Pregenerated sensors for TOM1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020541Ensembl transcript IDs: ENSMUST00000020849.9, ENSMUST00000107867.8, ENSMUST00000107868.8, ENSMUST00000107869.9, ENSMUST00000154599.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCAGACAATGGGCAAGCTGTGGGAGACAGCTTTCTCTCACTGTaGGGGTCTCAGGAATCAGGGGAGCACGTGCCTTCACCGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AADNGQAVGDSFLSL*GSQESGEHVPSPAE Trigger: CTCTGCCGGTGAAGGCACGTGCTCCCCTGATTCCTGAGACCCTCACAGTGAGAGAAAGCTGTCTCCCACAGCTTGCCCATTGTCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 90 bp | ACAGCTTTCTCTCACTGTGAGGGTCTCAGGAATCAGGGGAGCACGTaGCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: TAFSHCEGLRNQGST*LHRQSFLWLTQQCG Trigger: TCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGTGCTCCCCTGATTCCTGAGACCCTCACAGTGAGAGAAAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR CCA 90 bp | GGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATaGTCCACTGGGGCTCTCCCTGTTGGCAGGTCTTGTCTGTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: GQEVLTLLLKLPAEK*STGALPVGRSCLSG Trigger: GCCTGACAGACAAGACCTGCCAACAGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR CCA 90 bp | GTTGAAGCTTCCAGCAGAGAAATGGTCCACTGGGGCTCTCCCTGTTaGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: VEASSREMVHWGSPC*QVLSVRPLLIKYSF Trigger: AAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAGCTTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR CCA 90 bp | ACTACAGTAGCTCCTACCTGTAATCCCAGAGTTCTTACAGTGAGCTaGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: TTVAPTCNPRVLTVS*EVEPGESSCLYMHA Trigger: AGCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTAAGAACTCTGGGATTACAGGTAGGAGCTACTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 90 bp | TTAAAATTTATCTTCTTAATATGTGGGGAGGATGAATGCTACCCATaGTGCAGCAGACAATGGGCAAGCTGTGGGAGACAGCTTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LKFIFLICGEDECYP*CSRQWASCGRQLSL Trigger: GAGAGAAAGCTGTCTCCCACAGCTTGCCCATTGTCTGCTGCAGCATGGGTAGCATTCATCCTCCCCACATATTAAGAAGATAAATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR TCA 90 bp | GGTATTATGGTCCAGTTAGGTATTAGGTATAATAGGCAAATAATATaGCTTAATTTAGCAGGAGGAAAGCATGGCACTGGAGCTAATGTG | + |
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Preference number: 1 (lower is better) Translates to: GIMVQLGIRYNRQII*LNLAGGKHGTGANV Trigger: CACATTAGCTCCAGTGCCATGCTTTCCTCCTGCTAAATTAAGTCATATTATTTGCCTATTATACCTAATACCTAACTGGACCATAATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 90 bp | CACATCTATAATAATGTATCTGAAAACTTCGAAACAGAATCGACATaGAACTGTTTAGTTCATAGGCATGCTGGTTGCTGTTTTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: HIYNNVSENFETEST*NCLVHRHAGCCFPS Trigger: TGAAGGAAAACAGCAACCAGCATGCCTATGAACTAAACAGTTGCATGTCGATTCTGTTTCGAAGTTTTCAGATACATTATTATAGATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCCTTCCAGCAGAGAAATaGTCCACTGGGGCTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: YSELGGGARRIILPVYACLPAEK*STGALP Trigger: AGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAG...GCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGTGGGGCTCTCCCTGTTaGCAGGTCTTGTCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKWGSPC*QVLSVR Trigger: CCTGACAGACAAGACCTGCCAACAGGGAGAGCCCCA...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CCA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGATGCTGCAGCAGACAATaGGCAAGCTGTGGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRCCSRQ*ASCGRQ Trigger: CTGTCTCCCACAGCTTGCCCATTGTCTGCTGCAGCA...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR CAA 90 bp | GCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGAGGAGGAGACACTaGCTCCAAGTTTGCCTTCTGAGTGCAAGTGTGCCTTTTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: AELSLADPTVWRRRH*LQVCLLSASVPFSV Trigger: AACAGAAAAAGGCACACTTGCACTCAGAAGGCAAACTTGGAGCAAGTGTCTCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATGGGGCTCTCCCTGTTaGCAGGTCTTGTCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKWGSPC*QVLSVR Trigger: CCTGACAGACAAGACCTGCCAACAGGGAGAGCCCCA...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR CAA 90 bp | ATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTaGAAGCTTCCAGCAGAGAAATGGTCCACTGGGGCTCTCCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: IVRNSSVGQEVLTLL*KLPAEKWSTGALPV Trigger: AACAGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR TCA 90 bp | ACGTGCCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGAGGAGGAGCCTACTCAGGCACTTaGAATATAATTAAACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TCLHRQSFLWLTQQCGGGAYSGT*NIIKQV Trigger: GACTTGTTTAATTATATTTCAAGTGCCTGAGTAGGC...TCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR TCA 90 bp | GGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGAGTTAGAGCTTTCTCTGGCTaGCCCAACAGTGTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTSLKRVTTVAPTCNPRVRAFSG*PNSVEE Trigger: CTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCT...AACTCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATATGGGAGCAGGGCCGTaGGGTAGAGGCCAGCCGGAT | + |
