Pregenerated sensors for TOLLIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025139Ensembl transcript IDs: ENSMUST00000001950.12, ENSMUST00000055819.13, ENSMUST00000130439.3, ENSMUST00000151890.3
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTGGCAAGAGCAGCAATTACACCCAGTGAGAGCCTGGTCCCCATaGAGAAGCCTGTCTGACTCGGCTGTGGCCTCTGCCTCTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: TWQEQQLHPVRAWSP*RSLSDSAVASASEL Trigger: GAGCTCAGAGGCAGAGGCCACAGCCGAGTCAGACAGGCTTCTGCATGGGGACCAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR CCA 90 bp | TTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGAGCCCTGGGTaGACAAGTCCAAGGGTCAGTGGTGTGAAGCCAAGGGCCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: FHWNLVGMVTLGSPG*TSPRVSGVKPRATG Trigger: GCCTGTGGCCCTTGGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATCCCCACAAGATTCCAATGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR CCA 90 bp | GGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGAGCCCTaGGTGGACAAGTCCAAGGGTCAGTGGTGTGAAGCCAAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GLSLESCGDGDPGEP*VDKSKGQWCEAKGH Trigger: GTGGCCCTTGGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR CCA 90 bp | CAACCTCCAGACAGTGTACCAGATGATACCAGTGTCTGTAAAGGGTaGCCTGGGAGGGCGAGGGCAGAGCCCAGTCGCACAACACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: QPPDSVPDDTSVCKG*PGRARAEPSRTTLL Trigger: CAGAAGTGTTGTGCGACTGGGCTCTGCCCTCGCCCTCCCAGGCCACCCTTTACAGACACTGGTATCATCTGGTACACTGTCTGGAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | TGCGGATGCACACAGCCGCCACACCTGAGACCTAGAGACAGGTACTaGGTGAGGTTCCTGCTCTGCAGTGTCTGCAGTCTGCTGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: CGCTQPPHLRPRDRY*VRFLLCSVCSLLVT Trigger: TGTTACCAGCAGACTGCAGACACTGCAGAGCAGGAACCTCACTCAGTACCTGTCTCTAGGTCTCAGGTGTGGCGGCTGTGTGCATCCGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | GATGCTGGTACTAAACAAGAGGATGTGGAAAGCAGCCTCCAGCAGTaGGGGCTAATGTGGGGCCTGGCCAACCAAGCACCAGGTCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: DAGTKQEDVESSLQQ*GLMWGLANQAPGLD Trigger: ATCCAGACCTGGTGCTTGGTTGGCCAGGCCCCACATTAGCCCTCACTGCTGGAGGCTGCTTTCCACATCCTCTTGTTTAGTACCAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR CCA 90 bp | ACAGTGGCAGATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATaGCTGGGAAGCATATCTCACTGGCCAGGACTAGCTGAGGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: TVADKLDRRLETHWI*LGSISHWPGLAEGP Trigger: GGGCCCCTCAGCTAGTCCTGGCCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATCTGCCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR TCA 90 bp | GCACAACACTTCTGTCATCGGGTAGGCATCACTCACATGGTGAGATaGAAGCCTCTGGCCATGTCAGCCCACAAGCGTGCAGCAGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: AQHFCHRVGITHMVR*KPLAMSAHKRAAGY Trigger: GTAACCTGCTGCACGCTTGTGGGCTGACATGGCCAGAGGCTTTCATCTCACCATGTGAGTGATGCCTACCCGATGACAGAAGTGTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR GCA 90 bp | AGGAGGTTCTGCCTGCCTGACTCATCCACCCTGCAAGAGGGCATCTaGTTACCAAGCACAAGGCCGATCAACAGTCTAGAATGGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RRFCLPDSSTLQEGI*LPSTRPINSLEWRL Trigger: AAGCCTCCATTCTAGACTGTTGATCGGCCTTGTGCTTGGTAAGCAGATGCCCTCTTGCAGGGTGGATGAGTCAGGCAGGCAGAACCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR GCA 90 bp | CTTCCTCATTTAAGCAGTCGTAAGTTAGTGAACGCTGCCTCTGAGTaGTGTGGGACTGCTCAGGGGCTGGCAGCAAATCGTGATGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LPHLSSRKLVNAASE*CGTAQGLAANRDAS Trigger: GGAAGCATCACGATTTGCTGCCAGCCCCTGAGCAGTCCCACAGCACTCAGAGGCAGCGTTCACTAACTTACGACTGCTTAAATGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | GTGCACATGAACTCAGTGCACCCTCAACAACCATCCCAGCTGGACTaGGTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: VHMNSVHPQQPSQLD*VTPCHPSINSEGCC Trigger: ACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTACTCAGTCCAGCTGGGATGGTTGTTGAGGGTGCACTGAGTTCATGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR GCA 90 bp | TCACATGGTGAGATGAAAGCCTCTGGCCATGTCAGCCCACAAGCGTaGAGCAGGTTACAACTTCAGCCAACCAACATGTCCAGAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SHGEMKASGHVSPQA*SRLQLQPTNMSREE Trigger: TTCTTCTCTGGACATGTTGGTTGGCTGAAGTTGTAACCTGCTGCACGCTTGTGGGCTGACATGGCCAGAGGCTTTCATCTCACCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | GGTGTGTGTGTGAGTACCAGAATGTTCTTGCTAGTGTTACAGTCATaGGGAGGAAGGAAGGATGCTGCTCAGCCTGGAGAAAGCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: GVCVSTRMFLLVLQS*GGRKDAAQPGESWI Trigger: GATCCAGCTTTCTCCAGGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATTCTGGTACTCACACACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR CCA 90 bp | CAAGCACCAGGTCTGGATACCTTCTGTATTCAAGTTGGATTTCTGTaGCTGAAGCCTAGCCAGACAGTGGCAGATAAGCTAGACAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QAPGLDTFCIQVGFL*LKPSQTVADKLDRR Trigger: CCTCCTGTCTAGCTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACAGAAGGTATCCAGACCTGGTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR CCA 90 bp | GGCAATGTAAGGCAAAACTGTCCCACCATAACCCTGTGGCAATGCTaGAGCTTCCTAACAGCACCTTGTGACAGTACTGGTTCTGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GNVRQNCPTITLWQC*SFLTAPCDSTGSEK Trigger: TTTCTCAGAACCAGTACTGTCACAAGGTGCTGTTAGGAAGCTCCAGCATTGCCACAGGGTTATGGTGGGACAGTTTTGCCTTACATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR CCA 90 bp | GTGAACACCTTGAGAAATTTTGCTACCAACATCAATCTTCAAACTTaGCAAGAGCAGCAATTACACCCAGTGAGAGCCTGGTCCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: VNTLRNFATNINLQT*QEQQLHPVRAWSPC Trigger: GCATGGGGACCAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGTTTGAAGATTGATGTTGGTAGCAAAATTTCTCAAGGTGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR GCA 90 bp | ACAGTATGGGTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATaGTTGAATTTTAGTAGTAAGCACATAGTGCCACACCCACCCATC | + |
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Preference number: 1 (lower is better) Translates to: TVWVHRVYCRSVVSQ*LNFSSKHIVPHPPI Trigger: GATGGGTGGGTGTGGCACTATGTGCTTACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGACCCATACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
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| 3UTR GCA 90 bp | TTTCTCCCTAAATACATGTATGGCCAGGTCACGGGCTCAAAGGTTTaGAACCTAAAATACACTATACAATATCCACTGGTCAGGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: FLPKYMYGQVTGSKV*NLKYTIQYPLVRYR Trigger: CCTGTACCTGACCAGTGGATATTGTATAGTGTATTTTAGGTTGCAAACCTTTGAGCCCGTGACCTGGCCATACATGTATTTAGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | CTAGAATGGAGGCTTCCAGTGCCTGGTTGTGTTAAAGTAAGTGGTTaGATCTATTTAATAAACATTGGTCTTTCTTCTCCATTTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LEWRLPVPGCVKVSG*IYLINIGLSSPFCS Trigger: ACTGCAAAATGGAGAAGAAAGACCAATGTTTATTAAATAGATTCAACCACTTACTTTAACACAACCAGGCACTGGAAGCCTCCATTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR TCA 90 bp | CACTATACAATATCCACTGGTCAGGTACAGGCACCTCTACCTTTATaGAAGTTTAATTTAAGCATGAATTTTTATCACTCAAGCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HYTISTGQVQAPLPL*KFNLSMNFYHSSQA Trigger: AGCTTGGCTTGAGTGATAAAAATTCATGCTTAAATTAAACTTTCATAAAGGTAGAGGTGCCTGTACCTGACCAGTGGATATTGTATAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAATAACAGGGCCATGCCACGACCCTGGGGAGCCCTaGGTGGACAAGTCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: DAGPQTGPLICAITGPCHDPGEP*VDKSKG Trigger: ACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTC...GTGGCATGGCCCTGTTATTGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAGACCCTGGGGAGCCCTaGGTGGACAAGTCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NRVRTGDAGPQTGPLICADPGEP*VDKSKG Trigger: ACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTC...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGATCTTGTGGGGATGGTaGCCCTGGGGAGCCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LDRRLETHWIWLGSISHWILWGW*PWGALG Trigger: ACCCAGGGCTCCCCAGGGTCACCATCCCCACAAGAT...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCCTGGGCTCTACAGTaGGACCCTGAAGAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKAWALQ*DPEERG Trigger: TCCTCTCTCTTCAGGGTCTCACTGTAGAGCCCAGGC...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR CCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCACTGGGGAGCCCTGGGTaGACAAGTCCAAGGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: NRVRTGDAGPQTGPLICALGSPG*TSPRVS Trigger: ACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAG...