Pregenerated sensors for TOB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048546Ensembl transcript IDs: ENSMUST00000050467.9
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCTCAGGGAAAGGCTGTGCTGGAGAAAGAGGCTGCATGTATCTaGTCCAGGCCAAGAGCGGGTGAGGGATGGGGCCACAGGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: QAQGKAVLEKEAACI*SRPRAGEGWGHRTE Trigger: CTCTGTCCTGTGGCCCCATCCCTCACCCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 90 bp | GCAGGTGATAGAACCCAGGACCCATCTACAGAGGGAAGACCCGCGTaGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCACA | + |
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Preference number: 1 (lower is better) Translates to: AGDRTQDPSTEGRPA*LGIPEDTTASHTLT Trigger: TGTGAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGGGTCCTGGGTTCTATCACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR GCA 90 bp | CCACCCTCTAAACTCTGCCCTAACCTCAGGCTCAGGGAAAGGCTGTaGTGGAGAAAGAGGCTGCATGTATCTGGTCCAGGCCAAGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: PPSKLCPNLRLRERL*WRKRLHVSGPGQER Trigger: CCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTGAGGTTAGGGCAGAGTTTAGAGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 90 bp | CCCTCTAAACTCTGCCCTAACCTCAGGCTCAGGGAAAGGCTGTGCTaGAGAAAGAGGCTGCATGTATCTGGTCCAGGCCAAGAGCGGGTG | + |
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Preference number: 1 (lower is better) Translates to: PSKLCPNLRLRERLC*RKRLHVSGPGQERV Trigger: CACCCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTGAGGTTAGGGCAGAGTTTAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 90 bp | TGTGCACAGGAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTaGGGGCAGCCAAAAAGCACTGCTTCAGCTGAAGGCTCAGGACTG | + |
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Preference number: 1 (lower is better) Translates to: CAQEILRASRSSSAR*GQPKSTASAEGSGL Trigger: CAGTCCTGAGCCTTCAGCTGAAGCAGTGCTTTTTGGCTGCCCTCACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 90 bp | GCTGGAGAAAGAGGCTGCATGTATCTGGTCCAGGCCAAGAGCGGGTaGGGGATGGGGCCACAGGACAGAGAAGAATTCCAATTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: AGERGCMYLVQAKSG*GMGPQDREEFQLEK Trigger: TTTTTCTAATTGGAATTCTTCTCTGTCCTGTGGCCCCATCCCTCACCCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCGGGGAGGGTGTCAAGTaGCCAGTCAGCAGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GRPAWLGIPEDTTASHTLGEGVK*PVSSFL Trigger: CAGGAAGCTGCTGACTGGCCACTTGACACCCTCCCC...GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGAGGTCGTGTGTGCTCCTaGCCTGGCAGATGGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SSFPVSLNTLIPKGRREGGRVCS*PGRWED Trigger: GTCTTCCCATCTGCCAGGCCAGGAGCACACACGACC...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCGCTGGAGAAAGAGGCTaGATGTATCTGGTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GRPAWLGIPEDTTASHTLAGERG*MYLVQA Trigger: GGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGC...GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CAA 90 bp | GTGATAGAACCCAGGACCCATCTACAGAGGGAAGACCCGCGTGGCTaGGGATCCCAGAGGACACGACAGCAAGCCACACACTCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VIEPRTHLQREDPRG*GSQRTRQQATHSQA Trigger: TGCCTGTGAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGGGTCCTGGGTTCTATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCCTCAGGGAAAGGCTGTaGTGGAGAAAGAGGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GRPAWLGIPEDTTASHTLLRERL*WRKRLH Trigger: ATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAG...GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCAGGGAAAGGCTGTGCTGGAGAAAGAGGCTGCATGTATCTGGTCCAGGGGCGGAGGGAGGGAGTaGGGAGCAGCAATTCACATC | + |
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Preference number: 2 (lower is better) Translates to: QAQGKAVLEKEAACIWSRGGGRE*GAAIHI Trigger: GATGTGAATTGCTGCTCCCCACTCCCTCCCTCCGCC...CCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAACACCCAACTTGTCCCATGGAGGTTATCTACTTGGGACTGTCACCTGTCAGGCCAAGAGCGGGTaGGGGATGGGGCCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: KATPNLSHGGYLLGTVTCQAKSG*GMGPQD Trigger: GTCCTGTGGCCCCATCCCTCACCCGCTCTTGGCCTG...ACAGGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACAGGGAAAGGCTGTGCTaGAGAAAGAGGCTGCATGTA | + |