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Preference number: 2 (lower is better) Translates to: LKQVVPGETALAFYKAKNMGAGP*GRGQPD Trigger: ATCCGGCTGGCCTCTACCTCACGGCCCTGCTCCCAT...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTTGGGGCTCTCCCTGTTaGCAGGTCTTGTCTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFWGSPC*QVLSVR Trigger: CCTGACAGACAAGACCTGCCAACAGGGAGAGCCCCA...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTCTTCCAGCAGAGAAATaGTCCACTGGGGCTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFLPAEK*STGALP Trigger: AGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAG...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR TCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTGTCAGGCCTCTGCTaGTCAAGTATTCCTTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKLSGLC*SSIPLE Trigger: CTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR GCA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGATATGCATGCTCTGGCTaGCCACACACAGATATAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRYACSG*PHTDIN Trigger: GTTTATATCTGTGTGTGGGCAGCCAGAGCATGCATA...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCCACAGTTTAACCAGTTaGCCTAGTTCTAGGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: YSELGGGARRIILPVYACHSLTS*PSSRQF Trigger: AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTG...GCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCTGTCAGGCCTCTGCTaGTCAAGTATTCCTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKVPHHRSVMICTDSNACLSGLC*SSIPLE Trigger: CTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR GCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATGATGAATGCTACCCATaGTGCAGCAGACAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LKQVVPGETALAFYKAKNDECYP*CSRQWA Trigger: TGCCCATTGTCTGCTGCAGCATGGGTAGCATTCATC...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATACAATGGGCAAGCTGTaGGAGACAGCTTTCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LKQVVPGETALAFYKAKNTMGKL*ETAFSH Trigger: GTGAGAGAAAGCTGTCTCCCACAGCTTGCCCATTGT...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTACAACAAGATTTTCCTaGAGTCTCAAGGCATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFTTRFS*SLKALS Trigger: TGACAATGCCTTGAGACTTCAGGAAAATCTTGTTGT...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCACAGTTTAACCAGTTaGCCTAGTTCTAGGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LKVPHHRSVMICTDSNACHSLTS*PSSRQF Trigger: AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATACAACAAGATTTTCCTaGAGTCTCAAGGCATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LKQVVPGETALAFYKAKNTTRFS*SLKALS Trigger: TGACAATGCCTTGAGACTTCAGGAAAATCTTGTTGT...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR TCA 72 bp | GGAGCACGTGCCTTCACCGGCAGAGCTTTCTCTGGCTaGCCCAACAGTGTGGAGGAGGAGACACTTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GARAFTGRAFSG*PNSVEEETLAP Trigger: TGGAGCAAGTGTCTCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 72 bp | TCTCACTGTGAGGGTCTCAGGAATCAGGGGAGCACGTaGCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAA | + |
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Preference number: 3 (lower is better) Translates to: SHCEGLRNQGST*LHRQSFLWLTQ Trigger: TTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGTGCTCCCCTGATTCCTGAGACCCTCACAGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR TCA 72 bp | AATGGGCAAGCTGTGGGAGACAGCTTTCTCTCACTGTaGGGGTCTCAGGAATCAGGGGAGCACGTGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: NGQAVGDSFLSL*GSQESGEHVPS Trigger: TGAAGGCACGTGCTCCCCTGATTCCTGAGACCCTCACAGTGAGAGAAAGCTGTCTCCCACAGCTTGCCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 72 bp | ACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTaGCTGTATATGCATGCTCTGGCTGCCCACACACAG | + |
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Preference number: 3 (lower is better) Translates to: TVSWEVEPGESS*LYMHALAAHTQ Trigger: CTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR CCA 72 bp | GGGGAGGATGAATGCTACCCATGCTGCAGCAGACAATaGGCAAGCTGTGGGAGACAGCTTTCTCTCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: GEDECYPCCSRQ*ASCGRQLSLTV Trigger: CACAGTGAGAGAAAGCTGTCTCCCACAGCTTGCCCATTGTCTGCTGCAGCATGGGTAGCATTCATCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CAA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTGGGGCTCTCCCTGTaGGCAGGTCTTGTCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKLGLSL*AGLVCQ Trigger: CTGACAGACAAGACCTGCCAACAGGGAGAGCCCCAG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR TCA 72 bp | CTCCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTaGTCAAGTATTCCTTTAGAGAGCTGGCCCTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LPVGRSCLSGLC*SSIPLESWPFV Trigger: CACAAAGGGCCAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CAA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACCCTGTTGGCAGGTCTaGTCTGTCAGGCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKPCWQV*SVRPLL Trigger: CAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR CCA 72 bp | GTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATaGTCCACTGGGGCTCTCCCTGTTGGCAGGTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: VLTLLLKLPAEK*STGALPVGRSC Trigger: ACAAGACCTGCCAACAGGGAGAGCCCCAGTGGACCATTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR GCA 72 bp | ATCTTCTTAATATGTGGGGAGGATGAATGCTACCCATaGTGCAGCAGACAATGGGCAAGCTGTGGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: IFLICGEDECYP*CSRQWASCGRQ Trigger: CTGTCTCCCACAGCTTGCCCATTGTCTGCTGCAGCATGGGTAGCATTCATCCTCCCCACATATTAAGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CAA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCCCTGTTGGCAGGTCTaGTCTGTCAGGCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LKVPHHRSVMICTDSNACPCWQV*SVRPLL Trigger: CAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CAA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCTGGGGCTCTCCCTGTaGGCAGGTCTTGTCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LKVPHHRSVMICTDSNACLGLSL*AGLVCQ Trigger: CTGACAGACAAGACCTGCCAACAGGGAGAGCCCCAG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR TCA 72 bp | TGTGGAGGAGGAGACACTTGCTCCAAGTTTGCCTTCTaGGTGCAAGTGTGCCTTTTTCTGTTAAGCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: CGGGDTCSKFAF*VQVCLFLLSLR Trigger: CCTCAAGCTTAACAGAAAAAGGCACACTTGCACTCAGAAGGCAAACTTGGAGCAAGTGTCTCCTCCTCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR GCA 72 bp | GGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATaGTCTGGCTGCCCACACACAGATATAAACTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: GGARRIILPVYA*SGCPHTDINCF Trigger: AAAGCAGTTTATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR-3UTR CAA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGAGTGTTAACTCTTCTGTaGAAGCTTCCAGCAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRVLTLL*KLPAEK Trigger: TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACAC...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