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTAATGTGGGGCCTGGCCAACCAAGCACCAGGTCTGGATACCTTCTGTATCCATCCCAGCTGGACTaGGTAACTCCATGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: RANVGPGQPSTRSGYLLYPSQLD*VTPCHP Trigger: TGGATGGCATGGAGTTACTCAGTCCAGCTGGGATGG...ATACAGAAGGTATCCAGACCTGGTGCTTGGTTGGCCAGGCCCCACATTAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAGGATGCTGCTCAGCCTaGAGAAAGCTGGATCCGACA | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSGCCSA*RKLDPT Trigger: TGTCGGATCCAGCTTTCTCCAGGCTGAGCAGCATCC...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR TCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGACTTTCCAGAATAGGGTaGGGACAGGAGATGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGLSRIG*GQEMQV Trigger: GACCTGCATCTCCTGTCCTCACCCTATTCTGGAAAG...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCATCTACAGTGAGACCCTaGAGAGAGAGGAGGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSSTVRP*RERRVC Trigger: ACACACCCTCCTCTCTCTTCAGGGTCTCACTGTAGA...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAAGGAAGGAAGGATGCTaGTCAGCCTGGAGAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSRKEGC*SAWRKL Trigger: CAGCTTTCTCCAGGCTGAGCAGCATCCTTCCTTCCT...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAAGGAGGAAGGAAGGATaGTGCTCAGCCTGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSRRKEG*CSAWRK Trigger: CTTTCTCCAGGCTGAGCAGCATCCTTCCTTCCTCCT...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR TCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACTTTCCAGAATAGGGTaGGGACAGGAGATGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRLSRIG*GQEMQV Trigger: GACCTGCATCTCCTGTCCTCACCCTATTCTGGAAAG...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | AGTATCTTGGCAGAGGCAGTTGCTTTCTGTAAGAATGCTTTCCAGAATAGGGTGCTGGGGAGCCCTGGGTaGACAAGTCCAAGGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SILAEAVAFCKNAFQNRVLGSPG*TSPRVS Trigger: ACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAG...CACCCTATTCTGGAAAGCATTCTTACAGAAAGCAACTGCCTCTGCCAAGATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACAGCCTGGAGAAAGCTaGATCCGACATGACATGCTT | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSQPGES*IRHDML Trigger: AAGCATGTCATGTCGGATCCAGCTTTCTCCAGGCTG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR TCA 90 bp | TGTATTCAAGTTGGATTTCTGTGGCTGAAGCCTAGCCAGACAGTGGCAGATAAGCCATCCCAGCTGGACTaGGTAACTCCATGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: CIQVGFLWLKPSQTVADKPSQLD*VTPCHP Trigger: TGGATGGCATGGAGTTACTCAGTCCAGCTGGGATGG...CTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACTAGTGTTACAGTCATaGGGAGGAAGGAAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: SWAHTCNSSTLAGKACRSLVLQS*GGRKDA Trigger: AGCATCCTTCCTTCCTCCTCATGACTGTAACACTAG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| 3UTR-3UTR CCA 90 bp | GTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGTACAATTTCTAGTCTGGGGAGCCCTGGGTaGACAAGTCCAAGGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VTPCHPSINSEGCCTISSLGSPG*TSPRVS Trigger: ACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAG...ACTAGAAATTGTACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCCATGTTCACATACAACATCAGAAGAGGGAAGGAGCTTTTAGCTTGAAAGCAATAACAGGGCCATaGCACCATCACCCAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: GAHVHIQHQKREGAFSLKAITGP*HHHPAR Trigger: TCTAGCTGGGTGATGGTGGCATGGCCCTGTTATTGC...TTTCAAGCTAAAAGCTCCTTCCCTCTTCTGATGTTGTATGTGAACATGGGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAACCAAGCACCAGGTCTGGATACCTTCTGTATTCAAGTTGGATTTCTGTGAGACCCACTGGATATaGCTGGGAAGCATATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: WPTKHQVWIPSVFKLDFCETHWI*LGSISH Trigger: GTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTC...ACAGAAATCCAACTTGAATACAGAAGGTATCCAGACCTGGTGCTTGGTTGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR CAA 90 bp | GTATGGGTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATGCTaGAATTTTAGTAGTAAGCACATAGTGCCACACCCACCCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: VWVHRVYCRSVVSQC*NFSSKHIVPHPPIS Trigger: GGAGATGGGTGGGTGTGGCACTATGTGCTTACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGACCCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
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| 3UTR-3UTR GCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAAACAATGAAGAGGACTaGCTGCTTAGAACCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NRVRTGDAGPQTGPLICANNEED*LLRTKN Trigger: ATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTT...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGACAATTTCTAGTATCTTaGCAGAGGCAGTTGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGQFLVS*QRQLLS Trigger: AGAAAGCAACTGCCTCTGCCAAGATACTAGAAATTG...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGCAATTTCTAGTATCTTaGCAGAGGCAGTTGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMQFLVS*QRQLLS Trigger: AGAAAGCAACTGCCTCTGCCAAGATACTAGAAATTG...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| 3UTR-3UTR GCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAAACAATGAAGAGGACTaGCTGCTTAGAACCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGNNEED*LLRTKN Trigger: ATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTT...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTATTCAAGTTGGATTTCTGTGGCTGAAGCCTAGCCAGACAGTGGCAGATAAGCAATTTCTAGTATCTTaGCAGAGGCAGTTGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CIQVGFLWLKPSQTVADKQFLVS*QRQLLS Trigger: AGAAAGCAACTGCCTCTGCCAAGATACTAGAAATTG...CTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGTACAATTTCTAGTAACCAAAAATCCACATaGATCCCCGAAATATGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VTPCHPSINSEGCCTISSNQKST*IPEICR Trigger: CCTACATATTTCGGGGATGCATGTGGATTTTTGGTT...ACTAGAAATTGTACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATGCTTGAATTTTAGTAGTAACAATGAAGAGGACTaGCTGCTTAGAACCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VHRVYCRSVVSQCLNFSSNNEED*LLRTKN Trigger: ATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTT...ACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATGCTTGAATTTTAGTAGTATCAACTCAGAAGGATaGTGTACAATTTCTAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VHRVYCRSVVSQCLNFSSINSEG*CTISSI Trigger: GATACTAGAAATTGTACAGCATCCTTCTGAGTTGAT...ACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| 3UTR GCA 72 bp | TGTCCAGAGAAGAAAACAGGCCAGGCCATCCCTAGATaGATGCCTACACTAGAGCTGGCCCGAGGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPEKKTGQAIPR*MPTLELARGEG Trigger: CCCCTCCCCTCGGGCCAGCTCTAGTGTAGGCATGCATCTAGGGATGGCCTGGCCTGTTTTCTTCTCTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR CCA 72 bp | TTGGAATCTTGTGGGGATGGTGACCCTGGGGAGCCCTaGGTGGACAAGTCCAAGGGTCAGTGGTGTGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LESCGDGDPGEP*VDKSKGQWCEA Trigger: GGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATCCCCACAAGATTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR CCA 72 bp | GACAGTGTACCAGATGATACCAGTGTCTGTAAAGGGTaGCCTGGGAGGGCGAGGGCAGAGCCCAGTCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: DSVPDDTSVCKG*PGRARAEPSRT Trigger: TGTGCGACTGGGCTCTGCCCTCGCCCTCCCAGGCCACCCTTTACAGACACTGGTATCATCTGGTACACTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR TCA 72 bp | TGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTaGCCCTGGGGAGCCCTGGGTGGACAAGTCCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CGWSFIGILWGW*PWGALGGQVQG Trigger: CCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR TCA 72 bp | ACACAGCCGCCACACCTGAGACCTAGAGACAGGTACTaGGTGAGGTTCCTGCTCTGCAGTGTCTGCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TQPPHLRPRDRY*VRFLLCSVCSL Trigger: CAGACTGCAGACACTGCAGAGCAGGAACCTCACTCAGTACCTGTCTCTAGGTCTCAGGTGTGGCGGCTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR CCA 72 bp | ACGCTGCCTCTGAGTGCTGTGGGACTGCTCAGGGGCTaGCAGCAAATCGTGATGCTTCCTATAGAACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPLSAVGLLRG*QQIVMLPIEPH Trigger: GTGAGGTTCTATAGGAAGCATCACGATTTGCTGCCAGCCCCTGAGCAGTCCCACAGCACTCAGAGGCAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR CCA 72 bp | ACTTGGCAAGAGCAGCAATTACACCCAGTGAGAGCCTaGTCCCCATGCAGAAGCCTGTCTGACTCGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWQEQQLHPVRA*SPCRSLSDSAV Trigger: CACAGCCGAGTCAGACAGGCTTCTGCATGGGGACCAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR GCA 72 bp | CATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATaGAGATCACCAGCTGTAGGCCAGCCTGGGCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HTCNSSTLAGKA*RSPAVGQPGLY Trigger: GTAGAGCCCAGGCTGGCCTACAGCTGGTGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR TCA 72 bp | ACACTAAGTGGACCACTTAAGGAGGTTCTGCCTGCCTaGCTCATCCACCCTGCAAGAGGGCATCTGCTTACC | + |
|