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Preference number: 2 (lower is better) Translates to: TEGRPAWLGIPEDTTASHRERLC*RKRLHV Trigger: TACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCT...GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCAATCCTTTTCCTAGCTaGGAGAATGAGAAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: GRPAWLGIPEDTTASHTLNPFPS*ENEKTG Trigger: TCCAGTCTTCTCATTCTCCCAGCTAGGAAAAGGATT...GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAACACCCAACTTGTCCCATGGAGGTTATCTACTTGGGACTGTCACCTGTCCACCTGGGAGTCCCTaGGGAGAGTGGAGTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KATPNLSHGGYLLGTVTCPPGSP*GEWSKM Trigger: CATCTTACTCCACTCTCCCCAGGGACTCCCAGGTGG...ACAGGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR GCA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGGCCTTTCTTTTCACTTaGCTGTGGTCGTGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGAFLFT*LWSCVL Trigger: GAGCACACACGACCACAGGCAAGTGAAAAGAAAGGC...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCCTGTGCACAGGAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTGCTCCCTCTGCAGTCTaGGAAACCAGTTTCTTATGC | + |
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Preference number: 2 (lower is better) Translates to: ASPVHRRYSEPQGQVVRGAPSAV*ETSFLC Trigger: GCATAAGAAACTGGTTTCCCAGACTGCAGAGGGAGC...ACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACAGGAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCCTGTGCACAGGAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTGCAGCAATTCACATCTaGACCACTCTTAGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ASPVHRRYSEPQGQVVRGAAIHI*TTLSTG Trigger: TCCTGTGCTAAGAGTGGTCCAGATGTGAATTGCTGC...ACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACAGGAGAAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGTTTCCCTCTTGCGTTTaGCCTTTCTTTTCACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGFPSCV*PFFSLA Trigger: GGCAAGTGAAAAGAAAGGCCAAACGCAAGAGGGAAA...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CAA 90 bp | GAGAAGACTGGAATCTTTCTGTACAGTTTTCTTTCCCTCTTGCGTTaGGCCTTTCTTTTCACTTGCCTGTGGTCGTGTGTGCTCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: EKTGIFLYSFLSLLR*AFLFTCLWSCVLLA Trigger: GGCCAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAACGCAAGAGGGAAAGAAAACTGTACAGAAAGATTCCAGTCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | ATGCCAGGAGACAGGGTTGGCAGTGTCTGTCCGGGCTaGGCTCACTGCCACAGCAGTTCCCACCTGGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: MPGDRVGSVCPG*AHCHSSSHLGV Trigger: GACTCCCAGGTGGGAACTGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCTCCTGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | TGCGAGGTGAGGGCAGCCAAAAAGCACTGCTTCAGCTaGAGGCTCAGGACTGCCCACCACAGGCACGGACTC | + |
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Preference number: 3 (lower is better) Translates to: CEVRAAKKHCFS*RLRTAHHRHGL Trigger: GAGTCCGTGCCTGTGGTGGGCAGTCCTGAGCCTTCAGCTGAAGCAGTGCTTTTTGGCTGCCCTCACCTCGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 72 bp | GGAAAGGCTGTGCTGGAGAAAGAGGCTGCATGTATCTaGTCCAGGCCAAGAGCGGGTGAGGGATGGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GKAVLEKEAACI*SRPRAGEGWGH Trigger: GTGGCCCCATCCCTCACCCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 72 bp | AGAACCCAGGACCCATCTACAGAGGGAAGACCCGCGTaGCTTGGGATCCCAGAGGACACGACAGCAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RTQDPSTEGRPA*LGIPEDTTASH Trigger: GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGGGTCCTGGGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR GCA 72 bp | TCCCTCTGCAGTCTGGGAAACCAGTTTCTTATGCAGTaGTGTCCCCCGGGGTTTCTCGGGCTTAGCCTCGTG | + |
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Preference number: 3 (lower is better) Translates to: SLCSLGNQFLMQ*CPPGFLGLSLV Trigger: CACGAGGCTAAGCCCGAGAAACCCCGGGGGACAGCACTGCATAAGAAACTGGTTTCCCAGACTGCAGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 72 bp | GAGAGAGAGTTGAGGCTAGGGCCAGACTTATTTGGGTaGCAGGCCCTGAGAAGACAGCTAGGTTGGGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: ERELRLGPDLFG*QALRRQLGWGL Trigger: CAACCCCCAACCTAGCTGTCTTCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | GAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTaGGGGCAGCCAAAAAGCACTGCTTCAGCTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EILRASRSSSAR*GQPKSTASAEG Trigger: GCCTTCAGCTGAAGCAGTGCTTTTTGGCTGCCCTCACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 72 bp | CACTTGTTGCTTTGGGAGCCCCTCCTACTCTGTGCCTaGGCGAATCCTTTTCCTAGCTGGGAGAATGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: HLLLWEPLLLCA*ANPFPSWENEK Trigger: CTTCTCATTCTCCCAGCTAGGAAAAGGATTCGCCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR-3UTR CAA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGGGCCTTTCTTTTCACTaGCCTGTGGTCGTGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGGLSFH*PVVVCA Trigger: AGCACACACGACCACAGGCAAGTGAAAAGAAAGGCC...