Pregenerated sensors for TOE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028688Ensembl transcript IDs: ENSMUST00000030451.10, ENSMUST00000106455.8, ENSMUST00000145468.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGTCCCAGAGGACACCAGCCATAGGCCGAGAACTTGTCACAGATaGCAGTGGTACGAGAACGACGGCAGGTCCCAGGGGACATACAGC | + |
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Preference number: 1 (lower is better) Translates to: VVPEDTSHRPRTCHR*QWYENDGRSQGTYS Trigger: GCTGTATGTCCCCTGGGACCTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGGCCTATGGCTGGTGTCCTCTGGGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 90 bp | CCCGCTCATGCTAGATGGATAGCTGCAGAATTCCAGGGCAAGATGTaGGCTGCCAGCTGCCCGCTGCTTCCCATTCTCCCGCTCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: PAHARWIAAEFQGKM*AASCPLLPILPLTA Trigger: TGCAGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 90 bp | CCAGAGGACACCAGCCATAGGCCGAGAACTTGTCACAGATGCCAGTaGTACGAGAACGACGGCAGGTCCCAGGGGACATACAGCAGCGGT | + |
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Preference number: 1 (lower is better) Translates to: PEDTSHRPRTCHRCQ*YENDGRSQGTYSSG Trigger: ACCGCTGCTGTATGTCCCCTGGGACCTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGGCCTATGGCTGGTGTCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 90 bp | AGATGGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTCCCGCTCACTGCAACAGCGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: RWIAAEFQGKMWAAS*PLLPILPLTATAQE Trigger: TTCTTGCGCTGTTGCAGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 90 bp | AGGGGACATACAGCAGCGGTAGTCAATGTGCCCGCTCATGCTAGATaGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RGHTAAVVNVPAHAR*IAAEFQGKMWAASC Trigger: GCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGCGGGCACATTGACTACCGCTGCTGTATGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 90 bp | GTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTTaGCTCTGTAAAGACCTCTTCCGTTTGTCCTTACGTCGCCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VGGPSSASARVCVPG*LCKDLFRLSLRRRL Trigger: GAGACGGCGACGTAAGGACAAACGGAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR TCA 90 bp | TCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTaGTCCAGTGCCCTCTTCTGGCCTCTGCAGGCACTTAATTCACAG | + |
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Preference number: 1 (lower is better) Translates to: SSPILIFSMVARGLL*SSALFWPLQALNSQ Trigger: CTGTGAATTAAGTGCCTGCAGAGGCCAGAAGAGGGCACTGGATCACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR TCA 90 bp | TTCTGCCACAGCCTCATCAGTGTCAATTATAAGGTCAATATCGTGTaGCTGAGGACACTGTGGTCCCAGAGGACACCAGCCATAGGCCGA | + |
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Preference number: 1 (lower is better) Translates to: FCHSLISVNYKVNIV*LRTLWSQRTPAIGR Trigger: TCGGCCTATGGCTGGTGTCCTCTGGGACCACAGTGTCCTCAGTCACACGATATTGACCTTATAATTGACACTGATGAGGCTGTGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 90 bp | GTTCCATTTTCTCAGTCTCGAGGCTATCTTCACAGACCTGTTTTGTaGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: VPFSQSRGYLHRPVL*EDHLQLPQGSVSLV Trigger: AACCAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAGATAGCCTCGAGACTGAGAAAATGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 90 bp | GCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTaGCAGGACCTGCTCGACAACTCTGTAGCAGTTAAATGTGACATA | + |
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Preference number: 1 (lower is better) Translates to: ASESAKEDSTEVVSV*QDLLDNSVAVKCDI Trigger: TATGTCACATTTAACTGCTACAGAGTTGTCGAGCAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGTTCCAGGGCAAGATGTaGGCTGCCAGCTGCCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RPVLWEDHLQLPQGSVSLFQGKM*AASCPL Trigger: CAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAA...CAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CAA 90 bp | GCAAGGGTCTGTGTCCCTGGTTGGCTCTGTAAAGACCTCTTCCGTTaGTCCTTACGTCGCCGTCTCCGCCGCTTATCTTCTGCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: ARVCVPGWLCKDLFR*SLRRRLRRLSSATA Trigger: GGCTGTGGCAGAAGATAAGCGGCGGAGACGGCGACGTAAGGACAAACGGAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGGTCTGTGTCCCTGGTTGGCTCTGTAAAGACCTCTTCCGTTTGTCCTTAATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: ARVCVPGWLCKDLFRLSLMWAAS*PLLPIL Trigger: GAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACAT...TAAGGACAAACGGAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGCCGCCGCTTATCTTCTaGCACAGCCTCATCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RPVLWEDHLQLPQGSVSLPPLIF*HSLISV Trigger: GACACTGATGAGGCTGTGGCAGAAGATAAGCGGCGG...CAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTCCAGTGCCCTCTTCTaGCCTCTGCAGGCACTTAAT | + |
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Preference number: 2 (lower is better) Translates to: GCSSSPILIFSMVARGLLSSALF*PLQALN Trigger: ATTAAGTGCCTGCAGAGGCCAGAAGAGGGCACTGGA...CAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR-3UTR TCA 90 bp | TTACGTCGCCGTCTCCGCCGCTTATCTTCTGCCACAGCCTCATCAGTGTCAATTAAGGTCAATATCGTGTaGCTGAGGACACTGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LRRRLRRLSSATASSVSIKVNIV*LRTLWS Trigger: GGACCACAGTGTCCTCAGTCACACGATATTGACCTT...AATTGACACTGATGAGGCTGTGGCAGAAGATAAGCGGCGGAGACGGCGACGTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CAA 90 bp | TTTGTTCCATTTTCTCAGTCTCGAGGCTATCTTCACAGACCTGTTTaGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FVPFSQSRGYLHRPV*WEDHLQLPQGSVSL Trigger: CAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAGATAGCCTCGAGACTGAGAAAATGGAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCATCAGTTTTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCCCTTCTGTGATCCAGTaGCCTCTTCTGGCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GSSVLSTGCSSSPILIFSPSVIQ*PLLASA Trigger: TGCAGAGGCCAGAAGAGGGCACTGGATCACAGAAGG...GCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAAAACTGATGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCATCAGTTTTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCCCCTCTTCTGGCCTCTaGAGGCACTTAATTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: GSSVLSTGCSSSPILIFSPSSGL*RHLIHR Trigger: CCTGTGAATTAAGTGCCTGCAGAGGCCAGAAGAGGG...GCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAAAACTGATGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGCTTAGGTTCCTGGAATaGCCAACACAAGCCACTACA | + |
