCGCCGGGGGTAGGAAGGGATCTGTGAAACACTaGGCTCCGGATGGATGCATTTTACTGTTGTTTCCTTTGGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: GFGGCAGGRKGSVKH*APDGCILLLFPLGN Trigger: GTTTCCCAAAGGAAACAACAGTAAAATGCATCCATCCGGAGCTCAGTGTTTCACAGATCCCTTCCTACCCCCGGCGCAGCCTCCGAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | GTGCAACAGATCATCAAGTTCACCAAGGATCTGCCGCTCTTCCGGTaGGTAGCACATGGCCTTTCAGGAAGCAAGTGCTCGCTCGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: VQQIIKFTKDLPLFR*VAHGLSGSKCSLGK Trigger: CTTACCGAGCGAGCACTTGCTTCCTGAAAGGCCATGTGCTACTCACCGGAAGAGCGGCAGATCCTTGGTGAACTTGATGATCTGTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | CTCGCCATGTGGGCCCCATGTTTGACCAGTTTGTGCAGTTCAAGGTaGGAACTTAACCAGGATGTGACCTGGGTACCTGAGGAGGTAACC | + |
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Preference number: 1 (lower is better) Translates to: LAMWAPCLTSLCSSR*ELNQDVTWVPEEVT Trigger: GGTTACCTCCTCAGGTACCCAGGTCACATCCTGGTTAAGTTCTCACCTTGAACTGCACAAACTGGTCAAACATGGGGCCCACATGGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | TCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTaGAAGGACTGCATCTCCAGGAGCCTGAGTATGTGCTCATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSTSFWSRSSTSIKT*KDCISRSLSMCSWL Trigger: CAGCCATGAGCACATACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTGGAGGATCGACTCCAAAAACTCGTACTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | CCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCTCTaGTCATTCCCTAATGAATCCGTTTGCTACGAGGGAGATGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PSSTVQAQTSMPPSL*SFPNESVCYEGDAL Trigger: TAAAGCATCTCCCTCGTAGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| 3UTR GCA 90 bp | ACTACGTTCTGTCTTCAAACAGAGAATTTCTTCTGTGGGCCTCTTTaGTACAAGATGGAGGACGCAGTCCATGGTGAGATGGTAGAACGG | + |
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Preference number: 1 (lower is better) Translates to: TTFCLQTENFFCGPL*YKMEDAVHGEMVER Trigger: CCGTTCTACCATCTCACCATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGTTTGAAGACAGAACGTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | TGTTGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTaGAACAGATCATCAAGTTCACCAAGGATCTGCCGCTCTTCCGGT | + |
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Preference number: 1 (lower is better) Translates to: CCLCSHTLQISTRLW*NRSSSSPRICRSSG Trigger: ACCGGAAGAGCGGCAGATCCTTGGTGAACTTGATGATCTGTTGCACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR CCA 90 bp | TCCTGTTGTTGTTTTCAGTCAGTAGAGATGCAAAGTCGTAGCTCATaGCCTGGGTGTGACAGCTTTCCTGAGACTGGTGACATTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SCCCFQSVEMQSRSS*PGCDSFPETGDIPY Trigger: GTAAGGAATGTCACCAGTCTCAGGAAAGCTGTCACACCCAGGCCATGAGCTACGACTTTGCATCTCTACTGACTGAAAACAACAACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| 3UTR TCA 90 bp | GAAAGTGTGCAGGGATTCCCCTGCCATCAGGAAACATTAATTCAATaGAGTCCCAAGGAAGCCTCAGAAACTCTTTCTTCCTTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: ESVQGFPCHQETLIQ*SPKEASETLSSFLL Trigger: AAGGAGGAAGGAAGAAAGAGTTTCTGAGGCTTCCTTGGGACTTCATTGAATTAATGTTTCCTGATGGCAGGGGAATCCCTGCACACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | TATTCTCCACCCTCCCCTTCTTTCCCATGGTGCATTGCTTTCTGCTaGAGTGTATCACAGATGAATATGAGATCGACAGAAAGTGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: YSPPSPSFPWCIAFC*SVSQMNMRSTESVQ Trigger: CTGCACACTTTCTGTCGATCTCATATTCATCTGTGATACACTTCAGCAGAAAGCAATGCACCATGGGAAAGAAGGGGAGGGTGGAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR GCA 90 bp | CTTCCCACTTTATTCTCCACCCTCCCCTTCTTTCCCATGGTGCATTaGTTTCTGCTGAAGTGTATCACAGATGAATATGAGATCGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LPTLFSTLPFFPMVH*FLLKCITDEYEIDR Trigger: TCTGTCGATCTCATATTCATCTGTGATACACTTCAGCAGAAAGCAATGCACCATGGGAAAGAAGGGGAGGGTGGAGAATAAAGTGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR TCA 90 bp | TCTAGAACTGGATCTAGAAGGCCTCACCTTCAGATTCTATACAGTTaGCGTTTTGGCCAAGAACTTCTTTTACACTTGACCTCAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: SRTGSRRPHLQILYS*RFGQELLLHLTSKP Trigger: GGGCTTTGAGGTCAAGTGTAAAAGAAGTTCTTGGCCAAAACGTCAACTGTATAGAATCTGAAGGTGAGGCCTTCTAGATCCAGTTCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGCTGCTGCAGAGGCTaGTCCCAGGACAACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: WKGYSAGPHTGTSRKELGSCCRG*SQDNLS Trigger: GCTGAGGTTGTCCTGGGAGCAGCCTCTGCAGCAGCT...CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGACAGGACTCCCAGCTGCCTTACTCCAAGGGCTAGGGTaGCAGGCAGGGGACGCATCT | + |
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Preference number: 2 (lower is better) Translates to: LRSGPGDRNLRTGLPAALLQGLG*QAGDAS Trigger: AGATGCGTCCCCTGCCTGTCACCCTAGCCCTTGGAG...TAAGGCAGCTGGGAGTCCTGTCCTGAGGTTCCTATCCCCTGGACCACTCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGAAAGGTTCCAGCTGCTaGAGAGGCTGCTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: AAARGDLQLRPRLASFPQKGSSC*RGCSQD Trigger: GTCCTGGGAGCAGCCTCTGCAGCAGCTGGAACCTTT...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGTTCTGTATGCAAAGCTaGTGGGCCTGCTGGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: WKGYSAGPHTGTSRKELGFCMQS*WACWLT Trigger: GGTCAGCCAGCAGGCCCATCAGCTTTGCATACAGAA...CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGCTCCAGAGCATCTGCTaGTCAGACTTAGCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RPPGIHWPGKGTALDPTRLQSIC*SDLASL Trigger: CAGAGAGGCTAAGTCTGAGCAGCAGATGCTCTGGAG...CCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGCCCCCACTCTGCCCATaGGACCTAGGAGTCATCCGG | + |
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Preference number: 2 (lower is better) Translates to: KGGGQPQGQSCSPETQGMPPLCP*DLGVIR Trigger: CCGGATGACTCCTAGGTCCCATGGGCAGAGTGGGGG...CATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGCTCGGGGCTAGGAGGTaGCTAGAGTTCCTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRLGARR*LEFLLG Trigger: TCCCAGAAGGAACTCTAGTCACCTCCTAGCCCCGAG...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAGCACAAGCCGATGGGTaGTGCTCTGCAGGAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GGGQPQGQSCSPETQGMGAQADG*CSAGSE Trigger: CTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGC...TCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGTGTTTCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: WKGYSAGPHTGTSRKELGCFASD*GRLQGL Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACA...CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGAAAGGTTCCAGCTGCTaGAGAGGCTGCTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRKGSSC*RGCSQD Trigger: GTCCTGGGAGCAGCCTCTGCAGCAGCTGGAACCTTT...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGTCCCGAGGGAAGGAGTaGAAGACTGAGGAATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LERVQRWTPHGNQQEGAWSRGKE*KTEEWR Trigger: TCTCCATTCCTCAGTCTTCCACTCCTTCCCTCGGGA...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGCTCGGGGCTAGGAGGTaGCTAGAGTTCCTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGQPQGQSCSPETQGMGKLGARR*LEFLLG Trigger: TCCCAGAAGGAACTCTAGTCACCTCCTAGCCCCGAG...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTGGTATGAGGTGTGGAGCAATGGCCAGGAGGCTCCTCAGTCTACCATCTGTTGAGGCCCAGGCTTaGATCCTTTCCCCAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGMRCGAMARRLLSLPSVEAQA*ILSPDP Trigger: GGGGTCTGGGGAAAGGATGCAAGCCTGGGCCTCAAC...AGATGGTAGACTGAGGAGCCTCCTGGCCATTGCTCCACACCTCATACCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTTGTCATCTCTCTTGCCCCCACTCTGCCCATaGGACCTAGGAGTCATCCGG | + |
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Preference number: 2 (lower is better) Translates to: GMAERCSLLVSTALSSLLPPLCP*DLGVIR Trigger: CCGGATGACTCCTAGGTCCCATGGGCAGAGTGGGGG...CAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTTGTCATCTCTCTTGTGGTCCAGATCCTCCTaGGGGCCCACACTCGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GMAERCSLLVSTALSSLLWSRSS*GPTLAM Trigger: CATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCA...CAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR CAA 90 bp | TTGCGGCGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTaGCAACTGAATCAGCAGCAGAAAGAACTGGTCCAGATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRRARQAQRRAEKAS*QLNQQQKELVQILL Trigger: CAGGAGGATCTGGACCAGTTCTTTCTGCTGCTGATTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGTCTGGCTCGCCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGTTCTGTATGCAAAGCTaGTGGGCCTGCTGGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: CCSDLASLRSGPGDRNLRFCMQS*WACWLT Trigger: GGTCAGCCAGCAGGCCCATCAGCTTTGCATACAGAA...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGAGCATCTCCAGGAGCCTaGGTATGTGCTCATGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGASPGA*VCAHGC Trigger: GCAGCCATGAGCACATACTCAGGCTCCTGGAGATGC...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR-3UTR CCA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGGTGGGCCCATTCTTTaGTCTTTCTGTGGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRGGPIL*SFCGQR Trigger: TCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGAGGGATACACTGGCCTaGAAAGGGTACAGCGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KGGGQPQGQSCSPETQGMRDTLA*KGYSAG Trigger: TCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCT...CATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGTTCCCAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: CCSDLASLRSGPGDRNLRFPGSE*LCSHLP Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTGGGAA...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGATGTGACCTGGGTACCTaGGGAGGTAACCCACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGCDLGT*GGNPQK Trigger: CTTCTGTGGGTTACCTCCTCAGGTACCCAGGTCACA...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAGGACAACCTCAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTTTTGCATGGGCCCCACCTaGCCCAACATTCAACGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPGQPQPTVMLKPQWNLFCMGPT*PNIQRS Trigger: GCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCA...AAACAGATTCCATTGCGGCTTCAGCATCACTGTGGGCTGAGGTTGTCCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGGACAGGACTCCCAGCTaGCTTATTTCCCTGGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: CCSDLASLRSGPGDRNLRDRTPS*LISLVT Trigger: GGTTACCAGGGAAATAAGGCAGCTGGGAGTCCTGTC...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGCCAGATTGCTCAGACTaGTGTGTTGTCTCCCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QQQKELVQILLGAHTRHVPDCSD*CVVSLF Trigger: GAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGG...CACATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAACTCCCCCACTCTGCCCATaGGACCTAGGAGTCATCCGG | + |
|
Preference number: 2 (lower is better) Translates to: EIIVGLMAVLGTSTRYLTPPLCP*DLGVIR Trigger: CCGGATGACTCCTAGGTCCCATGGGCAGAGTGGGGG...AGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGACCTTCTGGGAATGGGTaGGCCCATTCTTTGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGGQPQGQSCSPETQGMGPSGNG*AHSLVF Trigger: AAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGG...TCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGACAGGACTCCCAGCTGCCTTAAGTTCCTTCTGGGAATaGGTGGGCCCATTCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LRSGPGDRNLRTGLPAALSSFWE*VGPFFG Trigger: ACCAAAGAATGGGCCCACCCATTCCCAGAAGGAACT...TAAGGCAGCTGGGAGTCCTGTCCTGAGGTTCCTATCCCCTGGACCACTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAACTCTCATCAGTGGGGCGTaGAGTGGGTGGGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EIIVGLMAVLGTSTRYLTLISGA*SGWGTE Trigger: CTCTGTCCCCCACCCACTCCACGCCCCACTGATGAG...AGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGAAGGAGTGGAAGACTaGGGAATGGAGAAACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGGGQPQGQSCSPETQGMEGVED*GMEKPG Trigger: TCCTGGTTTCTCCATTCCTCAGTCTTCCACTCCTTC...CATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR TCA 90 bp | CTACCATCTCTCACAGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACCTCGGGGCTAGGAGGTaGCTAGAGTTCCTTCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPSLTAGFQYEFLESILHLGARR*LEFLLG Trigger: TCCCAGAAGGAACTCTAGTCACCTCCTAGCCCCGAG...GTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCTGCTGTGAGAGATGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAGATGCAAAGTCGTAGCTCATGGCCTGGGTGTGACAGCTTTCCTGAGACTAAAGGTTCCAGCTGCTaGAGAGGCTGCTCCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VEMQSRSSWPGCDSFPETKGSSC*RGCSQD Trigger: GTCCTGGGAGCAGCCTCTGCAGCAGCTGGAACCTTT...AGTCTCAGGAAAGCTGTCACACCCAGGCCATGAGCTACGACTTTGCATCTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCGGTGGGCCCATTCTTTaGTCTTTCTGTGGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRGGPIL*SFCGQR Trigger: TCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAGACCTAAGTCTAAAGTGCCCTTGTTTTCTACCCGACACAGGTCCCTAACCCTCATCAGTGGGGCGTaGAGTGGGTGGGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DRPKSKVPLFSTRHRSLTLISGA*SGWGTE Trigger: CTCTGTCCCCCACCCACTCCACGCCCCACTGATGAG...GGTTAGGGACCTGTGTCGGGTAGAAAACAAGGGCACTTTAGACTTAGGTCTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCCTGAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTCATCAGTGGGGCGTaGAGTGGGTGGGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AFLRLVTFLTSHLSDFSKLISGA*SGWGTE Trigger: CTCTGTCCCCCACCCACTCCACGCCCCACTGATGAG...TTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGCCTGAACCTGTTCATTaGCCTTGTGGTAATAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: WKGYSAGPHTGTSRKELGPEPVH*PCGNNL Trigger: CAAGTTATTACCACAAGGCCAATGAACAGGTTCAGG...CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR CAA 90 bp | AGACCTTCCCTCGGACCACCCCATCCATCGCACACAGTATCCAGATaGCTCAGACTGCTGTGTTGTCTCCCTTTTCCAAGTTGTTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RPSLGPPHPSHTVSR*LRLLCCLPFPSCWL Trigger: GAGCCAACAACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGCGATGGATGGGGTGGTCCGAGGGAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR CAA 90 bp | TATCTGTTCATGCATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGTaGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLFMHHRPFQPRGPV*PLLTHFADINTFMV Trigger: CACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCATGAACAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGCCATGCAGATTTCTCTaGTTTGAAGAAGGAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: AAARGDLQLRPRLASFPQPCRFL*FEEGVV Trigger: TACTACTCCTTCTTCAAAGCAGAGAAATCTGCATGG...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGCCAAAGGTTTCTGTATaGAAAGCTGATGGGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KGGGQPQGQSCSPETQGMPKVSV*KADGPA Trigger: AGCAGGCCCATCAGCTTTGCATACAGAAACCTTTGG...CATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGAAGTTCCTTCTGGGAATaGGTGGGCCCATTCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGSSFWE*VGPFFG Trigger: ACCAAAGAATGGGCCCACCCATTCCCAGAAGGAACT...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAACTCAGAGAGAAGGGAGGTaGGCAACCACAGGGCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EIIVGLMAVLGTSTRYLTQREGR*ATTGPK Trigger: CTTTGGCCCTGTGGTTGCCCACCTCCCTTCTCTCTG...AGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGCAGCCAGAGTCAAGATaGCCCCCTCTTCTCCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SFCGQRFNSLILPSRGKEQPESR*PPLLLA Trigger: GGCCAGGAGAAGAGGGGGCCATCTTGACTCTGGCTG...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR CAA 90 bp | ACTGAAGGGATGGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTaGTCATCTCTCTTGCCTGACACAGTGATACTGTCAGCAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TEGMAERCSLLVSTA*SSLLPDTVILSAEA Trigger: GGCTTCTGCTGACAGTATCACTGTGTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGCAGATTTCTCTGCTTTaGAGAAGGAGTAGTAATATC | + |
|
Preference number: 2 (lower is better) Translates to: AAARGDLQLRPRLASFPQQISLL*RRSSNI Trigger: GATATTACTACTCCTTCTTCAAAGCAGAGAAATCTG...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGAAAGGTTCCAGCTGCTaGAGAGGCTGCTCCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SFCGQRFNSLILPSRGKEKGSSC*RGCSQD Trigger: GTCCTGGGAGCAGCCTCTGCAGCAGCTGGAACCTTT...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGACATCTATGCCACCTTCGCTCTGCTCATTCCCTAATGAATCCGTTTGCTCTCAAAGGTTCCAGCTaGTGCAGAGGCTGCTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LRHLCHLRSAHSLMNPFALKGSS*CRGCSQ Trigger: CTGGGAGCAGCCTCTGCAGCAGCTGGAACCTTTGAG...AGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATGGCCTGGGTGTGACAGCTTTCCTGAGACTGGTGACATTCCTTACCTCTCAGACAGGACTCCCAGCTaGCTTATTTCCCTGGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: SWPGCDSFPETGDIPYLSDRTPS*LISLVT Trigger: GGTTACCAGGGAAATAAGGCAGCTGGGAGTCCTGTC...TGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGCTGTCACACCCAGGCCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCCCCCACTCTGCCCATaGGACCTAGGAGTCATCCGG | + |
|
Preference number: 2 (lower is better) Translates to: PILWSFCGQRFNSLILPSPPLCP*DLGVIR Trigger: CCGGATGACTCCTAGGTCCCATGGGCAGAGTGGGGG...GGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGCAGAGAGAAGGGAGGTaGGCAACCACAGGGCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFCGQRFNSLILPSRGKEQREGR*ATTGPK Trigger: CTTTGGCCCTGTGGTTGCCCACCTCCCTTCTCTCTG...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGGATAGAGGCCCTTCTTaGGTATGTCTGAGATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CCSDLASLRSGPGDRNLRDRGPS*VCLRFS Trigger: GGAAAATCTCAGACATACCCAAGAAGGGCCTCTATC...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGATGGAGGACGCAGTCCATCGGAAACACAGGGGATaGGAAAGATGGAAGCCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: TENFFCGPLCYKMEDAVHRKHRG*ERWKPR Trigger: CCGAGGCTTCCATCTTTCCCATCCCCTGTGTTTCCG...ATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGACAGGACTCCCAGCTGCCTTACAGATTTCTCTGCTTTaGAGAAGGAGTAGTAATATC | + |
|