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| 3UTR CCA 72 bp | TGCCTGCACAATGTAAGAGTCCACAGTTTAACCAGTTaGCCTAGTTCTAGGCAGTTTTCCTCACAACAAGAT | + |
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Preference number: 3 (lower is better) Translates to: CLHNVRVHSLTS*PSSRQFSSQQD Trigger: ATCTTGTTGTGAGGAAAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGAATCATCTTGCCTGTATATGCATGCTCTGGCTGCCCACACACAGATATTATGTAAATGATGCATaGTCCAGTTTTCCAAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QENHLACICMLWLPTHRYYVNDA*SSFPRV Trigger: GACTCTTGGAAAACTGGACAATGCATCATTTACATA...ATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| 3UTR GCA 72 bp | AGGAGAATCATCTTGCCTGTATATGCATGCTCTGGCTaGCCACACACAGATATAAACTGCTTTAACAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRIILPVYACSG*PHTDINCFNSS Trigger: TGAACTGTTAAAGCAGTTTATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| 3UTR TCA 72 bp | TATTCCAAGCCTGAAGAATATATGACTGCCCAAGTGTaGCTATTAAAAACTGCATCATGGGCCAGGGATATG | + |
|
Preference number: 3 (lower is better) Translates to: YSKPEEYMTAQV*LLKTASWARDM Trigger: CATATCCCTGGCCCATGATGCAGTTTTTAATAGTCACACTTGGGCAGTCATATATTCTTCAGGCTTGGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| 3UTR GCA 72 bp | AACAAGTTCAAAACTCAGTCTGTGGTGAAAAGATGCTaGTATCCTGTGATGGTGCTTAAGGGTAGGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: NKFKTQSVVKRC*YPVMVLKGRKQ Trigger: TTGTTTCCTACCCTTAAGCACCATCACAGGATAGCAGCATCTTTTCACCACAGACTGAGTTTTGAACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| 3UTR GCA 72 bp | AAGAACAAGTTCAAAACTCAGTCTGTGGTGAAAAGATaGTGCTATCCTGTGATGGTGCTTAAGGGTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KNKFKTQSVVKR*CYPVMVLKGRK Trigger: TTTCCTACCCTTAAGCACCATCACAGGATAGCAGCATCTTTTCACCACAGACTGAGTTTTGAACTTGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGCCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGAGGAGGATCCATGATCCTCTCCTaGATCTCCCGACCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCLHRQSFLWLTQQCGGGSMILS*ISRPVL Trigger: CAAGACAGGTCGGGAGATGCAGGAGAGGATCATGGA...TCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGACCTCTGGTTTGCTGCTaGTGCTGCTGTGGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRPLVCC*CCCGGV Trigger: CACACCGCCACAGCAGCAGCAGCAGCAAACCAGAGG...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| 3UTR CAA 72 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTaGCCTGTATATGCATGCTCTGGCTGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: YSELGGGARRII*PVYACSGCPHT Trigger: TGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAATCATCTTGCCTGTATATGCATGCTCTGGCTGCCCACACACAGATATCCTCTGGTTTGCTGCTaGTGCTGCTGTGGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QENHLACICMLWLPTHRYPLVCC*CCCGGV Trigger: CACACCGCCACAGCAGCAGCAGCAGCAAACCAGAGG...ATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCCTCTGGTTTGCTGCTaGTGCTGCTGTGGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKPLVCC*CCCGGV Trigger: CACACCGCCACAGCAGCAGCAGCAGCAAACCAGAGG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCAGCCTCTGGTTTGCTaGTGCTGCTGCTGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKQPLVC*CCCCGG Trigger: ACCGCCACAGCAGCAGCAGCAGCAAACCAGAGGCTG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGCTCGAGGCGAGGTTTTaGCTGGTCCTCTGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELLEARF*LVLWGN Trigger: GTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAG...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGAAAGGGTGGCAGCCTCTaGTTTGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRKGGSL*FAAAAA Trigger: AGCAGCAGCAGCAGCAAACCAGAGGCTGCCACCCTT...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGAAGGGTGGCAGCCTCTaGTTTGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELKGGSL*FAAAAA Trigger: AGCAGCAGCAGCAGCAAACCAGAGGCTGCCACCCTT...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGACAGGGCTCAGAGAGCTaGCACTTAGGCCTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRQGSES*HLGLKA Trigger: AGCTTTCAGGCCTAAGTGTCAGCTCTCTGAGCCCTG...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGCAGGGCTCAGAGAGCTaGCACTTAGGCCTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELQGSES*HLGLKA Trigger: AGCTTTCAGGCCTAAGTGTCAGCTCTCTGAGCCCTG...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGCCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGAGGAGGAAATTATAGAAGAAAGTaGAGGTGCAGTGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCLHRQSFLWLTQQCGGGNYRRK*RCSGDR Trigger: TCTGTCCCCACTGCACCTGCACTTTCTTCTATAATT...TCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACAGCCTCTGGTTTGCTaGTGCTGCTGCTGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKQPLVC*CCCCGG Trigger: ACCGCCACAGCAGCAGCAGCAGCAAACCAGAGGCTG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGATTAGCACTGGATGACTaGTTGGCAAGGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRLALDD*LARVAA Trigger: GGCTGCCACCCTTGCCAAGCAGTCATCCAGTGCTAA...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTCGAGGCGAGGTTTTaGCTGGTCCTCTGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKLEARF*LVLWGN Trigger: GTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGATCTTTTAGCACTGGATaGCTGCTTGGCAAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTSLKRVTTVAPTCNPRSFSTG*LLGKGG Trigger: GCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGA...TCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGTCTTTTAGCACTGGATaGCTGCTTGGCAAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELSFSTG*LLGKGG Trigger: GCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGA...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGATCTTTTAGCACTGGATaGCTGCTTGGCAAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRSFSTG*LLGKGG Trigger: GCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGA...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGTCCATGATCCTCTCCTaGATCTCCCGACCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELSMILS*ISRPVL Trigger: CAAGACAGGTCGGGAGATGCAGGAGAGGATCATGGA...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACACATCTACACCTCCTaGGAAGCCCTGGGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKHIYTS*EALGPG Trigger: ACCTGGTCCCAGGGCTTCCCAGGAGGTGTAGATGTG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CCA 90 bp | GGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGAGTTCTCGAGGCGAGGTTTTaGCTGGTCCTCTGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSLKRVTTVAPTCNPRVLEARF*LVLWGN Trigger: GTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAG...AACTCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACTCGAGGCGAGGTTTTaGCTGGTCCTCTGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKLEARF*LVLWGN Trigger: GTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAAAGGGTGGCAGCCTCTaGTTTGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKKGGSL*FAAAAA Trigger: AGCAGCAGCAGCAGCAAACCAGAGGCTGCCACCCTT...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCTTACCTCGTAGTAATTaGGTGGCTGGAGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YSELGGGARRIILPVYACLPRSN*VAGDRR Trigger: ACGGCGATCTCCAGCCACCCAATTACTACGAGGTAA...GCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACAGGGCTCAGAGAGCTaGCACTTAGGCCTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKQGSES*HLGLKA Trigger: AGCTTTCAGGCCTAAGTGTCAGCTCTCTGAGCCCTG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCATTATGTCACAGATGTaGAGGAACTGGCCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSELGGGARRIILPVYACIMSQM*RNWPQS Trigger: AGACTGGGGCCAGTTCCTGCACATCTGTGACATAAT...GCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATTAGCACTGGATGACTaGTTGGCAAGGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKLALDD*LARVAA Trigger: GGCTGCCACCCTTGCCAAGCAGTCATCCAGTGCTAA...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTAAGGGTGGCAGCCTCTaGTTTGCTGCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFKGGSL*FAAAAA Trigger: AGCAGCAGCAGCAGCAAACCAGAGGCTGCCACCCTT...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| 3UTR CAA 72 bp | AACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTaGAAGCTTCCAGCAGAGAAATGGTCCACTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSVGQEVLTLL*KLPAEKWSTGA Trigger: AGCCCCAGTGGACCATTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAAAATCCCTCTGTGGCTaGAGACTGGGATACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRKSLCG*RLGYKL Trigger: CAACTTGTATCCCAGTCTTCAGCCACAGAGGGATTT...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | GGAACCAGCCTTAAAAGAGTGACTACAGTAGCTCCTACCTGTAATCCCAGAGTTCTCGGGCCACAGTTCTaGACGCACATGTCAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTSLKRVTTVAPTCNPRVLGPQF*THMSMS Trigger: ACTCATTGACATGTGCGTGCAGAACTGTGGCCCGAG...AACTCTGGGATTACAGGTAGGAGCTACTGTAGTCACTCTTTTAAGGCTGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCCTCTGGTTTGCTGCTaGTGCTGCTGTGGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACPLVCC*CCCGGV Trigger: CACACCGCCACAGCAGCAGCAGCAGCAAACCAGAGG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTTTAGCACTGGATGACTaGTTGGCAAGGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFLALDD*LARVAA Trigger: GGCTGCCACCCTTGCCAAGCAGTCATCCAGTGCTAA...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGTTCAAGATTCTGTTCTaGGTCTCCAGCGGTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELFKILF*VSSGKV Trigger: CACCTTACCGCTGGAGACCCAGAACAGAATCTTGAA...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTCGTAGTAATTGGGTaGCTGGAGATCGCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKLVVIG*LEIAVF Trigger: AAAGACGGCGATCTCCAGCCACCCAATTACTACGAG...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGTTACCTCGTAGTAATTaGGTGGCTGGAGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKLPRSN*VAGDRR Trigger: ACGGCGATCTCCAGCCACCCAATTACTACGAGGTAA...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGGCACGCACATGTCAATaGGTGATAAGGAAAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELARTCQ*VIRKVG Trigger: TCCAACTTTCCTTATCACTCATTGACATGTGCGTGC...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGCTTCAAAGCTTTTACTaGATCTTTTGGCCCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELLQSFY*IFWPVL Trigger: CAGGACGGGCCAAAAGATGCAGTAAAAGCTTTGAAG...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATCAGCCTCTGGTTTGCTaGTGCTGCTGCTGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVVPGETALAFYKAKNQPLVC*CCCCGG Trigger: ACCGCCACAGCAGCAGCAGCAGCAAACCAGAGGCTG...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGATTCACAATCAGAGATTaGAAACTCGGGCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRFTIRD*KLGPQF Trigger: GAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAA...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCACATCTACACCTCCTaGGAAGCCCTGGGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACHIYTS*EALGPG Trigger: ACCTGGTCCCAGGGCTTCCCAGGAGGTGTAGATGTG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAACTCGTAGTAATTGGGTaGCTGGAGATCGCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKLVVIG*LEIAVF Trigger: AAAGACGGCGATCTCCAGCCACCCAATTACTACGAG...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATTACCTCGTAGTAATTaGGTGGCTGGAGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKLPRSN*VAGDRR Trigger: ACGGCGATCTCCAGCCACCCAATTACTACGAGGTAA...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAAAATTATCATATGTGTaGCTCGAGGCGAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRKLSYV*LEARFW Trigger: CCAAAACCTCGCCTCGAGTCACACATATGATAATTT...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGAAATTATCATATGTGTaGCTCGAGGCGAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELKLSYV*LEARFW Trigger: CCAAAACCTCGCCTCGAGTCACACATATGATAATTT...