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Preference number: 2 (lower is better) Translates to: SESAKEDSTEVVSVCQDLLRFLE*PTQATT Trigger: TGTAGTGGCTTGTGTTGGTCATTCCAGGAACCTAAG...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| 3UTR-3UTR GCA 90 bp | CTCACCTTCTGCCACTTTTTGTTCCATTTTCTCAGTCTCGAGGCTATCTTCACACATTCTCCCGCTCACTaGAACAGCGCAAGAAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LTFCHFLFHFLSLEAIFTHSPAH*NSARRY Trigger: ATACCTTCTTGCGCTGTTGCAGTGAGCGGGAGAATG...TGTGAAGATAGCCTCGAGACTGAGAAAATGGAACAAAAAGTGGCAGAAGGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGCAAGCCACTACACTCTaGCAAACATCTCTTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SESAKEDSTEVVSVCQDLQATTL*QTSLLL Trigger: TAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTG...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| 3UTR GCA 72 bp | AATTCCAGGGCAAGATGTGGGCTGCCAGCTGCCCGCTaGTTCCCATTCTCCCGCTCACTGCAACAGCGCAAG | + |
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Preference number: 3 (lower is better) Translates to: NSRARCGLPAAR*FPFSRSLQQRK Trigger: CTTGCGCTGTTGCAGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 72 bp | GCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTCCCGCTCACTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: AAEFQGKMWAAS*PLLPILPLTAT Trigger: TGTTGCAGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 72 bp | TGCCAGCTGCCCGCTGCTTCCCATTCTCCCGCTCACTaGAACAGCGCAAGAAGGTATTGCTTCACTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: CQLPAASHSPAH*NSARRYCFTSI Trigger: TATGCTAGTGAAGCAATACCTTCTTGCGCTGTTGCAGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR-3UTR CAA 90 bp | AGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGAAAGACCTCTTCCGTTaGTCCTTACGTCGCCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: RPVLWEDHLQLPQGSVSLKDLFR*SLRRRL Trigger: GAGACGGCGACGTAAGGACAAACGGAAGAGGTCTTT...CAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 72 bp | CTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATaGTGGCTCGTGGCCTTCTGTGATCCAGTGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LVALLVPFSSSA*WLVAFCDPVPS Trigger: AGAGGGCACTGGATCACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR CCA 72 bp | ACAGCAGCGGTAGTCAATGTGCCCGCTCATGCTAGATaGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: TAAVVNVPAHAR*IAAEFQGKMWA Trigger: AGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGCGGGCACATTGACTACCGCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 72 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTaGCTCGTGGCCTTCTGTGATCCAGTGCCCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VALLVPFSSSAW*LVAFCDPVPSS Trigger: AGAAGAGGGCACTGGATCACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| 3UTR CCA 72 bp | CCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTTaGCTCTGTAAAGACCTCTTCCGTTTGTCCTTACGT | + |
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Preference number: 3 (lower is better) Translates to: PSSASARVCVPG*LCKDLFRLSLR Trigger: ACGTAAGGACAAACGGAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGCGGAAGCTGAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CCA 72 bp | TCTCAGTCTCGAGGCTATCTTCACAGACCTGTTTTGTaGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SQSRGYLHRPVL*EDHLQLPQGSV Trigger: CACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAGATAGCCTCGAGACTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR TCA 72 bp | AACAGTCCTCCTGCCTTAGCCCTTAGGTTCCTGGAATaGCCAACACAAGCCACTACACTCTGCCAAACATCT | + |
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Preference number: 3 (lower is better) Translates to: NSPPALALRFLE*PTQATTLCQTS Trigger: AGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGGTCATTCCAGGAACCTAAGGGCTAAGGCAGGAGGACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| 3UTR TCA 72 bp | AGCCTCATCAGTGTCAATTATAAGGTCAATATCGTGTaGCTGAGGACACTGTGGTCCCAGAGGACACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SLISVNYKVNIV*LRTLWSQRTPA Trigger: GGCTGGTGTCCTCTGGGACCACAGTGTCCTCAGTCACACGATATTGACCTTATAATTGACACTGATGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 72 bp | TTTGTCCTTACGTCGCCGTCTCCGCCGCTTATCTTCTaGCACAGCCTCATCAGTGTCAATTATAAGGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: FVLTSPSPPLIF*HSLISVNYKVN Trigger: ATTGACCTTATAATTGACACTGATGAGGCTGTGGCAGAAGATAAGCGGCGGAGACGGCGACGTAAGGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR GCA 72 bp | TCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTaGCAGGACCTGCTCGACAACTCTGTAGCAGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SAKEDSTEVVSV*QDLLDNSVAVK Trigger: TTTAACTGCTACAGAGTTGTCGAGCAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS-3UTR GCA 90 bp | CAGCATGGTGGCTCGTGGCCTTCTGTGATCCAGTGCCCTCTTCTGGCCTCTGCACCCTTATCTGGTTGCTaGCTGAAGCAGGCGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QHGGSWPSVIQCPLLASAPLSGC*LKQARP