Pregenerated sensors for TOM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042870Ensembl transcript IDs: ENSMUST00000078847.13, ENSMUST00000165630.3, ENSMUST00000212299.2, ENSMUST00000212388.2, ENSMUST00000212564.2, ENSMUST00000212651.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGAGCCCTGCTGGAGGTACAGAGCAAGGATAGGGGAAAGGCAGTaGAGGAACTGGGGAGCTCTGGGTACCCAGAATCCTCGAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VEPCWRYRARIGERQ*RNWGALGTQNPRGL Trigger: GAGACCTCGAGGATTCTGGGTACCCAGAGCTCCCCAGTTCCTCCACTGCCTTTCCCCTATCCTTGCTCTGTACCTCCAGCAGGGCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR CCA 90 bp | CACCTCTCCCTGTACCTGAGGACCAATCAACAGGTGAGCCCCAGGTaGGTGGAGCCCTGCTGGAGGTACAGAGCAAGGATAGGGGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: HLSLYLRTNQQVSPR*VEPCWRYRARIGER Trigger: CCTTTCCCCTATCCTTGCTCTGTACCTCCAGCAGGGCTCCACCCACCTGGGGCTCACCTGTTGATTGGTCCTCAGGTACAGGGAGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR GCA 90 bp | AGGTCTCATCTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTaGAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: RSHLDTWAVRCFLDG*SFVPGQWAAQQGPP Trigger: TGGTGGCCCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR TCA 90 bp | CCTTCGCAGGTCCTCGTAGACAGCAACAACACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTCAACAC | + |
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Preference number: 1 (lower is better) Translates to: PSQVLVDSNNTCQIR*AAERVSPGLDEVQH Trigger: GTGTTGAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGTGTTGTTGCTGTCTACGAGGACCTGCGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR TCA 90 bp | CTGGGTACCCAGAATCCTCGAGGTCTCATCTTGACACCTGGGCAGTaGGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LGTQNPRGLILTPGQ*DVSSMGAVSYQDSG Trigger: CCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGACCTCGAGGATTCTGGGTACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR TCA 90 bp | GGAACTGGGGAGCTCTGGGTACCCAGAATCCTCGAGGTCTCATCTTaGCACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGT | + |
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Preference number: 1 (lower is better) Translates to: GTGELWVPRILEVSS*HLGSEMFPRWVQFR Trigger: ACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGACCTCGAGGATTCTGGGTACCCAGAGCTCCCCAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR CCA 90 bp | TGCTGGAGGTACAGAGCAAGGATAGGGGAAAGGCAGTGGAGGAACTaGGGAGCTCTGGGTACCCAGAATCCTCGAGGTCTCATCTTGACA | + |
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Preference number: 1 (lower is better) Translates to: CWRYRARIGERQWRN*GALGTQNPRGLILT Trigger: TGTCAAGATGAGACCTCGAGGATTCTGGGTACCCAGAGCTCCCCAGTTCCTCCACTGCCTTTCCCCTATCCTTGCTCTGTACCTCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR CCA 90 bp | TCGGGCCCCACTCTGCAGGGGGATGGGATAGGCAAGGCTGTGGTAATGTCTCCTGAGAGTGTCAGGCCCTaGGCTGCAGGATGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: SGPTLQGDGIGKAVVMSPESVRP*AAGCQT Trigger: GGTCTGGCATCCTGCAGCCCAGGGCCTGACACTCTC...AGGAGACATTACCACAGCCTTGCCTATCCCATCCCCCTGCAGAGTGGGGCCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGTGTCAGGCCCTGGGCTaGAGGATGCCAGACCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QWRADLFLQLTPLLPRLWCQALG*RMPDPA Trigger: TGCAGGGTCTGGCATCCTGCAGCCCAGGGCCTGACA...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| 3UTR-3UTR GCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGTGTCAGGCCCTGGGCTaGAGGATGCCAGACCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LIPSVDPLAAQALGEEKRCQALG*RMPDPA Trigger: TGCAGGGTCTGGCATCCTGCAGCCCAGGGCCTGACA...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGAGAGTGTCAGGCCCTaGGCTGCAGGATGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: LIPSVDPLAAQALGEEKRESVRP*AAGCQT Trigger: GGTCTGGCATCCTGCAGCCCAGGGCCTGACACTCTC...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| 3UTR CAA 90 bp | CAGGACCAGCCAGGATTCCAGTGGAGGGCTGACTTATTCCTTCAGTaGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: QDQPGFQWRADLFLQ*TPLLPRLWEKRSGV Trigger: TACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTGGTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR TCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGACTTATTCCTTCAGTTaGCCCCCTTGCTGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQTYSFS*PPCCPG Trigger: GCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGT...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTCATGGGAAATTCTAGGCCCTTCCTTCGCAGGTCCTCGTAGACAGCAACAACAGCCCAGGACTGGATaGGGTTCAACACCTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QSWEILGPSFAGPRRQQQQPRTG*GSTPCH Trigger: ATGACAAGGTGTTGAACCTCATCCAGTCCTGGGCTG...TTGTTGCTGTCTACGAGGACCTGCGAAGGAAGGGCCTAGAATTTCCCATGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR-3UTR CCA 90 bp | GAACGCGTCAGCCCAGGACTGGATGAGGTTCAACACCTTGTCATGCACAATGGTTGTTCTTCGGCAGGATaGTCCTCACCAGCACATTCT | + |
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Preference number: 2 (lower is better) Translates to: ERVSPGLDEVQHLVMHNGCSSAG*SSPAHS Trigger: AGAATGTGCTGGTGAGGACCATCCTGCCGAAGAACA...ACCATTGTGCATGACAAGGTGTTGAACCTCATCCAGTCCTGGGCTGACGCGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTCAGTCATGGGAAATTCTAGGCCCTTCCTTCGCAGGTCCTCGTAGACAGCCTTGTCATGCACAATaGTGGGTGGATTGTTCTTCG | + |
