Pregenerated sensors for TOMM34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018322Ensembl transcript IDs: ENSMUST00000018466.4, ENSMUST00000109384.10
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTCAAGGACAGGGTGCAGACAGCAGCTGTCTCCTCGAGGAGATaGCAGGCAGCCTTGGAGAACCAGCTCAACAGGCCGCTGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CVKDRVQTAAVSSRR*QAALENQLNRPLWL Trigger: CAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTTGACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR GCA 90 bp | GTTGATTTTGCACTCCCTTGGCGGCATGCTGGGCATTGGGGCAGATaGAAGGGAGGCCCTGGCTTCTCTGGGAAGGTCAAGTTCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: VDFALPWRHAGHWGR*KGGPGFSGKVKFRV Trigger: GACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGGAGTGCAAAATCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR CCA 90 bp | CAAAGTGGGGTTGATTTTGCACTCCCTTGGCGGCATGCTGGGCATTaGGGCAGATGCAAGGGAGGCCCTGGCTTCTCTGGGAAGGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: QSGVDFALPWRHAGH*GRCKGGPGFSGKVK Trigger: CTTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGGAGTGCAAAATCAACCCCACTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR TCA 90 bp | CAGTCTGTGCATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTaGCAAGGGCCAGGCAGAAGCAAGCGAATGAGGCCAGGGCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: QSVHIWVRDSCQGLC*QGPGRSKRMRPGLL Trigger: CAACAGCCCTGGCCTCATTCGCTTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCACAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR GCA 90 bp | ACTGCAGAGCTATGGCGGCAGAGGAAGTCACAGGCACCCAGTCTGTaGATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: TAELWRQRKSQAPSL*ISGSGTVAKDCVDK Trigger: CTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCACAGACTGGGTGCCTGTGACTTCCTCTGCCGCCATAGCTCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCTCCAAGGGTTAGGCTCTGCCTTCCCACAAAGGGCCTGGACTAAAGGCCGGCATGCTGGGCATTaGGGCAGATGCAAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QSLQGLGSAFPQRAWTKGRHAGH*GRCKGG Trigger: GCCTCCCTTGCATCTGCCCCAATGCCCAGCATGCCG...GCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGACAGGGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGCCCTTGGCGGCATGCTaGGCATTGGGGCAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: KDRVQTAAVSSRRWQAALPLAAC*ALGQMQ Trigger: TTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGG...CAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCAGAAGCAAGGGCATTGGGGCAGATaGAAGGGAGGCCCTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGQGQLPRTVLTRARQKQGHWGR*KGGPGF Trigger: GAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCC...TTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCTCCAAGGGTTAGGCTCTGCCTTCCCACAAAGGGCCTGGACTAAAGGCCTGTCAGCACTCAGGTaGACTGCAGAGCTATGGCGG | + |
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Preference number: 2 (lower is better) Translates to: QSLQGLGSAFPQRAWTKGLSALR*TAELWR Trigger: CCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAG...GCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGAGCACTCAGGTGAACTaGAGAGCTATGGCGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VQTAAVSSRRWQAALENQSTQVN*RAMAAE Trigger: CTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCT...CTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAAGGCCCTGGCTTCTCTaGGAAGGTCAAGTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GADSSCLLEEMAGSLGEPRPWLL*EGQVQG Trigger: ACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCT...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCTCCAAGGGTTAGGCTCTGCCTTCCCACAAAGGGCCTGGACTAAAGGCGTCTCCTCGAGGAGATaGCAGGCAGCCTTGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QSLQGLGSAFPQRAWTKGVSSRR*QAALEN Trigger: GTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGAC...GCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGGAGTCAAAGTGGGGTTaGTTTTGCACTCCCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: VQTAAVSSRRWQAALENQESKWG*FCTPLA Trigger: CGCCAAGGGAGTGCAAAATCAACCCCACTTTGACTC...CTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | GCGGACGAGCAAGCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATCCCTTGGCGGCATGCTaGGCATTGGGGCAGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: ADEQALLACQHSGELQSYPLAAC*ALGQMQ Trigger: TTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGG...ATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGCTTGCTCGTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATGGGCATTGGGGCAGATaGAAGGGAGGCCCTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLLWGKRLSSCSDWRDTNGHWGR*KGGPGF Trigger: GAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCC...ATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGAGGCCCTGGCTTCTCTaGGAAGGTCAAGTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: WRDTNLKEASLPIAGGIWRPWLL*EGQVQG Trigger: ACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCT...CCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | TGCATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCAATGCAAGGGAGGCCCTaGCTTCTCTGGGAAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CISGSGTVAKDCVDKGQAMQGRP*LLWEGQ Trigger: TTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCAT...TGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGGCTCTTTGAACATCGTAATGCAAGGGAGGCCCTaGCTTCTCTGGGAAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QGGLSPHCRRNLGSLNIVMQGRP*LLWEGQ Trigger: TTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCAT...TACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGCAGTCTGTGCATATCTaGGTCAGGGACAGTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: WRDTNLKEASLPIAGGIWQSVHI*VRDSCQ Trigger: TTGGCAACTGTCCCTGACCCAGATATGCACAGACTG...CCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR CCA 72 bp | GTTGATTTTGCACTCCCTTGGCGGCATGCTGGGCATTaGGGCAGATGCAAGGGAGGCCCTGGCTTCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VDFALPWRHAGH*GRCKGGPGFSG Trigger: CCCAGAGAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGGAGTGCAAAATCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CAA 90 bp | CCTTGGAGAACCAGCTCAACAGGCCGCTGTGGCTGCGGACGAGCAAGCACTTCTTTGCCAAGGACTGTGTaGACAAGGGCCAGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PWRTSSTGRCGCGRASTSLPRTV*TRARQK Trigger: CTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAA...AGAAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR CCA 72 bp | CTCCAAGGGTTAGGCTCTGCCTTCCCACAAAGGGCCTaGACTAAAGGCACTGGGGCTCAACACAGGACACTG | + |
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Preference number: 3 (lower is better) Translates to: LQGLGSAFPQRA*TKGTGAQHRTL Trigger: CAGTGTCCTGTGTTGAGCCCCAGTGCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR GCA 72 bp | CTATGGCGGCAGAGGAAGTCACAGGCACCCAGTCTGTaGATATCTGGGTCAGGGACAGTTGCCAAGGACTGT | + |
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Preference number: 3 (lower is better) Translates to: LWRQRKSQAPSL*ISGSGTVAKDC Trigger: ACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCACAGACTGGGTGCCTGTGACTTCCTCTGCCGCCATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR TCA 72 bp | CATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTaGCAAGGGCCAGGCAGAAGCAAGCGAATGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: HIWVRDSCQGLC*QGPGRSKRMRP Trigger: TGGCCTCATTCGCTTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CAA 90 bp | TTAAGTTCCTGCTCAGACTGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCTTGCCAAGGACTGTGTaGACAAGGGCCAGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LSSCSDWRDTNLKEASLPLPRTV*TRARQK Trigger: CTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAA...GGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR CCA 72 bp | CTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTaGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LLWGKRLSSCSD*RDTNLKEASLP Trigger: GGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR-3UTR CAA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAAAAAGAGTCCTGTGCTaGTCTGTAATGGACTTAATC | + |
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Preference number: 3 (lower is better) Translates to: GADSSCLLEEMAGSLGEPKRVLC*SVMDLI Trigger: GATTAAGTCCATTACAGACAAGCACAGGACTCTTTT...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CCA 90 bp | CCTTGGAGAACCAGCTCAACAGGCCGCTGTGGCTGCGGACGAGCAAGCACTTCTCCGTTGCGGAAACTCTaGTTGCCGGCTGCGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PWRTSSTGRCGCGRASTSPLRKL*LPAARS Trigger: GCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGG...AGAAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS-3UTR GCA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCATTCTTCTTCGGGGTCTaGAGAACCTCGCGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GADSSCLLEEMAGSLGEPFFFGV*RTSRLQ Trigger: CTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAA...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | CCTTGGAGAACCAGCTCAACAGGCCGCTGTGGCTGCGGACGAGCAAGCACTTCTTTCTTCTTCGGGGTCTaGAGAACCTCGCGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PWRTSSTGRCGCGRASTSFFFGV*RTSRLQ Trigger: CTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAA...AGAAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR TCA 90 bp | CTGTGTCAAGGACAGGGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCTCTTCCCATCCAGCTTaGGGGCTTCTGTGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCQGQGADSSCLLEEMAGSSHPA*GLLCSP Trigger: AGGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGA...GCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTTGACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | GCGGACGAGCAAGCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATCGGCGTACTGGCCGTTaGGGAAACTCTGGTTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ADEQALLACQHSGELQSYRRTGR*GNSGCR Trigger: CCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCG...ATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGCTTGCTCGTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAAGGGAGGCCCTGGCTTCTCTGGGAAGGTCAAGTTCAGGGTCCCTGTTCTTCCCATCCAGCTTaGGGGCTTCTGTGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QMQGRPWLLWEGQVQGPCSSHPA*GLLCSP Trigger: AGGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGA...ACAGGGACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | CCTTGGAGAACCAGCTCAACAGGCCGCTGTGGCTGCGGACGAGCAAGCACTTCTCTCCAGGGCTTCATATaGAGATGCTCTGCGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PWRTSSTGRCGCGRASTSLQGFI*RCSAQQ Trigger: TTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAG...AGAAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CCA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCACTTCCTTCAGAGCTTTaGCTCTCTCCACATCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GADSSCLLEEMAGSLGEPLPSEL*LSPHPQ Trigger: CTGGGGATGTGGAGAGAGCCAAAGCTCTGAAGGAAG...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR TCA 90 bp | CAGATGCAAGGGAGGCCCTGGCTTCTCTGGGAAGGTCAAGTTCAGGGTCCCTGTCTCTGGTTATTCTGTTaGTGCCTTCCAGGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: QMQGRPWLLWEGQVQGPCLWLFC*CLPGRM Trigger: CATCCGCCCTGGAAGGCATCAACAGAATAACCAGAG...ACAGGGACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCTCCCTTGCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR TCA 90 bp | CTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCAGAAGCAACCATCTCTTCTGGGCTaGAACAGGCACCACAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LGQGQLPRTVLTRARQKQPSLLG*NRHHRD Trigger: ATCCCTGTGGTGCCTGTTTCAGCCCAGAAGAGATGG...TTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | TGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCCTTATAGTCCTTGAGTaGCTTGTAGGCTTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: CRQQLSPRGDGRQPWRTSLIVLE*LVGLSP Trigger: CGGGCTCAAGCCTACAAGGCACTCAAGGACTATAAG...GCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCACTTATAGTCCTTGAGTaGCTTGTAGGCTTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GADSSCLLEEMAGSLGEPLIVLE*LVGLSP Trigger: CGGGCTCAAGCCTACAAGGCACTCAAGGACTATAAG...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CCA 90 bp | TTAAGTTCCTGCTCAGACTGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCGAAGCCTCGGCGTACTaGCCGTTGCGGAAACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSSCSDWRDTNLKEASLPEASAY*PLRKLW Trigger: CCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTC...GGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS-3UTR CCA 90 bp | GTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCTCTGTTGCTGTATGTaGCAGACTCCAGGCTACTAC | + |
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Preference number: 4 (lower is better) Translates to: VQTAAVSSRRWQAALENQLCCCM*QTPGYY Trigger: GTAGTAGCCTGGAGTCTGCCACATACAGCAACAGAG...CTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| 3UTR CAA 72 bp | GCATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTaGACAAGGGCCAGGCAGAAGCAAGCGAATGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AYLGQGQLPRTV*TRARQKQANEA Trigger: GGCCTCATTCGCTTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR TCA 90 bp | TGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCCGGAAGTGCAATCTTTaGTGCAATCTGTGCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CRQQLSPRGDGRQPWRTSRKCNL*CNLCSS Trigger: GGAACTGCACAGATTGCATCAAAGATTGCACTTCCG...GCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR TCA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGACTCTGGTTATTCTGTTaGTGCCTTCCAGGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: ALLACQHSGELQSYGGRGLWLFC*CLPGRM Trigger: CATCCGCCCTGGAAGGCATCAACAGAATAACCAGAG...