RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNXB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033327

Ensembl transcript IDs: ENSMUST00000087399.5, ENSMUST00000168533.8, ENSMUST00000238305.2, ENSMUST00000238967.2

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGAAGGACCACCGGGCTTaGGAGGGGGCCGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQKDHRA*EGAVGP
Trigger: CGGCCCCACGGCCCCCTCCCAAGCCCGGTGGTCCTT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGGCCCGGGGTCCCCTaGGCCCTGACCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGPGVP*ALTSRN
Trigger: GTTCCTGCTGGTCAGGGCCCAGGGGACCCCGGGCCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGCGCTGCCAGGTGCTaGGGCCTGAAGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSAARC*GLKGWG
Trigger: GCCCCACCCCTTCAGGCCTCAGCACCTGGCAGCGCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCTCTGGGGCCTCTGTaGTGGGCTCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPALGPL*WALGSG
Trigger: CCCCGAGCCCAGAGCCCAGCACAGAGGCCCCAGAGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGCCCGCGCCCCTaGCAATCTCCAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPQRPRP*QSPGQE
Trigger: CTCTTGCCCTGGAGATTGTCAGGGGCGCGGGCGCTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGTTGCCTCTGTCACTaGCAGCGTCCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGCLCH*QRPQAG
Trigger: CCCGGCCTGGGGACGCTGGCAGTGACAGAGGCAACC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTTGCCTCTGTCACTaGCAGCGTCCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGCLCH*QRPQAG
Trigger: CCCGGCCTGGGGACGCTGGCAGTGACAGAGGCAACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAAGGACCACCGGGCTTaGGAGGGGGCCGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWKDHRA*EGAVGP
Trigger: CGGCCCCACGGCCCCCTCCCAAGCCCGGTGGTCCTT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCGCAGCGACCCCTCTaGCTGCAGCCCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSQRPL*LQPLGQ
Trigger: CTGTCCCAGGGGCTGCAGCCAGAGGGGTCGCTGCGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGGCCCGGTGTAGCCTaGGTTGCACACACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGPGVA*VAHTAP
Trigger: GGGCGCTGTGTGTGCAACCCAGGCTACACCGGGCCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGGTCCCCTGGGCCCTaGCCAGCAGGAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGSPGP*PAGTGS
Trigger: AGATCCAGTTCCTGCTGGTCAGGGCCCAGGGGACCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGCGCTGCCAGGTGCTaGGGCCTGAAGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSAARC*GLKGWG
Trigger: GCCCCACCCCTTCAGGCCTCAGCACCTGGCAGCGCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGTCAGTCTGGCCTGTaGCAGCTTGGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRQSGL*QLGPQW
Trigger: CCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGCGACCCCTCTGGCTaGAGCCCCTGGGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSDPSG*SPWDSS
Trigger: GGAACTGTCCCAGGGGCTGCAGCCAGAGGGGTCGCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCACATGCACACTCCCTaGACGCAGCGCCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQHMHTP*TQRPRP
Trigger: TGGCCGTGGGCGCTGCGTGCAGGGAGTGTGCATGTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGGGGCACCAGAGCCTaGTGGACGTCTCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGGTRA*WTSPGS
Trigger: GCTACCAGGAGACGTCCAGCAGGCTCTGGTGCCCCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCCCCACACGCTGCCTaGCACGAAGCCCGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAPHAA*HEARRG
Trigger: ACCTCTACGGGCTTCGTGGCAGGCAGCGTGTGGGGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGGGCCAGCTACAGCTaGGGCCACTGTAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRASYS*GHCSRG
Trigger: TCCCCGGCTACAGTGGCCCCAGCTGTAGCTGGCCCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCTGGCTGCAGCCCCTaGGACAGTTCCGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSGCSP*DSSAPH
Trigger: GTGGGGTGCGGAACTGTCCCAGGGGCTGCAGCCAGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGCCTCTGCAGTCGCTaGGACAGCTGCGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGLCSR*DSCECC
Trigger: GCAGCACTCGCAGCTGTCCCAGCGACTGCAGAGGCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGCCCATTCAGGCACTaGCCGCGGCCTCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSPFRH*PRPLQS