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Preference number: 2 (lower is better) Translates to: PGQSWEILGPSFAGPRRQPCHAQ*WVDCSS Trigger: CGAAGAACAATCCACCCACCATTGTGCATGACAAGG...CTGTCTACGAGGACCTGCGAAGGAAGGGCCTAGAATTTCCCATGACTGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR-3UTR CAA 90 bp | TCGTACCAGGACAGTGGGCAGCTCAGCAGGGGCCACCATAGCCCATCCCAAAAGTCCTATCAGGTCAGCTaGTCTGGGGCCCCAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SYQDSGQLSRGHHSPSQKSYQVS*SGAPGL Trigger: GAGACCTGGGGCCCCAGACAAGCTGACCTGATAGGA...CTTTTGGGATGGGCTATGGTGGCCCCTGCTGAGCTGCCCACTGTCCTGGTACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGCTTCAGTTGACCCCCTaGCTGCCCAGGCTCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: MFPRWVQFRTRTVGSSAGLQLTP*LPRLWE Trigger: CTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAG...CCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR CAA 90 bp | GATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGACTTATTCCTTCAGTaGACCCCCTTGCTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: DVSSMGAVSYQDSGQLSRDLFLQ*TPLLPR Trigger: CCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTC...CCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGTGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTCAACACCTTGACAATGGTGGGTGGATaGTTCTTCGGCAGGATGGTC | + |
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Preference number: 3 (lower is better) Translates to: SGELRNASAQDWMRFNTLTMVGG*FFGRMV Trigger: GACCATCCTGCCGAAGAACAATCCACCCACCATTGT...CAAGGTGTTGAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR TCA 72 bp | AAGAAGGCAGGACCAGCCAGGATTCCAGTGGAGGGCTaGCTTATTCCTTCAGTTGACCCCCTTGCTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: KKAGPARIPVEG*LIPSVDPLAAQ Trigger: CTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTGGTCCTGCCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR TCA 72 bp | GTCCTCGTAGACAGCAACAACACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGCCCAGGACTGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: VLVDSNNTCQIR*AAERVSPGLDE Trigger: CTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGTGTTGTTGCTGTCTACGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
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| 3UTR GCA 72 bp | CTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTaGAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LDTWAVRCFLDG*SFVPGQWAAQQ Trigger: CTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR TCA 72 bp | GAGCTCTGGGTACCCAGAATCCTCGAGGTCTCATCTTaGCACCTGGGCAGTGAGATGTTTCCTCGATGGGTG | + |
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Preference number: 3 (lower is better) Translates to: ELWVPRILEVSS*HLGSEMFPRWV Trigger: CACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGACCTCGAGGATTCTGGGTACCCAGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR CCA 72 bp | AGGATGGGAAGAAGGCAGGACCAGCCAGGATTCCAGTaGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RMGRRQDQPGFQ*RADLFLQLTPL Trigger: CAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTGGTCCTGCCTTCTTCCCATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| 3UTR TCA 72 bp | CAGAATCCTCGAGGTCTCATCTTGACACCTGGGCAGTaGGATGTTTCCTCGATGGGTGCAGTTTCGTACCAG | + |
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Preference number: 3 (lower is better) Translates to: QNPRGLILTPGQ*DVSSMGAVSYQ Trigger: CTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGACCTCGAGGATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR TCA 90 bp | TCGGGCCCCACTCTGCAGGGGGATGGGATAGGCAAGGCTGTGGTAATGTCTCCTCCGTTGGTCAGCCAGTaGGCTGCCCCGAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGPTLQGDGIGKAVVMSPPLVSQ*AAPSQS Trigger: GCTCTGACTCGGGGCAGCTCACTGGCTGACCAACGG...AGGAGACATTACCACAGCCTTGCCTATCCCATCCCCCTGCAGAGTGGGGCCCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR TCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAACCGTTGGTCAGCCAGTaGGCTGCCCCGAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKPLVSQ*AAPSQS Trigger: GCTCTGACTCGGGGCAGCTCACTGGCTGACCAACGG...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTGGATCCGCTGCTGCATaGCACGGCAGGTGCGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGGSAAA*HGRCGS Trigger: TGAACCGCACCTGCCGTGCCATGCAGCAGCGGATCC...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | TCGGGCCCCACTCTGCAGGGGGATGGGATAGGCAAGGCTGTGGTAATGTCTCCTTTCCAGGAGATGGTCTaGGGGGTCCCTCGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGPTLQGDGIGKAVVMSPFQEMV*GVPRLK Trigger: CTTCAGCCGAGGGACCCCCCAGACCATCTCCTGGAA...AGGAGACATTACCACAGCCTTGCCTATCCCATCCCCCTGCAGAGTGGGGCCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QWRADLFLQLTPLLPRLWAQSSL*REPSVA Trigger: AGCTACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR GCA 90 bp | TCGGGCCCCACTCTGCAGGGGGATGGGATAGGCAAGGCTGTGGTAATGTCTCCTGGTCAGCCAGTGAGCTaGCCCGAGTCAGAGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SGPTLQGDGIGKAVVMSPGQPVS*PESEQT Trigger: TGTTTGCTCTGACTCGGGGCAGCTCACTGGCTGACC...AGGAGACATTACCACAGCCTTGCCTATCCCATCCCCCTGCAGAGTGGGGCCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGGAGTGGGCAGAGGGGTaGCATGCTGGCTCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RADLFLQLTPLLPRLWEKEWAEG*HAGSGL Trigger: GAGACCTGAGCCAGCATGCCACCCCTCTGCCCACTC...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTTCTGCAGGCTCTACCTaGGTGGGCACCAGCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGSAGST*VGTSSV Trigger: GACAGAGCTGGTGCCCACCCAGGTAGAGCCTGCAGA...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGGGATCCGCTGCTGCATaGCACGGCAGGTGCGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RADLFLQLTPLLPRLWEKGSAAA*HGRCGS Trigger: TGAACCGCACCTGCCGTGCCATGCAGCAGCGGATCC...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGGAGTGGGCAGAGGGGTaGCATGCTGGCTCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQEWAEG*HAGSGL Trigger: GAGACCTGAGCCAGCATGCCACCCCTCTGCCCACTC...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAAGGAGAACAGCTGGAGTaGGCAGAGGGGTGGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKGEQLE*AEGWHA Trigger: AGCATGCCACCCCTCTGCCCACTCCAGCTGTTCTCC...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGTCTGCAGGCTCTACCTaGGTGGGCACCAGCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RADLFLQLTPLLPRLWEKSAGST*VGTSSV Trigger: GACAGAGCTGGTGCCCACCCAGGTAGAGCCTGCAGA...