Preference number: 3 (lower is better) Translates to: TLSGPLKEVLPA*LIHPARGHLLT Trigger: GGTAAGCAGATGCCCTCTTGCAGGGTGGATGAGTCAGGCAGGCAGAACCTCCTTAAGTGGTCCACTTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR TCA 72 bp | TTCTGTCATCGGGTAGGCATCACTCACATGGTGAGATaGAAGCCTCTGGCCATGTCAGCCCACAAGCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FCHRVGITHMVR*KPLAMSAHKRA Trigger: TGCACGCTTGTGGGCTGACATGGCCAGAGGCTTTCATCTCACCATGTGAGTGATGCCTACCCGATGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR CCA 72 bp | GGAGGAAGGAAGGATGCTGCTCAGCCTGGAGAAAGCTaGATCCGACATGACATGCTTGCCTTCTGTTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GGRKDAAQPGES*IRHDMLAFCFH Trigger: GTGGAAACAGAAGGCAAGCATGTCATGTCGGATCCAGCTTTCTCCAGGCTGAGCAGCATCCTTCCTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR TCA 72 bp | ATGGCTGGGAAGCATATCTCACTGGCCAGGACTAGCTaGGGGGCCCATGTTCACATACAACATCAGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MAGKHISLARTS*GAHVHIQHQKR Trigger: CCTCTTCTGATGTTGTATGTGAACATGGGCCCCTCAGCTAGTCCTGGCCAGTGAGATATGCTTCCCAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR TCA 72 bp | GGATGCTGCTCAGCCTGGAGAAAGCTGGATCCGACATaGCATGCTTGCCTTCTGTTTCCACATTTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCCSAWRKLDPT*HACLLFPHFHP Trigger: AGGGTGGAAATGTGGAAACAGAAGGCAAGCATGTCATGTCGGATCCAGCTTTCTCCAGGCTGAGCAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR CCA 72 bp | GTGGCAGATAAGCTAGACAGGAGGTTAGAGACCCACTaGATATGGCTGGGAAGCATATCTCACTGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VADKLDRRLETH*IWLGSISHWPG Trigger: TCCTGGCCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR TCA 72 bp | ATCTTCAAACTTGGCAAGAGCAGCAATTACACCCAGTaGGAGCCTGGTCCCCATGCAGAAGCCTGTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: IFKLGKSSNYTQ*EPGPHAEACLT Trigger: AGTCAGACAGGCTTCTGCATGGGGACCAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGTTTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR GCA 72 bp | CTGCTCAGCCTGGAGAAAGCTGGATCCGACATGACATaGTTGCCTTCTGTTTCCACATTTCCACCCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLSLEKAGSDMT*LPSVSTFPPYS Trigger: GCTATAGGGTGGAAATGTGGAAACAGAAGGCAAGCATGTCATGTCGGATCCAGCTTTCTCCAGGCTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR CCA 72 bp | GATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATaGCTGGGAAGCATATCTCACTGGCCAGGACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DKLDRRLETHWI*LGSISHWPGLA Trigger: AGCTAGTCCTGGCCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR CCA 72 bp | AGGCAAAACTGTCCCACCATAACCCTGTGGCAATGCTaGAGCTTCCTAACAGCACCTTGTGACAGTACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RQNCPTITLWQC*SFLTAPCDSTG Trigger: ACCAGTACTGTCACAAGGTGCTGTTAGGAAGCTCCAGCATTGCCACAGGGTTATGGTGGGACAGTTTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR-3UTR CAA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGGTGGATGGTCTTTCATaGGAATCTTGTGGGGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LDRRLETHWIWLGSISHWVDGLS*ESCGDG Trigger: ACCATCCCCACAAGATTCCAATGAAAGACCATCCAC...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR TCA 72 bp | AACTCAGTGCACCCTCAACAACCATCCCAGCTGGACTaGGTAACTCCATGCCATCCATCCATCAACTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSVHPQQPSQLD*VTPCHPSINSE Trigger: TTCTGAGTTGATGGATGGATGGCATGGAGTTACTCAGTCCAGCTGGGATGGTTGTTGAGGGTGCACTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR TCA 72 bp | GTGAGTACCAGAATGTTCTTGCTAGTGTTACAGTCATaGGGAGGAAGGAAGGATGCTGCTCAGCCTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSTRMFLLVLQS*GGRKDAAQPGE Trigger: TTCTCCAGGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATTCTGGTACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTCTTGCTAGTGTTACAGTCATGAGGAGGAAGGAAGGATGCTGCTCAGCCTCCGACATGACATGCTaGCCTTCTGTTTCCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: NVLASVTVMRRKEGCCSASDMTC*PSVSTF Trigger: AAATGTGGAAACAGAAGGCAAGCATGTCATGTCGGA...GGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| 3UTR CCA 72 bp | GGTCTGGATACCTTCTGTATTCAAGTTGGATTTCTGTaGCTGAAGCCTAGCCAGACAGTGGCAGATAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GLDTFCIQVGFL*LKPSQTVADKL Trigger: TAGCTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACAGAAGGTATCCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR CCA 72 bp | TGCTTACCAAGCACAAGGCCGATCAACAGTCTAGAATaGAGGCTTCCAGTGCCTGGTTGTGTTAAAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLPSTRPINSLE*RLPVPGCVKVS Trigger: ACTTACTTTAACACAACCAGGCACTGGAAGCCTCCATTCTAGACTGTTGATCGGCCTTGTGCTTGGTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR GCA 72 bp | GTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATaGTTGAATTTTAGTAGTAAGCACATAGTGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: VHRVYCRSVVSQ*LNFSSKHIVPH Trigger: GTGTGGCACTATGTGCTTACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| 3UTR GCA 72 bp | TCAAGCCAAGCTACAGTATGGGTCCACAGAGTATACTaGAGGTCAGTAGTGTCACAATGCTTGAATTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSQATVWVHRVY*RSVVSQCLNFS Trigger: ACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGACCCATACTGTAGCTTGGCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| 3UTR CCA 72 bp | TTGAGAAATTTTGCTACCAACATCAATCTTCAAACTTaGCAAGAGCAGCAATTACACCCAGTGAGAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRNFATNINLQT*QEQQLHPVRAW Trigger: CCAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGTTTGAAGATTGATGTTGGTAGCAAAATTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR GCA 72 bp | AAATACATGTATGGCCAGGTCACGGGCTCAAAGGTTTaGAACCTAAAATACACTATACAATATCCACTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KYMYGQVTGSKV*NLKYTIQYPLV Trigger: GACCAGTGGATATTGTATAGTGTATTTTAGGTTGCAAACCTTTGAGCCCGTGACCTGGCCATACATGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR TCA 90 bp | GATGGTGACCCTGGGGAGCCCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAATCATTACAGCGGGGCTaGGGAGCCACAGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGDPGEPWVDKSKGQWCESLQRG*GATAGG Trigger: CCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGA...TTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGTACACCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKYTGPR*VLTVVA Trigger: GGCGACCACCGTCAGCACGCAGCGCGGGCCGGTGTA...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGATACACCGGCCCGCGCTaGGTGCTGACGGTGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGYTGPR*VLTVVA Trigger: GGCGACCACCGTCAGCACGCAGCGCGGGCCGGTGTA...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGAGCTGCTGGGCTGCCTaGGCATCCAGCTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKSCWAA*ASSWIC Trigger: GCAGATCCAGCTGGATGCCCAGGCAGCCCAGCAGCT...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CCA 90 bp | AGGGCTAATGTGGGGCCTGGCCAACCAAGCACCAGGTCTGGATACCTTCTGTATAGCTGCTGGGCTGCCTaGGCATCCAGCTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RANVGPGQPSTRSGYLLYSCWAA*ASSWIC Trigger: GCAGATCCAGCTGGATGCCCAGGCAGCCCAGCAGCT...ATACAGAAGGTATCCAGACCTGGTGCTTGGTTGGCCAGGCCCCACATTAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAAGCCAAGGGCCACAGGCGGGTCTTTGTTCCCTCTCTaGGCTTCAAGCACAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTSPRVSGVKPRATGGSLFPL*ASSTER Trigger: CCGTTCTGTGCTTGAAGCCCAGAGAGGGAACAAAGA...CCCGCCTGTGGCCCTTGGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR TCA 90 bp | AGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGTCATTACAGCGGGGCTaGGGAGCCACAGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGMWMVFHWNLVGMVTLGSLQRG*GATAGG Trigger: CCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGA...CCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTCCTCCATACTGCAGCTaGTGGGCTGCCTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YVGRGGADVQGRGMWMVFPPYCS*WAAWAS Trigger: GGATGCCCAGGCAGCCCAGCAGCTGCAGTATGGAGG...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTGCACCATGCCAGGGCTaGAGACAGCAGGCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVGRGGADVQGRGMWMVFAPCQG*RQQASL Trigger: CAGGGATGCCTGCTGTCTGCAGCCCTGGCATGGTGC...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTAGCTGCTGGGCTGCCTaGGCATCCAGCTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YVGRGGADVQGRGMWMVFSCWAA*ASSWIC Trigger: GCAGATCCAGCTGGATGCCCAGGCAGCCCAGCAGCT...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACAAGGCCGATCAACAGTCTAGAATGGAGGCTTCCAGTGCCTGGTTGTCCATACTGCAGCTGCTaGGCTGCCTGGGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTRPINSLEWRLPVPGCPYCSC*AAWASS Trigger: GCTGGATGCCCAGGCAGCCCAGCAGCTGCAGTATGG...ACAACCAGGCACTGGAAGCCTCCATTCTAGACTGTTGATCGGCCTTGTGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGCACTCGTCCTCCACTTaGCCCTGCTTCAGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKHSSST*PCFRDS Trigger: CGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTG...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACCTCCATACTGCAGCTaGTGGGCTGCCTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSPPYCS*WAAWAS Trigger: GGATGCCCAGGCAGCCCAGCAGCTGCAGTATGGAGG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGACTGTTCCTCCATACTaGAGCTGCTGGGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKTVPPY*SCWAAW Trigger: CCAGGCAGCCCAGCAGCTGCAGTATGGAGGAACAGT...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | CCCCTAACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAAGCACCATGCCAGGGCTaGAGACAGCAGGCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTLSPSNNEEDCLLRTKAPCQG*RQQASL Trigger: CAGGGATGCCTGCTGTCTGCAGCCCTGGCATGGTGC...TTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGTTAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | GCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGTGGCCATCGGCACCATaGCAGGGCTGCAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARQEVRDPLDMAGKHISLWPSAP*QGCRQQ Trigger: CTGCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCA...CAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGTGGCCATCGGCACCATaGCAGGGCTGCAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMWPSAP*QGCRQQ Trigger: CTGCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCA...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGTGGCCATCGGCACCATaGCAGGGCTGCAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDRRLETHWIWLGSISHWWPSAP*QGCRQQ Trigger: CTGCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCA...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGACCATACTGCAGCTGCTaGGCTGCCTGGGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGPYCSC*AAWASS Trigger: GCTGGATGCCCAGGCAGCCCAGCAGCTGCAGTATGG...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGAGGAGGCATCATCATaGCAGCTGGGAGGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKEEASS*QLGGTC Trigger: ACACGTCCCTCCCAGCTGCCATGATGATGCCTCCTC...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | CCAAGCACAAGGCCGATCAACAGTCTAGAATGGAGGCTTCCAGTGCCTGGTTGTACTGTTCCTCCATACTaGAGCTGCTGGGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTRPINSLEWRLPVPGCTVPPY*SCWAAW Trigger: CCAGGCAGCCCAGCAGCTGCAGTATGGAGGAACAGT...ACAACCAGGCACTGGAAGCCTCCATTCTAGACTGTTGATCGGCCTTGTGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR GCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGATCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGSSTWP*FRDSGM Trigger: CATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGA...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAATGTGGGGCCTGGCCAACCAAGCACCAGGTCTGGATACCTTCTGTATGACAGCAGGCATCCCTaGAATGGGCACATAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RANVGPGQPSTRSGYLLYDSRHP*NGHIAN Trigger: GTTGGCTATGTGCCCATTGCAGGGATGCCTGCTGTC...ATACAGAAGGTATCCAGACCTGGTGCTTGGTTGGCCAGGCCCCACATTAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | CCTACACTAGAGCTGGCCCGAGGGGAGGGGGCTCCAGTGAACACCTTGAGAAATATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTLELARGEGAPVNTLRNIRRKS*GSSPMY Trigger: GTACATTGGTGAACTCCCCCAGGACTTCCTCCGTAT...ATTTCTCAAGGTGTTCACTGGAGCCCCCTCCCCTCGGGCCAGCTCTAGTGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR CCA 90 bp | AGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGTCCAGCGAGGGTTCTTaGCCCCATTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGMWMVFHWNLVGMVTLGSSEGS*PHCVLW Trigger: CCACAGCACACAATGGGGCCAAGAACCCTCGCTGGA...CCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGTCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKSGMVM*VQAMRS Trigger: TGACCGCATAGCTTGGACCCACATCACCATCCCCGA...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CCA 90 bp | GATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAATAACAGGGCCATGCCACTCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DAGPQTGPLICAITGPCHSGMVM*VQAMRS Trigger: TGACCGCATAGCTTGGACCCACATCACCATCCCCGA...GTGGCATGGCCCTGTTATTGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTGAGGAGGCATCATCATaGCAGCTGGGAGGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVGRGGADVQGRGMWMVFEEASS*QLGGTC Trigger: ACACGTCCCTCCCAGCTGCCATGATGATGCCTCCTC...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | CAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGAGGAGGCATCATCATaGCAGCTGGGAGGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNRVRTGDAGPQTGPLICEEASS*QLGGTC Trigger: ACACGTCCCTCCCAGCTGCCATGATGATGCCTCCTC...ACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKLLVHS*HQDHRL Trigger: CAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAG...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| CDS-3UTR CCA 90 bp | GATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAATAACAGGGCCATGCCACCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DAGPQTGPLICAITGPCHLLVHS*HQDHRL Trigger: CAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAG...GTGGCATGGCCCTGTTATTGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR TCA 90 bp | CAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGGGGGCACTGTGCACTaGATGACTTTGTTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QNRVRTGDAGPQTGPLICGGTVH*MTLFQR Trigger: TCGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCC...ACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAAAATCCATCATTACAGCGGGGCTaGGGAGCCACAGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSPSNNEEDCLLRTKNPSLQRG*GATAGG Trigger: CCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGA...TGGATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGTCCAGCTGGATCTGCTaGTGCTGTTGTGTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKSSWIC*CCCVGV Trigger: AACACCCACACAACAGCAGCAGCAGATCCAGCTGGA...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| CDS-3UTR GCA 90 bp | GTGTACCAGATGATACCAGTGTCTGTAAAGGGTGGCCTGGGAGGGCGAGGGCAGCTTGGCCCCATTGTGTaGTGTGGGAGTTTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYQMIPVSVKGGLGGRGQLGPIV*CGSFIN Trigger: GTTTATGAAACTCCCACAGCACACAATGGGGCCAAG...CTGCCCTCGCCCTCCCAGGCCACCCTTTACAGACACTGGTATCATCTGGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR GCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGTGTGGGTCCAAGCTATaGGGTCATCCATGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKCGSKL*GHPWRR Trigger: CCTTCTCCATGGATGACCGCATAGCTTGGACCCACA...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| CDS-3UTR GCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGATCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRSSTWP*FRDSGM Trigger: CATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGA...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AATGTTCTTGCTAGTGTTACAGTCATGAGGAGGAAGGAAGGATGCTGCTCAGCCCCATACTGCAGCTGCTaGGCTGCCTGGGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLASVTVMRRKEGCCSAPYCSC*AAWASS Trigger: GCTGGATGCCCAGGCAGCCCAGCAGCTGCAGTATGG...GGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| CDS-3UTR CCA 90 bp | GATGGTGACCCTGGGGAGCCCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAACCCCATTGTGTGCTGTaGGAGTTTCATAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGDPGEPWVDKSKGQWCEPHCVL*EFHKQH Trigger: ATGCTGTTTATGAAACTCCCACAGCACACAATGGGG...TTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCATCCAGCGAGGGTTCTTaGCCCCATTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSSSEGS*PHCVLW Trigger: CCACAGCACACAATGGGGCCAAGAACCCTCGCTGGA...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