Preference number: 2 (lower is better) Translates to: LRSGPGDRNLRTGLPAALQISLL*RRSSNI Trigger: GATATTACTACTCCTTCTTCAAAGCAGAGAAATCTG...TAAGGCAGCTGGGAGTCCTGTCCTGAGGTTCCTATCCCCTGGACCACTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR TCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCCTTCTTGGGTATGTCTaGGATTTTCCAAGATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRLLGYV*DFPRCS Trigger: GCTACATCTTGGAAAATCTCAGACATACCCAAGAAG...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAACTCCTTCTGGGAATGGGTaGGCCCATTCTTTGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EIIVGLMAVLGTSTRYLTPSGNG*AHSLVF Trigger: AAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGG...AGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTCTGAGATTTTCCAAGATGTAGCTCCAGAGCATCTGCTGCTCAGACTTCGGAAACACAGGGGATaGGAAAGATGGAAGCCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: GMSEIFQDVAPEHLLLRLRKHRG*ERWKPR Trigger: CCGAGGCTTCCATCTTTCCCATCCCCTGTGTTTCCG...AAGTCTGAGCAGCAGATGCTCTGGAGCTACATCTTGGAAAATCTCAGACATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTCTGAGATTTTCCAAGATGTAGCTCCAGAGCATCTGCTGCTCAGACTTAGGGATACACTGGCCTaGAAAGGGTACAGCGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GMSEIFQDVAPEHLLLRLRDTLA*KGYSAG Trigger: TCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCT...AAGTCTGAGCAGCAGATGCTCTGGAGCTACATCTTGGAAAATCTCAGACATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCAGGGATACACTGGCCTaGAAAGGGTACAGCGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVRDTLA*KGYSAG Trigger: TCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCT...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGCAGATTTCTCTGCTTTaGAGAAGGAGTAGTAATATC | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQGQSCSPETQGMGKQISLL*RRSSNI Trigger: GATATTACTACTCCTTCTTCAAAGCAGAGAAATCTG...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAGACACATCCCGTAGTCCCTCTCCTTTACTCCAGAGCCATACAGCTTATGGAAGTGAGCAACCATaGTCACTGATTCCCCAATCA | + |
|
Preference number: 2 (lower is better) Translates to: KPDTSRSPSPLLQSHTAYGSEQP*SLIPQS Trigger: TGATTGGGGAATCAGTGATCATGGTTGCTCACTTCC...ATAAGCTGTATGGCTCTGGAGTAAAGGAGAGGGACTACGGGATGTGTCTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTCAAGGGAGCGGCTGTGGAAATATTGCATATCTCACTCAACACTACGTTCCTCCAGAGCATCTGCTaGTCAGACTTAGCCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLKGAAVEILHISLNTTFLQSIC*SDLASL Trigger: CAGAGAGGCTAAGTCTGAGCAGCAGATGCTCTGGAG...GAACGTAGTGTTGAGTGAGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTCTGAGATTTTCCAAGATGTAGCTCCAGAGCATCTGCTGCTCAGACTTGGTGGGCCCATTCTTTaGTCTTTCTGTGGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GMSEIFQDVAPEHLLLRLGGPIL*SFCGQR Trigger: TCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC...AAGTCTGAGCAGCAGATGCTCTGGAGCTACATCTTGGAAAATCTCAGACATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAACAGTGTTGAGTTCCTTCTGGGAATaGGTGGGCCCATTCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: DLKALGSGKTRHNEGTVLSSFWE*VGPFFG Trigger: ACCAAAGAATGGGCCCACCCATTCCCAGAAGGAACT...CAACACTGTTCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR TCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCCAGATTTCTCTGCTTTaGAGAAGGAGTAGTAATATC | + |
|
Preference number: 2 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRQISLL*RRSSNI Trigger: GATATTACTACTCCTTCTTCAAAGCAGAGAAATCTG...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR TCA 90 bp | GACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAACAGTGTTGATGCTCTGCAGGAAGTaGGCAACCATGATCACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: DLKALGSGKTRHNEGTVLMLCRK*ATMITD Trigger: ATCAGTGATCATGGTTGCTCACTTCCTGCAGAGCAT...CAACACTGTTCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCAGGACAACCTCAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTTTCCATGCAGATTTCTCTaGTTTGAAGAAGGAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LPGQPQPTVMLKPQWNLFPCRFL*FEEGVV Trigger: TACTACTCCTTCTTCAAAGCAGAGAAATCTGCATGG...AAACAGATTCCATTGCGGCTTCAGCATCACTGTGGGCTGAGGTTGTCCTGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTCCTGAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAAATGCCACCTTCGCTCTaGTCATTCCCTAATGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: AFLRLVTFLTSHLSDFSKMPPSL*SFPNES Trigger: GGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCAT...TTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCCCTTCTGGGAATGGGTaGGCCCATTCTTTGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVPSGNG*AHSLVF Trigger: AAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGG...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCTGGGAATGGGTaGGCCCATTCTTTGGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGPILWSFCGQRFNSLILPSGNG*AHSLVF Trigger: AAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGG...GAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACGTTCTGTCTTCAAACAGAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGACTGAGTATGTGCTCATaGCTGCCACGGCCCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LRSVFKQRISSVGLFATRLSMCS*LPRPSS Trigger: AGAAGAGGGCCGTGGCAGCCATGAGCACATACTCAG...TCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGTTTGAAGACAGAACGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTACAAGAGGAGATGGCGCTGATTCTGAACAACCACATTATGGAACAACAGCCAAAGGTTTCTGTATaGAAAGCTGATGGGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QLQEEMALILNNHIMEQQPKVSV*KADGPA Trigger: AGCAGGCCCATCAGCTTTGCATACAGAAACCTTTGG...CTGTTGTTCCATAATGTGGTTGTTCAGAATCAGCGCCATCTCCTCTTGTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCATGCCACCTTCGCTCTaGTCATTCCCTAATGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVMPPSL*SFPNES Trigger: GGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCAT...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCAGTTCCTTCTGGGAATaGGTGGGCCCATTCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KTRHNEGTVLIEALLGYVSSFWE*VGPFFG Trigger: ACCAAAGAATGGGCCCACCCATTCCCAGAAGGAACT...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCATACAGTTGACGTTTTaGCCAAGAACTTCTTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRIQLTF*PRTSFT Trigger: TGTAAAAGAAGTTCTTGGCCAAAACGTCAACTGTAT...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCCCAAAGGTTTCTGTATaGAAAGCTGATGGGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KTRHNEGTVLIEALLGYVPKVSV*KADGPA Trigger: AGCAGGCCCATCAGCTTTGCATACAGAAACCTTTGG...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACACAGTATCCAGATTGCTCAGACTGCTGTGTTGTCTCCCTTTTCCAAGTTGCCATGCAGATTTCTCTaGTTTGAAGAAGGAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: AHSIQIAQTAVLSPFSKLPCRFL*FEEGVV Trigger: TACTACTCCTTCTTCAAAGCAGAGAAATCTGCATGG...CAACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAACACTACGTTCTGTCTTCAAACAGAGAATTTCTTCTGTGGGCCTCTTTGCCTTCTTGGGTATGTCTaGGATTTTCCAAGATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LNTTFCLQTENFFCGPLCLLGYV*DFPRCS Trigger: GCTACATCTTGGAAAATCTCAGACATACCCAAGAAG...GCAAAGAGGCCCACAGAAGAAATTCTCTGTTTGAAGACAGAACGTAGTGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCCTTCTTGGGTATGTCTaGGATTTTCCAAGATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: KTRHNEGTVLIEALLGYVLLGYV*DFPRCS Trigger: GCTACATCTTGGAAAATCTCAGACATACCCAAGAAG...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCCCATGCAGATTTCTCTaGTTTGAAGAAGGAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVPCRFL*FEEGVV Trigger: TACTACTCCTTCTTCAAAGCAGAGAAATCTGCATGG...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGGAGAACAGATCTCCAGAATCCCACGATGGGCAGGTTCCTCAGCAAAAAATACAGTTGACGTTTTaGCCAAGAACTTCTTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: LMENRSPESHDGQVPQQKIQLTF*PRTSFT Trigger: TGTAAAAGAAGTTCTTGGCCAAAACGTCAACTGTAT...TTTTTGCTGAGGAACCTGCCCATCGTGGGATTCTGGAGATCTGTTCTCCATCAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | CCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTaGACCCCACACGGGAACCAGCAGGAAGGAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQGYTGLERVQR*TPHGNQQEGAW Trigger: CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR GCA 72 bp | AGCTCTGAACTCTACAGCCTCCGGCCTATCTGTTCATaGATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSELYSLRPICS*ITGLSSLGAPC Trigger: ACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCATGAACAGATAGGCCGGAGGCTGTAGAGTTCAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | TGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTaGGCCCCATGTTTGACCAGTTTGTGCAGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: WSRSSWGPTLAM*APCLTSLCSSR Trigger: CCTTGAACTGCACAAACTGGTCAAACATGGGGCCCACATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGGGTGGGCCCATTCTTaGGTCTTTCTGTGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRGWAHS*VFLWPE Trigger: CTCTGGCCACAGAAAGACCAAAGAATGGGCCCACCC...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGGGGTGGGCCCATTCTTaGGTCTTTCTGTGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CCSDLASLRSGPGDRNLRGWAHS*VFLWPE Trigger: CTCTGGCCACAGAAAGACCAAAGAATGGGCCCACCC...