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAATTCCAGGAGATGGTCTaGGGGGTCCCTCGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKFQEMV*GVPRLK Trigger: CTTCAGCCGAGGGACCCCCCAGACCATCTCCTGGAA...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR TCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTATCTTCCAGGTGACCTaGGGTCTCCAGAGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGIFQVT*GLQRLQ Trigger: CTGCAGTCTCTGGAGACCTCAGGTCACCTGGAAGAT...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR TCA 90 bp | TTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGGCCAAAGTCATCTTCCAGGTaGCCTGAGGTCTCCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: FLDGCSFVPGQWAAQQGPKSSSR*PEVSRD Trigger: GTCTCTGGAGACCTCAGGTCACCTGGAAGATGACTT...TGGCCCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR GCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAATCAAATCAGGTGAGCTaGGGAACGCGTCAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKSNQVS*GTRQPR Trigger: CCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGA...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR GCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGAGGTTGTTTGTGGCTaGGGGGTCAGGACCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKREVVCG*GVRTHV Trigger: GACATGGGTCCTGACCCCGCAGCCACAAACAACCTC...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR GCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTGAGGTCTCCAGAGACTaGAGGCCAGCTCTCACACTT | + |
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Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGEVSRD*RPALTL Trigger: AAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGACCTC...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGTCTGGGGTGTGTGGATaGGCGACAGCATGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRSGVCG*ATACPG Trigger: ACCTGGACATGCTGTCGCCCATCCACACACCCCAGA...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | ATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGTCTGGGGTGTGTGGATaGGCGACAGCATGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MFPRWVQFRTRTVGSSAGSGVCG*ATACPG Trigger: ACCTGGACATGCTGTCGCCCATCCACACACCCCAGA...CCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGTTCTCTGGGGTGTGTaGATGGGCGACAGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRVLWGV*MGDSMS Trigger: GGACATGCTGTCGCCCATCCACACACCCCAGAGAAC...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGGTTCTCTGGGGTGTGTaGATGGGCGACAGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MFPRWVQFRTRTVGSSAGVLWGV*MGDSMS Trigger: GGACATGCTGTCGCCCATCCACACACCCCAGAGAAC...CCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGTTGACCCCTTTCCGTTaGTCAGCCAGTGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRLTPFR*SASELP Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGGGGTCAA...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| 3UTR CAA 72 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTaGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QWRADLFLQLTP*LPRLWEKRSGV Trigger: TACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAACACAGATTTCCATGTTaGGGGCCCAGTCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKHRFPC*GPSPRS Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAAATCTGTG...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTCAGCCCAGGACTGGATaGGGTTCAACACCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGQPRTG*GSTPCH Trigger: ATGACAAGGTGTTGAACCTCATCCAGTCCTGGGCTG...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRTCQIR*AAERVS Trigger: GCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGT...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGAAGTCATCTTCCAGGTaGCCTGAGGTCTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QWRADLFLQLTPLLPRLWKSSSR*PEVSRD Trigger: GTCTCTGGAGACCTCAGGTCACCTGGAAGATGACTT...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | AACGCGTCAGCCCAGGACTGGATGAGGTTCAACACCTTGTCATGCACAATGGTGGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NASAQDWMRFNTLSCTMVAQSSL*REPSVA Trigger: AGCTACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...CACCATTGTGCATGACAAGGTGTTGAACCTCATCCAGTCCTGGGCTGACGCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGATTCCAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGTCAAATCAGGTGAGCTaGGGAACGCGTCAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPGFQWRADLFLQLTPLLSNQVS*GTRQPR Trigger: CCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGA...CAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAGGTCAGCCAGTGAGCTaGCCCGAGTCAGAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRGQPVS*PESEQT Trigger: TGTTTGCTCTGACTCGGGGCAGCTCACTGGCTGACC...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGTTGGCCACCAGTACATaGAAGCGGTGCCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRLATST*KRCPQF Trigger: GAACTGTGGGCACCGCTTCCATGTACTGGTGGCCAA...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGAGGCCTTAGCAGTCTaGCCTGTTCGGAAGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKREALAV*PVRKRS Trigger: TGAACGCTTCCGAACAGGCCAGACTGCTAAGGCCTC...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGGAGGCCTTAGCAGTCTaGCCTGTTCGGAAGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MFPRWVQFRTRTVGSSAGEALAV*PVRKRS Trigger: TGAACGCTTCCGAACAGGCCAGACTGCTAAGGCCTC...CCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGATGAGAGGTTGTTTGTaGCTGCGGGGTCAGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRMRGCL*LRGQDP Trigger: TGGGTCCTGACCCCGCAGCCACAAACAACCTCTCAT...