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| CDS-3UTR CCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGATCCAGCGAGGGTTCTTaGCCCCATTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGSSEGS*PHCVLW Trigger: CCACAGCACACAATGGGGCCAAGAACCCTCGCTGGA...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | CAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTTCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNRVRTGDAGPQTGPLICSGMVM*VQAMRS Trigger: TGACCGCATAGCTTGGACCCACATCACCATCCCCGA...ACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCACTCGTCCTCCACTTaGCCCTGCTTCAGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGRGMWMVFHWNLVGMVTHSSST*PCFRDS Trigger: CGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTG...GGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCTTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACACTCGTCCTCCACTTaGCCCTGCTTCAGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRHSSST*PCFRDS Trigger: CGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTG...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGCAGGCATCCCTGCAATaGGCACATAGCCAACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGMWMVFHWNLVGMVTLGQASLQ*AHSQHP Trigger: AGGGTGTTGGCTATGTGCCCATTGCAGGGATGCCTG...CCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | TTCCAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCCAGGCATCCCTGCAATaGGCACATAGCCAACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQNRVRTGDAGPQTGPLIQASLQ*AHSQHP Trigger: AGGGTGTTGGCTATGTGCCCATTGCAGGGATGCCTG...GATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR TCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAGGGGGCACTGTGCACTaGATGACTTTGTTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSGGTVH*MTLFQR Trigger: TCGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCC...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGATCAGGACCACAGGCTaGGGAGGCATCATCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMIRTTG*GGIIMA Trigger: TGCCATGATGATGCCTCCTCAGCCTGTGGTCCTGAT...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCATCCAGCTGGATCTGCTaGTGCTGTTGTGTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICASSWIC*CCCVGV Trigger: AACACCCACACAACAGCAGCAGCAGATCCAGCTGGA...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGGCATCCAGCTGGATCTaGTGCTGCTGTTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMASSWI*CCCCVG Trigger: ACCCACACAACAGCAGCAGCAGATCCAGCTGGATGC...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAGCATCCAGCTGGATCTaGTGCTGCTGTTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSASSWI*CCCCVG Trigger: ACCCACACAACAGCAGCAGCAGATCCAGCTGGATGC...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | GGGGCCCATGTTCACATACAACATCAGAAGAGGGAAGGAGCTTTTAGCTTGAAACCTCCATACTGCAGCTaGTGGGCTGCCTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GAHVHIQHQKREGAFSLKPPYCS*WAAWAS Trigger: GGATGCCCAGGCAGCCCAGCAGCTGCAGTATGGAGG...TTTCAAGCTAAAAGCTCCTTCCCTCTTCTGATGTTGTATGTGAACATGGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGAACTGTTCCTCCATACTaGAGCTGCTGGGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRTVPPY*SCWAAW Trigger: CCAGGCAGCCCAGCAGCTGCAGTATGGAGGAACAGT...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCATGTGGGTCCAAGCTATaGGGTCATCCATGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICACGSKL*GHPWRR Trigger: CCTTCTCCATGGATGACCGCATAGCTTGGACCCACA...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | AATGTTCTTGCTAGTGTTACAGTCATGAGGAGGAAGGAAGGATGCTGCTCAGCCTCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVLASVTVMRRKEGCCSASSTWP*FRDSGM Trigger: CATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGA...GGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | ACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAAAATCCATCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLSPSNNEEDCLLRTKNPSSTWP*FRDSGM Trigger: CATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGA...TGGATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGACAGCAGGCATCCCTaGAATGGGCACATAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARQEVRDPLDMAGKHISLDSRHP*NGHIAN Trigger: GTTGGCTATGTGCCCATTGCAGGGATGCCTGCTGTC...CAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGATCCAGCGAGGGTTCTTaGCCCCATTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRSSEGS*PHCVLW Trigger: CCACAGCACACAATGGGGCCAAGAACCCTCGCTGGA...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDRRLETHWIWLGSISHWLLVHS*HQDHRL Trigger: CAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAG...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTAACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAACAGGCATCCCTGCAATaGGCACATAGCCAACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTLSPSNNEEDCLLRTKQASLQ*AHSQHP Trigger: AGGGTGTTGGCTATGTGCCCATTGCAGGGATGCCTG...TTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGTTAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCGGGGGCACTGTGCACTaGATGACTTTGTTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGRGMWMVFHWNLVGMVTGGTVH*MTLFQR Trigger: TCGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCC...GGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCTTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACAAGGCCGATCAACAGTCTAGAATGGAGGCTTCCAGTGCCTGGTTGTGCTGCTGCTGTTGTGTaGGTGTTATACGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTRPINSLEWRLPVPGCAAAVV*VLYGGS Trigger: ACTTCCTCCGTATAACACCCACACAACAGCAGCAGC...ACAACCAGGCACTGGAAGCCTCCATTCTAGACTGTTGATCGGCCTTGTGCTTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR CCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGATCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRSGMVM*VQAMRS Trigger: TGACCGCATAGCTTGGACCCACATCACCATCCCCGA...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | TGTATTCAAGTTGGATTTCTGTGGCTGAAGCCTAGCCAGACAGTGGCAGATAAGCACTCGTCCTCCACTTaGCCCTGCTTCAGGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: CIQVGFLWLKPSQTVADKHSSST*PCFRDS Trigger: CGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTG...CTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GTGTACCAGATGATACCAGTGTCTGTAAAGGGTGGCCTGGGAGGGCGAGGGCAGATTCTTTGCCAATTTTaGCTGTACCACAGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYQMIPVSVKGGLGGRGQILCQF*LYHSDA Trigger: AGCATCACTGTGGTACAGGCAAAATTGGCAAAGAAT...CTGCCCTCGCCCTCCCAGGCCACCCTTTACAGACACTGGTATCATCTGGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR GCA 90 bp | GTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGTACAATTTCTAGTGCACCATGCCAGGGCTaGAGACAGCAGGCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTPCHPSINSEGCCTISSAPCQG*RQQASL Trigger: CAGGGATGCCTGCTGTCTGCAGCCCTGGCATGGTGC...ACTAGAAATTGTACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSIRRKS*GSSPMY Trigger: GTACATTGGTGAACTCCCCCAGGACTTCCTCCGTAT...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMIRRKS*GSSPMY Trigger: GTACATTGGTGAACTCCCCCAGGACTTCCTCCGTAT...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGCCCCATTGTGTGCTGTaGGAGTTTCATAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKPHCVL*EFHKQH Trigger: ATGCTGTTTATGAAACTCCCACAGCACACAATGGGG...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CCA 90 bp | CGTGATGCTTCCTATAGAACCTCACAGAACAAAGTGGCCCTGTGTTCAACCTATGAGGAGGCATCATCATaGCAGCTGGGAGGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDASYRTSQNKVALCSTYEEASS*QLGGTC Trigger: ACACGTCCCTCCCAGCTGCCATGATGATGCCTCCTC...ATAGGTTGAACACAGGGCCACTTTGTTCTGTGAGGTTCTATAGGAAGCATCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACAGGACCACTGATCTGTGCAATAACAGGGCCATGCCACCATCACCCATTGGGAAACATGTCCTaGATAGCTTTGAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTGPLICAITGPCHHHPLGNMS*IALRSS Trigger: AGAGGACCTCAAAGCTATCCAGGACATGTTTCCCAA...TGGGTGATGGTGGCATGGCCCTGTTATTGCACAGATCAGTGGTCCTGTTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGACCCATGTCTTTGTTCCCTCTCTaGGCTTCAAGCACAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLCDEGLSTRTAPGVRPMSLFPL*ASSTER Trigger: CCGTTCTGTGCTTGAAGCCCAGAGAGGGAACAAAGA...CATGGGTCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR TCA 90 bp | TGTATTCAAGTTGGATTTCTGTGGCTGAAGCCTAGCCAGACAGTGGCAGATAAGGGGGGCACTGTGCACTaGATGACTTTGTTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CIQVGFLWLKPSQTVADKGGTVH*MTLFQR Trigger: TCGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCC...CTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR TCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCATTTGCAGCAAGGAATTaGTGGCAGCATCTTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICAFAARN*WQHLCS Trigger: GGAACAAAGATGCTGCCATCAATTCCTTGCTGCAAA...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTTCCAGCTGGATCTGCTaGTGCTGTTGTGTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKLDRRLETHWIWLGSISSSWIC*CCCVGV Trigger: AACACCCACACAACAGCAGCAGCAGATCCAGCTGGA...AGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACTTGGCCCCATTGTGTaGTGTGGGAGTTTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSLGPIV*CGSFIN Trigger: GTTTATGAAACTCCCACAGCACACAATGGGGCCAAG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | GATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTTGTGGGTCCAAGCTATaGGGTCATCCATGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKLDRRLETHWIWLGSISCGSKL*GHPWRR Trigger: CCTTCTCCATGGATGACCGCATAGCTTGGACCCACA...AGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGGACTCTTCACCCATTTaGAGCAAGGAATTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGMWMVFHWNLVGMVTLGDSSPI*SKELMA Trigger: TGCCATCAATTCCTTGCTGCAAATGGGTGAAGAGTC...CCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAGACTCTTCACCCATTTaGAGCAAGGAATTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICADSSPI*SKELMA Trigger: TGCCATCAATTCCTTGCTGCAAATGGGTGAAGAGTC...