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAATTATGTCACAGATGTaGAGGAACTGGCCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKIMSQM*RNWPQS Trigger: AGACTGGGGCCAGTTCCTGCACATCTGTGACATAAT...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGAATTATAGAAGAAAGTaGAGGTGCAGTGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELNYRRK*RCSGDR Trigger: TCTGTCCCCACTGCACCTGCACTTTCTTCTATAATT...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTTTACCTCGTAGTAATTaGGTGGCTGGAGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFLPRSN*VAGDRR Trigger: ACGGCGATCTCCAGCCACCCAATTACTACGAGGTAA...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAGCACGCACATGTCAATaGGTGATAAGGAAAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKARTCQ*VIRKVG Trigger: TCCAACTTTCCTTATCACTCATTGACATGTGCGTGC...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTAAATCCCTCTGTGGCTaGAGACTGGGATACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFKSLCG*RLGYKL Trigger: CAACTTGTATCCCAGTCTTCAGCCACAGAGGGATTT...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCTCTTTTAGCACTGGATaGCTGCTTGGCAAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACSFSTG*LLGKGG Trigger: GCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGA...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCTCGGGCCACAGTTCTaGACGCACATGTCAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACLGPQF*THMSMS Trigger: ACTCATTGACATGTGCGTGCAGAACTGTGGCCCGAG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGATCTGGGGAAACAAGGTaGGTATTTCTATATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRSGETR*VFLYLL Trigger: CAGAAGATATAGAAATACCCACCTTGTTTCCCCAGA...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAAAATTATCATATGTGTaGCTCGAGGCGAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKKLSYV*LEARFW Trigger: CCAAAACCTCGCCTCGAGTCACACATATGATAATTT...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTTTCACAATCAGAGATTaGAAACTCGGGCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFFTIRD*KLGPQF Trigger: GAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAA...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAGAATCATCTTGCCTGTATATGCATGCTCTGGCTGCCCACACACAGATATTCTGTGGCTGAAGACTaGGATACAAGTTGTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QENHLACICMLWLPTHRYSVAED*DTSCLL Trigger: TAACAAACAACTTGTATCCCAGTCTTCAGCCACAGA...ATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAGAATCATCTTGCCTGTATATGCATGCTCTGGCTGCCCACACACAGATATTCTGGGGAAACAAGGTaGGTATTTCTATATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QENHLACICMLWLPTHRYSGETR*VFLYLL Trigger: CAGAAGATATAGAAATACCCACCTTGTTTCCCCAGA...ATATCTGTGTGTGGGCAGCCAGAGCATGCATATACAGGCAAGATGATTCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCCTCGTAGTAATTGGGTaGCTGGAGATCGCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACLVVIG*LEIAVF Trigger: AAAGACGGCGATCTCCAGCCACCCAATTACTACGAG...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCAAATCCCTCTGTGGCTaGAGACTGGGATACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACKSLCG*RLGYKL Trigger: CAACTTGTATCCCAGTCTTCAGCCACAGAGGGATTT...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGTATTCTCCATCAATATaGCTGTCATCACTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WQVLSVRPLLIKYSFRELYSPSI*LSSLSH Trigger: ATGTGAAAGTGATGACAGCCATATTGATGGAGAATA...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATCTGGGGAAACAAGGTaGGTATTTCTATATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKSGETR*VFLYLL Trigger: CAGAAGATATAGAAATACCCACCTTGTTTCCCCAGA...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCTTCACAATCAGAGATTaGAAACTCGGGCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACFTIRD*KLGPQF Trigger: GAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAA...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAACAGGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAAGAATTTCAAGATTCTGTTCTaGGTCTCCAGCGGTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQVVPGETALAFYKAKNFKILF*VSSGKV Trigger: CACCTTACCGCTGGAGACCCAGAACAGAATCTTGAA...ATTCTTAGCTTTATAAAATGCCAGTGCAGTCTCTCCTGGTACCACCTGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGTATTCTCCATCAATATaGCTGTCATCACTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKYSPSI*LSSLSH Trigger: ATGTGAAAGTGATGACAGCCATATTGATGGAGAATA...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTTCTGTGGCTGAAGACTaGGATACAAGTTGTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFSVAED*DTSCLL Trigger: TAACAAACAACTTGTATCCCAGTCTTCAGCCACAGA...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR TCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCAAATTATCATATGTGTaGCTCGAGGCGAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACKLSYV*LEARFW Trigger: CCAAAACCTCGCCTCGAGTCACACATATGATAATTT...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAATATTCTCCATCAATATaGCTGTCATCACTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKYSPSI*LSSLSH Trigger: ATGTGAAAGTGATGACAGCCATATTGATGGAGAATA...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCTCTGTGGCTGAAGACTaGGATACAAGTTGTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACSVAED*DTSCLL Trigger: TAACAAACAACTTGTATCCCAGTCTTCAGCCACAGA...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCTCTGGGGAAACAAGGTaGGTATTTCTATATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVPHHRSVMICTDSNACSGETR*VFLYLL Trigger: CAGAAGATATAGAAATACCCACCTTGTTTCCCCAGA...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| 3UTR CAA 72 bp | CATAAGCAAATACAATCTGAAACTAAGGAAGGCTTGTaGCAATATTCCCAGTACATTGGGTTAGGTATTATG | + |
|