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATCATCGTCCTTCTCCTaGGTCTTCCTCCGAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRSSSFS*VFLRGA Trigger: AGCCCCTCGGAGGAAGACCCAGGAGAAGGACGATGA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| 3UTR CAA 72 bp | CCAGGATTCCAGTGGAGGGCTGACTTATTCCTTCAGTaGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGFQWRADLFLQ*TPLLPRLWEKR Trigger: TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAACAGCCCAGGACTGGATaGGGTTCAACACCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKQPRTG*GSTPCH Trigger: ATGACAAGGTGTTGAACCTCATCCAGTCCTGGGCTG...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAATCCTGCCAGTTGAGATaGGAGGTTGTTTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKSCQLR*EVVCGC Trigger: GCAGCCACAAACAACCTCTCATCTCAACTGGCAGGA...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGATCTTCCAGGTGACCTaGGGTCTCCAGAGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQIFQVT*GLQRLQ Trigger: CTGCAGTCTCTGGAGACCTCAGGTCACCTGGAAGAT...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGACCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRPSPAH*AASQSA Trigger: AGCAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTTGTCCAGGTCAGTCATaGGAAATTCTAGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGCPGQS*EILGPS Trigger: GGAAGGGCCTAGAATTTCCCATGACTGACCTGGACA...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTTTGAATACAGTTCTCTaGGGTGTGTGGATGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGLNTVL*GVWMGD Trigger: GTCGCCCATCCACACACCCCAGAGAACTGTATTCAA...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGATGAGAGGTTGTTTGTaGCTGCGGGGTCAGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQMRGCL*LRGQDP Trigger: TGGGTCCTGACCCCGCAGCCACAAACAACCTCTCAT...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGCAGCTCTCACACTTCTaGAGCCAAGGTCTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QWRADLFLQLTPLLPRLWQLSHF*SQGLEE Trigger: CTCTTCAAGACCTTGGCTCCAGAAGTGTGAGAGCTG...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078847.13 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATCCTGCCAGTTGAGATaGGAGGTTGTTTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRSCQLR*EVVCGC Trigger: GCAGCCACAAACAACCTCTCATCTCAACTGGCAGGA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGAATTCGCTTCTTCACTaGTCGGAAGGCATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QWRADLFLQLTPLLPRLWNSLLH*SEGIFG Trigger: CCCAAAGATGCCTTCCGAGCAGTGAAGAAGCGAATT...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | TGCACAATGGTGGGTGGATTGTTCTTCGGCAGGATGGTCCTCACCAGCACATTCTTGGCCACCAGTACATaGAAGCGGTGCCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTMVGGLFFGRMVLTSTFLATST*KRCPQF Trigger: GAACTGTGGGCACCGCTTCCATGTACTGGTGGCCAA...GAATGTGCTGGTGAGGACCATCCTGCCGAAGAACAATCCACCCACCATTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGCTACAAAGTCCTGGTTaGCCACCAGTACATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRLQSPG*PPVHGS Trigger: GCTTCCATGTACTGGTGGCCAACCAGGACTTTGTAG...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAACACGCTGACTGGTGTTaGAACTCACAGAGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKHADWC*NSQSSV Trigger: GACAGAACTCTGTGAGTTCCAACACCAGTCAGCGTG...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGCAGCCAGGCCATCTGTaGTTTGGGGAGCTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRQPGHL*FGELHI Trigger: AATATGAAGCTCCCCAAACCACAGATGGCCTGGCTG...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAACAGCCAGGCCATCTGTaGTTTGGGGAGCTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKQPGHL*FGELHI Trigger: AATATGAAGCTCCCCAAACCACAGATGGCCTGGCTG...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGCAGCTCTCACACTTCTaGAGCCAAGGTTCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RADLFLQLTPLLPRLWEKQLSHF*SQGSFL Trigger: CAGGAATGAACCTTGGCTCCAGAAGTGTGAGAGCTG...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCATGGGAAATTCTAGGCCCTTCCTTCGCAGGTCCTCGTAGACAGCAACAACACAGATTTCCATGTTaGGGGCCCAGTCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSWEILGPSFAGPRRQQQHRFPC*GPSPRS Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAAATCTGTG...TTGTTGCTGTCTACGAGGACCTGCGAAGGAAGGGCCTAGAATTTCCCATGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212564.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTTCTTCAAGTAGGAAGTaGTTACTGAGGCTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSVDPLAAQALGEEKRGSSSRK*LLRLSS Trigger: ACTGCTCAGCCTCAGTAATCACTTCCTACTTGAAGA...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078847.13 |
||
| CDS-3UTR GCA 90 bp | GATGGGATAGGCAAGGCTGTGGTAATGTCTCCTCTATTGCCTAGACTGTTAGTGGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGIGKAVVMSPLLPRLLVAQSSL*REPSVA Trigger: AGCTACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...CACTAACAGTCTAGGCAATAGAGGAGACATTACCACAGCCTTGCCTATCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGAATTCGCTTCTTCACTaGTCGGAAGGCATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRNSLLH*SEGIFG Trigger: CCCAAAGATGCCTTCCGAGCAGTGAAGAAGCGAATT...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATGTTCTTCGGCAGGATaGTCCTCACCAGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRCSSAG*SSPAHS Trigger: AGAATGTGCTGGTGAGGACCATCCTGCCGAAGAACA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGTTCTTCGGCAGGATaGTCCTCACCAGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQCSSAG*SSPAHS Trigger: AGAATGTGCTGGTGAGGACCATCCTGCCGAAGAACA...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGCCTTGTCATGCACAATaGTGGGTGGATTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRPCHAQ*WVDCSS Trigger: CGAAGAACAATCCACCCACCATTGTGCATGACAAGG...