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTCCCCATTGTGTGCTGTaGGAGTTTCATAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YVGRGGADVQGRGMWMVFPHCVL*EFHKQH Trigger: ATGCTGTTTATGAAACTCCCACAGCACACAATGGGG...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCACCCCATTGTGTGCTGTaGGAGTTTCATAAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICAPHCVL*EFHKQH Trigger: ATGCTGTTTATGAAACTCCCACAGCACACAATGGGG...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCPRKGYVDGLSLESCGDLLVHS*HQDHRL Trigger: CAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAG...ATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCTTCCTTGGACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGATTCTTTGCCAATTTTaGCTGTACCACAGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKILCQF*LYHSDA Trigger: AGCATCACTGTGGTACAGGCAAAATTGGCAAAGAAT...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAATGTGGGGCCTGGCCAACCAAGCACCAGGTCTGGATACCTTCTGTATATTCTTTGCCAATTTTaGCTGTACCACAGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RANVGPGQPSTRSGYLLYILCQF*LYHSDA Trigger: AGCATCACTGTGGTACAGGCAAAATTGGCAAAGAAT...ATACAGAAGGTATCCAGACCTGGTGCTTGGTTGGCCAGGCCCCACATTAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
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| CDS-3UTR GCA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGGACTCTTCACCCATTTaGAGCAAGGAATTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDRRLETHWIWLGSISHWDSSPI*SKELMA Trigger: TGCCATCAATTCCTTGCTGCAAATGGGTGAAGAGTC...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | AATGTTCTTGCTAGTGTTACAGTCATGAGGAGGAAGGAAGGATGCTGCTCAGCCGCTGCTGCTGTTGTGTaGGTGTTATACGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLASVTVMRRKEGCCSAAAAVV*VLYGGS Trigger: ACTTCCTCCGTATAACACCCACACAACAGCAGCAGC...GGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CCA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGATTGGGAAACATGTCCTaGATAGCTTTGAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGLGNMS*IALRSS Trigger: AGAGGACCTCAAAGCTATCCAGGACATGTTTCCCAA...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR CCA 90 bp | CCCCTAACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAATTGGGAAACATGTCCTaGATAGCTTTGAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTLSPSNNEEDCLLRTKLGNMS*IALRSS Trigger: AGAGGACCTCAAAGCTATCCAGGACATGTTTCCCAA...TTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGTTAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS-3UTR GCA 90 bp | TTCCAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCCATGCCATAATTCTTTaGCAATTTTGCCTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQNRVRTGDAGPQTGPLIHAIIL*QFCLYH Trigger: GTGGTACAGGCAAAATTGGCAAAGAATTATGGCATG...GATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR GCA 90 bp | AATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTGTGCAGGTCCATACGAGTCATaGCATAATTCTTTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: NRVRTGDAGPQTGPLICAGPYES*HNSLPI Trigger: AATTGGCAAAGAATTATGGCATGACTCGTATGGACC...TGCACAGATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CCA 90 bp | AGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATTCTTTGTTCCCTCTCTaGGCTTCAAGCACAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: RCPRKGYVDGLSLESCGDSLFPL*ASSTER Trigger: CCGTTCTGTGCTTGAAGCCCAGAGAGGGAACAAAGA...ATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCTTCCTTGGACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR TCA 90 bp | GATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTTTTGCAGCAAGGAATTaGTGGCAGCATCTTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKLDRRLETHWIWLGSISFAARN*WQHLCS Trigger: GGAACAAAGATGCTGCCATCAATTCCTTGCTGCAAA...AGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACATGCCATAATTCTTTaGCAATTTTGCCTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSHAIIL*QFCLYH Trigger: GTGGTACAGGCAAAATTGGCAAAGAATTATGGCATG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCAGGTCCATACGAGTCATaGCATAATTCTTTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTCNSSTLAGKACRSGPYES*HNSLPI Trigger: AATTGGCAAAGAATTATGGCATGACTCGTATGGACC...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR GCA 90 bp | AGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATCTTGGCCCCATTGTGTaGTGTGGGAGTTTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RCPRKGYVDGLSLESCGDLGPIV*CGSFIN Trigger: GTTTATGAAACTCCCACAGCACACAATGGGGCCAAG...ATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCTTCCTTGGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GGGGCCCATGTTCACATACAACATCAGAAGAGGGAAGGAGCTTTTAGCTTGAAACTTGGCCCCATTGTGTaGTGTGGGAGTTTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAHVHIQHQKREGAFSLKLGPIV*CGSFIN Trigger: GTTTATGAAACTCCCACAGCACACAATGGGGCCAAG...TTTCAAGCTAAAAGCTCCTTCCCTCTTCTGATGTTGTATGTGAACATGGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR GCA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGAGGTCCATACGAGTCATaGCATAATTCTTTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRGPYES*HNSLPI Trigger: AATTGGCAAAGAATTATGGCATGACTCGTATGGACC...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR TCA 90 bp | GTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGTACAATTTCTAGTTTTGCAGCAAGGAATTaGTGGCAGCATCTTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTPCHPSINSEGCCTISSFAARN*WQHLCS Trigger: GGAACAAAGATGCTGCCATCAATTCCTTGCTGCAAA...ACTAGAAATTGTACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| 3UTR CAA 72 bp | CACAGAGTATACTGCAGGTCAGTAGTGTCACAATGCTaGAATTTTAGTAGTAAGCACATAGTGCCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRVYCRSVVSQC*NFSSKHIVPHP Trigger: TGGGTGTGGCACTATGTGCTTACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| 3UTR CAA 72 bp | CTTGAGAAATTTTGCTACCAACATCAATCTTCAAACTaGGCAAGAGCAGCAATTACACCCAGTGAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKFCYQHQSSN*ARAAITPSESL Trigger: CAGGCTCTCACTGGGTGTAATTGCTGCTCTTGCCAAGTTTGAAGATTGATGTTGGTAGCAAAATTTCTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001950.12 |
||
| 3UTR CAA 72 bp | ATCAACTCAGAAGGATGCTGTACAATTTCTAGTATCTaGGCAGAGGCAGTTGCTTTCTGTAAGAATGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: INSEGCCTISSI*AEAVAFCKNAF Trigger: GAAAGCATTCTTACAGAAAGCAACTGCCTCTGCCAAGATACTAGAAATTGTACAGCATCCTTCTGAGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 90 bp | GGGGCTGAGGAGCCACAGCTGGTGGGGGCATGGCCATCGGCACCATaGCAGGGCTGCAGACAGCAGGCATCCCTGCAATGGGCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAEEPQLVGAWPSAP*QGCRQQASLQWAHS Trigger: GCTATGTGCCCATTGCAGGGATGCCTGCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCATGCCCCCACCAGCTGTGGCTCCTCAGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 90 bp | GAGCCACAGCTGGTGGGGGCATGGCCATCGGCACCATGCCAGGGCTaGAGACAGCAGGCATCCCTGCAATGGGCACATAGCCAACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EPQLVGAWPSAPCQG*RQQASLQWAHSQHP Trigger: AGGGTGTTGGCTATGTGCCCATTGCAGGGATGCCTGCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCATGCCCCCACCAGCTGTGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | AGCTTTGAGGTCCTCTTCATTACAGCGGGGCTGAGGAGCCACAGCTaGTGGGGGCATGGCCATCGGCACCATGCCAGGGCTGCAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFEVLFITAGLRSHS*WGHGHRHHARAADS Trigger: GCTGTCTGCAGCCCTGGCATGGTGCCGATGGCCATGCCCCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGAAGAGGACCTCAAAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 90 bp | CCCTGCCTCCCACTCAGGCTATACCACTCGTCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATGGTGATGTGGGTCCAAGCTATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCLPLRLYHSSSTWP*FRDSGMVMWVQAMR Trigger: CCGCATAGCTTGGACCCACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGGTATAGCCTGAGTGGGAGGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAAGCCAAGGGCCACAGGCGGGTTCCAGCGAGGGTTCTaGGCCCCATTGTGTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGWTSPRVSGVKPRATGGFQRGF*APLCAV Trigger: CACAGCACACAATGGGGCCAAGAACCCTCGCTGGAA...CCCGCCTGTGGCCCTTGGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GATGGTGACCCTGGGGAGCCCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAACCACTCGTCCTCCACTaGGCCCTGCTTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: DGDPGEPWVDKSKGQWCEPLVLH*ALLQGL Trigger: GAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGG...TTCACACCACTGACCCTTGGACTTGTCCACCCAGGGCTCCCCAGGGTCACCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | TCGTCCTCCACTTGGCCCTGCTTCAGGGACTCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCATCCATGGAGAAGGCGCGCTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSTWPCFRDSGMVM*VQAMRSSMEKARSS Trigger: CGATGAGCGCGCCTTCTCCATGGATGACCGCATAGCTTGGACCCACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | TGGATCTGCTGCTGCTGTTGTGTGGGTGTTATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTACACCGGCCCGCGCTGCGTGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: WICCCCCVGVIRRKS*GSSPMYTGPRCVLT Trigger: CGTCAGCACGCAGCGCGGGCCGGTGTACATTGGTGAACTCCCCCAGGACTTCCTCCGTATAACACCCACACAACAGCAGCAGCAGATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 |
