Pregenerated sensors for TOMM20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093904Ensembl transcript IDs: ENSMUST00000179857.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCTCAACAGTTAGTAGTGGTGTATACCTTTAAACCCAGGGTTTaGGGGGCGGACAGAGGCAGGAGGCAACTTTCAGGCCAGCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: EPQQLVVVYTFKPRV*GADRGRRQLSGQPG Trigger: ACCAGGCTGGCCTGAAAGTTGCCTCCTGCCTCTGTCCGCCCCCCAAACCCTGGGTTTAAAGGTATACACCACTACTAACTGTTGAGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 90 bp | CACCCTCCAGGTCAGGGTGCACACAGGTCTAATCCCTGTGCTGTTTaGATCCCGGTGTTTGAAAGATTAGGAGTTAAGTGCCCAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: HPPGQGAHRSNPCAV*IPVFERLGVKCPEH Trigger: GTGCTCTGGGCACTTAACTCCTAATCTTTCAAACACCGGGATGCAAACAGCACAGGGATTAGACCTGTGTGCACCCTGACCTGGAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 90 bp | CTGGACAGAGATGCAGGAACACAGCACCTGGACTTGGCCTCAGTGTaGACTACTGGGGCTGTTTACATCTTTCCAGGCAGCTGGCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LDRDAGTQHLDLASV*TTGAVYIFPGSWLK Trigger: TTTTAGCCAGCTGCCTGGAAAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTCCTGCATCTCTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 90 bp | AAACTTGGCTTAATCAGCCTCAAAGTAAAACAGCATCTCCACCTCTaGAACTTCCAGGGCCAGGGCATCCAGTGCACACTGCAGAGTACC | + |
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Preference number: 1 (lower is better) Translates to: KLGLISLKVKQHLHL*NFQGQGIQCTLQST Trigger: GGTACTCTGCAGTGTGCACTGGATGCCCTGGCCCTGGAAGTTGCAGAGGTGGAGATGCTGTTTTACTTTGAGGCTGATTAAGCCAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 90 bp | CCTAATTCAAATCCTGAACCTTCCAGTCTCCACGGGGTCCAAAGATaGCTTAGAACTGTGTGCCCAAGACTGGCCTCAAACTCACAACCC | + |
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Preference number: 1 (lower is better) Translates to: PNSNPEPSSLHGVQR*LRTVCPRLASNSQP Trigger: GGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGACCCCGTGGAGACTGGAAGGTTCAGGATTTGAATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 90 bp | AGATGCAGGAACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTaGGGCTGTTTACATCTTTCCAGGCAGCTGGCTAAAATGTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RCRNTAPGLGLSVHY*GCLHLSRQLAKMFS Trigger: TGAAAACATTTTAGCCAGCTGCCTGGAAAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTCCTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 90 bp | GTGACAGTGCCAAAGCCCCACATCTGTCCTTCGTGCAAACAAACTTaGCTTAATCAGCCTCAAAGTAAAACAGCATCTCCACCTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: VTVPKPHICPSCKQT*LNQPQSKTASPPLQ Trigger: TTGCAGAGGTGGAGATGCTGTTTTACTTTGAGGCTGATTAAGCCAAGTTTGTTTGCACGAAGGACAGATGTGGGGCTTTGGCACTGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 90 bp | ACAAGGTCTGGTTATTCTGAAATAATCACCAGCTGGAGGTGGACCTaGAGACACTCAACAGAACCAACTGACCTAATGCTGAGATGGAAC | + |
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Preference number: 1 (lower is better) Translates to: TRSGYSEIITSWRWT*RHSTEPTDLMLRWN Trigger: GTTCCATCTCAGCATTAGGTCAGTTGGTTCTGTTGAGTGTCTTCAGGTCCACCTCCAGCTGGTGATTATTTCAGAATAACCAGACCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 90 bp | CTGCTTTTATCTCAGTTGGGTGTTAATCTTGCCTTCTGGCCTTGCTaGCCAGCACCAACGCTTTCTGCTTCCATCTATTTAACTTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLLSQLGVNLAFWPC*PAPTLSASIYLTSG Trigger: ACCTGAAGTTAAATAGATGGAAGCAGAAAGCGTTGGTGCTGGTCAGCAAGGCCAGAAGGCAAGATTAACACCCAACTGAGATAAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 90 bp | GATCCTGTAAGCTGCAGAGCGCCATCAGCATTATTTAGAGCTGGCTaGTATTTCAACTTCATAGTTGATGCAGAGAACACTGCTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: DPVSCRAPSALFRAG*YFNFIVDAENTALH Trigger: ATGTAAAGCAGTGTTCTCTGCATCAACTATGAAGTTGAAATATCAGCCAGCTCTAAATAATGCTGATGGCGCTCTGCAGCTTACAGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 90 bp | ATAGTTGATGCAGAGAACACTGCTTTACATAAACACAGTATAACATaGAAGCAGTGTTTAGGGTCATTTCAGAAAGTGCTGGAAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: IVDAENTALHKHSIT*KQCLGSFQKVLETL Trigger: CAGAGTTTCCAGCACTTTCTGAAATGACCCTAAACACTGCTTCCATGTTATACTGTGTTTATGTAAAGCAGTGTTCTCTGCATCAACTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCAGGAACACAGCACCTaGACTTGGCCTCAGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VWSCEGWKTKAAGSLSSGQEHST*TWPQCA Trigger: TGCACACTGAGGCCAAGTCCAGGTGCTGTGTTCCTG...CCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGGCACCCAAGGCAGCATaGCAACATGCCCTAACATGT | + |
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Preference number: 2 (lower is better) Translates to: VWSCEGWKTKAAGSLSSGAPKAA*QHALTC Trigger: ACATGTTAGGGCATGTTGGCATGCTGCCTTGGGTGC...CCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGAGGTGCATGGTGGTATaGACACCTAACCTGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: VWSCEGWKTKAAGSLSSGRCMVV*TPNLLD Trigger: GTCCAGCAGGTTAGGTGTGCATACCACCATGCACCT...CCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCCATATTCTCTCACCTCCTaGGATCAAGGAAGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: WSCEGWKTKAAGSLSSGPYSLTS*DQGRRA Trigger: GGCCCTTCTTCCTTGATCCCAGGAGGTGAGAGAATA...TGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCCAAGATTAGGAGTTAAGTaGCCAGAGCACAGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WSCEGWKTKAAGSLSSGPRLGVK*PEHRKP Trigger: TGGCTTCCTGTGCTCTGGGCACTTAACTCCTAATCT...TGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | AACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTTTACCTCTGTAAGCAGTaGCCTGTGGTCTTCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: NTAPGLGLSVHYWGCLHLYLCKQ*PVVFST Trigger: CGTGGAGAAGACCACAGGGCACTGCTTACAGAGGTA...AAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGATGGCTTAGAACTGTGTGCCCAAGACTGGCCTCAAACTCACAACCCAAGCTGGAGGTGGACCTaGAGACACTCAACAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: SKDGLELCAQDWPQTHNPSWRWT*RHSTEP Trigger: TGGTTCTGTTGAGTGTCTTCAGGTCCACCTCCAGCT...TGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 90 bp | TTAGAACTGTGTGCCCAAGACTGGCCTCAAACTCACAACCCAGCCTaGACGTCTTCCTTATCAGTGATAAGCAGAGTCAGAAGGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LELCAQDWPQTHNPA*TSSLSVISRVRREL Trigger: CAGCTCCCTTCTGACTCTGCTTATCACTGATAAGGAAGACGTCAAGGCTGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCCATCAGGTGAGCTGGGGTaGAACATTTGTTTCTATGAA | + |
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Preference number: 2 (lower is better) Translates to: WSCEGWKTKAAGSLSSGPSGELG*NICFYE Trigger: TTCATAGAAACAAATGTTGCACCCCAGCTCACCTGA...TGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTGGTGGCCACTTCACCCACGGCAGCATGCCAACATaGCCTAACATGTATTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSHCHQVSPFPIGGHFTHGSMPT*PNMYSL Trigger: GAGGGAATACATGTTAGGGCATGTTGGCATGCTGCC...GTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | GAACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTAAGGTCTGGTTATTCTaGAATAATCACCAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: EHSTWTWPQCALLGLFTSKVWLF*NNHQLE Trigger: CTCCAGCTGGTGATTATTTCAGAATAACCAGACCTT...AGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCGACTTGGCCTCAGTGTaGACTACTGGGGCTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: FRNEMWTASTAQDVLFLVDLASV*TTGAVY Trigger: GTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTC...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGATGGCTTAGAACTGTGTGCCCAAGACTGGCCTCAAACTCACAACCCATATGCACACCTAACCTaGTGGACAGAGATGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SKDGLELCAQDWPQTHNPYAHLT*WTEMQE Trigger: TTCCTGCATCTCTGTCCAGCAGGTTAGGTGTGCATA...TGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCAGCCCTGTAGGGAACAGCATTCAGTTCTaGAAATACACACCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: MWTASTAQDVLFLVSPVGNSIQF*KYTPSQ Trigger: CTGGCTTGGTGTGTATTTGCAGAACTGAATGCTGTT...CCCTACAGGGCTGACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGTGTCACCGTGGTAAATaGAGAAACCTAAGACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: VWSCEGWKTKAAGSLSSGCHRGK*RNLRLL Trigger: TAGCAGTCTTAGGTTTCTGCATTTACCACGGTGACA...CCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAGATGGCTTAGAACTGTGTGCCCAAGACTGGCCTCAAACTCACAACCCAAAGAATGGATTTGTCTaGCACCAGCCACACCACTTC | + |
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Preference number: 2 (lower is better) Translates to: SKDGLELCAQDWPQTHNPKNGFV*HQPHHF Trigger: GAAGTGGTGTGGCTGGTGCCAGACAAATCCATTCTT...TGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCCAACAAACGGAAATCCATaGTATTTGGTTAACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: WSCEGWKTKAAGSLSSGPTNGNP*YLVNSV Trigger: CACTGAGTTAACCAAATATCATGGATTTCCGTTTGT...TGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTGGTGGCCACTTCACCCACCTCAACAGAACCAACTaGCCTAATGCTGAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSHCHQVSPFPIGGHFTHLNRTN*PNAEME Trigger: TTCCATCTCAGCATTAGGTCAGTTGGTTCTGTTGAG...GTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | GAACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTCACATCAGTAGCAACTaGCAAAGAAATTACTCCACT | + |
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Preference number: 2 (lower is better) Translates to: EHSTWTWPQCALLGLFTSHISSN*QRNYST Trigger: AGTGGAGTAATTTCTTTGTCAGTTGCTACTGATGTG...AGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | GAACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTAGCACCAACGCTTTCTaGTTCCATCTATTTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: EHSTWTWPQCALLGLFTSSTNAF*FHLFNF Trigger: GAAGTTAAATAGATGGAAGCAGAAAGCGTTGGTGCT...AGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCACACTGCAGAGTACCTCTGTAAGCAGTGCCCTGTGGTCTTCTCCACGTCCAGCAAAATGCAACTaGCATATTTGTAGCATCATT | + |
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Preference number: 2 (lower is better) Translates to: QCTLQSTSVSSALWSSPRPAKCN*HICSII Trigger: AATGATGCTACAAATATGCCAGTTGCATTTTGCTGG...ACGTGGAGAAGACCACAGGGCACTGCTTACAGAGGTACTCTGCAGTGTGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCTTTCAGTTAAGACAGTaGCACCCAAGGCAGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: FRNEMWTASTAQDVLFLVFQLRQ*HPRQHA Trigger: GGCATGCTGCCTTGGGTGCCACTGTCTTAACTGAAA...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGGAACACTTCATTTTCTaGCGTGAGAAGAATGGATTT | + |