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | CAAATGAAATCAGAGGCAGGCAGAATAGTCAGGGGCTaGGTCCAACACTTGTTGCTTTGGGAGCCCCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: QMKSEAGRIVRG*VQHLLLWEPLL Trigger: TAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAGCCCCTGACTATTCTGCCTGCCTCTGATTTCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CCA 72 bp | CTCCTACTCTGTGCCTGGGCGAATCCTTTTCCTAGCTaGGAGAATGAGAAGACTGGAATCTTTCTGTACAGT | + |
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Preference number: 3 (lower is better) Translates to: LLLCAWANPFPS*ENEKTGIFLYS Trigger: ACTGTACAGAAAGATTCCAGTCTTCTCATTCTCCCAGCTAGGAAAAGGATTCGCCCAGGCACAGAGTAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | CTAGAGACTACAGCATCAAGACAGAGACAGCGTGACTaGCAGCTGACATTCTTGACAATCTTATCCACCTTC | + |
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Preference number: 3 (lower is better) Translates to: LETTASRQRQRD*QLTFLTILSTF Trigger: GAAGGTGGATAAGATTGTCAAGAATGTCAGCTGTCAGTCACGCTGTCTCTGTCTTGATGCTGTAGTCTCTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR TCA 72 bp | AGCTCTAGAGACTACAGCATCAAGACAGAGACAGCGTaGCTGACAGCTGACATTCTTGACAATCTTATCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSRDYSIKTETA*LTADILDNLIH Trigger: GTGGATAAGATTGTCAAGAATGTCAGCTGTCAGTCACGCTGTCTCTGTCTTGATGCTGTAGTCTCTAGAGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGAGGCCACCCGCCCCGCTaGCACCCACACTCACACCGC | + |
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Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGGHPPR*HPHSHR Trigger: GCGGTGTGAGTGTGGGTGGCAGCGGGGCGGGTGGCC...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGACGGGCCATGCGAGGCTaGTGTGGCGGCGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGRAMRG*CGGGCW Trigger: CCAGCAGCCGCCGCCACAGCAGCCTCGCATGGCCCG...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR CCA 90 bp | CCATCTACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGGGGGCCGTGGTGCTaGTGCTCGGGCCTTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: PSTEGRPAWLGIPEDTTARGPWC*CSGLPP Trigger: GGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCT...TGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR TCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGAGGGCAGACCGGGGGATaGAGGTGGGGCTGGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGGQTGG*RWGWVT Trigger: AGTCACCCAGCCCCACCTTCATCCCCCGGTCTGCCC...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR TCA 90 bp | ACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACCAGGTTCTTTGTGGGTaGGCGGGCCATGCGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TEGRPAWLGIPEDTTASHQVLCG*AGHARL Trigger: CAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTG...GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | TGCCAGGAGACAGGGTTGGCAGTGTCTGTCCGGGCTGAGCTCACTGCCACAGCACAAACAGGTCTGCCCTaGGGCGGGGCAGCTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: CQETGLAVSVRAELTATAQTGLP*GGAACC Trigger: ACAACAAGCTGCCCCGCCGCAGGGCAGACCTGTTTG...TGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCTCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | CAGGCTCAGGGAAAGGCTGTGCTGGAGAAAGAGGCTGCATGTATCTGGTCCAGGCTCCCCAAACAGGTCTaGCCTGCGGCGGGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QAQGKAVLEKEAACIWSRLPKQV*PAAGQL Trigger: AAGCTGCCCCGCCGCAGGGCAGACCTGTTTGGGGAG...CCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | TGCCAGGAGACAGGGTTGGCAGTGTCTGTCCGGGCTGAGCTCACTGCCACAGCAGAGAGCTGTCCTGGCTaGCGATGGGCACAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: CQETGLAVSVRAELTATAESCPG*RWAQTP Trigger: AGGTGTTTGTGCCCATCGGCAGCCAGGACAGCTCTC...TGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCTCCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR GCA 90 bp | TGCCAGGAGACAGGGTTGGCAGTGTCTGTCCGGGCTGAGCTCACTGCCACAGCACAAAGCTGCTGCTGTTaGAAGTGCTGGCTCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: CQETGLAVSVRAELTATAQSCCC*KCWLHR Trigger: GCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTG...TGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCTCCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR CCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGATGTCCTGGCTGCCGATaGGCACAAACACCTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGCPGCR*AQTPGR Trigger: ACGCCCAGGTGTTTGTGCCCATCGGCAGCCAGGACA...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR CCA 90 bp | GCTTCTCCTGTGCACAGGAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTGGGGAGAGCTGGGACTaGGGGGCCGGATTGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ASPVHRRYSEPQGQVVRGGESWD*GAGLAG Trigger: CCCAGCCAATCCGGCCCCCCAGTCCCAGCTCTCCCC...ACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACAGGAGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR CCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGAGTAAAGGTGATGGGCTaGGCAGACCGGGGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGVKVMG*ADRGMK Trigger: CTTCATCCCCCGGTCTGCCCAGCCCATCACCTTTAC...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS-3UTR CCA 90 bp | ACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACCATCGAAGAAGAGGCTaGGTGAGCCACCACCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TEGRPAWLGIPEDTTASHHRRRG*VSHHRC Trigger: ACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATG...GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| 3UTR CAA 72 bp | GGAGGGGCTGGGCAGGCGGGTAAGGCAACACCCAACTaGTCCCATGGAGGTTATCTACTTGGGACTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGAGQAGKATPN*SHGGYLLGTVT Trigger: GGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTTACCCGCCTGCCCAGCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACGGGACACATCAAAGCTaGTGCTGTTGCAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEGRPAWLGIPEDTTASHGTHQS*CCCKCW Trigger: CCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCC...GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTTGCGTTTGGCCTTTCTTTTCACTTGCCTGTGGTCGTGTGTGCTCCTGCTAGGCCGCTCCGCTTaGCAGCCAGCTCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLRLAFLFTCLWSCVLLLGRSA*QPAPPQ Trigger: CTGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAG...CAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAACGCAAGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGAATGGGCACAAACACCTaGGCGTCAGGGTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGMGTNT*ASGLKL Trigger: CAGCTTCAACCCTGACGCCCAGGTGTTTGTGCCCAT...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGGTGGGGCTGGGTGACTaGCCAAAGGACGGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGVGLGD*PKDGEG Trigger: TCCCTCGCCGTCCTTTGGCCAGTCACCCAGCCCCAC...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACACCCAACTTGTCCCATGGAGGTTATCTACTTGGGACTGTCACCTGTGGGCCGTGGTGCTGGTaGTCGGGCCTTCCACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KATPNLSHGGYLLGTVTCGPWCW*SGLPPH Trigger: ATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCC...ACAGGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGATGTACACAAACTCCTTaGCATTGGGGGAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPVSLNTLIPKGRREGCTQTP*HWGRAG Trigger: CCCAGCTCTCCCCCAATGCCAAGGAGTTTGTGTACA...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACACACTCGCTGGAAGGGCTGGTTaGGATACTGCATGGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPAWLGIPEDTTASHTLAGRAG*DTAWYS Trigger: TGAATACCATGCAGTATCCCAACCAGCCCTTCCAGC...GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCCAACACTTGTTGCTTTGGGAGCCCCTCCTACTCTGTGCCTGGGCGAACTCTTTGTCCAGCTCTaGGGTACCACTCGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLVALGAPPTLCLGELFVQL*GTTRLT Trigger: AGTGAGGCGAGTGGTACCCCAGAGCTGGACAAAGAG...TTCGCCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| 3UTR CAA 72 bp | CAGAATAGTCAGGGGCTGAGTCCAACACTTGTTGCTTaGGGAGCCCCTCCTACTCTGTGCCTGGGCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QNSQGLSPTLVA*GAPPTLCLGES Trigger: GGATTCGCCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAGCCCCTGACTATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGAGAGAGTTGAGGCTAGGGCCAGACTTATTTGGGTGGCAGGCCCTGAGAACCACTTCCCCAATGTaGACACAGCGGAAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PERELRLGPDLFGWQALRTTSPM*TQRKPE Trigger: TTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGT...TCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCTGTGCACAGGAGATACTCAGAGCCTCAAGGTCAAGTAGTGCGAGGTTCAGCAGGTTCTTTGTaGGTGAGCGGGCCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASPVHRRYSEPQGQVVRGSAGSL*VSGPCE Trigger: CTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGA...ACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACAGGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACACCCAACTTGTCCCATGGAGGTTATCTACTTGGGACTGTCACCTGTTGCTGCTGTTGCAAGTaGTGGCTCCACCGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KATPNLSHGGYLLGTVTCCCCCK*WLHRCR Trigger: TCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCA...ACAGGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACACCCAACTTGTCCCATGGAGGTTATCTACTTGGGACTGTCACCTGTGAAGAAGAGGCTGGGTaGGCCACCACCGTTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KATPNLSHGGYLLGTVTCEEEAG*ATTVVH Trigger: GTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTC...ACAGGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGAGAGAGTTGAGGCTAGGGCCAGACTTATTTGGGTGGCAGGCCCTGAGATTCTCCGGGTACCAGTaGCCCTCATATTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PERELRLGPDLFGWQALRFSGYQ*PSYFFL Trigger: GAGAAAGAAATATGAGGGCCACTGGTACCCGGAGAA...TCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| 3UTR CAA 72 bp | TTGCTGAAGTCTAGGGACTCCTCTCAGGCATCAGGCTaGGGTATCCTCCCGCCCTTCAGAGTTATTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSRDSSQASG*GILPPFRVIFV Trigger: AACAAAAATAACTCTGAAGGGCGGGAGGATACCCAAGCCTGATGCCTGAGAGGAGTCCCTAGACTTCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGATGAGGTTCAGTGAATaGATAGATAGAGAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGMRFSE*IDRERL Trigger: GAGCCTCTCTCTATCTATGCATTCACTGAACCTCAT...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| 3UTR CAA 72 bp | GGAATCTTTCTGTACAGTTTTCTTTCCCTCTTGCGTTaGGCCTTTCTTTTCACTTGCCTGTGGTCGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIFLYSFLSLLR*AFLFTCLWSCV Trigger: CACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAACGCAAGAGGGAAAGAAAACTGTACAGAAAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 90 bp | TTGTGCTTCAGCAGGTTCTTTGTGGGTGAGCGGGCCATGCGAGGCTaGTGTGGCGGCGGCTGCTGGCCACCCGCCCCGCTGCCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LCFSRFFVGERAMRG*CGGGCWPPAPLPPT Trigger: TGTGGGTGGCAGCGGGGCGGGTGGCCAGCAGCCGCCGCCACAGCAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 90 bp | TGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGCTGGTaGTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGGGTGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CKCWLHRCRRGPWCW*SGLPPHRRRGWVSH Trigger: GTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 90 bp | TGCTGTTGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTaGTGGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCCKCWLHRCRRGPW*WCSGLPPHRRRGWV Trigger: CACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 90 bp | TGTTGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGCTaGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCKCWLHRCRRGPWC*CSGLPPHRRRGWVS Trigger: GCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 90 bp | TGCTGCTGTTGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCCGTaGTGCTGGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCCCKCWLHRCRRGP*CWCSGLPPHRRRGW Trigger: CCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 90 bp | CGCCTCCGAACACCTGGGACACATCAAAGCTGCTGCTGTTGCAAGTaGTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGCTGGTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLRTPGTHQSCCCCK*WLHRCRRGPWCWCS Trigger: CGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGTTCGGAGGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 90 bp | CGGGCACGTTGGCACGCACATCCTCCACAGCTAGGCCGCTCCGCTTaGCAGCCAGCTCCACCACAGGGTCTACCACTTCCCCAATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RARWHAHPPQLGRSA*QPAPPQGLPLPQCG Trigger: TCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 90 bp | CCGTGGTGCTGGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTaGGTGAGCCACCACCGTTGTACACAAACTCCTTGGCATTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PWCWCSGLPPHRRRG*VSHHRCTQTPWHWG Trigger: CCCCCAATGCCAAGGAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS TCA 90 bp | GGTGCTGGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGGGTaGGCCACCACCGTTGTACACAAACTCCTTGGCATTGGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAGARAFHPIEEEAG*ATTVVHKLLGIGGE Trigger: CTCTCCCCCAATGCCAAGGAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 90 bp | CGCTTGGCAGCCAGCTCCACCACAGGGTCTACCACTTCCCCAATGTaGACACAGCGGAAGCCAGAACCCTTCAACGGCTTCTCCGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RLAASSTTGSTTSPM*TQRKPEPFNGFSGY Trigger: GTACCCGGAGAAGCCGTTGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTGGCTGCCAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGGCTAGGCCGCTCCGCTaGGCAGCCAGCTCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGARPLR*AASSTT Trigger: TGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGC...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGAGACAGGGTTGGCAGTGTCTGTCCGGGCTGAGCTCACTGCCACAGCAGGTGAGCCACCACCGTaGTACACAAACTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CQETGLAVSVRAELTATAGEPPP*YTNSLA Trigger: TGCCAAGGAGTTTGTGTACAACGGTGGTGGCTCACC...TGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCTCCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCAGGGAAAGGCTGTGCTGGAGAAAGAGGCTGCATGTATCTGGTCCAGGGCTTCAGCAGGTTCTTaGTGGGTGAGCGGGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QAQGKAVLEKEAACIWSRASAGS*WVSGPC Trigger: GCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGC...CCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTCCCGGTGAGCCTCAACACACTGATCCCAAAGGGGCGGAGGGAGGGACTGCTCTTGATCTCTTaGTCCAGCTCTGGGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSFPVSLNTLIPKGRREGLLLIS*SSSGVP Trigger: TGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAG...TCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 90 bp | GCTGGGATGAGGTTCAGTGAATGCATAGATAGAGAGAGGCTCTTGTaGTTCAGCAGGTTCTTTGTGGGTGAGCGGGCCATGCGAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGMRFSECIDRERLL*FSRFFVGERAMRGC Trigger: GCAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTCACTGAACCTCATCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGGAAGACCCGCGTGGCTTGGGATCCCAGAGGACACGACAGCAAGCCACTTAGTGGAACCAAATTaGGTGGCAGCAAAAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TEGRPAWLGIPEDTTASHLVEPN*VAAKEA Trigger: TGCCTCTTTTGCTGCCACCAAATTTGGTTCCACTAA...GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAGAGAGTTGAGGCTAGGGCCAGACTTATTTGGGTGGCAGGCCCTGAGAGATAGAGAGAGGCTCTaGTGCTTCAGCAGGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PERELRLGPDLFGWQALRDRERL*CFSRFF Trigger: AAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATC...TCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCCCCGACACATACTTCCTTACAAAGAGACAATCAACCCACCCTGGGTTGTACACAAACTCCTaGGCATTGGGGGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVTPDTYFLTKRQSTHPGLYTNS*ALGESW Trigger: CCAGCTCTCCCCCAATGCCAAGGAGTTTGTGTACAA...CCCAGGGTGGGTTGATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTTGCGTTTGGCCTTTCTTTTCACTTGCCTGTGGTCGTGTGTGCTCCTGGGGTTGAAGCTGCTCTaGATCTCTTTGTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLRLAFLFTCLWSCVLLGLKLL*ISLSSS Trigger: AGAGCTGGACAAAGAGATCAAGAGCAGCTTCAACCC...CAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAACGCAAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 72 bp | AGCAGGTTCTTTGTGGGTGAGCGGGCCATGCGAGGCTaGTGTGGCGGCGGCTGCTGGCCACCCGCCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRFFVGERAMRG*CGGGCWPPAPL Trigger: CAGCGGGGCGGGTGGCCAGCAGCCGCCGCCACAGCAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 72 bp | TGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGCTGGTaGTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLHRCRRGPWCW*SGLPPHRRRGW Trigger: CCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 72 bp | TGGCACGCACATCCTCCACAGCTAGGCCGCTCCGCTTaGCAGCCAGCTCCACCACAGGGTCTACCACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WHAHPPQLGRSA*QPAPPQGLPLP Trigger: GGGAAGTGGTAGACCCTGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CAA 