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR GCA 90 bp | CTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCAGAAGCAACTCCAGGGCTTCATATaGAGATGCTCTGCGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGQGQLPRTVLTRARQKQLQGFI*RCSAQQ Trigger: TTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAG...TTGCTTCTGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGGGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGTGTGCAGTCCTTTACTaGCTCCTTGTACTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDRVQTAAVSSRRWQAALCAVLY*LLVLLQ Trigger: CTGAAGCAGTACAAGGAGGCAGTAAAGGACTGCACA...CAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCTCCAAGGGTTAGGCTCTGCCTTCCCACAAAGGGCCTGGACTAAAGGCTTCTGGTTAACTTCCTaGCGTAACTTCTGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLQGLGSAFPQRAWTKGFWLTS*RNFCAG Trigger: CCCTGCACAGAAGTTACGGCAGGAAGTTAACCAGAA...GCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | TGCATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCACTTCCTTCAGAGCTTTaGCTCTCTCCACATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CISGSGTVAKDCVDKGQALPSEL*LSPHPQ Trigger: CTGGGGATGTGGAGAGAGCCAAAGCTCTGAAGGAAG...TGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGACTCTGTTGCTGTATGTaGCAGACTCCAGGCTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLACQHSGELQSYGGRGLCCCM*QTPGYY Trigger: GTAGTAGCCTGGAGTCTGCCACATACAGCAACAGAG...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| 3UTR CAA 72 bp | GAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTaGATTTTGCACTCCCTTGGCGGCATGCTGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ERLLPLQGVKVG*ILHSLGGMLGI Trigger: AATGCCCAGCATGCCGCCAAGGGAGTGCAAAATCAACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCAAGGACAGGGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCCTCTTTGTGGTTATCTaGAGGCAAGGAATTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQGQGADSSCLLEEMAGLFVVI*RQGIPS Trigger: AGATGGAATTCCTTGCCTTCAGATAACCACAAAGAG...GCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTTGACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR TCA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCACTCTTTGTGGTTATCTaGAGGCAAGGAATTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GADSSCLLEEMAGSLGEPLFVVI*RQGIPS Trigger: AGATGGAATTCCTTGCCTTCAGATAACCACAAAGAG...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| 3UTR CAA 72 bp | GGCCTCTCTCCCCATTGCAGGAGGAATCTGGGCTCTTaGAACATCGTAGGTAGCTCAGACAGAAGGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSPHCRRNLGS*NIVGSSDRRQQ Trigger: TTGTTGCCTTCTGTCTGAGCTACCTACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR GCA 90 bp | TGCATATCTGGGTCAGGGACAGTTGCCAAGGACTGTGTTGACAAGGGCCAGGCATGTGCAGTCCTTTACTaGCTCCTTGTACTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CISGSGTVAKDCVDKGQACAVLY*LLVLLQ Trigger: CTGAAGCAGTACAAGGAGGCAGTAAAGGACTGCACA...TGCCTGGCCCTTGTCAACACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGGCTCTTTGAACATCGTATTCTGGTTAACTTCCTaGCGTAACTTCTGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGLSPHCRRNLGSLNIVFWLTS*RNFCAG Trigger: CCCTGCACAGAAGTTACGGCAGGAAGTTAACCAGAA...TACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATGTGCAGGGCCATTCCTaGGTTCAATTTGTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLWGKRLSSCSDWRDTNVQGHS*VQFVGG Trigger: GCCTCCTACAAATTGAACCCAGGAATGGCCCTGCAC...ATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGATTAGCTGTCTCTTTGTaGTTATCTGAAGGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLACQHSGELQSYGGRGLAVSL*LSEGKE Trigger: TTCCTTGCCTTCAGATAACCACAAAGAGACAGCTAA...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATGTGTCAGGTGAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTGTGCAGGGCCATTCCTaGGTTCAATTTGTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKMCQVKGCYLSKESKWGVQGHS*VQFVGG Trigger: GCCTCCTACAAATTGAACCCAGGAATGGCCCTGCAC...ACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATCGGAAGTGCAATCTTTaGTGCAATCTGTGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLWGKRLSSCSDWRDTNRKCNL*CNLCSS Trigger: GGAACTGCACAGATTGCATCAAAGATTGCACTTCCG...ATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATCTCAGCACGCTGCACGGTTaGAGTACAGAACACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLWGKRLSSCSDWRDTNLSTLHG*STEHFL Trigger: AAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCT...GAGATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATGAATTCCATCTCTTCTaGGCTGAAACAGGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLWGKRLSSCSDWRDTNEFHLF*AETGTT Trigger: TGTGGTGCCTGTTTCAGCCCAGAAGAGATGGAATTC...ATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATGTGTCAGGTGAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTAGCACGCTGCACGGTTaGAGTACAGAACACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKMCQVKGCYLSKESKWGSTLHG*STEHFL Trigger: AAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCT...ACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATGTGTCAGGTGAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTTTAGCTGTCTCTTTGTaGTTATCTGAAGGCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKMCQVKGCYLSKESKWGLAVSL*LSEGKE Trigger: TTCCTTGCCTTCAGATAACCACAAAGAGACAGCTAA...ACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS GCA 90 bp | GCAGCGCGCGCTCGTACAGCGCCGAAGCCTCGGCGTACTGGCCGTTaGGGAAACTCTGGTTGCCGGCTGCGCGGAGCTCTTCCACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AARARTAPKPRRTGR*GNSGCRLRGALPQS Trigger: ACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGAGCGCGCGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