Preference number: 4 (lower is better) Translates to: HKQIQSETKEGL*QYSQYIGLGIM Trigger: CATAATACCTAACCCAATGTACTGGGAATATTGCAACAAGCCTTCCTTAGTTTCAGATTGTATTTGCTTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS TCA 90 bp | AGTGCAGGTGCAGTGGGGACAGATGTCGGTCGATTTGGTGAGATCTaGCCAGCCTCCTGCCTTGTCTCAGGCTCTCCATCCGAGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGAVGTDVGRFGEI*PASCLVSGSPSEGG Trigger: CCCGCCCTCGGATGGAGAGCCTGAGACAAGGCAGGAGGCTGGTCAGATCTCACCAAATCGACCGACATCTGTCCCCACTGCACCTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS GCA 90 bp | AGTAATTGGGTGGCTGGAGATCGCCGTCTTTTAGCACTGGATGACTaGTTGGCAAGGGTGGCAGCCTCTGGTTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNWVAGDRRLLALDD*LARVAASGLLLLLL Trigger: CAGCAGCAGCAGCAGCAAACCAGAGGCTGCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGACGGCGATCTCCAGCCACCCAATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 90 bp | TGGGGCTTAGGTCGAGGAGATCGCAGGAAGGAGCAGAGGGCTCGCTaGAAGTACGGGTTGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WGLGRGDRRKEQRAR*KYGLLLSGSSSVPK Trigger: TTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCGTACTTCCAGCGAGCCCTCTGCTCCTTCCTGCGATCTCCTCGACCTAAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGTGGCAGCCTCTGGTTaGCTGCTGCTGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRVAASG*LLLLLW Trigger: CCACAGCAGCAGCAGCAGCAAACCAGAGGCTGCCAC...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGGTGGCAGCCTCTGGTTaGCTGCTGCTGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQVLSVRPLLIKYSFRELVAASG*LLLLLW Trigger: CCACAGCAGCAGCAGCAGCAAACCAGAGGCTGCCAC...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAACTCGAGGCGAGGTTTaGGCTGGTCCTCTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRTRGEV*AGPLGK Trigger: TTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAGT...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAGTGGCAGCCTCTGGTTaGCTGCTGCTGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKVAASG*LLLLLW Trigger: CCACAGCAGCAGCAGCAGCAAACCAGAGGCTGCCAC...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGATCCGAGGGCGGGAATaGAACCCCTTTCTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WQVLSVRPLLIKYSFRELIRGRE*NPFLQQ Trigger: CTGCTGAAGAAAGGGGTTCAATTCCCGCCCTCGGAT...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTGACCAGCCTCCTGCCTaGTCTCAGGCTCTCCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFDQPPA*SQALHP Trigger: CGGATGGAGAGCCTGAGACAAGGCAGGAGGCTGGTC...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CAA 90 bp | ACGTGCCTTCACCGGCAGAGCTTTCTCTGGCTGACCCAACAGTGTGGAGGAGGACTGTTCCAAAAGCCTTaGTTGGTTTCGAGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TCLHRQSFLWLTQQCGGGLFQKP*LVSSKP Trigger: AGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAG...TCCTCCTCCACACTGTTGGGTCAGCCAGAGAAAGCTCTGCCGGTGAAGGCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CAA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGACTCGAGGCGAGGTTTaGGCTGGTCCTCTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKTRGEV*AGPLGK Trigger: TTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAGT...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | GGCATTGTCAGGAACAGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGATCCGAGGGCGGGAATaGAACCCCTTTCTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GIVRNSSVGQEVLTLLLKIRGRE*NPFLQQ Trigger: CTGCTGAAGAAAGGGGTTCAATTCCCGCCCTCGGAT...CTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCTGTTCCTGACAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CAA 90 bp | TACAGTGAGCTGGGAGGTGGAGCCAGGAGAATCATCTTGCCTGTATATGCATGCCTTCACAATCAGAGATaGGAAACTCGGGCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSELGGGARRIILPVYACLHNQR*ETRATV Trigger: AACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAAG...GCATGCATATACAGGCAAGATGATTCTCCTGGCTCCACCTCCCAGCTCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020849.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACAATGTAAGAGTCCACAGTTTAACCAGTTGGCCTAGTTCTAGGCAGTTTACTCGAGGCGAGGTTTaGGCTGGTCCTCTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHNVRVHSLTSWPSSRQFTRGEV*AGPLGK Trigger: TTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAGT...AAACTGCCTAGAACTAGGCCAACTGGTTAAACTGTGGACTCTTACATTGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCGTGGCAGCCTCTGGTTaGCTGCTGCTGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVPHHRSVMICTDSNACVAASG*LLLLLW Trigger: CCACAGCAGCAGCAGCAGCAAACCAGAGGCTGCCAC...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 90 bp | TGTGACTCGAGGCGAGGTTTTGGCTGGTCCTCTGGGGAAACAAGGTaGGTATTTCTATATCTTCTGATGCTAGTAAATCCCTCTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CDSRRGFGWSSGETR*VFLYLLMLVNPSVA Trigger: AGCCACAGAGGGATTTACTAGCATCAGAAGATATAGAAATACCCACCTTGTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGACTTCACAATCAGAGATaGGAAACTCGGGCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRLHNQR*ETRATV Trigger: AACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAAG...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS GCA 90 bp | GCTGTCATCACTTTCACATTCATTTTCACCATATCTAGTTCACTATaGAGCTTCCCGATCTCCTGCCTTGTCTCAGGCTCTCCATCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVITFTFIFTISSSL*SFPISCLVSGSPSE Trigger: CTCGGATGGAGAGCCTGAGACAAGGCAGGAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAATGAATGTGAAAGTGATGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154599.2 |
||
| CDS CCA 90 bp | CAGGTCAAGGTACACTTCCTTCACCTCACTCACATCTACACCTCCTaGGAAGCCCTGGGACCAGGTCTTAATGAAATTCAAGATTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVKVHFLHLTHIYTS*EALGPGLNEIQDSV Trigger: AACAGAATCTTGAATTTCATTAAGACCTGGTCCCAGGGCTTCCCAGGAGGTGTAGATGTGAGTGAGGTGAAGGAAGTGTACCTTGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000154599.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGGCAGTCACTATGACTTaGAGCTTCTTTCTGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WQVLSVRPLLIKYSFRELAVTMT*SFFLVV Trigger: TACCACCAGAAAGAAGCTCAAAGTCATAGTGACTGC...