Trigger: GGGCCTCGCCTGCTTCAGGCAGCAACCAGATAAGGG...TGCAGAGGCCAGAAGAGGGCACTGGATCACAGAAGGCCACGAGCCACCATGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR GCA 90 bp | GGTCCCAGGGGACATACAGCAGCGGTAGTCAATGTGCCCGCTCATGCTAGATGGCCCTTATCTGGTTGCTaGCTGAAGCAGGCGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GPRGHTAAVVNVPAHARWPLSGC*LKQARP Trigger: GGGCCTCGCCTGCTTCAGGCAGCAACCAGATAAGGG...CCATCTAGCATGAGCGGGCACATTGACTACCGCTGCTGTATGTCCCCTGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR GCA 90 bp | GGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: GCSSSPILIFSMVARGLLMWAAS*PLLPIL Trigger: GAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACAT...CAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR CCA 90 bp | GGCCGAGAACTTGTCACAGATGCCAGTGGTACGAGAACGACGGCAGGTCCCAGGGTCATAGATGCCTGCTaGGAACATCTCACACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GRELVTDASGTRTTAGPRVIDAC*EHLTQV Trigger: GACCTGTGTGAGATGTTCCCAGCAGGCATCTATGAC...CCTGGGACCTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTTTCCAGGGCAAGATGTaGGCTGCCAGCTGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TGCSSSPILIFSMVARGLFQGKM*AASCPL Trigger: CAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAA...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTAGCGTCCGTACCGACTaGCTCTGGCTCTCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VALLVPFSSSAWWLVAFCSVRTD*LWLSSP Trigger: GGGAGATGAGAGCCAGAGCCAGTCGGTACGGACGCT...ACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR CCA 90 bp | TTCACAGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTAGCGTCCGTACCGACTaGCTCTGGCTCTCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FTDLFCGRTIFSFRKGLCSVRTD*LWLSSP Trigger: GGGAGATGAGAGCCAGAGCCAGTCGGTACGGACGCT...ACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR GCA 90 bp | GTGGTCCCAGAGGACACCAGCCATAGGCCGAGAACTTGTCACAGATGCCAGTGGCATCTCCCTTGTCATTaGCCTTATGGTAGGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: VVPEDTSHRPRTCHRCQWHLPCH*PYGRGY Trigger: GTATCCCCTACCATAAGGGCAATGACAAGGGAGATG...CCACTGGCATCTGTGACAAGTTCTCGGCCTATGGCTGGTGTCCTCTGGGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTTGGCTCTGTAGGTGTCATAGATGCCTaGTGGGAACATCTCACACAG | + |
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Preference number: 4 (lower is better) Translates to: WEDHLQLPQGSVSLVGSVGVIDA*WEHLTQ Trigger: CTGTGTGAGATGTTCCCAGCAGGCATCTATGACACC...TACAGAGCCAACCAGGGACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR GCA 90 bp | GGCCGAGAACTTGTCACAGATGCCAGTGGTACGAGAACGACGGCAGGTCCCAGGATTTGGTGTCATAGATaGCTGCTGGGAACATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GRELVTDASGTRTTAGPRIWCHR*LLGTSH Trigger: GTGAGATGTTCCCAGCAGGCATCTATGACACCAAAT...CCTGGGACCTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| 3UTR CAA 72 bp | TGTGTCCCTGGTTGGCTCTGTAAAGACCTCTTCCGTTaGTCCTTACGTCGCCGTCTCCGCCGCTTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CVPGWLCKDLFR*SLRRRLRRLSS Trigger: AGAAGATAAGCGGCGGAGACGGCGACGTAAGGACAAACGGAAGAGGTCTTTACAGAGCCAACCAGGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTCCCTGGAGCCAGGCTaGTCCCCAGCCTCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLSLEPG*SPASPS Trigger: AGAAGGTGAGGCTGGGGATCAGCCTGGCTCCAGGGA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS-3UTR TCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTCAGAGCTGCAGAGTTaGAGTCCCTGGCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASSELQS*SPWLRP Trigger: GGGCCTGAGCCAGGGACTTCAACTCTGCAGCTCTGA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTTCACCCTTATCTGGTTaGTGCCTGAAGCAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VALLVPFSSSAWWLVAFCSPLSG*CLKQAR Trigger: CCTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGA...ACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTTCACCCTTATCTGGTTaGTGCCTGAAGCAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTDLFCGRTIFSFRKGLCSPLSG*CLKQAR Trigger: CCTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGA...ACACAGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCCATTCTCCCGCTCACTGCAACAGCGCAAGAAGGTATTGCTTCACTATACCCTGGGCGTACTaGCGGTTGAAGTTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AASHSPAHCNSARRYCFTIPWAY*RLKLKP Trigger: TGGCTTCAACTTCAACCGGCAGTACGCCCAGGGTAT...AGTGAAGCAATACCTTCTTGCGCTGTTGCAGTGAGCGGGAGAATGGGAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGGGACATACAGCAGCGGTAGTCAATGTGCCCGCTCATGCTAGATGGCGTTCCTCAATGCACTaGTTCAGCAAACTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPRGHTAAVVNVPAHARWRSSMH*FSKLFL Trigger: TAGGAAGAGTTTGCTGAACCAGTGCATTGAGGAACG...CCATCTAGCATGAGCGGGCACATTGACTACCGCTGCTGTATGTCCCCTGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR CCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGGACAGAACGGGTCCTaGCAGCATGACACACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASGQNGS*QHDTRP Trigger: AGGCCGTGTGTCATGCTGCCAGGACCCGTTCTGTCC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGACAGAACGGGTCCTaGCAGCATGACACACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCSSSPILIFSMVARGQNGS*QHDTRP Trigger: AGGCCGTGTGTCATGCTGCCAGGACCCGTTCTGTCC...ACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTAGCGTCCGTACCGACTaGCTCTGGCTCTCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASSVRTD*LWLSSP Trigger: GGGAGATGAGAGCCAGAGCCAGTCGGTACGGACGCT...