||
| CDS GCA 90 bp | TTCTTCTTCGGGGTCTGCAGAACCTCGCGCCTGCAGCAGCCGCAGTaGGCGCTCGTACAGCGCCGAGGCTTCGCCGTACTGGCCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FFFGVCRTSRLQQPQ*ALVQRRGFAVLAIA Trigger: CGCAATGGCCAGTACGGCGAAGCCTCGGCGCTGTACGAGCGCGCACTGCGGCTGCTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109384.10 |
||
| CDS GCA 90 bp | ACAGCGCCGAAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTGGTTaGCGGCTGCGCGGAGCTCTTCCACAGAGTCTGAGAGTTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAPKPRRTGRCGNSG*RLRGALPQSLRVWG Trigger: CCCCCAAACTCTCAGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
||
| CDS GCA 90 bp | GAGTACAGAACACTTTCTTCTTCGGGGTCTGCAGAACCTCGCGCCTaGAGCAGCCGCAGTGCGCGCTCGTACAGCGCCGAGGCTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EYRTLSSSGSAEPRA*SSRSARSYSAEASP Trigger: CGGCGAAGCCTCGGCGCTGTACGAGCGCGCACTGCGGCTGCTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAAAGTGTTCTGTACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109384.10 |
||
| CDS CCA 90 bp | TCGTACAGCGCCGAAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTaGTTGCCGGCTGCGCGGAGCTCTTCCACAGAGTCTGAGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYSAEASAYWPLRKL*LPAARSSSTESESL Trigger: CAAACTCTCAGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTGGCTTCTCTGGGAAGGTCAAGTTCAGGGTCCCTGTTGCCCTCTACGGTCGGCGTACTGGCCGTaGCGGAAACTCTGGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPWLLWEGQVQGPCCPLRSAYWP*RKLWLP Trigger: CGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGA...CCGTAGAGGGCAACAGGGACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
||
| CDS-3UTR CAA 90 bp | TGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCCTGCGCAGCAAGGGCTaGATGCTGAAGGGAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRQQLSPRGDGRQPWRTSLRSKG*MLKGTK Trigger: CTTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAG...GCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGTTGCGGAAACTCTGGTaGCCGGCTGCGCGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRDTNLKEASLPIAGGIWLRKLW*PAARSS Trigger: AGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAA...CCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTGGCTTCTCTGGGAAGGTCAAGTTCAGGGTCCCTGTTGCCCTCTACGGTTCTTCCCATCCAGCTaGAGGGCTTCTGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPWLLWEGQVQGPCCPLRFFPSS*RASVQS Trigger: GGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAA...CCGTAGAGGGCAACAGGGACCCTGAACTTGACCTTCCCAGAGAAGCCAGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS GCA 90 bp | GTCAACGTAGGCCAGGGCGTACTTCTCCAGGGCTTCATATGCAGATaGTCTGCGCAGCAAGGGCTTGATGCTGAAGGGAACCAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VNVGQGVLLQGFICR*SAQQGLDAEGNQGQ Trigger: CTGGCCTTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTACGCCCTGGCCTACGTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | TGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCTCCTTTACTGCCTCCTaGTACTGCTTCAGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRQQLSPRGDGRQPWRTSSFTAS*YCFRTR Trigger: CCTGGTCCTGAAGCAGTACAAGGAGGCAGTAAAGGA...GCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGATTCTTCCCATCCAGCTaGAGGGCTTCTGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLACQHSGELQSYGGRGFFPSS*RASVQS Trigger: GGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAA...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGAGAGTGCCTTGTAGGCTaGAGCCCGTCTGTAAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLACQHSGELQSYGGRGECLVG*SPSVKR Trigger: GCGTTTTACAGACGGGCTCAAGCCTACAAGGCACTC...