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATGTCCAGGTCAGTCATaGGAAATTCTAGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRCPGQS*EILGPS Trigger: GGAAGGGCCTAGAATTTCCCATGACTGACCTGGACA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GATGGGATAGGCAAGGCTGTGGTAATGTCTCCTCTATTGCCTAGACTGTTAGTGGGAGAACAGCTGGAGTaGGCAGAGGGGTGGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGIGKAVVMSPLLPRLLVGEQLE*AEGWHA Trigger: AGCATGCCACCCCTCTGCCCACTCCAGCTGTTCTCC...CACTAACAGTCTAGGCAATAGAGGAGACATTACCACAGCCTTGCCTATCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTATTGACCCCTTTCCGTTaGTCAGCCAGTGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLDTWAVRCFLDGCSFVLTPFR*SASELP Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGGGGTCAA...TACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGAGGCCATCTGTGGTTTaGGGAGCTTCATATTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LIPSVDPLAAQALGEEKRRPSVV*GASYLT Trigger: GGTCAAATATGAAGCTCCCCAAACCACAGATGGCCT...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATGTTCCCCACATCTGTaGACAGCCACTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRCSPHL*TATAQC Trigger: ACATTGAGCAGTGGCTGTCCACAGATGTGGGGAACA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTATCATCGTCCTTCTCCTaGGTCTTCCTCCGAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDTWAVRCFLDGCSFVSSSFS*VFLRGA Trigger: AGCCCCTCGGAGGAAGACCCAGGAGAAGGACGATGA...TACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | GATGGGATAGGCAAGGCTGTGGTAATGTCTCCTCTATTGCCTAGACTGTTAGTGACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGIGKAVVMSPLLPRLLVTCQIR*AAERVS Trigger: GCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGT...CACTAACAGTCTAGGCAATAGAGGAGACATTACCACAGCCTTGCCTATCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTAACAAAATTCATTCCTGCCAGTTaGGATGAGAGGTTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLTPLLPRLWEKRSGVTKFIPAS*DERLFV Trigger: CACAAACAACCTCTCATCTCAACTGGCAGGAATGAA...TTTTGTTACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGTTCAACACCTTGTCATaGACAATGGTGGGTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RADLFLQLTPLLPRLWEKFNTLS*TMVGGL Trigger: CAATCCACCCACCATTGTGCATGACAAGGTGTTGAA...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | TCTCATCTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTAGAGGTCTCCAGAGACTaGAGGCCAGCTCTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDTWAVRCFLDGCSFVEVSRD*RPALTL Trigger: AAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGACCTC...TACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QWRADLFLQLTPLLPRLWASMTS*KFLFPI Trigger: TATGGGGAATAAGAATTTCCATGAGGTCATGCTGGC...CCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGGAATATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGCACAGATTTCCATGTTaGGGGCCCAGTCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGISQKQPYTRSIRSYQHRFPC*GPSPRS Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAAATCTGTG...CTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATATTCCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR TCA 90 bp | GACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTTCATTCCTGCCAGTTaGGATGAGAGGTTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DTWAVRCFLDGCSFVPGQFIPAS*DERLFV Trigger: CACAAACAACCTCTCATCTCAACTGGCAGGAATGAA...CTGTCCTGGTACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGATTCCAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGTTCAACACCTTGTCATaGACAATGGTGGGTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPGFQWRADLFLQLTPLLFNTLS*TMVGGL Trigger: CAATCCACCCACCATTGTGCATGACAAGGTGTTGAA...CAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGGATTCCAGTGGAGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QPGFQWRADLFLQLTPLLASMTS*KFLFPI Trigger: TATGGGGAATAAGAATTTCCATGAGGTCATGCTGGC...CAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCTCCACTGGAATCCTGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | GATGGGATAGGCAAGGCTGTGGTAATGTCTCCTCTATTGCCTAGACTGTTAGTGTTGAATACAGTTCTCTaGGGTGTGTGGATGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DGIGKAVVMSPLLPRLLVLNTVL*GVWMGD Trigger: GTCGCCCATCCACACACCCCAGAGAACTGTATTCAA...CACTAACAGTCTAGGCAATAGAGGAGACATTACCACAGCCTTGCCTATCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGGAATATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGCCTTGTCATGCACAATaGTGGGTGGATTGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TRGISQKQPYTRSIRSYQPCHAQ*WVDCSS Trigger: CGAAGAACAATCCACCCACCATTGTGCATGACAAGG...CTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATATTCCCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CCA 90 bp | TATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGGTCAGCTTGTCACGCTGACTGGTGTTaGAACTCACAGAGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YHRSSLTPGQLGPIRSACHADWC*NSQSSV Trigger: GACAGAACTCTGTGAGTTCCAACACCAGTCAGCGTG...ACAAGCTGACCTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR CCA 90 bp | TATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGGTCAGCTTGTAGGCCATCTGTGGTTTaGGGAGCTTCATATTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: YHRSSLTPGQLGPIRSACRPSVV*GASYLT Trigger: GGTCAAATATGAAGCTCCCCAAACCACAGATGGCCT...ACAAGCTGACCTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS TCA 90 bp | CTCACTGCGCAGCTTCCCAATCTGCTCAGGAGTCGGTGTGATGGGTaGGTCACCCGGGAGAACAGCTGGAGTGGGCAGAGGGGTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LTAQLPNLLRSRCDG*VTRENSWSGQRGGM Trigger: CATGCCACCCCTCTGCCCACTCCAGCTGTTCTCCCGGGTGACTCACCCATCACACCGACTCCTGAGCAGATTGGGAAGCTGCGCAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212651.2 |
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| CDS TCA 90 bp | CACTGTTCCCCACATCTGTGGACAGCCACTGCTCAATGTCCTCCATaGTGCGGGCCTGAGTGGCTGGGATCGCTCCGGTGCTCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCSPHLWTATAQCPP*CGPEWLGSLRCSAA Trigger: GGCAGCAGAGCACCGGAGCGATCCCAGCCACTCAGGCCCGCATCATGGAGGACATTGAGCAGTGGCTGTCCACAGATGTGGGGAACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS TCA 90 bp | CCTTCGCAGGTCCTCGTAGACAGCAACAACACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGCCCAGGACGTAAGGGCCAGCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSQVLVDSNNTCQIR*AAERVSPGRKGQHD Trigger: GTCATGCTGGCCCTTACGTCCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGTGTTGTTGCTGTCTACGAGGACCTGCGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212299.2 |