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Preference number: 2 (lower is better) Translates to: VWSCEGWKTKAAGSLSSGEHFIF*REKNGF Trigger: AAATCCATTCTTCTCACGTCAGAAAATGAAGTGTTC...CCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR GCA 90 bp | GAACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTATTCTACCAGCAAAATaGAACTGGCATATTTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: EHSTWTWPQCALLGLFTSILPAK*NWHICS Trigger: GCTACAAATATGCCAGTTGCATTTTGCTGGTAGAAT...AGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCGTGTGGGACAGTTCATaGCAGCATAATTTGCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FRNEMWTASTAQDVLFLVVWDSS*QHNLPL Trigger: TAAGGGCAAATTATGCTGTCATGAACTGTCCCACAC...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTGGTGGCCACTTCACCCACCTTCATTTTCTGACGTaGGAAGAATGGATTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSHCHQVSPFPIGGHFTHLHFLT*EEWICL Trigger: CAGACAAATCCATTCTTCTCACGTCAGAAAATGAAG...GTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCCATAGGACTCTACAGTaGTGTCAATCTCAGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: FRNEMWTASTAQDVLFLVHRTLQ*CQSQTS Trigger: ACTTGTCTGAGATTGACATCACTGTAGAGTCCTATG...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 90 bp | TGGAAACTGCTTAGTGTAACTGTGGATTGTAACAAATTTAAAATCTaGAACATTTCAAAAGTGCTGAGTCACTGTCATCAAGTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: WKLLSVTVDCNKFKI*NISKVLSHCHQVSP Trigger: GGGAGAAACTTGATGACAGTGACTCAGCACTTTTGAAATGTTCAAGATTTTAAATTTGTTACAATCCACAGTTACACTAAGCAGTTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | GCTGAGATGGAACACCCCAGAGACGGGCAGGCAGACTaGGCCTCAGTCTGTATAAAGAGCCAAGCGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: AEMEHPRDGQAD*ASVCIKSQASR Trigger: TCTGCTCGCTTGGCTCTTTATACAGACTGAGGCTCAGTCTGCCTGCCCGTCTCTGGGGTGTTCCATCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | GATGCAGGAACACAGCACCTGGACTTGGCCTCAGTGTaGACTACTGGGGCTGTTTACATCTTTCCAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: DAGTQHLDLASV*TTGAVYIFPGS Trigger: GCTGCCTGGAAAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTCCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | TGCACACTGCAGAGTACCTCTGTAAGCAGTGCCCTGTaGTCTTCTCCACGTCTGGGCTGCATAGGACTCTAC | + |
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Preference number: 3 (lower is better) Translates to: CTLQSTSVSSAL*SSPRLGCIGLY Trigger: GTAGAGTCCTATGCAGCCCAGACGTGGAGAAGACCACAGGGCACTGCTTACAGAGGTACTCTGCAGTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | GTCACAGGTGCATGGTGGTATGCACACCTAACCTGCTaGACAGAGATGCAGGAACACAGCACCTGGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: VTGAWWYAHLTC*TEMQEHSTWTW Trigger: CCAAGTCCAGGTGCTGTGTTCCTGCATCTCTGTCCAGCAGGTTAGGTGTGCATACCACCATGCACCTGTGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | TGCAGGCTGGTTCAAGGTCACAGGTGCATGGTGGTATaGACACCTAACCTGCTGGACAGAGATGCAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: CRLVQGHRCMVV*TPNLLDRDAGT Trigger: TGTTCCTGCATCTCTGTCCAGCAGGTTAGGTGTGCATACCACCATGCACCTGTGACCTTGAACCAGCCTGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | AGACACTCAACAGAACCAACTGACCTAATGCTGAGATaGAACACCCCAGAGACGGGCAGGCAGACTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: RHSTEPTDLMLR*NTPETGRQTEP Trigger: AGGCTCAGTCTGCCTGCCCGTCTCTGGGGTGTTCCATCTCAGCATTAGGTCAGTTGGTTCTGTTGAGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | CAGCCACACCACTTCCATGACAGTACATCAGCACTCTaGTTTGCAGGCTGGTTCAAGGTCACAGGTGCATGG | + |
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Preference number: 3 (lower is better) Translates to: QPHHFHDSTSAL*FAGWFKVTGAW Trigger: CCATGCACCTGTGACCTTGAACCAGCCTGCAAACCAGAGTGCTGATGTACTGTCATGGAAGTGGTGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | CAGTTAGTAGTGGTGTATACCTTTAAACCCAGGGTTTaGGGGGCGGACAGAGGCAGGAGGCAACTTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: QLVVVYTFKPRV*GADRGRRQLSG Trigger: GCCTGAAAGTTGCCTCCTGCCTCTGTCCGCCCCCCAAACCCTGGGTTTAAAGGTATACACCACTACTAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | GGGTCCAAAGATGGCTTAGAACTGTGTGCCCAAGACTaGCCTCAAACTCACAACCCAGCCTTGACGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GSKDGLELCAQD*PQTHNPALTSS Trigger: GGAAGACGTCAAGGCTGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | CCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTaGGTTCTGGGCCAGCTAAAGCTACATAGTGAGACC | + |