||
| CDS TCA 90 bp | AACATGTCCTGGATAGCTTTGAGGTCCTCTTCATTACAGCGGGGCTaGGGAGCCACAGCTGGTGGGGGCATGGCCATCGGCACCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NMSWIALRSSSLQRG*GATAGGGMAIGTMP Trigger: TGGCATGGTGCCGATGGCCATGCCCCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGAAGAGGACCTCAAAGCTATCCAGGACATGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGGACAAGTCCAAGGGTCAGTGGTGTGAAGCCAAGGGCCACAGGCGGGTTGATGGCAGCATCTTaGTTCCCTCTCTGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGWTSPRVSGVKPRATGGLMAAS*FPLWAS Trigger: TGAAGCCCAGAGAGGGAACAAAGATGCTGCCATCAA...CCCGCCTGTGGCCCTTGGCTTCACACCACTGACCCTTGGACTTGTCCACCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | CATCCCTGCAATGGGCACATAGCCAACACCCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTGAGGAGGCATCATCATGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPCNGHIANTLLVHS*HQDHRLRRHHHGSW Trigger: CCAGCTGCCATGATGATGCCTCCTCAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAGGGTGTTGGCTATGTGCCCATTGCAGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | GAGGTCTGCAATGGGCACATAGCCAACACCCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTGAGGAGGCATCATCATGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVCNGHIANTLLVHS*HQDHRLRRHHHGSW Trigger: CCAGCTGCCATGATGATGCCTCCTCAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAGGGTGTTGGCTATGTGCCCATTGCAGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | CTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGGCCACTCGTCCTCCACTaGGCCCTGCTTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LDRRLETHWIWLGSISHWPLVLH*ALLQGL Trigger: GAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGG...CCAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCACCACTCGTCCTCCACTaGGCCCTGCTTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SWAHTCNSSTLAGKACRSPLVLH*ALLQGL Trigger: GAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGG...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | GCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGCCACTCGTCCTCCACTaGGCCCTGCTTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARQEVRDPLDMAGKHISLPLVLH*ALLQGL Trigger: GAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGG...CAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 90 bp | GAAGGCGCGCTCATCGAAGATCTCAAGGTAGAACGAGTCCACACCTaGGGGCACTGTGCACTGAATGACTTTGTTCCAGCGAGGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGALIEDLKVERVHT*GHCALNDFVPARVL Trigger: AAGAACCCTCGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCCAGGTGTGGACTCGTTCTACCTTGAGATCTTCGATGAGCGCGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GAGCGGAAAGGGAGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGATCTGCTGCTGCTGTaGTGTGGGTGTTATACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERKGSWAHTCNSSTLAGKDLLLL*CGCYTE Trigger: CTCCGTATAACACCCACACAACAGCAGCAGCAGATC...CTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCTCCCTTTCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGCACATACCTGTAATTCCAGCACTCTAGCCGGTAAGGCATGCAGATCATTCCAGCGAGGGTTCTaGGCCCCATTGTGTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWAHTCNSSTLAGKACRSFQRGF*APLCAV Trigger: CACAGCACACAATGGGGCCAAGAACCCTCGCTGGAA...TGATCTGCATGCCTTACCGGCTAGAGTGCTGGAATTACAGGTATGTGCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | AGGGGTATGTGGATGGTCTTTCATTGGAATCTTGTGGGGATGGTGACCCTGGGGGATCTGCTGCTGCTGTaGTGTGGGTGTTATACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGMWMVFHWNLVGMVTLGDLLLL*CGCYTE Trigger: CTCCGTATAACACCCACACAACAGCAGCAGCAGATC...CCCCAGGGTCACCATCCCCACAAGATTCCAATGAAAGACCATCCACATACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS GCA 90 bp | TCTTGGATGCAGGGTCGTGTTTCCATAGATAGCACAGCAGAGGTCTaGAATGGGCACATAGCCAACACCCTGCTGGTACACAGTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWMQGRVSIDSTAEV*NGHIANTLLVHSWH Trigger: ATGCCAACTGTGTACCAGCAGGGTGTTGGCTATGTGCCCATTGCAGACCTCTGCTGTGCTATCTATGGAAACACGACCCTGCATCCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | ACTCTGTCCCCCAGCAACAATGAAGAGGACTGCCTGCTTAGAACCAAAAATCCATTCCAGCGAGGGTTCTaGGCCCCATTGTGTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSPSNNEEDCLLRTKNPFQRGF*APLCAV Trigger: CACAGCACACAATGGGGCCAAGAACCCTCGCTGGAA...TGGATTTTTGGTTCTAAGCAGGCAGTCCTCTTCATTGTTGCTGGGGGACAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | TTCCAGAATAGGGTGAGGACAGGAGATGCAGGTCCCCAAACAGGACCACTGATCTTGATGGCAGCATCTTaGTTCCCTCTCTGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQNRVRTGDAGPQTGPLILMAAS*FPLWAS Trigger: TGAAGCCCAGAGAGGGAACAAAGATGCTGCCATCAA...GATCAGTGGTCCTGTTTGGGGACCTGCATCTCCTGTCCTCACCCTATTCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCATGTTCACATACAACATCAGAAGAGGGAAGGAGCTTTTAGCTTGAAATTCCAGCGAGGGTTCTaGGCCCCATTGTGTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GAHVHIQHQKREGAFSLKFQRGF*APLCAV Trigger: CACAGCACACAATGGGGCCAAGAACCCTCGCTGGAA...TTTCAAGCTAAAAGCTCCTTCCCTCTTCTGATGTTGTATGTGAACATGGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGTTGATGGCAGCATCTTaGTTCCCTCTCTGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQEVRDPLDMAGKHISLLMAAS*FPLWAS Trigger: TGAAGCCCAGAGAGGGAACAAAGATGCTGCCATCAA...CAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 90 bp | GCAGTAAGGGTCCATACGAGTCATGCCATAATTCTTTGCCAATTTTaGCTGTACCACAGTGATGCTGAGGCGACCCACGGTACCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVRVHTSHAIILCQF*LYHSDAEATHGTNC Trigger: ACAGTTGGTACCGTGGGTCGCCTCAGCATCACTGTGGTACAGGCAAAATTGGCAAAGAATTATGGCATGACTCGTATGGACCCTTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 |
||
| CDS-3UTR CAA 90 bp | CCCCAAACAGGACCACTGATCTGTGCAATAACAGGGCCATGCCACCATCACCCAATTTGCAGCAAGGAATaGATGGCAGCATCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQTGPLICAITGPCHHHPICSKE*MAASLF Trigger: GAACAAAGATGCTGCCATCAATTCCTTGCTGCAAAT...TGGGTGATGGTGGCATGGCCCTGTTATTGCACAGATCAGTGGTCCTGTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | TGTATTCAAGTTGGATTTCTGTGGCTGAAGCCTAGCCAGACAGTGGCAGATAAGGATCTGCTGCTGCTGTaGTGTGGGTGTTATACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CIQVGFLWLKPSQTVADKDLLLL*CGCYTE Trigger: CTCCGTATAACACCCACACAACAGCAGCAGCAGATC...CTTATCTGCCACTGTCTGGCTAGGCTTCAGCCACAGAAATCCAACTTGAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CAA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGAACTTCCCTGTCCATGTaGGGAAACATGTCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRTSLSM*GNMSWI Trigger: TATCCAGGACATGTTTCCCAACATGGACAGGGAAGT...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | TATGTAGGAAGGGGCGGCGCAGATGTCCAAGGAAGGGGTATGTGGATGGTCTTTATTTGCAGCAAGGAATaGATGGCAGCATCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YVGRGGADVQGRGMWMVFICSKE*MAASLF Trigger: GAACAAAGATGCTGCCATCAATTCCTTGCTGCAAAT...AAAGACCATCCACATACCCCTTCCTTGGACATCTGCGCCGCCCCTTCCTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGAGTAAGAATGTCCTGGATAGCTTaGAGGTCCTCTTCATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGLCDEGLSTRTAPGVRMSWIA*RSSSLQ Trigger: CTGTAATGAAGAGGACCTCAAAGCTATCCAGGACAT...TCTTACTCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GATAAGCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTACTTCCCTGTCCATGTaGGGAAACATGTCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: DKLDRRLETHWIWLGSISTSLSM*GNMSWI Trigger: TATCCAGGACATGTTTCCCAACATGGACAGGGAAGT...AGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGCTTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGACAGGAGGTTAGAGACCCACTGGATATGGCTGGGAAGCATATCTCACTGATTTGCAGCAAGGAATaGATGGCAGCATCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARQEVRDPLDMAGKHISLICSKE*MAASLF Trigger: GAACAAAGATGCTGCCATCAATTCCTTGCTGCAAAT...CAGTGAGATATGCTTCCCAGCCATATCCAGTGGGTCTCTAACCTCCTGTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | TCGCTTGACTCTGGGCTCTGTGATGAAGGTCTATCAACAAGAACAGCCCCTGGATCATGCCATAATTCTTaGCCAATTTTGCCTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLDSGLCDEGLSTRTAPGSCHNS*PILPVP Trigger: TGGTACAGGCAAAATTGGCAAAGAATTATGGCATGA...TCCAGGGGCTGTTCTTGTTGATAGACCTTCATCACAGAGCCCAGAGTCAAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCATGTTCACATACAACATCAGAAGAGGGAAGGAGCTTTTAGCTTGAAAATGTCCTGGATAGCTTaGAGGTCCTCTTCATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GAHVHIQHQKREGAFSLKMSWIA*RSSSLQ Trigger: CTGTAATGAAGAGGACCTCAAAGCTATCCAGGACAT...TTTCAAGCTAAAAGCTCCTTCCCTCTTCTGATGTTGTATGTGAACATGGGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | AATGTTCTTGCTAGTGTTACAGTCATGAGGAGGAAGGAAGGATGCTGCTCAGCCTCATGCCATAATTCTTaGCCAATTTTGCCTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: NVLASVTVMRRKEGCCSASCHNS*PILPVP Trigger: TGGTACAGGCAAAATTGGCAAAGAATTATGGCATGA...GGCTGAGCAGCATCCTTCCTTCCTCCTCATGACTGTAACACTAGCAAGAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055819.13 |