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | TGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGCGCGGAAGTGCAATCTTaGATGCAATCTGTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRQQLSPRGDGRQPWRTSAEVQS*MQSVQF Trigger: GAACTGCACAGATTGCATCAAAGATTGCACTTCCGC...GCTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGGCGGCAGAGGATCCTTTACTGCCTCCTaGTACTGCTTCAGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLACQHSGELQSYGGRGSFTAS*YCFRTR Trigger: CCTGGTCCTGAAGCAGTACAAGGAGGCAGTAAAGGA...TCCTCTGCCGCCATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS CCA 90 bp | GCTGTCTCTTTGTGGTTATCTGAAGGCAAGGAATTCCATCTCTTCTaGGCTGAAACAGGCACCACAGGGATAGGGGGCAGCTTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSLWLSEGKEFHLF*AETGTTGIGGSFRR Trigger: GCGCCTGAAGCTGCCCCCTATCCCTGTGGTGCCTGTTTCAGCCCAGAAGAGATGGAATTCCTTGCCTTCAGATAACCACAAAGAGACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GCGGACGAGCAAGCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGCTCTGGTTATTCTGTaGATGCCTTCCAGGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADEQALLACQHSGELQSYALVIL*MPSRAD Trigger: ATCCGCCCTGGAAGGCATCAACAGAATAACCAGAGC...ATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGCTTGCTCGTCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS GCA 90 bp | CTTATAGTCAACGTAGGCCAGGGCGTACTTCTCCAGGGCTTCATATaGAGATGCTCTGCGCAGCAAGGGCTTGATGCTGAAGGGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LIVNVGQGVLLQGFI*RCSAQQGLDAEGNQ Trigger: TTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTACGCCCTGGCCTACGTTGACTATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS CCA 90 bp | TGCAATCTGTGCAGTTCCCATCCTTCAAGTAGCACGCTGCACGGTTaGAGTACAGAACACTTTCTTCTTCGGGGTCTGCAGAACCTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CNLCSSHPSSSTLHG*STEHFLLRGLQNLA Trigger: CGCGAGGTTCTGCAGACCCCGAAGAAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCTACTTGAAGGATGGGAACTGCACAGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | TTAAGTTCCTGCTCAGACTGGAGGGACACTAATCTCAAGGAGGCCTCTCTCCCCGCTCTGGTTATTCTGTaGATGCCTTCCAGGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSCSDWRDTNLKEASLPALVIL*MPSRAD Trigger: ATCCGCCCTGGAAGGCATCAACAGAATAACCAGAGC...GGGGAGAGAGGCCTCCTTGAGATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGTGGCTTCTTTGGATTaGGTTTTAGCTGTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GADSSCLLEEMAGSLGEPVASLD*VLAVSL Trigger: CAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCAC...TGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GTGCAGACAGCAGCTGTCTCCTCGAGGAGATGGCAGGCAGCCTTGGAGAACCAGTTCTTTACAAGGTCATaGCCTTCTTCCTTCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQTAAVSSRRWQAALENQFFTRS*PSSFRA Trigger: AGCTCTGAAGGAAGAAGGCAATGACCTTGTAAAGAA...CTGGTTCTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS GCA 90 bp | TACATTCTTCCCATCCAGCTTGAGGGCTTCTGTGCAGTCCTTTACTaGCTCCTTGTACTGCTTCAGGACCAGGTGACAGAGCGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YILPIQLEGFCAVLY*LLVLLQDQVTERSV Trigger: AACAGAGCGCTCTGTCACCTGGTCCTGAAGCAGTACAAGGAGGCAGTAAAGGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | GCGGACGAGCAAGCACTTCTAGCCTGTCAGCACTCAGGTGAACTGCAGAGCTATGCGGAAGTGCAATCTTaGATGCAATCTGTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADEQALLACQHSGELQSYAEVQS*MQSVQF Trigger: GAACTGCACAGATTGCATCAAAGATTGCACTTCCGC...ATAGCTCTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGCTTGCTCGTCCGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
||
| CDS-3UTR CAA 90 bp | AGTAAAATGTGTCAGGTGAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTGAGTGCCTTGTAGGCTaGAGCCCGTCTGTAAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SKMCQVKGCYLSKESKWGECLVG*SPSVKR Trigger: GCGTTTTACAGACGGGCTCAAGCCTACAAGGCACTC...ACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS TCA 90 bp | CTTGAGCCCGTCTGTAAAACGCCTTTACATTCTTCCCATCCAGCTTaGGGGCTTCTGTGCAGTCCTTTACTGCCTCCTTGTACTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LEPVCKTPLHSSHPA*GLLCSPLLPPCTAS Trigger: TGAAGCAGTACAAGGAGGCAGTAAAGGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAATGTAAAGGCGTTTTACAGACGGGCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 90 bp | ATCTTTGATGCAATCTGTGCAGTTCCCATCCTTCAAGTAGCACGCTaGACGGTTGGAGTACAGAACACTTTCTTCTTCGGGGTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IFDAICAVPILQVAR*TVGVQNTFFFGVCR Trigger: TCTGCAGACCCCGAAGAAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCTACTTGAAGGATGGGAACTGCACAGATTGCATCAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 90 bp | GTCCATGAGAGCTCTGGTTATTCTGTTGATGCCTTCCAGGGCGGATaGCACACTGTTATCGATCTGCAGCACAGTCTTATAGTCAACGTA | + |
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Preference number: 5 (lower is better) Translates to: VHESSGYSVDAFQGG*HTVIDLQHSLIVNV Trigger: TACGTTGACTATAAGACTGTGCTGCAGATCGATAACAGTGTGGCATCCGCCCTGGAAGGCATCAACAGAATAACCAGAGCTCTCATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CAA 90 bp | CAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGGCTCTTTGAACATCGTAGTGGCTTCTTTGGATTaGGTTTTAGCTGTCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QGGLSPHCRRNLGSLNIVVASLD*VLAVSL Trigger: CAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCAC...TACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CAA 90 bp | CAAGGAGGCCTCTCTCCCCATTGCAGGAGGAATCTGGGCTCTTTGAACATCGTATTCTTTACAAGGTCATaGCCTTCTTCCTTCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QGGLSPHCRRNLGSLNIVFFTRS*PSSFRA Trigger: AGCTCTGAAGGAAGAAGGCAATGACCTTGTAAAGAA...TACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTATGGGGGAAAAGGTTAAGTTCCTGCTCAGACTGGAGGGACACTAATGTTTTAGCTGTCTCTTaGTGGTTATCTGAAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLWGKRLSSCSDWRDTNVLAVS*WLSEGK Trigger: CTTGCCTTCAGATAACCACAAAGAGACAGCTAAAAC...ATTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS-3UTR CAA 90 bp | AGTAAAATGTGTCAGGTGAAAGGCTGCTACCTCTCCAAGGAGTCAAAGTGGGGTGTTTTAGCTGTCTCTTaGTGGTTATCTGAAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SKMCQVKGCYLSKESKWGVLAVS*WLSEGK Trigger: CTTGCCTTCAGATAACCACAAAGAGACAGCTAAAAC...ACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CCA 90 bp | CTACTACACAAGAGGCTCTCACTGTACTTCTCAATAGCTTTCTTATaGTTGCCCTTCTTTACAAGGTCATTGCCTTCTTCCTTCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LLHKRLSLYFSIAFL*LPFFTRSLPSSFRA Trigger: AGCTCTGAAGGAAGAAGGCAATGACCTTGTAAAGAAGGGCAACCATAAGAAAGCTATTGAGAAGTACAGTGAGAGCCTCTTGTGTAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 72 bp | GGGGTCTGCAGAACCTCGCGCCTGCAGCAGCCGCAGTaGGCGCTCGTACAGCGCCGAGGCTTCGCCGTACTG | + |
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Preference number: 6 (lower is better) Translates to: GVCRTSRLQQPQ*ALVQRRGFAVL Trigger: CAGTACGGCGAAGCCTCGGCGCTGTACGAGCGCGCACTGCGGCTGCTGCAGGCGCGAGGTTCTGCAGACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109384.10 |
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| CDS CCA 72 bp | AGCGCGCGCTCGTACAGCGCCGAAGCCTCGGCGTACTaGCCGTTGCGGAAACTCTGGTTGCCGGCTGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SARSYSAEASAY*PLRKLWLPAAR Trigger: CCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGAGCGCGCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS CAA 90 bp | CGCAGCGCGCGCTCGTACAGCGCCGAAGCCTCGGCGTACTGGCCGTaGCGGAAACTCTGGTTGCCGGCTGCGCGGAGCTCTTCCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSARSYSAEASAYWP*RKLWLPAARSSSTE Trigger: CTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGAGCGCGCGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS CAA 72 bp | CGCTCGTACAGCGCCGAAGCCTCGGCGTACTGGCCGTaGCGGAAACTCTGGTTGCCGGCTGCGCGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSYSAEASAYWP*RKLWLPAARSS Trigger: AGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS GCA 72 bp | GCTCGTACAGCGCCGAAGCCTCGGCGTACTGGCCGTTaGGGAAACTCTGGTTGCCGGCTGCGCGGAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ARTAPKPRRTGR*GNSGCRLRGAL Trigger: AAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTACGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS GCA 72 bp | ACACTTTCTTCTTCGGGGTCTGCAGAACCTCGCGCCTaGAGCAGCCGCAGTGCGCGCTCGTACAGCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: TLSSSGSAEPRA*SSRSARSYSAE Trigger: CTCGGCGCTGTACGAGCGCGCACTGCGGCTGCTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAAAGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109384.10 |
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| CDS CCA 72 bp | GCCGAAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTaGTTGCCGGCTGCGCGGAGCTCTTCCACAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AEASAYWPLRKL*LPAARSSSTES Trigger: AGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS CAA 72 bp | GAAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTGGTaGCCGGCTGCGCGGAGCTCTTCCACAGAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EASAYWPLRKLW*PAARSSSTESE Trigger: CTCAGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS CAA 90 bp | TACAGCGCCGAAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTGGTaGCCGGCTGCGCGGAGCTCTTCCACAGAGTCTGAGAGTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YSAEASAYWPLRKLW*PAARSSSTESESLG Trigger: CCCCAAACTCTCAGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTTCGGCGCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS GCA 72 bp | AAGCCTCGGCGTACTGGCCGTTGCGGAAACTCTGGTTaGCGGCTGCGCGGAGCTCTTCCACAGAGTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KPRRTGRCGNSG*RLRGALPQSLR Trigger: TCTCAGACTCTGTGGAAGAGCTCCGCGCAGCCGGCAACCAGAGTTTCCGCAACGGCCAGTACGCCGAGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018466.4 |