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR TCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTATCTGGTTGCTGCCTaGAGCAGGCGAGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVYLVAA*SRRGPG Trigger: CCCTGGGCCTCGCCTGCTTCAGGCAGCAACCAGATA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGCCCTTATCTGGTTGCTaGCTGAAGCAGGCGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLPLSGC*LKQARP Trigger: GGGCCTCGCCTGCTTCAGGCAGCAACCAGATAAGGG...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTATACCCTGGGCGTACTaGCGGTTGAAGTTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCSSSPILIFSMVARGLIPWAY*RLKLKP Trigger: TGGCTTCAACTTCAACCGGCAGTACGCCCAGGGTAT...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCCTGCCAGCTGCCCGCTaGTTCCCATTCTCCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVLPAAR*FPFSRS Trigger: TGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAG...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLMWAAS*PLLPIL Trigger: GAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACAT...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTCAAAACCAGCACGATaGAGTCCGTCCCCAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASSKPAR*SPSPGT Trigger: CGTGCCTGGGGACGGACTGCATCGTGCTGGTTTTGA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTTCCAGGGCAAGATGTaGGCTGCCAGCTGCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVFQGKM*AASCPL Trigger: CAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTCCAAGCTACTTGTGTaGCCTTCCCTGGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLSKLLV*PSLEPG Trigger: GCCTGGCTCCAGGGAAGGTCACACAAGTAGCTTGGA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | GCTCATGCTAGATGGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTGCTGTACCAGGAACTaGACAGACTTCGGTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: AHARWIAAEFQGKMWAASCCTRN*TDFGSI Trigger: TATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCA...GCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTGGTGTCATAGATGCCTaGTGGGAACATCTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VALLVPFSSSAWWLVAFCGVIDA*WEHLTQ Trigger: CTGTGTGAGATGTTCCCAGCAGGCATCTATGACACC...ACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTCCGCCGCTTATCTTCTaGCACAGCCTCATCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASPPLIF*HSLISV Trigger: GACACTGATGAGGCTGTGGCAGAAGATAAGCGGCGG...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGCCAAGGTTCAGAGCTaGAGAGTTGAAGTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASAKVQS*RVEVPG Trigger: GCCAGGGACTTCAACTCTGCAGCTCTGAACCTTGGC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTTGGCTCTGTAAAGACCTCTTCATTTTCACCCTTATCTaGTTGCTGCCTGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASARVCVPGWLCKDLFIFTLI*LLPEAG Trigger: GCCTGCTTCAGGCAGCAACCAGATAAGGGTGAAAAT...GAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGCGGAAGCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTGTCATAGATGCCTGCTaGGAACATCTCACACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGCSSSPILIFSMVARGLVIDAC*EHLTQV Trigger: GACCTGTGTGAGATGTTCCCAGCAGGCATCTATGAC...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTTGTGTGACCTTCCCTaGAGCCAGGCTGATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLLCDLP*SQADPQ Trigger: CTGGGGATCAGCCTGGCTCCAGGGAAGGTCACACAA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGGGTTAGTGCTGGCTTaGTTCACCAGCAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASGLVLA*FTSSSE Trigger: CTCAGAGCTGCTGGTGAACCAAGCCAGCACTAACCC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTCACCCTTATCTGGTTaGTGCCTGAAGCAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLSPLSG*CLKQAR Trigger: CCTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTATACCCTGGGCGTACTaGCGGTTGAAGTTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASIPWAY*RLKLKP Trigger: TGGCTTCAACTTCAACCGGCAGTACGCCCAGGGTAT...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTGATCCACATCTCCCTTGTCATTaGCCTTATGGTAGGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVPFSSSAWWLVAFCDPHLPCH*PYGRGY Trigger: GTATCCCCTACCATAAGGGCAATGACAAGGGAGATG...TGGATCACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS-3UTR CCA 90 bp | GGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGCGTTCCTCAATGCACTaGTTCAGCAAACTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GCSSSPILIFSMVARGLLRSSMH*FSKLFL Trigger: TAGGAAGAGTTTGCTGAACCAGTGCATTGAGGAACG...CAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTCTGGTTGTGGGCTTTaGATGGACGGGAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASSGCGL*MDGKTG Trigger: GCCAGTTTTCCCGTCCATCCAAAGCCCACAACCAGA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| 3UTR CAA 72 bp | TTTTCTCAGTCTCGAGGCTATCTTCACAGACCTGTTTaGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSRGYLHRPV*WEDHLQLPQGS Trigger: AGACCCTTGCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAGATAGCCTCGAGACTGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR TCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTCAATATCGTGTGACTaGGGACACTGTGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASSISCD*GHCGPR Trigger: TCTGGGACCACAGTGTCCTCAGTCACACGATATTGA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR TCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTAAGGTCAATATCGTGTaGCTGAGGACACTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASKVNIV*LRTLWS Trigger: GGACCACAGTGTCCTCAGTCACACGATATTGACCTT...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGTTGGCTCTGTAAAGACCTCTTCTGTAACGTTCCTCAATaGACTGGTTCAGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSASARVCVPGWLCKDLFCNVPQ*TGSANS Trigger: AGAGTTTGCTGAACCAGTGCATTGAGGAACGTTACA...GAAGAGGTCTTTACAGAGCCAACCAGGGACACAGACCCTTGCGGAAGCTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTTGCTGTACCAGGAACTaGACAGACTTCGGTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: TGCSSSPILIFSMVARGLCCTRN*TDFGSI Trigger: TATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCA...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGCCCGCTCATGCTAGATGGATAGCTGCAGAATTCCAGGGCAAGATGTGGTTGAAGTTGAAGCCATaGTGTACCAGGAACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NVPAHARWIAAEFQGKMWLKLKP*CTRNCT Trigger: TGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAA...CCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGCGGGCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGGTGTCATAGATGCCTaGTGGGAACATCTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASGVIDA*WEHLTQ Trigger: CTGTGTGAGATGTTCCCAGCAGGCATCTATGACACC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTATTTGGTGTCATAGATaGCTGCTGGGAACATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGCSSSPILIFSMVARGLIWCHR*LLGTSH Trigger: GTGAGATGTTCCCAGCAGGCATCTATGACACCAAAT...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGGAGAAGGCTCTGCCAGCTGCCCGCTaGTTCCCATTCTCCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVGILFISGLKTKCREKALPAAR*FPFSRS Trigger: TGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAG...AGCCTTCTCCCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTAACCTGCTTCTTGTGTaGGAGAACTTGTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VALLVPFSSSAWWLVAFCNLLLV*ENLSQM Trigger: CATCTGTGACAAGTTCTCGCACACAAGAAGCAGGTT...ACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGTCATAGATGCCTGCTaGGAACATCTCACACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASVIDAC*EHLTQV Trigger: GACCTGTGTGAGATGTTCCCAGCAGGCATCTATGAC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR TCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCGTTGTGTGTTTTTGTTaGCACCACCGTCAGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVVVCFC*HHRQRA Trigger: CGCCCTCTGACGGTGGTGTCAACAAAAACACACAAC...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTATGGCCATATCTCCTTaGAGTTGTCACTCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCSSSPILIFSMVARMAISP*SCHSAR Trigger: ACGTGCAGAGTGACAACTTCAAGGAGATATGGCCAT...ACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCAACCACAAACTCCTCTaGAGGTTGTGTGTTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVALLVPFSSSAWWLVAFNHKLL*RLCVFV Trigger: AACAAAAACACACAACCTGCAGAGGAGTTTGTGGTT...GAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGGTCTGTGTCCCTGGTTaGCTCTGTAAAGACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLVCVPG*LCKDLF Trigger: GAAGAGGTCTTTACAGAGCCAACCAGGGACACAGAC...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTGCTGTACCAGGAACTaGACAGACTTCGGTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASCCTRN*TDFGSI Trigger: TATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCATCAGTTTTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATTTTCACCCTTATCTaGTTGCTGCCTGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSVLSTGCSSSPILIFSIFTLI*LLPEAG Trigger: GCCTGCTTCAGGCAGCAACCAGATAAGGGTGAAAAT...GCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAAAACTGATGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCATGGCCATATCTCCTTaGAGTTGTCACTCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVMAISP*SCHSAR Trigger: ACGTGCAGAGTGACAACTTCAAGGAGATATGGCCAT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTTGAAGTTGAAGCCATaGTGTACCAGGAACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SESAKEDSTEVVSVCQDLLKLKP*CTRNCT Trigger: TGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCCATCTCCCTTGTCATTaGCCTTATGGTAGGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVHLPCH*PYGRGY Trigger: GTATCCCCTACCATAAGGGCAATGACAAGGGAGATG...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCATTTTCACCCTTATCTaGTTGCTGCCTGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVIFTLI*LLPEAG Trigger: GCCTGCTTCAGGCAGCAACCAGATAAGGGTGAAAAT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCCACAGACCTGTTTTGTaGGAGGACCATCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVHRPVL*EDHLQL Trigger: AAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTG...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGGAGAAGGCTGTTGTGTGTTTTTGTTaGCACCACCGTCAGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVGILFISGLKTKCREKAVVCFC*HHRQRA Trigger: CGCCCTCTGACGGTGGTGTCAACAAAAACACACAAC...AGCCTTCTCCCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTAACCACAAACTCCTCTaGAGGTTGTGTGTTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQATTLCQTSLLLLFASNHKLL*RLCVFV Trigger: AACAAAAACACACAACCTGCAGAGGAGTTTGTGGTT...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCATTTGGTGTCATAGATaGCTGCTGGGAACATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVIWCHR*LLGTSH Trigger: GTGAGATGTTCCCAGCAGGCATCTATGACACCAAAT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCCGTTCCTCAATGCACTaGTTCAGCAAACTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVRSSMH*FSKLFL Trigger: TAGGAAGAGTTTGCTGAACCAGTGCATTGAGGAACG...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTGTAACGTTCCTCAATaGACTGGTTCAGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LICTQASESAKEDSTEVVCNVPQ*TGSANS Trigger: AGAGTTTGCTGAACCAGTGCATTGAGGAACGTTACA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGGAGAAGGCTTGTAACGTTCCTCAATaGACTGGTTCAGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGILFISGLKTKCREKACNVPQ*TGSANS Trigger: AGAGTTTGCTGAACCAGTGCATTGAGGAACGTTACA...AGCCTTCTCCCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR GCA 90 bp | CCTAATATGACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGTTGAAGTTGAAGCCATaGTGTACCAGGAACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PNMTVGILFISGLKTKCRLKLKP*CTRNCT Trigger: TGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAA...CCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGTCATATTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS CCA 90 bp | CCCGCTCATGCTAGATGGATAGCTGCAGAATTCCAGGGCAAGATGTaGGCTGCCAGCTGCCCGCTGCTTCCCATTCTCCCGCTCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: PAHARWIAAEFQGKM*AASCPLLPILPLTF Trigger: AAATGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