||
| CDS-3UTR CAA 90 bp | GTAACTCCATGCCATCCATCCATCAACTCAGAAGGATGCTGTACAATTTCTAGTATGTCCTGGATAGCTTaGAGGTCCTCTTCATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VTPCHPSINSEGCCTISSMSWIA*RSSSLQ Trigger: CTGTAATGAAGAGGACCTCAAAGCTATCCAGGACAT...ACTAGAAATTGTACAGCATCCTTCTGAGTTGATGGATGGATGGCATGGAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS-3UTR CAA 90 bp | GTCCACAGAGTATACTGCAGGTCAGTAGTGTCACAATGCTTGAATTTTAGTAGTACTTCCCTGTCCATGTaGGGAAACATGTCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: VHRVYCRSVVSQCLNFSSTSLSM*GNMSWI Trigger: TATCCAGGACATGTTTCCCAACATGGACAGGGAAGT...ACTACTAAAATTCAAGCATTGTGACACTACTGACCTGCAGTATACTCTGTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 |
||
| CDS CCA 72 bp | GTCCTCTTCATTACAGCGGGGCTGAGGAGCCACAGCTaGTGGGGGCATGGCCATCGGCACCATGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLFITAGLRSHS*WGHGHRHHARA Trigger: AGCCCTGGCATGGTGCCGATGGCCATGCCCCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGAAGAGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 72 bp | CGACCCACGGTACCAACTGTTCCTCCATACTGCAGCTaGTGGGCTGCCTGGGCATCCAGCTGGATCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTVPTVPPYCS*WAAWASSWICC Trigger: GCAGCAGATCCAGCTGGATGCCCAGGCAGCCCAGCAGCTGCAGTATGGAGGAACAGTTGGTACCGTGGGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 |
||
| CDS TCA 72 bp | TGGATAGCTTTGAGGTCCTCTTCATTACAGCGGGGCTaGGGAGCCACAGCTGGTGGGGGCATGGCCATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: WIALRSSSLQRG*GATAGGGMAIG Trigger: GCCGATGGCCATGCCCCCACCAGCTGTGGCTCCTCAGCCCCGCTGTAATGAAGAGGACCTCAAAGCTATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CCA 72 bp | TGCCTCCCACTCAGGCTATACCACTCGTCCTCCACTTaGCCCTGCTTCAGGGACTCGGGGATGGTGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLPLRLYHSSST*PCFRDSGMVMW Trigger: CCACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGGTATAGCCTGAGTGGGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS CAA 72 bp | CTGCCTCCCACTCAGGCTATACCACTCGTCCTCCACTaGGCCCTGCTTCAGGGACTCGGGGATGGTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPTQAIPLVLH*ALLQGLGDGDV Trigger: CACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGGTATAGCCTGAGTGGGAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
||
| CDS GCA 72 bp | CCACTCAGGCTATACCACTCGTCCTCCACTTGGCCCTaGTTCAGGGACTCGGGGATGGTGATGTGGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PLRLYHSSSTWP*FRDSGMVMWVQ Trigger: TTGGACCCACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGTGGAGGACGAGTGGTATAGCCTGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | TGCTGCTGTTGTGTGGGTGTTATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTACACCGGCCCGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CCCCVGVIRRKS*GSSPMYTGPRC Trigger: GCAGCGCGGGCCGGTGTACATTGGTGAACTCCCCCAGGACTTCCTCCGTATAACACCCACACAACAGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 |
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| CDS CCA 72 bp | ACTTGGCCCTGCTTCAGGGACTCGGGGATGGTGATGTaGGTCCAAGCTATGCGGTCATCCATGGAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: TWPCFRDSGMVM*VQAMRSSMEKA Trigger: CGCCTTCTCCATGGATGACCGCATAGCTTGGACCCACATCACCATCCCCGAGTCCCTGAAGCAGGGCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS GCA 72 bp | ATGACCAGGTTAATCATGCCCTCCTTGTCATCGCCCTaGCTCCCACTCAGGCTATACCACTCGTCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: MTRLIMPSLSSP*LPLRLYHSSST Trigger: AGTGGAGGACGAGTGGTATAGCCTGAGTGGGAGGCAGGGCGATGACAAGGAGGGCATGATTAACCTGGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | CAGGACCACAGGCTGAGGAGGCATCATCATGGCAGCTaGGAGGGACGTGTAGGACATGACCAGGTTAATCAT | + |
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Preference number: 6 (lower is better) Translates to: QDHRLRRHHHGS*EGRVGHDQVNH Trigger: ATGATTAACCTGGTCATGTCCTACACGTCCCTCCCAGCTGCCATGATGATGCCTCCTCAGCCTGTGGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | TGTTCCAGCGAGGGTTCTTGGCCCCATTGTGTGCTGTaGGAGTTTCATAAACAGCATAGCCCAGACGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: CSSEGSWPHCVL*EFHKQHSPDAD Trigger: GTCTGCGTCTGGGCTATGCTGTTTATGAAACTCCCACAGCACACAATGGGGCCAAGAACCCTCGCTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | AATGGGCACATAGCCAACACCCTGCTGGTACACAGTTaGCATCAGGACCACAGGCTGAGGAGGCATCATCAT | + |
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Preference number: 6 (lower is better) Translates to: NGHIANTLLVHS*HQDHRLRRHHH Trigger: ATGATGATGCCTCCTCAGCCTGTGGTCCTGATGCCAACTGTGTACCAGCAGGGTGTTGGCTATGTGCCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS GCA 72 bp | GACTTTGTTCCAGCGAGGGTTCTTGGCCCCATTGTGTaGTGTGGGAGTTTCATAAACAGCATAGCCCAGACG | + |
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Preference number: 6 (lower is better) Translates to: DFVPARVLGPIV*CGSFINSIAQT Trigger: CGTCTGGGCTATGCTGTTTATGAAACTCCCACAGCACACAATGGGGCCAAGAACCCTCGCTGGAACAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | CTCATCGAAGATCTCAAGGTAGAACGAGTCCACACCTaGGGGCACTGTGCACTGAATGACTTTGTTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LIEDLKVERVHT*GHCALNDFVPA Trigger: CGCTGGAACAAAGTCATTCAGTGCACAGTGCCCCCAGGTGTGGACTCGTTCTACCTTGAGATCTTCGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CCA 72 bp | TGCTGCTGTTGTGTGGGTGTTATACGGAGGAAGTCCTaGGGGAGTTCACCAATGTACACCTCAGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CCCCVGVIRRKS*GSSPMYTSESR Trigger: TCTGGATTCTGAGGTGTACATTGGTGAACTCCCCCAGGACTTCCTCCGTATAACACCCACACAACAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130439.3 |
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| CDS GCA 72 bp | GTCCATACGAGTCATGCCATAATTCTTTGCCAATTTTaGCTGTACCACAGTGATGCTGAGGCGACCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: VHTSHAIILCQF*LYHSDAEATHG Trigger: ACCGTGGGTCGCCTCAGCATCACTGTGGTACAGGCAAAATTGGCAAAGAATTATGGCATGACTCGTATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 |
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| CDS GCA 72 bp | CCAGACGCAGACGGCAGTAAGGGTCCATACGAGTCATaGCATAATTCTTTGCCAATTTTGCCTGTACCACAG | + |
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Preference number: 6 (lower is better) Translates to: PDADGSKGPYES*HNSLPILPVPQ Trigger: CTGTGGTACAGGCAAAATTGGCAAAGAATTATGGCATGACTCGTATGGACCCTTACTGCCGTCTGCGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 |
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| CDS CAA 90 bp | CCTCTCTGGGCTTCAAGCACAGAACGGATTACTTCCCTGTCCATGTaGGGAAACATGTCCTGGATAGCTTTGAGGTCCTCTTCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: PLWASSTERITSLSM*GNMSWIALRSSSLQ Trigger: CTGTAATGAAGAGGACCTCAAAGCTATCCAGGACATGTTTCCCAACATGGACAGGGAAGTAATCCGTTCTGTGCTTGAAGCCCAGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS GCA 72 bp | GCAGTAAGGGTCCATACGAGTCATGCCATAATTCTTTaGCAATTTTGCCTGTACCACAGTGATGCTGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: AVRVHTSHAIIL*QFCLYHSDAEA Trigger: CGCCTCAGCATCACTGTGGTACAGGCAAAATTGGCAAAGAATTATGGCATGACTCGTATGGACCCTTACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000055819.13 ENSMUST00000130439.3 |
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| CDS CAA 72 bp | GCTTCAAGCACAGAACGGATTACTTCCCTGTCCATGTaGGGAAACATGTCCTGGATAGCTTTGAGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASSTERITSLSM*GNMSWIALRSS Trigger: AGAGGACCTCAAAGCTATCCAGGACATGTTTCCCAACATGGACAGGGAAGTAATCCGTTCTGTGCTTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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| CDS CAA 72 bp | TCACCCATTTGCAGCAAGGAATTGATGGCAGCATCTTaGTTCCCTCTCTGGGCTTCAAGCACAGAACGGATT | + |
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Preference number: 6 (lower is better) Translates to: SPICSKELMAAS*FPLWASSTERI Trigger: AATCCGTTCTGTGCTTGAAGCCCAGAGAGGGAACAAAGATGCTGCCATCAATTCCTTGCTGCAAATGGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001950.12 ENSMUST00000130439.3 ENSMUST00000151890.3 |
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