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| CDS GCA 90 bp | AGCTGCTCATTGGAGATGCGTGGGATAAGCTCCAGGATCCGCTGCTaGATGGCACGGCAGGTGCGGTTCAGTTCCTGTAGTAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSLEMRGISSRIRC*MARQVRFSSCSSSR Trigger: CCTGGAGCTACTACAGGAACTGAACCGCACCTGCCGTGCCATGCAGCAGCGGATCCTGGAGCTTATCCCACGCATCTCCAATGAGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212388.2 |
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| CDS GCA 90 bp | GTCAGCTGCTCATTGGAGATGCGTGGGATAAGCTCCAGGATCCGCTaGTGCATGGCACGGCAGGTGCGGTTCAGTTCCTGTAGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSCSLEMRGISSRIR*CMARQVRFSSCSSS Trigger: GGAGCTACTACAGGAACTGAACCGCACCTGCCGTGCCATGCAGCAGCGGATCCTGGAGCTTATCCCACGCATCTCCAATGAGCAGCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212388.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGGAGATGAGAGGTTGTTaGTGGCTGCGGGGTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RADLFLQLTPLLPRLWEKEMRGC*WLRGQD Trigger: GTCCTGACCCCGCAGCCACAAACAACCTCTCATCTC...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGAGATGAGAGGTTGTTaGTGGCTGCGGGGTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIPSVDPLAAQALGEEKREMRGC*WLRGQD Trigger: GTCCTGACCCCGCAGCCACAAACAACCTCTCATCTC...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGTCCGTCAGCTGCTCATaGGAGATGCGTGGGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RADLFLQLTPLLPRLWEKSVSCS*EMRGIS Trigger: GCTTATCCCACGCATCTCCAATGAGCAGCTGACGGA...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGTCTGGAGCCAAGGTCTaGAAGAGGGGCCCATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIPSVDPLAAQALGEEKRSGAKV*KRGPFL Trigger: AAGGAATGGGCCCCTCTTCAAGACCTTGGCTCCAGA...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078847.13 |
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| CDS TCA 90 bp | GAGCTGCCCCGAGTCAGAGCAAACATGTCAAAGTCATCTTCCAGGTaGCCTGAGGTCTCCAGAGACTGCAGGCCAGCTCTCACACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELPRVRANMSKSSSR*PEVSRDCRPALTLL Trigger: CAGAAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGACCTCAGGTCACCTGGAAGATGACTTTGACATGTTTGCTCTGACTCGGGGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS CCA 90 bp | TTCTCTGGGGTGTGTGGATGGGCGACAGCATGTCCAGGTCAGTCATaGGAAATTCTAGGCCCTTCCTTCGCAGGTCCTCGTAGACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSGVCGWATACPGQS*EILGPSFAGPRRQQ Trigger: TTGCTGTCTACGAGGACCTGCGAAGGAAGGGCCTAGAATTTCCCATGACTGACCTGGACATGCTGTCGCCCATCCACACACCCCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 |
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| CDS-3UTR CAA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATCCGTCAGCTGCTCATaGGAGATGCGTGGGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRSVSCS*EMRGIS Trigger: GCTTATCCCACGCATCTCCAATGAGCAGCTGACGGA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTTGGCGCAGAAACACGTaGTTGAGGTTGTCGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: IPSVDPLAAQALGEEKRGWRRNT*LRLSLI Trigger: GATCAACGACAACCTCAACAACGTGTTTCTGCGCCA...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | ATGTTTCCTCGATGGGTGCAGTTTCGTACCAGGACAGTGGGCAGCTCAGCAGGGTCTACAAAGTCCTGGTaGGCCACCAGTACATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MFPRWVQFRTRTVGSSAGSTKSW*ATSTWK Trigger: CTTCCATGTACTGGTGGCCAACCAGGACTTTGTAGA...CCCTGCTGAGCTGCCCACTGTCCTGGTACGAAACTGCACCCATCGAGGAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAACAATGGTGGGTGGATaGTTCTTCGGCAGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRTMVGG*FFGRMV Trigger: GACCATCCTGCCGAAGAACAATCCACCCACCATTGT...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTGATGGTGTCTCTGAGTaGAATACAGTTCTCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IPSVDPLAAQALGEEKRGDGVSE*NTVLWG Trigger: ACCCCAGAGAACTGTATTCAACTCAGAGACACCATC...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | AGGGCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGTTGTTGAGGTTGTCGTaGATCATGAGCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RADLFLQLTPLLPRLWEKLLRLS*IMSSSS Trigger: GGAGGAGCTGCTCATGATCAACGACAACCTCAACAA...CTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS CCA 90 bp | GAGGCCTTAGCAGTCTGGCCTGTTCGGAAGCGTTCAAACCGTTCATaGCGCAGAAACACGTTGTTGAGGTTGTCGTTGATCATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EALAVWPVRKRSNRS*RRNTLLRLSLIMSS Trigger: GCTGCTCATGATCAACGACAACCTCAACAACGTGTTTCTGCGCCATGAACGGTTTGAACGCTTCCGAACAGGCCAGACTGCTAAGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212388.2 |
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| CDS CCA 90 bp | CTGCGGAACGCGTCAGCCCAGGACGTAAGGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATAATTCGCTTCTTCACTGCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRNASAQDVRASMTS*KFLFPIIRFFTARK Trigger: CTTCCGAGCAGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCATGAGGTCATGCTGGCCCTTACGTCCTGGGCTGACGCGTTCCGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212299.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATCTACAAAGTCCTGGTaGGCCACCAGTACATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRSTKSW*ATSTWK Trigger: CTTCCATGTACTGGTGGCCAACCAGGACTTTGTAGA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATTGTTGAGGTTGTCGTaGATCATGAGCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRLLRLS*IMSSSS Trigger: GGAGGAGCTGCTCATGATCAACGACAACCTCAACAA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CAA 90 bp | GCTGACTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGATGGCGCAGAAACACGTaGTTGAGGTTGTCGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: ADLFLQLTPLLPRLWEKRWRRNT*LRLSLI Trigger: GATCAACGACAACCTCAACAACGTGTTTCTGCGCCA...TCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CAA 90 bp | CTTATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGAGTCGATCAGCAGCTTaGGCTCGTTCTTCCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LIPSVDPLAAQALGEEKRSRSAA*ARSSRN Trigger: ATTTCTGGAAGAACGAGCCAAAGCTGCTGATCGACT...CCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS TCA 90 bp | TGGTGTTGGAACTCACAGAGTTCTGTCTGGATGGTGTCTCTGAGTTaGATACAGTTCTCTGGGGTGTGTGGATGGGCGACAGCATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WCWNSQSSVWMVSLS*IQFSGVCGWATACP Trigger: TGGACATGCTGTCGCCCATCCACACACCCCAGAGAACTGTATTCAACTCAGAGACACCATCCAGACAGAACTCTGTGAGTTCCAACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 ENSMUST00000212651.2 |