||
| CDS GCA 90 bp | AGATGGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTCCCGCTCACATTTCCGGAAAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: RWIAAEFQGKMWAAS*PLLPILPLTFPESV Trigger: TACGCTTTCCGGAAATGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATGCTAGATGGATAGCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTGGGCGTACTGCCGGTaGAAGTTGAAGCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHARWIAAEFQGKMWAASWAYCR*KLKPCC Trigger: ACAGCATGGCTTCAACTTCAACCGGCAGTACGCCCA...GCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGCTATCCATCTAGCATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS CCA 90 bp | TCGGGCATGGAACTCGGCGGCATATTTGGTGTCATAGATGCCTGCTaGGAACATCTCACACAGGTCAGCAGTGAAGGTCCCCAAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGMELGGIFGVIDAC*EHLTQVSSEGPQVL Trigger: GAGAACTTGGGGACCTTCACTGCTGACCTGTGTGAGATGTTCCCAGCAGGCATCTATGACACCAAATATGCCGCCGAGTTCCATGCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTCACCGTCAGAGGGCGTaGGAACTGGAGGCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VALLVPFSSSAWWLVAFCHRQRA*ELEAHH Trigger: ATGATGTGCCTCCAGTTCCAACGCCCTCTGACGGTG...ACAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCTGTTCACCCTTATCTGGTaGCTGCCTGAAGCAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCSSSPILIFSMVARGLLFTLIW*LPEAGE Trigger: CTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGAA...CAGAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | CTCGAGGCTATCTTCACAGACCTGTTTTGTGGGAGGACCATCTTCAGCTTCCGCTTCACCCTTATCTGGTaGCTGCCTGAAGCAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEAIFTDLFCGRTIFSFRFTLIW*LPEAGE Trigger: CTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGAA...GCGGAAGCTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAGATAGCCTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS TCA 90 bp | TGGTGTCATAGATGCCTGCTGGGAACATCTCACACAGGTCAGCAGTaGAGGTCCCCAAGTTCTCAGGCAGGTGCGCGTAGAAATTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WCHRCLLGTSHTGQQ*RSPSSQAGARRNSG Trigger: ACCAGAATTTCTACGCGCACCTGCCTGAGAACTTGGGGACCTTCACTGCTGACCTGTGTGAGATGTTCCCAGCAGGCATCTATGACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
||
| CDS CCA 90 bp | TTGTCCTCCTATGTGCCATCTCCAAGCTACTTGTGTGACCTTCCCTaGAGCCAGGCTGATCCCCAGCCTCACCTTCTGCCACTTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSYVPSPSYLCDLP*SQADPQPHLLPLFV Trigger: AACAAAAAGTGGCAGAAGGTGAGGCTGGGGATCAGCCTGGCTCCAGGGAAGGTCACACAAGTAGCTTGGAGATGGCACATAGGAGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTCGGTTGTGTGTTTTTGTaGACACCACCGTCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVALLVPFSSSAWWLVAFGCVFL*TPPSEG Trigger: GCCCTCTGACGGTGGTGTCAACAAAAACACACAACC...GAAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS GCA 90 bp | AAATCGGGCATGGAACTCGGCGGCATATTTGGTGTCATAGATGCCTaGTGGGAACATCTCACACAGGTCAGCAGTGAAGGTCCCCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSGMELGGIFGVIDA*WEHLTQVSSEGPQV Trigger: AACTTGGGGACCTTCACTGCTGACCTGTGTGAGATGTTCCCAGCAGGCATCTATGACACCAAATATGCCGCCGAGTTCCATGCCCGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS-3UTR CAA 90 bp | CTTCCCATTCTCCCGCTCACTGCAACAGCGCAAGAAGGTATTGCTTCACTAGCATACTGCCGGTTGAAGTaGAAGCCATGCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPILPLTATAQEGIASLAYCRLK*KPCCTR Trigger: CCTGGTACAGCATGGCTTCAACTTCAACCGGCAGTA...TGCTAGTGAAGCAATACCTTCTTGCGCTGTTGCAGTGAGCGGGAGAATGGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
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| CDS GCA 90 bp | AAGGCTAGCAAGAGTGATGGCCATATCTCCTTGAAGTTGTCACTCTaGACGTCTACCACAGGAACCCGAACCACAAACTCCTCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KASKSDGHISLKLSL*TSTTGTRTTNSSAG Trigger: ACCTGCAGAGGAGTTTGTGGTTCGGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
||
| CDS GCA 90 bp | TGGGCGTACTGCCGGTTGAAGTTGAAGCCATGCTGTACCAGGAACTaGACAGACTTCGGTTCTATAACGTACTCCTCTATGCATAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAYCRLKLKPCCTRN*TDFGSITYSSMHSR Trigger: CCTGCTATGCATAGAGGAGTACGTTATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAACCGGCAGTACGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS GCA 90 bp | AAGATGGTAGTCTCCCATAACTGTCCTGTGAACCTGCTTCTTGTGTaGGAGAACTTGTCACAGATGCCAGTGGTACGAGAACGACGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KMVVSHNCPVNLLLV*ENLSQMPVVRERRQ Trigger: CTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGCACACAAGAAGCAGGTTCACAGGACAGTTATGGGAGACTACCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGCACCGTCAGAGGGCGTaGGAACTGGAGGCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SESAKEDSTEVVSVCQDLHRQRA*ELEAHH Trigger: ATGATGTGCCTCCAGTTCCAACGCCCTCTGACGGTG...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCATGGTGGCTCGTGGCCTTGATGGCCATATCTCCTaGAAGTTGTCACTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TGCSSSPILIFSMVARGLDGHIS*KLSLCT Trigger: CGTGCAGAGTGACAACTTCAAGGAGATATGGCCATC...AAGGCCACGAGCCACCATGCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTGGTTGTGTGTTTTTGTaGACACCACCGTCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTQATTLCQTSLLLLFASGCVFL*TPPSEG Trigger: GCCCTCTGACGGTGGTGTCAACAAAAACACACAACC...