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 90 bp | CGGGTTGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTTGTTaGTTTCGAGTAAACCTCTCATATCCAAGGACGGCATTATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVASVRFLFCSKSLC*FRVNLSYPRTALFR Trigger: TCTGAATAATGCCGTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGACTGTTCCAAAAGCCTTaGTTGGTTTCGAGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PCWQVLSVRPLLIKYSFRLFQKP*LVSSKP Trigger: AGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAG...TCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCAACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTCTTGTCTGTCAGGCCTCTGCTGATCAAGTATTCCTTTAGAGAGCTGCTGTTCCAAAAGCCTTaGTTGGTTTCGAGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: WQVLSVRPLLIKYSFRELLFQKP*LVSSKP Trigger: AGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAG...CAGCTCTCTAAAGGAATACTTGATCAGCAGAGGCCTGACAGACAAGACCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS TCA 90 bp | AACCTCTCATATCCAAGGACGGCATTATTCAGATCCTCGTTCACTTaGATTAGCTCCATAGTCACGTCTTCATTTTCCACCACCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLSYPRTALFRSSFT*ISSIVTSSFSTTTS Trigger: GCTGGTGGTGGTGGAAAATGAAGACGTGACTATGGAGCTAATTCAAGTGAACGAGGATCTGAATAATGCCGTCCTTGGATATGAGAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGTTGGCCAGGAAGTGTTAACTCTTCTGTTGAAGCTTCCAGCAGAGAAAGCAGTCACTATGACTTaGAGCTTCTTTCTGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSVGQEVLTLLLKLPAEKAVTMT*SFFLVV Trigger: TACCACCAGAAAGAAGCTCAAAGTCATAGTGACTGC...TTTCTCTGCTGGAAGCTTCAACAGAAGAGTTAACACTTCCTGGCCAACACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 90 bp | TCACTATGCAGCTTCCCGATCTTAATGAAATTCAAGATTCTGTTCTaGGTCTCCAGCGGTAAGGTGTATCTGGGATTCAGCAGCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SLCSFPILMKFKILF*VSSGKVYLGFSSLT Trigger: AGTTAAGCTGCTGAATCCCAGATACACCTTACCGCTGGAGACCCAGAACAGAATCTTGAATTTCATTAAGATCGGGAAGCTGCATAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107869.9 |
||
| CDS GCA 90 bp | GCTGTCATCACTTTCACATTCATTTTCACCATATCTAGTTCACTATaGAGCTTCCCGATCTGTTCTGGGACTAAGGAAATAGTTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVITFTFIFTISSSL*SFPICSGTKEIVGF Trigger: GAACCCAACTATTTCCTTAGTCCCAGAACAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAATGAATGTGAAAGTGATGACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAGTACCCCATCATAGATCTGTCATGATTTGTACTGATAGCAATGCCTGCGCAGTCACTATGACTTaGAGCTTCTTTCTGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKVPHHRSVMICTDSNACAVTMT*SFFLVV Trigger: TACCACCAGAAAGAAGCTCAAAGTCATAGTGACTGC...GCAGGCATTGCTATCAGTACAAATCATGACAGATCTATGATGGGGTACTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 90 bp | TTAACTAGAGTATCTTTAATGAACTCCTTCTTCACAATCAGAGATTaGAAACTCGGGCCACAGTTCTGCACGCACATGTCAATGAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTRVSLMNSFFTIRD*KLGPQFCTHMSMSD Trigger: ATCACTCATTGACATGTGCGTGCAGAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAAGAAGGAGTTCATTAAAGATACTCTAGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 ENSMUST00000154599.2 |
||
| CDS CCA 90 bp | CGATGTCTTCATGGTTTTCAGAGCCAGGAGTATTCTCCATCAATATaGCTGTCATCACTTTCACATTCATTTTCACCATATCTAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RCLHGFQSQEYSPSI*LSSLSHSFSPYLVH Trigger: GTGAACTAGATATGGTGAAAATGAATGTGAAAGTGATGACAGCCATATTGATGGAGAATACTCCTGGCTCTGAAAACCATGAAGACATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 90 bp | CTTAGGCCTGAAAGCTGGGCGTTCACGGAGTTGAGTGCTCCCTCATaGGGCGTAGGCACTGGCACGATGGGGCTTAGGTCGAGGAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: LRPESWAFTELSAPS*GVGTGTMGLRSRRS Trigger: CGATCTCCTCGACCTAAGCCCCATCGTGCCAGTGCCTACGCCCAATGAGGGAGCACTCAACTCCGTGAACGCCCAGCTTTCAGGCCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 72 bp | GGTCGAGGAGATCGCAGGAAGGAGCAGAGGGCTCGCTaGAAGTACGGGTTGCTTCTGTCCGGTTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRGDRRKEQRAR*KYGLLLSGSSS Trigger: AGAAGAGGAACCGGACAGAAGCAACCCGTACTTCCAGCGAGCCCTCTGCTCCTTCCTGCGATCTCCTCGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS TCA 72 bp | GCAGTGGGGACAGATGTCGGTCGATTTGGTGAGATCTaGCCAGCCTCCTGCCTTGTCTCAGGCTCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AVGTDVGRFGEI*PASCLVSGSPS Trigger: GGATGGAGAGCCTGAGACAAGGCAGGAGGCTGGTCAGATCTCACCAAATCGACCGACATCTGTCCCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS TCA 72 bp | TGCAGGTGCAGTGGGGACAGATGTCGGTCGATTTGGTaGGATCTGACCAGCCTCCTGCCTTGTCTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CRCSGDRCRSIW*DLTSLLPCLRL Trigger: GAGCCTGAGACAAGGCAGGAGGCTGGTCAGATCTCACCAAATCGACCGACATCTGTCCCCACTGCACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
||
| CDS CCA 72 bp | ACAGGGCTCAGAGAGCTGACACTTAGGCCTGAAAGCTaGGCGTTCACGGAGTTGAGTGCTCCCTCATTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGLRELTLRPES*AFTELSAPSLG Trigger: GCCCAATGAGGGAGCACTCAACTCCGTGAACGCCCAGCTTTCAGGCCTAAGTGTCAGCTCTCTGAGCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 72 bp | CGCAGGAAGGAGCAGAGGGCTCGCTGGAAGTACGGGTaGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRKEQRARWKYG*LLSGSSSVPKA Trigger: GGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCGTACTTCCAGCGAGCCCTCTGCTCCTTCCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 72 bp | GCTGGAGATCGCCGTCTTTTAGCACTGGATGACTGCTaGGCAAGGGTGGCAGCCTCTGGTTTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGDRRLLALDDC*ARVAASGLLLL Trigger: CAGCAGCAGCAAACCAGAGGCTGCCACCCTTGCCAAGCAGTCATCCAGTGCTAAAAGACGGCGATCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS GCA 72 bp | GCAGGAAGGAGCAGAGGGCTCGCTGGAAGTACGGGTTaGTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRSRGLAGSTG*FCPVPLLFQKP Trigger: AGGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCGTACTTCCAGCGAGCCCTCTGCTCCTTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS GCA 72 bp | GGCCCGTCCTGTGTGGTGTTAATTATGTCACAGATGTaGAGGAACTGGCCCCAGTCTTCAGTCAGAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPSCVVLIMSQM*RNWPQSSVRTP Trigger: TGGAGTTCTGACTGAAGACTGGGGCCAGTTCCTGCACATCTGTGACATAATTAACACCACACAGGACGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 ENSMUST00000154599.2 |
||
| CDS CAA 90 bp | TTTTCACCATATCTAGTTCACTATGCAGCTTCCCGATCTCCTGCCTaGTCTCAGGCTCTCCATCCGAGGGCGGGAATTGAACCCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSPYLVHYAASRSPA*SQALHPRAGIEPLS Trigger: AGAAAGGGGTTCAATTCCCGCCCTCGGATGGAGAGCCTGAGACAAGGCAGGAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154599.2 |
