Pregenerated sensors for TOMM40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002984Ensembl transcript IDs: ENSMUST00000032555.10, ENSMUST00000093552.12, ENSMUST00000172705.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTACAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATaGCCTTCAGATCCCAGGACTCCCTCCGGGACCCCAGGCCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: VYSRLCASAWALTIE*PSDPRTPSGTPGPL Trigger: CAGGGGGCCTGGGGTCCCGGAGGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTGTACAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR GCA 90 bp | GGAGGGGTGGAGGGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTaGCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: GGVEGEVTGGSALLC*PQEDIKSFLSEPVY Trigger: GTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCCCTCCACCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR GCA 90 bp | TATGGAGGGGTGGAGGGGGAAGTGACAGGCGGCTCGGCGCTCCTCTaGTGCCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: YGGVEGEVTGGSALL*CPQEDIKSFLSEPV Trigger: CACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCCCTCCACCCCTCCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCGGCGCTGGGGATCCTTaGGCATGGGAGGTCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QPPLRLCLGAHNRMPFRSGAGDP*AWEVPS Trigger: GGAGGGGACCTCCCATGCCCAAGGATCCCCAGCGCC...GGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGCAGCCGGCCCAGCGATaGTCTGCAGAGGAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: GEVTGGSALLCCPQEDIKQPAQR*SAEEGQ Trigger: CTGTCCTTCCTCTGCAGACCATCGCTGGGCCGGCTG...CTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACTCCCTCCGGGACTGGGCACTGTCCCCTaGCGCTGGGGATCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPGRSQSNALQIPGLPPGLGTVP*RWGSLG Trigger: GCCCAAGGATCCCCAGCGCCAGGGGACAGTGCCCAG...TCCCGGAGGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACCAGCCGGCCCAGCGATaGTCTGCAGAGGAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: PLRLCLGAHNRMPFRSQDQPAQR*SAEEGQ Trigger: CTGTCCTTCCTCTGCAGACCATCGCTGGGCCGGCTG...GTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR GCA 90 bp | GACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGTCTTTCCTTCCCCTCCTTCCCACTaGCCCAACCCCAAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: DRRLGAPLLPSGGHQVFPSPPSH*PNPKRE Trigger: CTCTCTCTTGGGGTTGGGGCAGTGGGAAGGAGGGGA...AGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR GCA 90 bp | GGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGGCGCTCACAATCGAATaGCCTTCAGATCCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: GEVTGGSALLCCPQEDIKALTIE*PSDPRT Trigger: AGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGC...CTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCCTGGGCACTGTCCCCTaGCGCTGGGGATCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PQEDIKSFLSEPVYSRLCLGTVP*RWGSLG Trigger: GCCCAAGGATCCCCAGCGCCAGGGGACAGTGCCCAG...GCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCCTCTTCCCCTCCTTCCCACTaGCCCAACCCCAAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EDIKSFLSEPVYSRLCASSPPSH*PNPKRE Trigger: CTCTCTCTTGGGGTTGGGGCAGTGGGAAGGAGGGGA...AGAGGCGCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCCTCTGCGCTCACAATCGAATaGCCTTCAGATCCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: EDIKSFLSEPVYSRLCASALTIE*PSDPRT Trigger: AGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGC...AGAGGCGCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR GCA 72 bp | CGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATaGCCTTCAGATCCCAGGACTCCCTCCGGGACCCCA | + |
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Preference number: 3 (lower is better) Translates to: RLCASAWALTIE*PSDPRTPSGTP Trigger: TGGGGTCCCGGAGGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CAA 90 bp | GTACAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATGGCGCTGGGGATCCTaGGGCATGGGAGGTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: VQPPLRLCLGAHNRMPFRWRWGS*GMGGPL Trigger: GAGGGGACCTCCCATGCCCAAGGATCCCCAGCGCCA...TCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTGTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCTGGCGCTGGGGATCCTaGGGCATGGGAGGTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PQEDIKSFLSEPVYSRLCWRWGS*GMGGPL Trigger: GAGGGGACCTCCCATGCCCAAGGATCCCCAGCGCCA...GCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR GCA 72 bp | GAGGGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTaGCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: EGEVTGGSALLC*PQEDIKSFLSE Trigger: CTCAGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR GCA 72 bp | GTGGAGGGGGAAGTGACAGGCGGCTCGGCGCTCCTCTaGTGCCCTCAGGAGGACATCAAGTCTTTCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VEGEVTGGSALL*CPQEDIKSFLS Trigger: AGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCCCTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| 3UTR CCA 72 bp | GGAGCCCCACTGTTTGACAAGCCACCCAGAGTAATTTaGAGCTGCACAGAGTCCCCGCCCACTCCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GAPLFDKPPRVI*SCTESPPTPPA Trigger: TGCTGGTGGAGTGGGCGGGGACTCTGTGCAGCTCCAAATTACTCTGGGTGGCTTGTCAAACAGTGGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172705.2 |
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| 3UTR GCA 72 bp | CCACTGTTTGACAAGCCACCCAGAGTAATTTGGAGCTaGACAGAGTCCCCGCCCACTCCACCAGCACATGTT | + |
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Preference number: 3 (lower is better) Translates to: PLFDKPPRVIWS*TESPPTPPAHV Trigger: AACATGTGCTGGTGGAGTGGGCGGGGACTCTGTGCAGCTCCAAATTACTCTGGGTGGCTTGTCAAACAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172705.2 |