||
| CDS GCA 90 bp | ACATTCTCTACAAAGTCCTGGTTGGCCACCAGTACATGGAAGCGGTaGCCACAGTTCTTAACACATGTTTCCAAGACCGTAAGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFSTKSWLATSTWKR*PQFLTHVSKTVRAS Trigger: GCTGGCCCTTACGGTCTTGGAAACATGTGTTAAGAACTGTGGGCACCGCTTCCATGTACTGGTGGCCAACCAGGACTTTGTAGAGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CAA 90 bp | ATTCCTTCAGTTGACCCCCTTGCTGCCCAGGCTCTGGGAGAAGAGAAGCGGGGTCGTTCTTCCAGAAATTaGTCAAATTCTTCACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSVDPLAAQALGEEKRGRSSRN*SNSSLV Trigger: CACCAGTGAAGAATTTGACAAATTTCTGGAAGAACG...ACCCCGCTTCTCTTCTCCCAGAGCCTGGGCAGCAAGGGGGTCAACTGAAGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
||
| CDS-3UTR CAA 90 bp | TATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGGTCAGCTTGTACAATGGTGGGTGGATaGTTCTTCGGCAGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YHRSSLTPGQLGPIRSACTMVGG*FFGRMV Trigger: GACCATCCTGCCGAAGAACAATCCACCCACCATTGT...ACAAGCTGACCTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS-3UTR CAA 90 bp | TCTCATCTTGACACCTGGGCAGTGAGATGTTTCCTCGATGGGTGCAGTTTCGTAAGTCGATCAGCAGCTTaGGCTCGTTCTTCCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLDTWAVRCFLDGCSFVSRSAA*ARSSRN Trigger: ATTTCTGGAAGAACGAGCCAAAGCTGCTGATCGACT...TACGAAACTGCACCCATCGAGGAAACATCTCACTGCCCAGGTGTCAAGATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
||
| CDS GCA 90 bp | CATGACCTCATGGAAATTCTTATTCCCCATAATTCGCTTCTTCACTaGTCGGAAGGCATCTTTGGGGCCTTCCTCCGTCTCGTTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: HDLMEILIPHNSLLH*SEGIFGAFLRLVDD Trigger: ATCATCAACGAGACGGAGGAAGGCCCCAAAGATGCCTTCCGAGCAGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCATGAGGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 |
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| CDS CCA 90 bp | TTCTTAACACATGTTTCCAAGACCGTAAGGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATAATTCGCTTCTTCACTGCTCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FLTHVSKTVRASMTS*KFLFPIIRFFTARK Trigger: CTTCCGAGCAGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCATGAGGTCATGCTGGCCCTTACGGTCTTGGAAACATGTGTTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS-3UTR CAA 90 bp | TATCACAGAAGCAGCCTTACACCAGGTCAATTAGGTCCTATCAGGTCAGCTTGTCGTTCTTCCAGAAATTaGTCAAATTCTTCACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: YHRSSLTPGQLGPIRSACRSSRN*SNSSLV Trigger: CACCAGTGAAGAATTTGACAAATTTCTGGAAGAACG...ACAAGCTGACCTGATAGGACCTAATTGACCTGGTGTAAGGCTGCTTCTGTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS TCA 72 bp | GACAGCCACTGCTCAATGTCCTCCATGATGCGGGCCTaGGTGGCTGGGATCGCTCCGGTGCTCTGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: DSHCSMSSMMRA*VAGIAPVLCCR Trigger: CCGGCAGCAGAGCACCGGAGCGATCCCAGCCACTCAGGCCCGCATCATGGAGGACATTGAGCAGTGGCTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS TCA 72 bp | CCACATCTGTGGACAGCCACTGCTCAATGTCCTCCATaGTGCGGGCCTGAGTGGCTGGGATCGCTCCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PHLWTATAQCPP*CGPEWLGSLRC Trigger: GCACCGGAGCGATCCCAGCCACTCAGGCCCGCATCATGGAGGACATTGAGCAGTGGCTGTCCACAGATGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS TCA 72 bp | CAGCTTCCCAATCTGCTCAGGAGTCGGTGTGATGGGTaGGTCACCCGGGAGAACAGCTGGAGTGGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QLPNLLRSRCDG*VTRENSWSGQR Trigger: CCTCTGCCCACTCCAGCTGTTCTCCCGGGTGACTCACCCATCACACCGACTCCTGAGCAGATTGGGAAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212651.2 |
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| CDS TCA 72 bp | CACTGCGCAGCTTCCCAATCTGCTCAGGAGTCGGTGTaGTGGGTGAGTCACCCGGGAGAACAGCTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HCAASQSAQESV*WVSHPGEQLEW Trigger: CCACTCCAGCTGTTCTCCCGGGTGACTCACCCATCACACCGACTCCTGAGCAGATTGGGAAGCTGCGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212651.2 |
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| CDS GCA 72 bp | CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTaGTCAGGAGTCGGTGTGATGGGTGAGTCACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: LTISSSLRSFPI*SGVGVMGESPG Trigger: CCCGGGTGACTCACCCATCACACCGACTCCTGAGCAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212651.2 |
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| CDS TCA 72 bp | GTCCTCGTAGACAGCAACAACACCTGTCAAATCAGGTaGGCTGCGGAACGCGTCAGCCCAGGACGTAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VLVDSNNTCQIR*AAERVSPGRKG Trigger: GCCCTTACGTCCTGGGCTGACGCGTTCCGCAGCTCACCTGATTTGACAGGTGTTGTTGCTGTCTACGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212299.2 |
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| CDS CCA 72 bp | GAGGGGTGGCATGCTGGCTCAGGTCTCCACGCTGACTaGTGTTGGAACTCACAGAGTTCTGTCTGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: EGWHAGSGLHAD*CWNSQSSVWMV Trigger: CACCATCCAGACAGAACTCTGTGAGTTCCAACACCAGTCAGCGTGGAGACCTGAGCCAGCATGCCACCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212651.2 |
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| CDS CCA 72 bp | GTGTGTGGATGGGCGACAGCATGTCCAGGTCAGTCATaGGAAATTCTAGGCCCTTCCTTCGCAGGTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: VCGWATACPGQS*EILGPSFAGPR Trigger: ACGAGGACCTGCGAAGGAAGGGCCTAGAATTTCCCATGACTGACCTGGACATGCTGTCGCCCATCCACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 |