||
| CDS CCA 72 bp | GTACACTTCCTTCACCTCACTCACATCTACACCTCCTaGGAAGCCCTGGGACCAGGTCTTAATGAAATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VHFLHLTHIYTS*EALGPGLNEIQ Trigger: TTGAATTTCATTAAGACCTGGTCCCAGGGCTTCCCAGGAGGTGTAGATGTGAGTGAGGTGAAGGAAGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000154599.2 |
||
| CDS CCA 72 bp | GAGCTAAGGGATCAAACTCCATTACCTCGTAGTAATTaGGTGGCTGGAGATCGCCGTCTTTTAGCACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ELRDQTPLPRSN*VAGDRRLLALD Trigger: ATCCAGTGCTAAAAGACGGCGATCTCCAGCCACCCAATTACTACGAGGTAATGGAGTTTGATCCCTTAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 90 bp | ACGGGTTGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTTGTaGGTTTCGAGTAAACCTCTCATATCCAAGGACGGCATTATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGCFCPVPLLFQKPL*VSSKPLISKDGIIQ Trigger: CTGAATAATGCCGTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CCA 72 bp | TGTGTGGTGTTAATTATGTCACAGATGTGCAGGAACTaGCCCCAGTCTTCAGTCAGAACTCCAGCAAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CVVLIMSQMCRN*PQSSVRTPAKV Trigger: CACTTTTGCTGGAGTTCTGACTGAAGACTGGGGCCAGTTCCTGCACATCTGTGACATAATTAACACCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 ENSMUST00000154599.2 |
||
| CDS CCA 72 bp | TTCACCTCACTCACATCTACACCTCCTGGGAAGCCCTaGGACCAGGTCTTAATGAAATTCAAGATTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSLTSTPPGKP*DQVLMKFKILF Trigger: GAACAGAATCTTGAATTTCATTAAGACCTGGTCCCAGGGCTTCCCAGGAGGTGTAGATGTGAGTGAGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000154599.2 |
||
| CDS CCA 72 bp | TCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTTGTTaGTTTCGAGTAAACCTCTCATATCCAAGGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRFLFCSKSLC*FRVNLSYPRTA Trigger: TGCCGTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 72 bp | TTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTTGTaGGTTTCGAGTAAACCTCTCATATCCAAGGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCPVPLLFQKPL*VSSKPLISKDG Trigger: GCCGTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 72 bp | GTGAAAATTATCATATGTGTGACTCGAGGCGAGGTTTaGGCTGGTCCTCTGGGGAAACAAGGTGGGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKIIICVTRGEV*AGPLGKQGGYF Trigger: GAAATACCCACCTTGTTTCCCCAGAGGACCAGCCAAAACCTCGCCTCGAGTCACACATATGATAATTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 90 bp | AGTACGGGTTGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTaGTTGGTTTCGAGTAAACCTCTCATATCCAAGGACGGCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: STGCFCPVPLLFQKP*LVSSKPLISKDGII Trigger: AATAATGCCGTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCAACCCGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS CAA 72 bp | TGCTTCTGTCCGGTTCCTCTTCTGTTCCAAAAGCCTTaGTTGGTTTCGAGTAAACCTCTCATATCCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CFCPVPLLFQKP*LVSSKPLISKD Trigger: GTCCTTGGATATGAGAGGTTTACTCGAAACCAACAAAGGCTTTTGGAACAGAAGAGGAACCGGACAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
||
| CDS GCA 72 bp | ACTTTCACATTCATTTTCACCATATCTAGTTCACTATaGAGCTTCCCGATCTCCTGCCTTGTCTCAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TFTFIFTISSSL*SFPISCLVSGS Trigger: AGAGCCTGAGACAAGGCAGGAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAATGAATGTGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154599.2 |
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| CDS CCA 72 bp | GTATCTTTAATGAACTCCTTCTTCACAATCAGAGATTaGAAACTCGGGCCACAGTTCTGCACGCACATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSLMNSFFTIRD*KLGPQFCTHMS Trigger: TGACATGTGCGTGCAGAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAAGAAGGAGTTCATTAAAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 ENSMUST00000154599.2 |
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| CDS CAA 72 bp | AGTATCTTTAATGAACTCCTTCTTCACAATCAGAGATaGGAAACTCGGGCCACAGTTCTGCACGCACATGTC | + |
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Preference number: 6 (lower is better) Translates to: SIFNELLLHNQR*ETRATVLHAHV Trigger: GACATGTGCGTGCAGAACTGTGGCCCGAGTTTCCAATCTCTGATTGTGAAGAAGGAGTTCATTAAAGATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107869.9 ENSMUST00000154599.2 |
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| CDS TCA 72 bp | TCTATATCTTCTGATGCTAGTAAATCCCTCTGTGGCTaGAGACTGGGATACAAGTTGTTTGTTATAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SISSDASKSLCG*RLGYKLFVITG Trigger: CCCTGTTATAACAAACAACTTGTATCCCAGTCTTCAGCCACAGAGGGATTTACTAGCATCAGAAGATATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020849.9 ENSMUST00000107867.8 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| CDS GCA 72 bp | ACTTTCACATTCATTTTCACCATATCTAGTTCACTATaGAGCTTCCCGATCTGTTCTGGGACTAAGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: TFTFIFTISSSL*SFPICSGTKEI Trigger: TATTTCCTTAGTCCCAGAACAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAATGAATGTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 |
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| CDS CCA 72 bp | CATGGTTTTCAGAGCCAGGAGTATTCTCCATCAATATaGCTGTCATCACTTTCACATTCATTTTCACCATAT | + |
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Preference number: 6 (lower is better) Translates to: HGFQSQEYSPSI*LSSLSHSFSPY Trigger: ATATGGTGAAAATGAATGTGAAAGTGATGACAGCCATATTGATGGAGAATACTCCTGGCTCTGAAAACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020849.9 ENSMUST00000107868.8 ENSMUST00000107869.9 |
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| CDS GCA 72 bp | ACTTTCACATTCATTTTCACCATATCTAGTTCACTATaGAGCTTCCCGATCTTAATGAAATTCAAGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: TFTFIFTISSSL*SFPILMKFKIL Trigger: CAGAATCTTGAATTTCATTAAGATCGGGAAGCTGCATAGTGAACTAGATATGGTGAAAATGAATGTGAAAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107869.9 |
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