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTAGGGTGGGCCCATTCTTaGGTCTTTCTGTGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRQGRLWRGTKLVSGPRVGWAHS*VFLWPE Trigger: CTCTGGCCACAGAAAGACCAAAGAATGGGCCCACCC...TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGACAGGACTCCCAGCTGCCTTACCTTGTGGTAATAACTaGCATGGGCCCCACCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LRSGPGDRNLRTGLPAALPCGNN*HGPHLT Trigger: GGTCAGGTGGGGCCCATGCAAGTTATTACCACAAGG...TAAGGCAGCTGGGAGTCCTGTCCTGAGGTTCCTATCCCCTGGACCACTCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR GCA 72 bp | TGCATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGTTaGCTCTGCTCACACACTTTGCAGATATCAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: CITGLSSLGAPC*LCSHTLQISTR Trigger: ACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | CCATGGGACCTAGGAGTCATCCGGCAAGGTAGGCTCTaGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PWDLGVIRQGRL*RGTKLVSGPRV Trigger: TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGACTCCTAGGTCCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR TCA 72 bp | CCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTTTaGCCAGTTTGTGCAGTTCAAGGTGAGAACTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: PGGPHSPCGPHV*PVCAVQGENLT Trigger: GGTTAAGTTCTCACCTTGAACTGCACAAACTGGTCAAACATGGGGCCCACATGGCGAGTGTGGGCCCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | ACCGGCCTTTCCAGCCTCGGGGCCCCGTGTTGCCTCTaGTCACACACTTTGCAGATATCAACACGTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: TGLSSLGAPCCL*SHTLQISTRLW Trigger: CCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | GGTGGAGTGGCCCCAACTGAAGGGATGGCTGAAAGGTaGTCGCTGCTGGTCTCAACAGCTTTGTCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGVAPTEGMAER*SLLVSTALSSL Trigger: GAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGTTGGGGCCACTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTaGCCCCAACTGAAGGGATGGCTGAAAGGTGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: FFLPPSLSGEVE*PQLKGWLKGAR Trigger: GCGAGCACCTTTCAGCCATCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGGGAACTTCTTTTACACTaGACCTCAAAGCCCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: AAERTGPDPPGGPHSPCGELLLH*TSKPWV Trigger: AACCCAGGGCTTTGAGGTCAAGTGTAAAAGAAGTTC...CCCACATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | GATTCGGAGGCTGCGCCGGGGGTAGGAAGGGATCTGTaGAACACTGAGCTCCGGATGGATGCATTTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: DSEAAPGVGRDL*NTELRMDAFYC Trigger: ACAGTAAAATGCATCCATCCGGAGCTCAGTGTTTCACAGATCCCTTCCTACCCCCGGCGCAGCCTCCGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | GTGATGCTGAAGCCGCAATGGAATCTGTTTCGCCAGTaGTTGAGGAAGGCTCCAAGGGCTAGGGTGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VMLKPQWNLFRQ*LRKAPRARVTG Trigger: GCCTGTCACCCTAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATTCCATTGCGGCTTCAGCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR GCA 72 bp | TGGCCCCAACTGAAGGGATGGCTGAAAGGTGCTCGCTaGTGGTCTCAACAGCTTTGTCATCTCTCTTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WPQLKGWLKGAR*WSQQLCHLSCL Trigger: CAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGTTGGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | GGCTGCGCCGGGGGTAGGAAGGGATCTGTGAAACACTaGGCTCCGGATGGATGCATTTTACTGTTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCAGGRKGSVKH*APDGCILLLFP Trigger: AGGAAACAACAGTAAAATGCATCCATCCGGAGCTCAGTGTTTCACAGATCCCTTCCTACCCCCGGCGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | ATGGTAGAACGGTCCAGGGTATGTATCTCAGTGGTATaGGGTGTGGAGCAATGGCCAGGAGGCTCCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MVERSRVCISVV*GVEQWPGGSSV Trigger: GACTGAGGAGCCTCCTGGCCATTGCTCCACACCTCATACCACTGAGATACATACCCTGGACCGTTCTACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | AAGGGCAGCCAAGGCTGGGGCCTCTTACTAAAGCTCTaGACTCTACAGCCTCCGGCCTATCTGTTCATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KGSQGWGLLLKL*TLQPPAYLFMH Trigger: ATGCATGAACAGATAGGCCGGAGGCTGTAGAGTTCAGAGCTTTAGTAAGAGGCCCCAGCCTTGGCTGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | AGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTaGATCAGCAGCAGAAAGAACTGGTCCAGATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RHSGGQRKHLCN*ISSRKNWSRSS Trigger: GGAGGATCTGGACCAGTTCTTTCTGCTGCTGATTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | CCCCAACTGAAGGGATGGCTGAAAGGTGCTCGCTGCTaGTCTCAACAGCTTTGTCATCTCTCTTGCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PQLKGWLKGARC*SQQLCHLSCLT Trigger: TGTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCCTTCAGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAACAGTGTTGCGGGGAGATTTGCAGTaGAGGCCCAGGCTTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: DLKALGSGKTRHNEGTVLRGDLQ*RPRLAS Trigger: GGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCG...CAACACTGTTCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGAATGAAGGAACAGTGTaGATAGAGGCCCTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CCSDLASLRSGPGDRNLRNEGTV*IEALLG Trigger: CCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATT...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGGATGCATTTTACTGTaGTTTCCTTTGGGAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQQKELVQILLGAHTRHVGCILL*FPLGNQ Trigger: CTGGTTTCCCAAAGGAAACAACAGTAAAATGCATCC...CACATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGACTGGTCTCAACAGCTTaGTCATCTCTCTTGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGLVSTA*SSLLPD Trigger: GTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAG...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | CACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATaGAATGCTGAACAGTCACTGTCTCTTAGTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: HGNQQEGAWEWQ*NAEQSLSLSAL Trigger: GAGTGCACTAAGAGACAGTGACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR TCA 72 bp | ATCATCAAGTTCACCAAGGATCTGCCGCTCTTCCGGTaGGTAGCACATGGCCTTTCAGGAAGCAAGTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: IIKFTKDLPLFR*VAHGLSGSKCS Trigger: CGAGCACTTGCTTCCTGAAAGGCCATGTGCTACTCACCGGAAGAGCGGCAGATCCTTGGTGAACTTGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | CCTAGCACAAGCCGATGGGTGATGCTCTGCAGGAAGTaGGCAACCATGATCACTGATTCCCCAATCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PSTSRWVMLCRK*ATMITDSPIRS Trigger: GGATCTGATTGGGGAATCAGTGATCATGGTTGCTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR GCA 72 bp | GCCTCGGGGCCCCGTGTTGCCTCTGCTCACACACTTTaGAGATATCAACACGTTTATGGTGCAACAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASGPRVASAHTL*RYQHVYGATDH Trigger: ATGATCTGTTGCACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | TGGGTACCTGAGGAGGTAACCCACAGAAGAAGGCTATaGCCTGATGGAGAACAGATCTCCAGAATCCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: WVPEEVTHRRRL*PDGEQISRIPR Trigger: TCGTGGGATTCTGGAGATCTGTTCTCCATCAGGGCATAGCCTTCTTCTGTGGGTTACCTCCTCAGGTACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGGGGTGGGCCCATTCTTaGGTCTTTCTGTGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFCGQRFNSLILPSRGKEGWAHS*VFLWPE Trigger: CTCTGGCCACAGAAAGACCAAAGAATGGGCCCACCC...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGGAACTTCTTTTACACTaGACCTCAAAGCCCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CCSDLASLRSGPGDRNLRELLLH*TSKPWV Trigger: AACCCAGGGCTTTGAGGTCAAGTGTAAAAGAAGTTC...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR TCA 72 bp | GCCTCTTTGCTACAAGATGGAGGACGCAGTCCATGGTaGGATGGTAGAACGGTCCAGGGTATGTATCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASLLQDGGRSPW*DGRTVQGMYLS Trigger: ACTGAGATACATACCCTGGACCGTTCTACCATCTCACCATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | TGGGCCCCATGTTTGACCAGTTTGTGCAGTTCAAGGTaGGAACTTAACCAGGATGTGACCTGGGTACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WAPCLTSLCSSR*ELNQDVTWVPE Trigger: CTCAGGTACCCAGGTCACATCCTGGTTAAGTTCTCACCTTGAACTGCACAAACTGGTCAAACATGGGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | ACAGTGCAGGCTCAGACATCTATGCCACCTTCGCTCTaGTCATTCCCTAATGAATCCGTTTGCTACGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVQAQTSMPPSL*SFPNESVCYEG Trigger: TCCCTCGTAGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAGCCTGCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR GCA 72 bp | CAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATaGCACCTTCGCTCTGCTCATTCCCTAATGAATCCG | + |
|