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| CDS CCA 72 bp | GTAGCTAGCTCAGCTTCACTGGAGGCCTTAGCAGTCTaGCCTGTTCGGAAGCGTTCAAACCGTTCATGGCGC | + |
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Preference number: 6 (lower is better) Translates to: VASSASLEALAV*PVRKRSNRSWR Trigger: GCGCCATGAACGGTTTGAACGCTTCCGAACAGGCCAGACTGCTAAGGCCTCCAGTGAAGCTGAGCTAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212388.2 |
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| CDS TCA 72 bp | CTGAGGCTGAGCAGTCGATTGTTCATTCCTGCCAGTTaGGATGAGAGGTTGTTTGTGGCTGCGGGGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRLSSRLFIPAS*DERLFVAAGSG Trigger: TCCTGACCCCGCAGCCACAAACAACCTCTCATCTCAACTGGCAGGAATGAACAATCGACTGCTCAGCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078847.13 |
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| CDS CCA 72 bp | GGTGTCTCTGAGTTGAATACAGTTCTCTGGGGTGTGTaGATGGGCGACAGCATGTCCAGGTCAGTCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVSELNTVLWGV*MGDSMSRSVMG Trigger: TCCCATGACTGACCTGGACATGCTGTCGCCCATCCACACACCCCAGAGAACTGTATTCAACTCAGAGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 |
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| CDS CCA 72 bp | GGTTCATTCCTGCCAGTTGAGATGAGAGGTTGTTTGTaGCTGCGGGGTCAGGACCCATGTCAATCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSFLPVEMRGCL*LRGQDPCQSGQ Trigger: CTGACCTGATTGACATGGGTCCTGACCCCGCAGCCACAAACAACCTCTCATCTCAACTGGCAGGAATGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165630.3 |
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| CDS CCA 72 bp | GCAGTCTGGCCTGTTCGGAAGCGTTCAAACCGTTCATaGCGCAGAAACACGTTGTTGAGGTTGTCGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: AVWPVRKRSNRS*RRNTLLRLSLI Trigger: GATCAACGACAACCTCAACAACGTGTTTCTGCGCCATGAACGGTTTGAACGCTTCCGAACAGGCCAGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212388.2 |
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| CDS CCA 72 bp | TGTTCATTCCTGCCAGTTGAGATGAGAGGTTGTTTGTaGCTGCGGGGTCAGGACCCATGTCAATCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: CSFLPVEMRGCL*LRGQDPCQSGQ Trigger: CTGACCTGATTGACATGGGTCCTGACCCCGCAGCCACAAACAACCTCTCATCTCAACTGGCAGGAATGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078847.13 |
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| CDS CAA 90 bp | CCCTCGGCTGAAGGGCTGGCCAGGTTGGGAAGTCGATCAGCAGCTTaGGCTCGTTCTTCCAGAAATTTGTCAAATTCTTCACTGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: PSAEGLARLGSRSAA*ARSSRNLSNSSLVT Trigger: TGTCACCAGTGAAGAATTTGACAAATTTCTGGAAGAACGAGCCAAAGCTGCTGATCGACTTCCCAACCTGGCCAGCCCTTCAGCCGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS CCA 72 bp | CATGCACAATGGTGGGTGGATTGTTCTTCGGCAGGATaGTCCTCACCAGCACATTCTCTACAAAGTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAQWWVDCSSAG*SSPAHSLQSPG Trigger: ACCAGGACTTTGTAGAGAATGTGCTGGTGAGGACCATCCTGCCGAAGAACAATCCACCCACCATTGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS CAA 72 bp | GAACTCACAGAGTTCTGTCTGGATGGTGTCTCTGAGTaGAATACAGTTCTCTGGGGTGTGTGGATGGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: ELTEFCLDGVSE*NTVLWGVWMGD Trigger: GTCGCCCATCCACACACCCCAGAGAACTGTATTCAACTCAGAGACACCATCCAGACAGAACTCTGTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 ENSMUST00000212651.2 |
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| CDS TCA 72 bp | AACTCACAGAGTTCTGTCTGGATGGTGTCTCTGAGTTaGATACAGTTCTCTGGGGTGTGTGGATGGGCGACA | + |
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Preference number: 6 (lower is better) Translates to: NSQSSVWMVSLS*IQFSGVCGWAT Trigger: TGTCGCCCATCCACACACCCCAGAGAACTGTATTCAACTCAGAGACACCATCCAGACAGAACTCTGTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 ENSMUST00000212651.2 |
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| CDS TCA 72 bp | GTTGGAACTCACAGAGTTCTGTCTGGATGGTGTCTCTaGGTTGAATACAGTTCTCTGGGGTGTGTGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: VGTHRVLSGWCL*VEYSSLGCVDG Trigger: CCCATCCACACACCCCAGAGAACTGTATTCAACTCAGAGACACCATCCAGACAGAACTCTGTGAGTTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 ENSMUST00000212651.2 |
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| CDS CCA 72 bp | GCGTCAGCCCAGGACGTAAGGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATAATTCGCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: ASAQDVRASMTS*KFLFPIIRFFT Trigger: AGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCATGAGGTCATGCTGGCCCTTACGTCCTGGGCTGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212299.2 |
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| CDS GCA 72 bp | ATGGAAATTCTTATTCCCCATAATTCGCTTCTTCACTaGTCGGAAGGCATCTTTGGGGCCTTCCTCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: MEILIPHNSLLH*SEGIFGAFLRL Trigger: GAGACGGAGGAAGGCCCCAAAGATGCCTTCCGAGCAGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 ENSMUST00000212299.2 |
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| CDS CAA 72 bp | GAAGGGCTGGCCAGGTTGGGAAGTCGATCAGCAGCTTaGGCTCGTTCTTCCAGAAATTTGTCAAATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EGLARLGSRSAA*ARSSRNLSNSS Trigger: TGAAGAATTTGACAAATTTCTGGAAGAACGAGCCAAAGCTGCTGATCGACTTCCCAACCTGGCCAGCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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| CDS CCA 72 bp | CATGTTTCCAAGACCGTAAGGGCCAGCATGACCTCATaGAAATTCTTATTCCCCATAATTCGCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: HVSKTVRASMTS*KFLFPIIRFFT Trigger: AGTGAAGAAGCGAATTATGGGGAATAAGAATTTCCATGAGGTCATGCTGGCCCTTACGGTCTTGGAAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078847.13 ENSMUST00000165630.3 |
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