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATAGGCCGAGAACTTGTCACAGATGCCAGTGGTACGAGAACGACGGCAGGTGAGATTGAACACTaGAGCCAAGTAAGAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAIGRELVTDASGTRTTAGEIEH*SQVRIF Trigger: GAAAATTCTTACTTGGCTCAAGTGTTCAATCTCACC...TGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGGCCTATGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145468.2 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTTCAGAGCTGCAGAGTaGAAGTCCCTGGCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVFRAAE*KSLAQA Trigger: GGCCTGAGCCAGGGACTTCAACTCTGCAGCTCTGAA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTTCTGGTTGTGGGCTTaGGATGGACGGGAAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTQATTLCQTSLLLLFASFWLWA*DGRENW Trigger: CCAGTTTTCCCGTCCATCCAAAGCCCACAACCAGAA...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTTCACCCTTATCTGGTaGCTGCCTGAAGCAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVFTLIW*LPEAGE Trigger: CTCGCCTGCTTCAGGCAGCAACCAGATAAGGGTGAA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGTACTGCCGGTTGAAGTaGAAGCCATGCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SESAKEDSTEVVSVCQDLYCRLK*KPCCTR Trigger: CCTGGTACAGCATGGCTTCAACTTCAACCGGCAGTA...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCATCAGTTTTGAGTACTGGTTGCTCTTCTAGTCCCATTCTCATCTTCAGCTACTGCCGGTTGAAGTaGAAGCCATGCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSVLSTGCSSSPILIFSYCRLK*KPCCTR Trigger: CCTGGTACAGCATGGCTTCAACTTCAACCGGCAGTA...GCTGAAGATGAGAATGGGACTAGAAGAGCAACCAGTACTCAAAACTGATGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCTGGGCGTACTGCCGGTaGAAGTTGAAGCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVWAYCR*KLKPCC Trigger: ACAGCATGGCTTCAACTTCAACCGGCAGTACGCCCA...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CCAACACAAGCCACTACACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTCTTCACAGACCTGTTTaGTGGGAGGACCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTQATTLCQTSLLLLFASLHRPV*WEDHLQ Trigger: CTGAAGATGGTCCTCCCACAAAACAGGTCTGTGAAG...AGAAGCGAAGAGTAGGAGAAGAGATGTTTGGCAGAGTGTAGTGGCTTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAAAGACCTCTTCCGTTaGTCCTTACGTCGCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVKDLFR*SLRRRL Trigger: GAGACGGCGACGTAAGGACAAACGGAAGAGGTCTTT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCGATGGCCATATCTCCTaGAAGTTGTCACTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVDGHIS*KLSLCT Trigger: CGTGCAGAGTGACAACTTCAAGGAGATATGGCCATC...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGCTTCATTTTCTGGTaGTGGGCTTTGGATGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVSFIFW*WALDGR Trigger: CCGTCCATCCAAAGCCCACAACCAGAAAATGAAGCT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGGAGAAGGCTTGGGCGTACTGCCGGTaGAAGTTGAAGCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVGILFISGLKTKCREKAWAYCR*KLKPCC Trigger: ACAGCATGGCTTCAACTTCAACCGGCAGTACGCCCA...AGCCTTCTCCCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGTACCCAGGCCTCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAAACTCCTCTGCAGGTaGTGTGTTTTTGTTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LICTQASESAKEDSTEVVKLLCR*CVFVDT Trigger: GGTGTCAACAAAAACACACAACCTGCAGAGGAGTTT...GACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGAGGCCTGGGTACAAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCTGCAAAAGAAGACAGTACTGAAGTAGTCAGTGTTTGCCAGGACCTGGGTGAGATTGAACACTaGAGCCAAGTAAGAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SESAKEDSTEVVSVCQDLGEIEH*SQVRIF Trigger: GAAAATTCTTACTTGGCTCAAGTGTTCAATCTCACC...CAGGTCCTGGCAAACACTGACTACTTCAGTACTGTCTTCTTTTGCAGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
||
| CDS-3UTR CAA 90 bp | CCTAATATGACAGTAGGGATTCTATTTATCAGTGGGCTTAAAACAAAATGTAGGGGTGAGATTGAACACTaGAGCCAAGTAAGAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNMTVGILFISGLKTKCRGEIEH*SQVRIF Trigger: GAAAATTCTTACTTGGCTCAAGTGTTCAATCTCACC...CCTACATTTTGTTTTAAGCCCACTGATAAATAGAATCCCTACTGTCATATTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
||
| CDS GCA 72 bp | GCTGCAGAATTCCAGGGCAAGATGTGGGCTGCCAGCTaGCCGCTGCTTCCCATTCTCCCGCTCACATTTCCG | + |
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Preference number: 6 (lower is better) Translates to: AAEFQGKMWAAS*PLLPILPLTFP Trigger: CGGAAATGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATTCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS GCA 72 bp | AATTCCAGGGCAAGATGTGGGCTGCCAGCTGCCCGCTaGTTCCCATTCTCCCGCTCACATTTCCGGAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: NSRARCGLPAAR*FPFSRSHFRKA Trigger: CGCTTTCCGGAAATGTGAGCGGGAGAATGGGAAGCAGCGGGCAGCTGGCAGCCCACATCTTGCCCTGGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS CCA 72 bp | TATGTGCCATCTCCAAGCTACTTGTGTGACCTTCCCTaGAGCCAGGCTGATCCCCAGCCTCACCTTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: YVPSPSYLCDLP*SQADPQPHLLP Trigger: TGGCAGAAGGTGAGGCTGGGGATCAGCCTGGCTCCAGGGAAGGTCACACAAGTAGCTTGGAGATGGCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS CAA 72 bp | CAGCACTTGTCCTCCTATGTGCCATCTCCAAGCTACTaGTGTGACCTTCCCTGGAGCCAGGCTGATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QHLSSYVPSPSY*CDLPWSQADPQ Trigger: CTGGGGATCAGCCTGGCTCCAGGGAAGGTCACACAAGTAGCTTGGAGATGGCACATAGGAGGACAAGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS CAA 90 bp | GTCTCCCATAACTGTCCTGTGAACCTGCTTCTTGTGTGCGAGAACTaGTCACAGATGCCAGTGGTACGAGAACGACGGCAGGTCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VSHNCPVNLLLVCEN*SQMPVVRERRQVPG