Preference number: 3 (lower is better) Translates to: QSLVQQCRLRHL*HLRSAHSLMNP Trigger: CGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR GCA 72 bp | CCCATCCATCGCACACAGTATCCAGATTGCTCAGACTaGTGTGTTGTCTCCCTTTTCCAAGTTGTTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PIHRTQYPDCSD*CVVSLFQVVGS Trigger: GGAGCCAACAACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGCGATGGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR GCA 72 bp | TCGGACCACCCCATCCATCGCACACAGTATCCAGATTaGTCAGACTGCTGTGTTGTCTCCCTTTTCCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SDHPIHRTQYPD*SDCCVVSLFQV Trigger: AACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGCGATGGATGGGGTGGTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTACAAGAGGAGATGGCGCTGATTCTGAACAACCACATTATGGAACAACAGCCAGCAGGAAGGAGCTaGGGAGTGGCAATGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: QLQEEMALILNNHIMEQQPAGRS*GVAMKC Trigger: GCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGG...CTGTTGTTCCATAATGTGGTTGTTCAGAATCAGCGCCATCTCCTCTTGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGTCGTATCTTGTAGCCTaGTATTTGCCTCAAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GGQPQGQSCSPETQGMGKSYLVA*YLPQTL Trigger: TAGAGTTTGAGGCAAATACAAGGCTACAAGATACGA...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGACATCTATGCCACCTTCGCTCTGCTCATTCCCTAATGAATCCGTTTGCTAATGAAGGAACAGTGTaGATAGAGGCCCTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRHLCHLRSAHSLMNPFANEGTV*IEALLG Trigger: CCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATT...AGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAACCGCCTTCTAGAACTGGATCTAGAAGGCCTCACCTTCAGATTCTATACAATGAAGGAACAGTGTaGATAGAGGCCCTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TQPPSRTGSRRPHLQILYNEGTV*IEALLG Trigger: CCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATT...GTATAGAATCTGAAGGTGAGGCCTTCTAGATCCAGTTCTAGAAGGCGGTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCAATGAAGGAACAGTGTaGATAGAGGCCCTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVNEGTV*IEALLG Trigger: CCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATT...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGGAGAACAGATCTCCAGAATCCCACGATGGGCAGGTTCCTCAGCAAAAATTACTGTTGTTTCCTTaGGGAAACCAGGTACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LMENRSPESHDGQVPQQKLLLFP*GNQVLR Trigger: CCTAAGTACCTGGTTTCCCAAAGGAAACAACAGTAA...TTTTTGCTGAGGAACCTGCCCATCGTGGGATTCTGGAGATCTGTTCTCCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | GGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCTaGGATTTTCCAAGATGTAGCTCCAGAGCATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTVLIEALLGYV*DFPRCSSRASA Trigger: AGCAGATGCTCTGGAGCTACATCTTGGAAAATCTCAGACATACCCAAGAAGGGCCTCTATCAACACTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR TCA 72 bp | AGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTaGAAGGACTGCATCTCCAGGAGCCTGAGTATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SFWSRSSTSIKT*KDCISRSLSMC Trigger: GCACATACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTGGAGGATCGACTCCAAAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | TGTCTTCAAACAGAGAATTTCTTCTGTGGGCCTCTTTaGTACAAGATGGAGGACGCAGTCCATGGTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: CLQTENFFCGPL*YKMEDAVHGEM Trigger: CATCTCACCATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGTTTGAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | CAGGGATTCCCCTGCCATCAGGAAACATTAATTCAATaGAGTCCCAAGGAAGCCTCAGAAACTCTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QGFPCHQETLIQ*SPKEASETLSS Trigger: GGAAGAAAGAGTTTCTGAGGCTTCCTTGGGACTTCATTGAATTAATGTTTCCTGATGGCAGGGGAATCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | TGCTCACACACTTTGCAGATATCAACACGTTTATGGTaGAACAGATCATCAAGTTCACCAAGGATCTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: CSHTLQISTRLW*NRSSSSPRICR Trigger: GCGGCAGATCCTTGGTGAACTTGATGATCTGTTGCACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR CCA 72 bp | CTAGAGTTCCTTCTGGGAATGGGTGGGCCCATTCTTTaGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: LEFLLGMGGPIL*SFCGQRFNSLI Trigger: GATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGGAACTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR CCA 72 bp | GGCCAAGAACTTCTTTTACACTTGACCTCAAAGCCCTaGGTTCAGGAAAAACTAGGCACAATGAAGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GQELLLHLTSKP*VQEKLGTMKEQ Trigger: CTGTTCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTCAAGTGTAAAAGAAGTTCTTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCCTGAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACAAAATTTCAAAGTCTaGTTCATTCTTTTGGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: AFLRLVTFLTSHLSDFSKQNFKV*FILLAR Trigger: GCGGGCCAAAAGAATGAACAAGACTTTGAAATTTTG...TTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR GCA 72 bp | AGATCTCCCTTCTCAAGGGAGCGGCTGTGGAAATATTaGATATCTCACTCAACACTACGTTCTGTCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSPFSRERLWKY*ISHSTLRSVFK Trigger: TTTGAAGACAGAACGTAGTGTTGAGTGAGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAGGGAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR GCA 72 bp | TTATTCTCCACCCTCCCCTTCTTTCCCATGGTGCATTaGTTTCTGCTGAAGTGTATCACAGATGAATATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LFSTLPFFPMVH*FLLKCITDEYE Trigger: CTCATATTCATCTGTGATACACTTCAGCAGAAAGCAATGCACCATGGGAAAGAAGGGGAGGGTGGAGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| 3UTR TCA 72 bp | GGATCTAGAAGGCCTCACCTTCAGATTCTATACAGTTaGCGTTTTGGCCAAGAACTTCTTTTACACTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: GSRRPHLQILYS*RFGQELLLHLT Trigger: GGTCAAGTGTAAAAGAAGTTCTTGGCCAAAACGTCAACTGTATAGAATCTGAAGGTGAGGCCTTCTAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR GCA 72 bp | CCACCTTCGCTCTGCTCATTCCCTAATGAATCCGTTTaGTACGAGGGAGATGCTTTATACTATAGAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: PPSLCSFPNESV*YEGDALYYRIT Trigger: TGTTATTCTATAGTATAAAGCATCTCCCTCGTAGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR CCA 72 bp | AAGGCCTCACCTTCAGATTCTATACAGTTGACGTTTTaGCCAAGAACTTCTTTTACACTTGACCTCAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KASPSDSIQLTF*PRTSFTLDLKA Trigger: GGCTTTGAGGTCAAGTGTAAAAGAAGTTCTTGGCCAAAACGTCAACTGTATAGAATCTGAAGGTGAGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCCAAAATTTCAAAGTCTaGTTCATTCTTTTGGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: KTRHNEGTVLIEALLGYVQNFKV*FILLAR Trigger: GCGGGCCAAAAGAATGAACAAGACTTTGAAATTTTG...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | AGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGCAGCCAGAGTCAAGATaGCCCCCTCTTCTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPGIHWPGKGTALDPTRQPESR*PPLLLA Trigger: GGCCAGGAGAAGAGGGGGCCATCTTGACTCTGGCTG...CCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGGGTTCCTCTCGACGGTaGCTCCGGCGGGGTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AAARGDLQLRPRLASFPQGSSRR*LRRGKV Trigger: TACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACC...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| 3UTR CAA 72 bp | GTCTGCTATGACGCCGCTGCTCGGGGAGATTTGCAGTaGAGGCCCAGGCTTGCATCCTTTCCCCAGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCYDAAARGDLQ*RPRLASFPQTP Trigger: GGGGGTCTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGCGTCATAGCAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGCACAAGCCGATGGGTaGTGCTCTGCAGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LERVQRWTPHGNQQEGAWAQADG*CSAGSE Trigger: CTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGC...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGTGCATGGGCCCCACCTaGCCCAACATTCAACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LERVQRWTPHGNQQEGAWCMGPT*PNIQRS Trigger: GCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCA...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGACTCCAAGGGCTAGGGTaGCAGGCAGGGGACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGQPQGQSCSPETQGMGLQGLG*QAGDAS Trigger: AGATGCGTCCCCTGCCTGTCACCCTAGCCCTTGGAG...TCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGGGCCTGCTGTGTCTTTaGACAACCGGTGCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAARGDLQLRPRLASFPQGLLCL*TTGAAR Trigger: ACGAGCTGCACCGGTTGTGCAAAGACACAGCAGGCC...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGAGCTCGCAGCCGTTCTaGCAACAGAAGCAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERVQRWTPHGNQQEGAWESSQPF*QQKQDL Trigger: CAGGTCTTGCTTCTGTTGGCAGAACGGCTGCGAGCT...CTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGGTCAGGAACTTGGCCTaGTGTGTCTGGAAGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKGYSAGPHTGTSRKELGVRNLA*CVWKTA Trigger: GGCTGTCTTCCAGACACAGCAGGCCAAGTTCCTGAC...CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGCAGCCAGAGTCAAGATaGCCCCCTCTTCTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRQPESR*PPLLLA Trigger: GGCCAGGAGAAGAGGGGGCCATCTTGACTCTGGCTG...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR CAA 72 bp | GGAACTGTCTGCTATGACGCCGCTGCTCGGGGAGATTaGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVCYDAAARGD*QLRPRLASFPQ Trigger: CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGCGTCATAGCAGACAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGCTCATGTGCACAGTATaGGCCACCTGGAAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LERVQRWTPHGNQQEGAWLMCTV*ATWKWL Trigger: CAGCCATTTCCAGGTGGCTCATACTGTGCACATGAG...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGATCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGGQPQGQSCSPETQGMGSLHNR*SSSKLP Trigger: CGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGA...TCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGGGTTCCTCTCGACGGTaGCTCCGGCGGGGTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQGQSCSPETQGMGKGSSRR*LRRGKV Trigger: TACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACC...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR CCA 90 bp | ATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTATATCCCCCACCACAGTaGGGAACACCTCTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRQGRLWRGTKLVSGPRVYPPPQ*GTPLWG Trigger: GCCCCACAGAGGTGTTCCCCACTGTGGTGGGGGATA...TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGGCCATGTCAGGAACTTaGCCTGCTGTGTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAARGDLQLRPRLASFPQAMSGT*PAVSGR Trigger: TCTTCCAGACACAGCAGGCCAAGTTCCTGACATGGC...CTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | AGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGGAAGTGAGCAACCATaGTCACTGATTCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPGIHWPGKGTALDPTRGSEQP*SLIPQS Trigger: TGATTGGGGAATCAGTGATCATGGTTGCTCACTTCC...CCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGTCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQGQSCSPETQGMGKSLHNR*SSSKLP Trigger: CGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGA...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGTCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGGGQPQGQSCSPETQGMSLHNR*SSSKLP Trigger: CGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGA...CATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR CCA 90 bp | GTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGTTCCCAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRQGRLWRGTKLVSGPRFPGSE*LCSHLP Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTGGGAA...CCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| 3UTR CAA 72 bp | ATGCATCACCGGCCTTTCCAGCCTCGGGGCCCCGTGTaGCCTCTGCTCACACACTTTGCAGATATCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: MHHRPFQPRGPV*PLLTHFADINT Trigger: CGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAAAGGCCGGTGATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR GCA 90 bp | ATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTAGTCAGGAACTTGGCCTaGTGTGTCTGGAAGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRQGRLWRGTKLVSGPRVVRNLA*CVWKTA Trigger: GGCTGTCTTCCAGACACAGCAGGCCAAGTTCCTGAC...TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | AGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGCCTTCCATCTGTGCTaGGAATACATCTTTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RPPGIHWPGKGTALDPTRAFHLC*EYIFAQ Trigger: TTGTGCAAAGATGTATTCCCAGCACAGATGGAAGGC...CCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGCCTAGCACAAGCCGATaGGTGATGCTCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCSDLASLRSGPGDRNLRPSTSR*VMLCRK Trigger: CTTCCTGCAGAGCATCACCCATCGGCTTGTGCTAGG...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGCCTAGCACAAGCCGATaGGTGATGCTCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQGQSCSPETQGMGKPSTSR*VMLCRK Trigger: CTTCCTGCAGAGCATCACCCATCGGCTTGTGCTAGG...CTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCAGACTTAGCCTCTCTGAGGAGTGGTCCAGGGGATAGGAACCTCAGGTGTTTCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CCSDLASLRSGPGDRNLRCFASD*GRLQGL Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACA...CCTGAGGTTCCTATCCCCTGGACCACTCCTCAGAGAGGCTAAGTCTGAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGCACGCCTTCCATCTGTaGTGGGAATACATCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQQKELVQILLGAHTRHVHAFHL*WEYIFA Trigger: TGCAAAGATGTATTCCCAGCACAGATGGAAGGCGTG...CACATGGCGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| CDS-3UTR GCA 90 bp | GAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAGTCAGGAACTTGGCCTaGTGTGTCTTTGCACAACCG | + |
|
Preference number: 4 (lower is better) Translates to: EVGNHRAKVVLRKHRGWEVRNLA*CVFAQP Trigger: CGGTTGTGCAAAGACACAGCAGGCCAAGTTCCTGAC...TTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| CDS-3UTR CCA 90 bp | CTCAGACATCTATGCCACCTTCGCTCTGCTCATTCCCTAATGAATCCGTTTGCTCGAAGCTCCCGGGGTTaGGCAGCGGTTCCTCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRHLCHLRSAHSLMNPFARSSRG*AAVPLD Trigger: GTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCG...AGCAAACGGATTCATTAGGGAATGAGCAGAGCGAAGGTGGCATAGATGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCTTCCCAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRFPGSE*LCSHLP Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTGGGAA...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | ATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTATGCTCAGAACCTTGTTaGCAACCAGCTTCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRQGRLWRGTKLVSGPRVCSEPC*QPASRL Trigger: AAGGCGTGAAGCTGGTTGTCAACAAGGTTCTGAGCA...TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGACTCATGTGCACAGTATaGGCCACCTGGAAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGLMCTV*ATWKWL Trigger: CAGCCATTTCCAGGTGGCTCATACTGTGCACATGAG...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| CDS-3UTR TCA 90 bp | GGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAATGCTCTGCAGGAAGTaGGCAACCATGATCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGQPQGQSCSPETQGMGMLCRK*ATMITD Trigger: ATCAGTGATCATGGTTGCTCACTTCCTGCAGAGCAT...TCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGATGCAAAGTCGTAGCTCATGGCCTGGGTGTGACAGCTTTCCTGAGACTGCACAAGCCGATGGGTaGTGCTCTGCAGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEMQSRSSWPGCDSFPETAQADG*CSAGSE Trigger: CTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGC...AGTCTCAGGAAAGCTGTCACACCCAGGCCATGAGCTACGACTTTGCATCTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCCGAAGCTCCCGGGGTTaGGCAGCGGTTCCTCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVRSSRG*AAVPLD Trigger: GTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCG...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGTTCCAGCTGCTGCAATGGAGGTGGTACCCTaGCAAGCCCAGGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKLVSGPRVSDSKVPAAAMEVVP*QAQGTH Trigger: ATGAGTGCCCTGGGCTTGCCAGGGTACCACCTCCAT...TGCAGCAGCTGGAACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCAACAGAAGCAAGACCTaGGCGTTGAGACTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRNRSKT*ALRLPL Trigger: CAGTGGCAGTCTCAACGCCCAGGTCTTGCTTCTGTT...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | ATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTAATGCTCTGCAGGAAGTaGGCAACCATGATCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRQGRLWRGTKLVSGPRVMLCRK*ATMITD Trigger: ATCAGTGATCATGGTTGCTCACTTCCTGCAGAGCAT...TACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCCTCCAAGGGCTAGGGTaGCAGGCAGGGGACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVLQGLG*QAGDAS Trigger: AGATGCGTCCCCTGCCTGTCACCCTAGCCCTTGGAG...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | GGTGGGCCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCTCCAAGGGCTAGGGTaGCAGGCAGGGGACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPILWSFCGQRFNSLILLQGLG*QAGDAS Trigger: AGATGCGTCCCCTGCCTGTCACCCTAGCCCTTGGAG...GAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR GCA 90 bp | TGGGAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAAGCTCGCAGCCGTTCTaGCAACAGAAGCAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEIIVGLMAVLGTSTRYLSSQPF*QQKQDL Trigger: CAGGTCTTGCTTCTGTTGGCAGAACGGCTGCGAGCT...TAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
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| CDS-3UTR GCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRYSPSN*HVRNLA Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGTATCCCCCACCACAGTaGGGAACACCTCTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCGQRFNSLILPSRGKEYPPPQ*GTPLWG Trigger: GCCCCACAGAGGTGTTCCCCACTGTGGTGGGGGATA...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGTTCCAGCTGCTGCATTCCCAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLVSGPRVSDSKVPAAAFPGSE*LCSHLP Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTGGGAA...TGCAGCAGCTGGAACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| 3UTR CAA 72 bp | CTCGGACCACCCCATCCATCGCACACAGTATCCAGATaGCTCAGACTGCTGTGTTGTCTCCCTTTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPPHPSHTVSR*LRLLCCLPFPS Trigger: ACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGCGATGGATGGGGTGGTCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTTGTCATCTCTCTTGTGCTCAGAACCTTGTTaGCAACCAGCTTCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMAERCSLLVSTALSSLLCSEPC*QPASRL Trigger: AAGGCGTGAAGCTGGTTGTCAACAAGGTTCTGAGCA...CAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR TCA 90 bp | GCACACAGTATCCAGATTGCTCAGACTGCTGTGTTGTCTCCCTTTTCCAAGTTGGCACAAGCCGATGGGTaGTGCTCTGCAGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSIQIAQTAVLSPFSKLAQADG*CSAGSE Trigger: CTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGC...CAACTTGGAAAAGGGAGACAACACAGCAGTCTGAGCAATCTGGATACTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTCCTGAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAATGCATGGGCCCCACCTaGCCCAACATTCAACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLRLVTFLTSHLSDFSKCMGPT*PNIQRS Trigger: GCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCA...TTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAACAGTGTTGTGCATGGGCCCCACCTaGCCCAACATTCAACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLKALGSGKTRHNEGTVLCMGPT*PNIQRS Trigger: GCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCA...CAACACTGTTCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTTGTTTCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MGDYSGADGSIGNLNPLPCFASD*GRLQGL Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACA...AGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCTCTAATCTGTTTCGCCAGTaGTTGAGGAAGGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSLVQQCRLRHLCHLRSNLFRQ*LRKAPR Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATT...AGAGCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | GCCATACAGCTTATGGGAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCCCTAGCACAAGCCGATaGGTGATGCTCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AIQLMGDYSGADGSIGNLPSTSR*VMLCRK Trigger: CTTCCTGCAGAGCATCACCCATCGGCTTGTGCTAGG...GAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTCCCATAAGCTGTATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGTTCCAGCTGCTGCAAATCTGTTTCGCCAGTaGTTGAGGAAGGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKLVSGPRVSDSKVPAAANLFRQ*LRKAPR Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATT...TGCAGCAGCTGGAACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAGATGCAAAGTCGTAGCTCATGGCCTGGGTGTGACAGCTTTCCTGAGACTTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEMQSRSSWPGCDSFPETYSPSN*HVRNLA Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...AGTCTCAGGAAAGCTGTCACACCCAGGCCATGAGCTACGACTTTGCATCTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CCA 90 bp | TTTACACTTGACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAGGTTCCTCTCGACGGTaGCTCCGGCGGGGTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FTLDLKALGSGKTRHNEGGSSRR*LRRGKV Trigger: TACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACC...TCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTCAAGTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCTTCCTCCTTCCTTATCTGGGGAGGTGGAGTGGCCCCAACTGAAGGGAGCCTTCCATCTGTGCTaGGAATACATCTTTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLPPSLSGEVEWPQLKGAFHLC*EYIFAQ Trigger: TTGTGCAAAGATGTATTCCCAGCACAGATGGAAGGC...TCCCTTCAGTTGGGGCCACTCCACCTCCCCAGATAAGGAAGGAGGAAGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR CCA 90 bp | CACGGACAGAGCCTAGTTCAACAGTGCAGGCTCAGACATCTATGCCACCTTCGCGCCTTCCATCTGTGCTaGGAATACATCTTTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HGQSLVQQCRLRHLCHLRAFHLC*EYIFAQ Trigger: TTGTGCAAAGATGTATTCCCAGCACAGATGGAAGGC...GCGAAGGTGGCATAGATGTCTGAGCCTGCACTGTTGAACTAGGCTCTGTCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | AAGCCAGACACATCCCGTAGTCCCTCTCCTTTACTCCAGAGCCATACAGCTTATAACAGAAGCAAGACCTaGGCGTTGAGACTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KPDTSRSPSPLLQSHTAYNRSKT*ALRLPL Trigger: CAGTGGCAGTCTCAACGCCCAGGTCTTGCTTCTGTT...ATAAGCTGTATGGCTCTGGAGTAAAGGAGAGGGACTACGGGATGTGTCTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005817.9 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | CTGATGGAGAACAGATCTCCAGAATCCCACGATGGGCAGGTTCCTCAGCAAAAAGCCATGTCAGGAACTTaGCCTGCTGTGTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMENRSPESHDGQVPQQKAMSGT*PAVSGR Trigger: TCTTCCAGACACAGCAGGCCAAGTTCCTGACATGGC...TTTTTGCTGAGGAACCTGCCCATCGTGGGATTCTGGAGATCTGTTCTCCATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| CDS-3UTR CCA 90 bp | TTTACACTTGACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGACAGCCAGAGTCAAGATaGCCCCCTCTTCTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTLDLKALGSGKTRHNEGQPESR*PPLLLA Trigger: GGCCAGGAGAAGAGGGGGCCATCTTGACTCTGGCTG...TCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTCAAGTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | GAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTAACTTGCTCAGAACCTTGTTaGCAACCAGCTTCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIIVGLMAVLGTSTRYLTCSEPC*QPASRL Trigger: AAGGCGTGAAGCTGGTTGTCAACAAGGTTCTGAGCA...AGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGATGCAAAGTCGTAGCTCATGGCCTGGGTGTGACAGCTTTCCTGAGACTGGAAGTGAGCAACCATaGTCACTGATTCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VEMQSRSSWPGCDSFPETGSEQP*SLIPQS Trigger: TGATTGGGGAATCAGTGATCATGGTTGCTCACTTCC...AGTCTCAGGAAAGCTGTCACACCCAGGCCATGAGCTACGACTTTGCATCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGATGGAGGACGCAGTCCATTGTTTCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TENFFCGPLCYKMEDAVHCFASD*GRLQGL Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACA...ATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR GCA 90 bp | CCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCTCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PILWSFCGQRFNSLILPSSLHNR*SSSKLP Trigger: CGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGA...GGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| CDS-3UTR CCA 90 bp | ACACAACCGCCTTCTAGAACTGGATCTAGAAGGCCTCACCTTCAGATTCTATACGCCATGTCAGGAACTTaGCCTGCTGTGTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQPPSRTGSRRPHLQILYAMSGT*PAVSLW Trigger: CCACAGAGACACAGCAGGCCAAGTTCCTGACATGGC...GTATAGAATCTGAAGGTGAGGCCTTCTAGATCCAGTTCTAGAAGGCGGTTGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111326.8 |
||
| 3UTR CAA 72 bp | AGTATAAACAATGCATACTCCTATGAACTTCAGCGCTaGGAGGAACTGTCTGCTATGACGCCGCTGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SINNAYSYELQR*EELSAMTPLLG Trigger: CCCGAGCAGCGGCGTCATAGCAGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| 3UTR CAA 72 bp | ATGGCTGAAAGGTGCTCGCTGCTGGTCTCAACAGCTTaGTCATCTCTCTTGCCTGACACAGTGATACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAERCSLLVSTA*SSLLPDTVILS Trigger: TGACAGTATCACTGTGTCAGGCAAGAGAGATGACAAAGCTGTTGAGACCAGCAGCGAGCACCTTTCAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGCTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGGGAAGTGAGCAACCATaGTCACTGATTCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLADLRSINNAYSYELQGSEQP*SLIPQS Trigger: TGATTGGGGAATCAGTGATCATGGTTGCTCACTTCC...CTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGGAGGTCAGCCAGCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR GCA 90 bp | TTTACACTTGACCTCAAAGCCCTGGGTTCAGGAAAAACTAGGCACAATGAAGGAGTCAGGAACTTGGCCTaGTGTGTCTCTGTGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTLDLKALGSGKTRHNEGVRNLA*CVSVGL Trigger: TAGCCCCACAGAGACACAGCAGGCCAAGTTCCTGAC...TCCTTCATTGTGCCTAGTTTTTCCTGAACCCAGGGCTTTGAGGTCAAGTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111326.8 |
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| CDS-3UTR CCA 90 bp | CTACGTTCTGTCTTCAAACAGAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGAATGGAGGTGGTACCCTaGCAAGCCCAGGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSVFKQRISSVGLFATRMEVVP*QAQGTH Trigger: ATGAGTGCCCTGGGCTTGCCAGGGTACCACCTCCAT...TCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTCTGTTTGAAGACAGAACGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGATGCTCTGCAGGAAGTaGGCAACCATGATCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFCGQRFNSLILPSRGKEMLCRK*ATMITD Trigger: ATCAGTGATCATGGTTGCTCACTTCCTGCAGAGCAT...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGTTCCAGCTGCTGCACCTGAACCTGTTCATTaGCCTTGTGGTAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLVSGPRVSDSKVPAAAPEPVH*PCGNNL Trigger: CAAGTTATTACCACAAGGCCAATGAACAGGTTCAGG...TGCAGCAGCTGGAACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCAATCTGTTTCGCCAGTaGTTGAGGAAGGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PILWSFCGQRFNSLILPSNLFRQ*LRKAPR Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATT...GGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR GCA 90 bp | CCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PILWSFCGQRFNSLILPSYSPSN*HVRNLA Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...GGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGCTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCCTGAACCTGTTCATTaGCCTTGTGGTAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLADLRSINNAYSYELQPEPVH*PCGNNL Trigger: CAAGTTATTACCACAAGGCCAATGAACAGGTTCAGG...CTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGGAGGTCAGCCAGCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CCA 90 bp | GATAGACCTAAGTCTAAAGTGCCCTTGTTTTCTACCCGACACAGGTCCCTAACCCCTGAACCTGTTCATTaGCCTTGTGGTAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRPKSKVPLFSTRHRSLTPEPVH*PCGNNL Trigger: CAAGTTATTACCACAAGGCCAATGAACAGGTTCAGG...GGTTAGGGACCTGTGTCGGGTAGAAAACAAGGGCACTTTAGACTTAGGTCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| 3UTR CAA 72 bp | CAGATCTCCCTTCTCAAGGGAGCGGCTGTGGAAATATaGCATATCTCACTCAACACTACGTTCTGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QISLLKGAAVEI*HISLNTTFCLQ Trigger: TTGAAGACAGAACGTAGTGTTGAGTGAGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAGGGAGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| CDS CCA 90 bp | AGCTCGTCGAAGCTCCCGGGGTTGGGCAGCGGTTCCTCTCGACGGTaGCTCCGGCGGGGTAAAGTACCCATCGGTGCCAGGCCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSKLPGLGSGSSRR*LRRGKVPIGARPRV Trigger: CACCCTGGGCCTGGCACCGATGGGTACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000143405.2 ENSMUST00000147246.2 |