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| CDS-3UTR CCA 90 bp | GTACAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGACGTAGGAGGCGGCGGTaGCCCTGCGGGCGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VQPPLRLCLGAHNRMPFRRRRRR*PCGRRA Trigger: AGCTCTCCGCCCGCAGGGCCACCGCCGCCTCCTACG...TCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTGTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CCA 90 bp | TGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACTCCCCGTAGGAGGCGGCGGTaGCCCTGCGGGCGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CASAWALTIECPSDPRTPRRRRR*PCGRRA Trigger: AGCTCTCCGCCCGCAGGGCCACCGCCGCCTCCTACG...GGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR TCA 90 bp | CTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACTCCCTCCGGCGAGCGGCGGCAGAGTaGAGCCTGGCGGCGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LCLGAHNRMPFRSQDSLRRAAAE*SLAAKE Trigger: CTCCTTCGCCGCCAGGCTTCACTCTGCCGCCGCTCG...CCGGAGGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CCA 90 bp | GGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGCTGCGGGCGGAGAGCTaGCAGCCAACACGTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GEVTGGSALLCCPQEDIKLRAES*QPTRSP Trigger: TGGGGAACGTGTTGGCTGCCAGCTCTCCGCCCGCAG...CTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CCA 90 bp | GGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGTCCTGCGGGCGGAGAGCTaGCAGCCAACACGTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSDRRLGAPLLPSGGHQVLRAES*QPTRSP Trigger: TGGGGAACGTGTTGGCTGCCAGCTCTCCGCCCGCAG...GACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR TCA 90 bp | GAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCCTCTCGAGCGGCGGCAGAGTaGAGCCTGGCGGCGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EDIKSFLSEPVYSRLCASRAAAE*SLAAKE Trigger: CTCCTTCGCCGCCAGGCTTCACTCTGCCGCCGCTCG...AGAGGCGCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CCA 90 bp | GTACAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGAAGGCCTGGGCTCAGCTaGTGGATGACCTGTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: VQPPLRLCLGAHNRMPFRRPGLS*WMTCAL Trigger: CAATGCACAGGTCATCCACCAGCTGAGCCCAGGCCT...TCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR TCA 90 bp | GCTGCCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTGGCCATTTTGGACCTaGGGCCTGGGCTCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: AALRRTSSLSFLSLCTAAWPFWT*GLGSAG Trigger: ACCAGCTGAGCCCAGGCCTCAGGTCCAAAATGGCCA...GGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR GCA 90 bp | CCTGTGTACAGCCGCCTCTGCGCCTCTGCCTGGGCGCTCACAATCGAATGCCCTCTGGTGGATGACCTGTaGATTGAGGCTGCCACTATT | + |
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Preference number: 4 (lower is better) Translates to: PVYSRLCASAWALTIECPLVDDL*IEAATI Trigger: AATAGTGGCAGCCTCAATGCACAGGTCATCCACCAG...AGGGCATTCGATTGTGAGCGCCCAGGCAGAGGCGCAGAGGCGGCTGTACACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR TCA 90 bp | CCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCTGGCCATTTTGGACCTaGGGCCTGGGCTCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PQEDIKSFLSEPVYSRLCWPFWT*GLGSAG Trigger: ACCAGCTGAGCCCAGGCCTCAGGTCCAAAATGGCCA...GCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR GCA 90 bp | GACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGTCTTTCCTCTGGTGGATGACCTGTaGATTGAGGCTGCCACTATT | + |
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Preference number: 4 (lower is better) Translates to: DRRLGAPLLPSGGHQVFPLVDDL*IEAATI Trigger: AATAGTGGCAGCCTCAATGCACAGGTCATCCACCAG...AGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CCA 90 bp | CTCTGCTGCCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCCTGGGCTCAGCTGGTaGATGACCTGTGCATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LCCPQEDIKSFLSEPVYSPGLSW*MTCALR Trigger: CCTCAATGCACAGGTCATCCACCAGCTGAGCCCAGG...GCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACTCCCTCCGGAACCACGGCCAGTGCTaGACCCAGTGCCCAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LCLGAHNRMPFRSQDSLRNHGQC*TQCPGR Trigger: GCGGCCTGGGCACTGGGTCAAGCACTGGCCGTGGTT...CCGGAGGGAGTCCTGGGATCTGAAGGGCATTCGATTGTGAGCGCCCAGGCAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CAA 90 bp | GGGGAAGTGACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGACCAAGACATCTGGGTaGCCCAGGGTGACAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GEVTGGSALLCCPQEDIKTKTSG*PRVTAA Trigger: AGCTGCTGTCACCCTGGGCAACCCAGATGTCTTGGT...CTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTCACTTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CAA 90 bp | GAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCCTCTAACCACGGCCAGTGCTaGACCCAGTGCCCAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: EDIKSFLSEPVYSRLCASNHGQC*TQCPGR Trigger: GCGGCCTGGGCACTGGGTCAAGCACTGGCCGTGGTT...AGAGGCGCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CAA 90 bp | GACAGGCGGCTCGGCGCTCCTCTGCTGCCCTCAGGAGGACATCAAGTCTTTCCTTGGATGACCTGTGCATaGAGGCTGCCACTATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: DRRLGAPLLPSGGHQVFPWMTCA*RLPLLS Trigger: GGACAATAGTGGCAGCCTCAATGCACAGGTCATCCA...AGGAAAGACTTGATGTCCTCCTGAGGGCAGCAGAGGAGCGCCGAGCCGCCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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| CDS-3UTR CAA 90 bp | GAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCCTCTTGGATGACCTGTGCATaGAGGCTGCCACTATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: EDIKSFLSEPVYSRLCASWMTCA*RLPLLS Trigger: GGACAATAGTGGCAGCCTCAATGCACAGGTCATCCA...AGAGGCGCAGAGGCGGCTGTACACAGGCTCAGAAAGGAAAGACTTGATGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032555.10 ENSMUST00000093552.12 |
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