Trigger: CCCTGGGACCTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGCACACAAGAAGCAGGTTCACAGGACAGTTATGGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS CAA 90 bp | GGTTCACCAGCAGCTCTGAGGTGGCCACATCAGCTGTTTCAGCACTaGTCCTCCTATGTGCCATCTCCAAGCTACTTGTGTGACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSPAALRWPHQLFQH*SSYVPSPSYLCDLP Trigger: GGGAAGGTCACACAAGTAGCTTGGAGATGGCACATAGGAGGACAAGTGCTGAAACAGCTGATGTGGCCACCTCAGAGCTGCTGGTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS CCA 72 bp | GAACTCGGCGGCATATTTGGTGTCATAGATGCCTGCTaGGAACATCTCACACAGGTCAGCAGTGAAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ELGGIFGVIDAC*EHLTQVSSEGP Trigger: GGGACCTTCACTGCTGACCTGTGTGAGATGTTCCCAGCAGGCATCTATGACACCAAATATGCCGCCGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS TCA 72 bp | GAACCACAAACTCCTCTGCAGGTTGTGTGTTTTTGTTaGCACCACCGTCAGAGGGCGTTGGAACTGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: EPQTPLQVVCFC*HHRQRALELEA Trigger: TGCCTCCAGTTCCAACGCCCTCTGACGGTGGTGTCAACAAAAACACACAACCTGCAGAGGAGTTTGTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS GCA 72 bp | GGCCACATCAGCTGTTTCAGCACTTGTCCTCCTATGTaGCATCTCCAAGCTACTTGTGTGACCTTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GHISCFSTCPPM*HLQATCVTFPG Trigger: TCCAGGGAAGGTCACACAAGTAGCTTGGAGATGGCACATAGGAGGACAAGTGCTGAAACAGCTGATGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030451.10 |
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| CDS CAA 72 bp | TACCACAGGAACCCGAACCACAAACTCCTCTGCAGGTaGTGTGTTTTTGTTGACACCACCGTCAGAGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: YHRNPNHKLLCR*CVFVDTTVRGR Trigger: ACGCCCTCTGACGGTGGTGTCAACAAAAACACACAACCTGCAGAGGAGTTTGTGGTTCGGGTTCCTGTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS CAA 72 bp | AACTGTCCTGTGAACCTGCTTCTTGTGTGCGAGAACTaGTCACAGATGCCAGTGGTACGAGAACGACGGCAG | + |
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Preference number: 6 (lower is better) Translates to: NCPVNLLLVCEN*SQMPVVRERRQ Trigger: CTGCCGTCGTTCTCGTACCACTGGCATCTGTGACAAGTTCTCGCACACAAGAAGCAGGTTCACAGGACAGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS GCA 72 bp | ATACCCTGGGCGTACTGCCGGTTGAAGTTGAAGCCATaGTGTACCAGGAACTGCACAGACTTCGGTTCTATA | + |
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Preference number: 6 (lower is better) Translates to: IPWAYCRLKLKP*CTRNCTDFGSI Trigger: TATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAACCGGCAGTACGCCCAGGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS GCA 72 bp | ATGGAACTCGGCGGCATATTTGGTGTCATAGATGCCTaGTGGGAACATCTCACACAGGTCAGCAGTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: MELGGIFGVIDA*WEHLTQVSSEG Trigger: ACCTTCACTGCTGACCTGTGTGAGATGTTCCCAGCAGGCATCTATGACACCAAATATGCCGCCGAGTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS CAA 72 bp | AAGGCTAGCAAGAGTGATGGCCATATCTCCTTGAAGTaGTCACTCTGCACGTCTACCACAGGAACCCGAACC | + |
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Preference number: 6 (lower is better) Translates to: KASKSDGHISLK*SLCTSTTGTRT Trigger: GGTTCGGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS CAA 90 bp | GCTGTCTTTAAGGCTAGCAAGAGTGATGGCCATATCTCCTTGAAGTaGTCACTCTGCACGTCTACCACAGGAACCCGAACCACAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: AVFKASKSDGHISLK*SLCTSTTGTRTTNS Trigger: GGAGTTTGTGGTTCGGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTTAAAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS GCA 72 bp | AAGAGTGATGGCCATATCTCCTTGAAGTTGTCACTCTaGACGTCTACCACAGGAACCCGAACCACAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: KSDGHISLKLSL*TSTTGTRTTNS Trigger: GGAGTTTGTGGTTCGGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS GCA 72 bp | GTCTCCCATAACTGTCCTGTGAACCTGCTTCTTGTGTaGGAGAACTTGTCACAGATGCCAGTGGTACGAGAA | + |
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Preference number: 6 (lower is better) Translates to: VSHNCPVNLLLV*ENLSQMPVVRE Trigger: TTCTCGTACCACTGGCATCTGTGACAAGTTCTCGCACACAAGAAGCAGGTTCACAGGACAGTTATGGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106455.8 |
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| CDS CAA 90 bp | AAGCTAGCTGTCTTTAAGGCTAGCAAGAGTGATGGCCATATCTCCTaGAAGTTGTCACTCTGCACGTCTACCACAGGAACCCGAACCACA | + |
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Preference number: 6 (lower is better) Translates to: KLAVFKASKSDGHIS*KLSLCTSTTGTRTT Trigger: TGTGGTTCGGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTTAAAGACAGCTAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS TCA 72 bp | TCTTTAAGGCTAGCAAGAGTGATGGCCATATCTCCTTaGAGTTGTCACTCTGCACGTCTACCACAGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: SLRLARVMAISP*SCHSARLPQEP Trigger: GGGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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| CDS GCA 72 bp | TGCCGGTTGAAGTTGAAGCCATGCTGTACCAGGAACTaGACAGACTTCGGTTCTATAACGTACTCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: CRLKLKPCCTRN*TDFGSITYSSM Trigger: CATAGAGGAGTACGTTATAGAACCGAAGTCTGTGCAGTTCCTGGTACAGCATGGCTTCAACTTCAACCGGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 ENSMUST00000145468.2 |
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| CDS CAA 72 bp | GTCTTTAAGGCTAGCAAGAGTGATGGCCATATCTCCTaGAAGTTGTCACTCTGCACGTCTACCACAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: VFKASKSDGHIS*KLSLCTSTTGT Trigger: GGTTCCTGTGGTAGACGTGCAGAGTGACAACTTCAAGGAGATATGGCCATCACTCTTGCTAGCCTTAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030451.10 ENSMUST00000106455.8 |
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