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| CDS CCA 90 bp | CTGTGTCTTTGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTTaGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGGGGTAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCLCTTGAARRSSRG*AAVPLDGGSGGVKY Trigger: GTACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGACACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LERVQRWTPHGNQQEGAWSKLPG*GSGSSR Trigger: TCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGA...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| CDS CCA 90 bp | ATACATCTTTGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTTaGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGGGGTAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IHLCTTGAARRSSRG*AAVPLDGGSGGVKY Trigger: GTACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGATGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS CCA 90 bp | GCTAAGCTGCCAGTCCCCTGCATAGGCGGTATGGAGGTGGTACCCTaGCAAGCCCAGGGCACTCATGTGCACAGTATGAGCCACCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKLPVPCIGGMEVVP*QAQGTHVHSMSHLE Trigger: TTCCAGGTGGCTCATACTGTGCACATGAGTGCCCTGGGCTTGCCAGGGTACCACCTCCATACCGCCTATGCAGGGGACTGGCAGCTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGTGCCATGTCAGGAACTaGGCCTGCTGTGTCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LERVQRWTPHGNQQEGAWCHVRN*ACCVFA Trigger: TGCAAAGACACAGCAGGCCAAGTTCCTGACATGGCA...CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAATGGCTGCTCAGAACCTaGTTGACAACCAGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: EVGNHRAKVVLRKHRGWEWLLRT*LTTSFT Trigger: CGTGAAGCTGGTTGTCAACAAGGTTCTGAGCAGCCA...TTCCCATCCCCTGTGTTTCCGGAGAACAACTTTGGCCCTGTGGTTGCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CAA 90 bp | CTTCTCAAGGGAGCGGCTGTGGAAATATTGCATATCTCACTCAACACTACGTTCTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKGAAVEILHISLNTTFSKLPG*GSGSSR Trigger: TCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGA...GAACGTAGTGTTGAGTGAGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005817.9 |
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| CDS-3UTR CAA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KTRHNEGTVLIEALLGYVSKLPG*GSGSSR Trigger: TCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGA...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000143405.2 |
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| CDS-3UTR CAA 90 bp | TCATGGCCTGGGTGTGACAGCTTTCCTGAGACTGGTGACATTCCTTACCTCTCACCTTGTGGTAATAACTaGCATGGGCCCCACCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SWPGCDSFPETGDIPYLSPCGNN*HGPHLT Trigger: GGTCAGGTGGGGCCCATGCAAGTTATTACCACAAGG...TGAGAGGTAAGGAATGTCACCAGTCTCAGGAAAGCTGTCACACCCAGGCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CAA 90 bp | GAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTCGTATCTTGTAGCCTaGTATTTGCCTCAAACTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ERVQRWTPHGNQQEGAWESYLVA*YLPQTL Trigger: TAGAGTTTGAGGCAAATACAAGGCTACAAGATACGA...CTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CAA 90 bp | ATGGGAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTCTGCTCAGAACCTTGTaGACAACCAGCTTCACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MGDYSGADGSIGNLNPLPLLRTL*TTSFTP Trigger: AGGCGTGAAGCTGGTTGTCAACAAGGTTCTGAGCAG...AGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CAA 90 bp | TGGGAGATTATAGTGGGGCTGATGGCAGTATTGGGAACCTCAACCCGCTACCTATGGCTGCTCAGAACCTaGTTGACAACCAGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: WEIIVGLMAVLGTSTRYLWLLRT*LTTSFT Trigger: CGTGAAGCTGGTTGTCAACAAGGTTCTGAGCAGCCA...TAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCACTATAATCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
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| CDS-3UTR CAA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGCCTTGTGGTAATAACTaGCATGGGCCCCACCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SFCGQRFNSLILPSRGKEPCGNN*HGPHLT Trigger: GGTCAGGTGGGGCCCATGCAAGTTATTACCACAAGG...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGTGCCATGTCAGGAACTaGGCCTGCTGTGTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFCGQRFNSLILPSRGKECHVRN*ACCVSV Trigger: CACAGAGACACAGCAGGCCAAGTTCCTGACATGGCA...CTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111326.8 |
||
| CDS-3UTR CAA 90 bp | GAGACTGGTGACATTCCTTACCTCTCACCTCTCCGACTTTTCCAAACTAAAGTCCTGCTCAGAACCTTGTaGACAACCAGCTTCACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETGDIPYLSPLRLFQTKVLLRTL*TTSFTP Trigger: AGGCGTGAAGCTGGTTGTCAACAAGGTTCTGAGCAG...GACTTTAGTTTGGAAAAGTCGGAGAGGTGAGAGGTAAGGAATGTCACCAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTAGGCACAATGAAGGAACAGTGTTGATAGAGGCCCTTCTTGGGTATGTCTGGCTGCTCAGAACCTaGTTGACAACCAGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KTRHNEGTVLIEALLGYVWLLRT*LTTSFT Trigger: CGTGAAGCTGGTTGTCAACAAGGTTCTGAGCAGCCA...GACATACCCAAGAAGGGCCTCTATCAACACTGTTCCTTCATTGTGCCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCTCGTATCTTGTAGCCTaGTATTTGCCTCAAACTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGPILWSFCGQRFNSLILSYLVA*YLPQTL Trigger: TAGAGTTTGAGGCAAATACAAGGCTACAAGATACGA...GAGGATTAAAGAGTTAAATCTCTGGCCACAGAAAGACCAAAGAATGGGCCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 |
||
| CDS CCA 72 bp | TGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTTaGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTTGAARRSSRG*AAVPLDGGSGG Trigger: CCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000143405.2 ENSMUST00000147246.2 |
||
| CDS CAA 72 bp | TTGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHNRCSSSKLPG*GSGSSRRWLRR Trigger: CCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000143405.2 ENSMUST00000147246.2 |
||
| CDS CCA 72 bp | AAGCTCCCGGGGTTGGGCAGCGGTTCCTCTCGACGGTaGCTCCGGCGGGGTAAAGTACCCATCGGTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLPGLGSGSSRR*LRRGKVPIGAR Trigger: CCTGGCACCGATGGGTACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000143405.2 ENSMUST00000147246.2 |
||
| CDS CAA 90 bp | GCTGTGTCTTTGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGGGGTAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: AVSLHNRCSSSKLPG*GSGSSRRWLRRGKV Trigger: TACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGACACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| CDS GCA 72 bp | CTGCTGTGTCTCTGTGGGGCTAAGCTGCCAGTCCCCTaGATAGGCGGTATGGAGGTGGTACCCTGGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLCLCGAKLPVP*IGGMEVVPWQA Trigger: GGCTTGCCAGGGTACCACCTCCATACCGCCTATGCAGGGGACTGGCAGCTTAGCCCCACAGAGACACAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111326.8 |
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| CDS GCA 72 bp | TCAGGAACTTGGCCTGCTGTGTCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCGGGGTTGGGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SGTWPAVSLHNR*SSSKLPGLGSG Trigger: ACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGACACAGCAGGCCAAGTTCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143405.2 |
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| CDS CAA 90 bp | AATACATCTTTGCACAACCGGTGCAGCTCGTCGAAGCTCCCGGGGTaGGGCAGCGGTTCCTCTCGACGGTGGCTCCGGCGGGGTAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: NTSLHNRCSSSKLPG*GSGSSRRWLRRGKV Trigger: TACTTTACCCCGCCGGAGCCACCGTCGAGAGGAACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGATGTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS CCA 72 bp | CCAGTCCCCTGCATAGGCGGTATGGAGGTGGTACCCTaGCAAGCCCAGGGCACTCATGTGCACAGTATGAGC | + |
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Preference number: 6 (lower is better) Translates to: PVPCIGGMEVVP*QAQGTHVHSMS Trigger: GCTCATACTGTGCACATGAGTGCCCTGGGCTTGCCAGGGTACCACCTCCATACCGCCTATGCAGGGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS GCA 72 bp | TCCATCTGTGCTGGGAATACATCTTTGCACAACCGGTaGAGCTCGTCGAAGCTCCCGGGGTTGGGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SICAGNTSLHNR*SSSKLPGLGSG Trigger: ACCGCTGCCCAACCCCGGGAGCTTCGACGAGCTGCACCGGTTGTGCAAAGATGTATTCCCAGCACAGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS GCA 72 bp | TACTCGCCATCAAACTGCCATGTCAGGAACTTGGCCTaGTGTGTCTCTGTGGGGCTAAGCTGCCAGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: YSPSNCHVRNLA*CVSVGLSCQSP Trigger: AGGGGACTGGCAGCTTAGCCCCACAGAGACACAGCAGGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111326.8 |
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| CDS CCA 72 bp | CTTGTTGACAACCAGCTTCACGCCTTCCATCTGTGCTaGGAATACATCTTTGCACAACCGGTGCAGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LVDNQLHAFHLC*EYIFAQPVQLV Trigger: GACGAGCTGCACCGGTTGTGCAAAGATGTATTCCCAGCACAGATGGAAGGCGTGAAGCTGGTTGTCAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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| CDS GCA 72 bp | AACCTTGTTGACAACCAGCTTCACGCCTTCCATCTGTaGTGGGAATACATCTTTGCACAACCGGTGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: NLVDNQLHAFHL*WEYIFAQPVQL Trigger: GAGCTGCACCGGTTGTGCAAAGATGTATTCCCAGCACAGATGGAAGGCGTGAAGCTGGTTGTCAACAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005817.9 ENSMUST00000111326.8 ENSMUST00000111327.8 ENSMUST00000138184.8 ENSMUST00000147246.2 |
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