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| CDS GCA 72 bp | GGCCAGGGCGTACTTCTCCAGGGCTTCATATGCAGATaGTCTGCGCAGCAAGGGCTTGATGCTGAAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GQGVLLQGFICR*SAQQGLDAEGN Trigger: GTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTACGCCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 72 bp | AGGGCTTCATATGCAGATGCTCTGCGCAGCAAGGGCTaGATGCTGAAGGGAACCAAGGCCAGCGCGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RASYADALRSKG*MLKGTKASAEV Trigger: CACTTCCGCGCTGGCCTTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 72 bp | AACGTAGGCCAGGGCGTACTTCTCCAGGGCTTCATATaGAGATGCTCTGCGCAGCAAGGGCTTGATGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: NVGQGVLLQGFI*RCSAQQGLDAE Trigger: TTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTACGCCCTGGCCTACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 72 bp | CCCATCCAGCTTGAGGGCTTCTGTGCAGTCCTTTACTaGCTCCTTGTACTGCTTCAGGACCAGGTGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: PIQLEGFCAVLY*LLVLLQDQVTE Trigger: CTCTGTCACCTGGTCCTGAAGCAGTACAAGGAGGCAGTAAAGGACTGCACAGAAGCCCTCAAGCTGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CCA 72 bp | TCAGGACCAGGTGACAGAGCGCTCTGTTGCTGTATGTaGCAGACTCCAGGCTACTACACAAGAGGCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGPGDRALCCCM*QTPGYYTRGSH Trigger: GTGAGAGCCTCTTGTGTAGTAGCCTGGAGTCTGCCACATACAGCAACAGAGCGCTCTGTCACCTGGTCCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 90 bp | TACTTCTCCAGGGCTTCATATGCAGATGCTCTGCGCAGCAAGGGCTaGATGCTGAAGGGAACCAAGGCCAGCGCGGAAGTGCAATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: YFSRASYADALRSKG*MLKGTKASAEVQSL Trigger: CAAAGATTGCACTTCCGCGCTGGCCTTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CCA 72 bp | TGCAGTTCCCATCCTTCAAGTAGCACGCTGCACGGTTaGAGTACAGAACACTTTCTTCTTCGGGGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CSSHPSSSTLHG*STEHFLLRGLQ Trigger: CTGCAGACCCCGAAGAAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCTACTTGAAGGATGGGAACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CCA 72 bp | TTGTGGTTATCTGAAGGCAAGGAATTCCATCTCTTCTaGGCTGAAACAGGCACCACAGGGATAGGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LWLSEGKEFHLF*AETGTTGIGGS Trigger: GCTGCCCCCTATCCCTGTGGTGCCTGTTTCAGCCCAGAAGAGATGGAATTCCTTGCCTTCAGATAACCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 72 bp | GCAATCTGTGCAGTTCCCATCCTTCAAGTAGCACGCTaGACGGTTGGAGTACAGAACACTTTCTTCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: AICAVPILQVAR*TVGVQNTFFFG Trigger: CCCGAAGAAGAAAGTGTTCTGTACTCCAACCGTGCAGCGTGCTACTTGAAGGATGGGAACTGCACAGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS TCA 72 bp | GTCTGTAAAACGCCTTTACATTCTTCCCATCCAGCTTaGGGGCTTCTGTGCAGTCCTTTACTGCCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VCKTPLHSSHPA*GLLCSPLLPPC Trigger: ACAAGGAGGCAGTAAAGGACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAATGTAAAGGCGTTTTACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS GCA 72 bp | AGCTCTGGTTATTCTGTTGATGCCTTCCAGGGCGGATaGCACACTGTTATCGATCTGCAGCACAGTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: SSGYSVDAFQGG*HTVIDLQHSLI Trigger: TATAAGACTGTGCTGCAGATCGATAACAGTGTGGCATCCGCCCTGGAAGGCATCAACAGAATAACCAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 90 bp | ACATCCCCAGCAGAAGGCACTCTGCTCTTCGTAGCTGTGGCTTCTTaGGATTTGGTTTTAGCTGTCTCTTTGTGGTTATCTGAAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSPAEGTLLFVAVAS*DLVLAVSLWLSEGK Trigger: CTTGCCTTCAGATAACCACAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCACAGCTACGAAGAGCAGAGTGCCTTCTGCTGGGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 72 bp | GCAGAAGGCACTCTGCTCTTCGTAGCTGTGGCTTCTTaGGATTTGGTTTTAGCTGTCTCTTTGTGGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: AEGTLLFVAVAS*DLVLAVSLWLS Trigger: AGATAACCACAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCACAGCTACGAAGAGCAGAGTGCCTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 90 bp | CTCTTCGTAGCTGTGGCTTCTTTGGATTTGGTTTTAGCTGTCTCTTaGTGGTTATCTGAAGGCAAGGAATTCCATCTCTTCTGGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LFVAVASLDLVLAVS*WLSEGKEFHLFWAE Trigger: TTCAGCCCAGAAGAGATGGAATTCCTTGCCTTCAGATAACCACAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCACAGCTACGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 90 bp | CTACACAAGAGGCTCTCACTGTACTTCTCAATAGCTTTCTTATGGTaGCCCTTCTTTACAAGGTCATTGCCTTCTTCCTTCAGAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LHKRLSLYFSIAFLW*PFFTRSLPSSFRAL Trigger: CAAAGCTCTGAAGGAAGAAGGCAATGACCTTGTAAAGAAGGGCAACCATAAGAAAGCTATTGAGAAGTACAGTGAGAGCCTCTTGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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| CDS CAA 72 bp | GCTGTGGCTTCTTTGGATTTGGTTTTAGCTGTCTCTTaGTGGTTATCTGAAGGCAAGGAATTCCATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AVASLDLVLAVS*WLSEGKEFHLF Trigger: GAAGAGATGGAATTCCTTGCCTTCAGATAACCACAAAGAGACAGCTAAAACCAAATCCAAAGAAGCCACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018466.4 ENSMUST00000109384.10 |
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