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Preference number: 3 (lower is better) Translates to: PVRAGKRRQLDL*VLGQLKLHSET Trigger: GGTCTCACTATGTAGCTTTAGCTGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | AACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTaGGGCTGTTTACATCTTTCCAGGCAGCTGGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: NTAPGLGLSVHY*GCLHLSRQLAK Trigger: TTTAGCCAGCTGCCTGGAAAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | GGCGGACAGAGGCAGGAGGCAACTTTCAGGCCAGCCTaGTCTACAGAACAATTCCAGGACAGCTATAAATAC | + |
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Preference number: 3 (lower is better) Translates to: GGQRQEATFRPA*STEQFQDSYKY Trigger: GTATTTATAGCTGTCCTGGAATTGTTCTGTAGACCAGGCTGGCCTGAAAGTTGCCTCCTGCCTCTGTCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | AATCCTGAACCTTCCAGTCTCCACGGGGTCCAAAGATaGCTTAGAACTGTGTGCCCAAGACTGGCCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NPEPSSLHGVQR*LRTVCPRLASN Trigger: GTTTGAGGCCAGTCTTGGGCACACAGTTCTAAGCCATCTTTGGACCCCGTGGAGACTGGAAGGTTCAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCTCTTGCCTTCTGGCCTaGCTGACCAGCACCAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: FRNEMWTASTAQDVLFLVSCLLA*LTSTNA Trigger: AGCGTTGGTGCTGGTCAGCAAGGCCAGAAGGCAAGA...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | TTAATCAGCCTCAAAGTAAAACAGCATCTCCACCTCTaGAACTTCCAGGGCCAGGGCATCCAGTGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LISLKVKQHLHL*NFQGQGIQCTL Trigger: CAGTGTGCACTGGATGCCCTGGCCCTGGAAGTTGCAGAGGTGGAGATGCTGTTTTACTTTGAGGCTGATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTGCACACTGCAGAGTACCTCTGTAAGCAGTGCCCTGTGGTCTTCTCCACGTATTAGAGAAAGGCTCTaGAGTGAATGGAGTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QCTLQSTSVSSALWSSPRIRERL*SEWSCP Trigger: TGGACAACTCCATTCACTCAAGAGCCTTTCTCTAAT...ACGTGGAGAAGACCACAGGGCACTGCTTACAGAGGTACTCTGCAGTGTGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTGCACACTGCAGAGTACCTCTGTAAGCAGTGCCCTGTGGTCTTCTCCACGTGTAGTGTTTAAGGACTaGGGATCAAAAGGCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QCTLQSTSVSSALWSSPRVVFKD*GSKGLE Trigger: TTCTAGGCCTTTTGATCCCAAGTCCTTAAACACTAC...ACGTGGAGAAGACCACAGGGCACTGCTTACAGAGGTACTCTGCAGTGTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | GGTCAGGGTGCACACAGGTCTAATCCCTGTGCTGTTTaGATCCCGGTGTTTGAAAGATTAGGAGTTAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGAHRSNPCAV*IPVFERLGVKC Trigger: GCACTTAACTCCTAATCTTTCAAACACCGGGATGCAAACAGCACAGGGATTAGACCTGTGTGCACCCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | AATTCACATCCCAGACACCAAACCCACAGCAGACACTaGTATTCTCTCACCTCCTGGGATCAAGGAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSHPRHQTHSRH*YSLTSWDQGRR Trigger: CCTTCTTCCTTGATCCCAGGAGGTGAGAGAATAGCAGTGTCTGCTGTGGGTTTGGTGTCTGGGATGTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGAATGAGATGTGGACAGCTTCAACAGCACAGGATGTGCTGTTCCTAGTCGTGAGAAGAATGGATTaGTCTGGCACCAGCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: FRNEMWTASTAQDVLFLVVRRMD*SGTSHT Trigger: GGTGTGGCTGGTGCCAGACAAATCCATTCTTCTCAC...GACTAGGAACAGCACATCCTGTGCTGTTGAAGCTGTCCACATCTCATTCCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | TTGTCGCAACCAAAACAAGCATCTAGTGTTCACAAGTaGCAGTGCCAAAGCCCCACATCTGTCCTTCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSQPKQASSVHK*QCQSPTSVLRA