90 bp | TCGGGCACGTTGGCACGCACATCCTCCACAGCTAGGCCGCTCCGCTaGGCAGCCAGCTCCACCACAGGGTCTACCACTTCCCCAATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGTLARTSSTARPLR*AASSTTGSTTSPMW Trigger: CCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 72 bp | ACACCTGGGACACATCAAAGCTGCTGCTGTTGCAAGTaGTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPGTHQSCCCCK*WLHRCRRGPWC Trigger: GCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CAA 72 bp | TTGGCACGCACATCCTCCACAGCTAGGCCGCTCCGCTaGGCAGCCAGCTCCACCACAGGGTCTACCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LARTSSTARPLR*AASSTTGSTTS Trigger: GGAAGTGGTAGACCCTGTGGTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CAA 72 bp | CCTCCGAACACCTGGGACACATCAAAGCTGCTGCTGTaGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPNTWDTSKLLL*QVLAPPLPKGA Trigger: GGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGTTCGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CAA 90 bp | TTAGCACCGCCTCCGAACACCTGGGACACATCAAAGCTGCTGCTGTaGCAAGTGCTGGCTCCACCGCTGCCGAAGGGGGCCGTGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPPPNTWDTSKLLL*QVLAPPLPKGAVVL Trigger: CAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGTTCGGAGGCGGTGCTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS GCA 72 bp | CACCGCCTCCGAACACCTGGGACACATCAAAGCTGCTaGTGTTGCAAGTGCTGGCTCCACCGCTGCCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRLRTPGTHQSC*CCKCWLHRCRR Trigger: CCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGTTCGGAGGCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 72 bp | ATAGAGAGAGGCTCTTGTGCTTCAGCAGGTTCTTTGTaGGTGAGCGGGCCATGCGAGGCTGCTGTGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IERGSCASAGSL*VSGPCEAAVAA Trigger: CGCCGCCACAGCAGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
||
| CDS CCA 72 bp | GCCAGCTCCACCACAGGGTCTACCACTTCCCCAATGTaGACACAGCGGAAGCCAGAACCCTTCAACGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSTTGSTTSPM*TQRKPEPFNGF Trigger: GAAGCCGTTGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS CCA 72 bp | TGGTGCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTaGGTGAGCCACCACCGTTGTACACAAACTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WCSGLPPHRRRG*VSHHRCTQTPW Trigger: CCAAGGAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS CAA 90 bp | CTGCCGATGGGCACAAACACCTGGGCGTCAGGGTTGAAGCTGCTCTaGATCTCTTTGTCCAGCTCTGGGGTACCACTCGCCTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LPMGTNTWASGLKLL*ISLSSSGVPLASLS Trigger: TGACAGTGAGGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAGCTTCAACCCTGACGCCCAGGTGTTTGTGCCCATCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS TCA 72 bp | GCTCGGGCCTTCCACCCCATCGAAGAAGAGGCTGGGTaGGCCACCACCGTTGTACACAAACTCCTTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: ARAFHPIEEEAG*ATTVVHKLLGI Trigger: AATGCCAAGGAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS CAA 72 bp | GGCACAAACACCTGGGCGTCAGGGTTGAAGCTGCTCTaGATCTCTTTGTCCAGCTCTGGGGTACCACTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GTNTWASGLKLL*ISLSSSGVPLA Trigger: GGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAGCTTCAACCCTGACGCCCAGGTGTTTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS CAA 90 bp | TTGGCTGGGATGAGGTTCAGTGAATGCATAGATAGAGAGAGGCTCTaGTGCTTCAGCAGGTTCTTTGTGGGTGAGCGGGCCATGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LAGMRFSECIDRERL*CFSRFFVGERAMRG Trigger: GCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTCACTGAACCTCATCCCAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS GCA 72 bp | AGGTTCAGTGAATGCATAGATAGAGAGAGGCTCTTGTaGTTCAGCAGGTTCTTTGTGGGTGAGCGGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RFSECIDRERLL*FSRFFVGERAM Trigger: CATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTCACTGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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| CDS CAA 72 bp | ATGAGGTTCAGTGAATGCATAGATAGAGAGAGGCTCTaGTGCTTCAGCAGGTTCTTTGTGGGTGAGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: MRFSECIDRERL*CFSRFFVGERA Trigger: GGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTCACTGAACCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050467.9 |
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