Trigger: TGCACGAAGGACAGATGTGGGGCTTTGGCACTGTCACTTGTGAACACTAGATGCTTGTTTTGGTTGCGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR-3UTR CAA 90 bp | AACACAGCACCTGGACTTGGCCTCAGTGTGCACTACTGGGGCTGTTTACATCTTCTGCTTTTATCTCAGTaGGGTGTTAATCTTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NTAPGLGLSVHYWGCLHLLLLSQ*GVNLAF Trigger: GAAGGCAAGATTAACACCCAACTGAGATAAAAGCAG...AAGATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | ATACTAACACTACTGAGGAATGAAGGTGGGAACAACTaGGTTCCTGTTTGGTCCTGTGAGGGCTGGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: ILTLLRNEGGNN*VPVWSCEGWKT Trigger: CGTTTTCCAGCCCTCACAGGACCAAACAGGAACTCAGTTGTTCCCACCTTCATTCCTCAGTAGTGTTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | GTTTGCATCCCGGTGTTTGAAAGATTAGGAGTTAAGTaGCCAGAGCACAGGAAGCCACTAATAGACAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VCIPVFERLGVK*PEHRKPLIDRS Trigger: GCTTCTGTCTATTAGTGGCTTCCTGTGCTCTGGGCACTTAACTCCTAATCTTTCAAACACCGGGATGCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | GAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTGGTaGCCACTTCACCCACTTAGAATTCACATCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ESLSSSFSLSYW*PLHPLRIHIPD Trigger: GTCTGGGATGTGAATTCTAAGTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | GCTGAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTaGTGGCCACTTCACCCACTTAGAATTCACATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AESLSSSFSLSY*WPLHPLRIHIP Trigger: TGGGATGTGAATTCTAAGTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | GGTTATTCTGAAATAATCACCAGCTGGAGGTGGACCTaGAGACACTCAACAGAACCAACTGACCTAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GYSEIITSWRWT*RHSTEPTDLML Trigger: CAGCATTAGGTCAGTTGGTTCTGTTGAGTGTCTTCAGGTCCACCTCCAGCTGGTGATTATTTCAGAATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR GCA 72 bp | CAAGTGACAGTGCCAAAGCCCCACATCTGTCCTTCGTaGAAACAAACTTGGCTTAATCAGCCTCAAAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVTVPKPHICPS*KQTWLNQPQSK Trigger: TTTACTTTGAGGCTGATTAAGCCAAGTTTGTTTGCACGAAGGACAGATGTGGGGCTTTGGCACTGTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | CCAAAGCCCCACATCTGTCCTTCGTGCAAACAAACTTaGCTTAATCAGCCTCAAAGTAAAACAGCATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PKPHICPSCKQT*LNQPQSKTASP Trigger: TGGAGATGCTGTTTTACTTTGAGGCTGATTAAGCCAAGTTTGTTTGCACGAAGGACAGATGTGGGGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | ACACACCAGGGAGAGGGTAACCTGTCCTGTATTGATTaGGTAAGGGTAAAATTACCTTACTCCCAAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: THQGEGNLSCID*VRVKLPYSQNM Trigger: CATGTTTTGGGAGTAAGGTAATTTTACCCTTACCCAATCAATACAGGACAGGTTACCCTCTCCCTGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | ATAGGATCTAATCCTGATACTAACACTACTGAGGAATaGAGGTGGGAACAACTGAGTTCCTGTTTGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IGSNPDTNTTEE*RWEQLSSCLVL Trigger: CAGGACCAAACAGGAACTCAGTTGTTCCCACCTTCATTCCTCAGTAGTGTTAGTATCAGGATTAGATCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | AGCTGCAGAGCGCCATCAGCATTATTTAGAGCTGGCTaGTATTTCAACTTCATAGTTGATGCAGAGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SCRAPSALFRAG*YFNFIVDAENT Trigger: AGTGTTCTCTGCATCAACTATGAAGTTGAAATATCAGCCAGCTCTAAATAATGCTGATGGCGCTCTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | CCACCAGCAAACATTAGAGAAAGGCTCTTGAGTGAATaGAGTTGTCCAAAGCTGTTATCCAAACACCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PPANIRERLLSE*SCPKLLSKHQT Trigger: TGTTTGGTGTTTGGATAACAGCTTTGGACAACTCCATTCACTCAAGAGCCTTTCTCTAATGTTTGCTGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CCA 72 bp | AAACTCTTGAAAAACAAACATGGAGGCAAATGCCTGTaGTCCCAGTACTTGGGAATTAGAGCATCCATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KLLKNKHGGKCL*SQYLGIRASII Trigger: GATGATGGATGCTCTAATTCCCAAGTACTGGGACCACAGGCATTTGCCTCCATGTTTGTTTTTCAAGAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | AAGAAATGGGTGTGCTTTTTACATAACAATTTTGGGTaGGCATTTGATCCTGTAAGCTGCAGAGCGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: KKWVCFLHNNFG*AFDPVSCRAPS Trigger: TGATGGCGCTCTGCAGCTTACAGGATCAAATGCTCACCCAAAATTGTTATGTAAAAAGCACACCCATTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR TCA 72 bp | ATTCAGAATATAAACAAGTACAAGGTCTGGTTATTCTaGAATAATCACCAGCTGGAGGTGGACCTGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: IQNINKYKVWLF*NNHQLEVDLKT Trigger: TGTCTTCAGGTCCACCTCCAGCTGGTGATTATTTCAGAATAACCAGACCTTGTACTTGTTTATATTCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | CTGCTGGACAGAGATGCAGGAACACAGCACCTGGACTaGGCCTCAGTGTGCACTACTGGGGCTGTTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLDRDAGTQHLD*ASVCTTGAVYI Trigger: GATGTAAACAGCCCCAGTAGTGCACACTGAGGCCAAGTCCAGGTGCTGTGTTCCTGCATCTCTGTCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| CDS-3UTR GCA 90 bp | CTGAGTCACTGTCATCAAGTTTCTCCCTTTCCTATTGGTGGCCACTTCACCCACGGTGGCGGAAGAGTCTaGTGTAACACTTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHCHQVSPFPIGGHFTHGGGRV*CNTCSS Trigger: GCTGCTGCAAGTGTTACAGCAGACTCTTCCGCCACC...GTGGGTGAAGTGGCCACCAATAGGAAAGGGAGAAACTTGATGACAGTGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | TGTGCCCAAGACTGGCCTCAAACTCACAACCCAGCCTaGACGTCTTCCTTATCAGTGATAAGCAGAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAQDWPQTHNPA*TSSLSVISRVR Trigger: TCTGACTCTGCTTATCACTGATAAGGAAGACGTCAAGGCTGGGTTGTGAGTTTGAGGCCAGTCTTGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | AACAAACATGGAGGCAAATGCCTGTGGTCCCAGTACTaGGGAATTAGAGCATCCATCATCACCCTGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKHGGKCLWSQY*GIRASIITLIG Trigger: TCCTATCAGGGTGATGATGGATGCTCTAATTCCCAAGTACTGGGACCACAGGCATTTGCCTCCATGTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | CATGCATTACCTACCAAGAACGTAGTGTTTAAGGACTaGGGATCAAAAGGCCTAGAAGGACTCATGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HALPTKNVVFKD*GSKGLEGLMEE Trigger: CTCTTCCATGAGTCCTTCTAGGCCTTTTGATCCCAAGTCCTTAAACACTACGTTCTTGGTAGGTAATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | ATGAACACTTCATTTTCTGACGTGAGAAGAATGGATTaGTCTGGCACCAGCCACACCACTTCCATGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MNTSFSDVRRMD*SGTSHTTSMTV Trigger: TACTGTCATGGAAGTGGTGTGGCTGGTGCCAGACAAATCCATTCTTCTCACGTCAGAAAATGAAGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| 3UTR CAA 72 bp | CTAAAATACTTTCCATACTGGGCAGTAAACAGGCTTTaGTTTACTAAAGGGGTGAGATGGGAGAGGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKYFPYWAVNRL*FTKGVRWERAL Trigger: TAAGGCCCTCTCCCATCTCACCCCTTTAGTAAACAAAAGCCTGTTTACTGCCCAGTATGGAAAGTATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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| CDS-3UTR CAA 90 bp | TGGTCCTGTGAGGGCTGGAAAACGAAGGCAGCTGGATCTTTGAGTTCTGGGCCAACACAGCAATGGCATTaGTCAGGTGGTCCACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSCEGWKTKAAGSLSSGPTQQWH*SGGPHP Trigger: AGGGTGTGGACCACCTGACAAATGCCATTGCTGTGT...TGGCCCAGAACTCAAAGATCCAGCTGCCTTCGTTTTCCAGCCCTCACAGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179857.3 |
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