Trigger: CGACTGCAGAGGCCGCGGCCAGTGCCTGAATGGGCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCCACAGACACCACGTaGGGCTGGCCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPATDTT*GWPSLS
Trigger: GGACAGGGATGGCCAGCCCCACGTGGTGTCTGTGGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCAGGCGGGGCTCTATaGGGGGCTCTGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPGGAL*GALWSE
Trigger: CTCTGACCACAGAGCCCCCCATAGAGCCCCGCCTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTACCGAGGCGGGGCTGTaGTGTCTTCTCCACGGGAGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPTEAGL*CLLHGS
Trigger: GCTCCCGTGGAGAAGACACCACAGCCCCGCCTCGGT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCTGAAACTGAGAGCTaGGACAGGCGGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSETES*DRRGPG
Trigger: CCCCGGGCCCCGCCTGTCCCAGCTCTCAGTTTCAGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGCTCTCCCAGGAGTaGCTCCTCGGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQLSQE*LLGGLW
Trigger: CCAGAGCCCACCGAGGAGCCACTCCTGGGAGAGCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGGCGTGGCTGGACTaGTGGCTTCCCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQAWLD*WLPRLF
Trigger: GAACAGCCTGGGAAGCCATCAGTCCAGCCACGCCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTGGTGCTGTCATTGCTaGCACGGAGAGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPWCCHC*HGEGAH
Trigger: GTGGGCCCCCTCTCCGTGTCAGCAATGACAGCACCA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCACAGGAGGCCCACTaGGTCCGGGGTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPQEAH*VRGHIC
Trigger: ACAGATGTGACCCCGGACTCAGTGGGCCTCCTGTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCACAGGAGGCCCACTaGGTCCGGGGTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPQEAH*VRGHIC
Trigger: ACAGATGTGACCCCGGACTCAGTGGGCCTCCTGTGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCAGGCCAGAGATGGTaGCCTGGTCCTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPGQRW*PGPHAL
Trigger: CAGGGCATGAGGACCAGGTCACCATCTCTGGCCTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGAGTCGCTGGGACAGCTaGGAGTGCTGCAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSRWDS*ECCSRR
Trigger: GCGACGACTGCAGCACTCGCAGCTGTCCCAGCGACT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGTCGGCCGGGCAGGTaGGAATGCTGCAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSRPGR*ECCSLR
Trigger: GCGAAGACTGCAGCATTCGCACCTGCCCGGCCGACT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCACACTGAGGCGCCCTaGCTTGTCTCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPHTEAP*LVSAQH
Trigger: GTGCTGGGCAGAGACAAGGCAGGGCGCCTCAGTGTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGTGACCTGGTCCTCATaGCCTGGCACCCGAACCACC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPVTWSS*PGTRTT
Trigger: GGTGGTTCGGGTGCCAGGGCATGAGGACCAGGTCAC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCTGGGGCCTCTGTaGTGGGCTCTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLALGPL*WALGSG
Trigger: CCCCGAGCCCAGAGCCCAGCACAGAGGCCCCAGAGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTTGGGAGGGGGCCGTaGGGCCGGAAGTGTCACATT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLGRGP*GRKCHI
Trigger: AATGTGACACTTCCGGCCCCACGGCCCCCTCCCAAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGCTTGGGCCGCAGTaGGACAGCATCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQLGPQ*DSILLC
Trigger: GCACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCGCAGCGGCCTCTTTaGCTGCATCCCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSQRPL*LHPLGQ
Trigger: CTGTCCCAGGGGATGCAGCCAAAGAGGCCGCTGCGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCGCAGCGGCCTCTTTaGCTGCATCCCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSQRPL*LHPLGQ
Trigger: CTGTCCCAGGGGATGCAGCCAAAGAGGCCGCTGCGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCGCAGCGACCCCTCTaGCTGCAGCCCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSQRPL*LQPLGQ
Trigger: CTGTCCCAGGGGCTGCAGCCAGAGGGGTCGCTGCGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCACCCAGGCGTGGCTaGACTGATGGCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSPRRG*TDGFPG
Trigger: GCCTGGGAAGCCATCAGTCCAGCCACGCCTGGGTGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCTCCCAGGCGGGGTaGGGATCCTGGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLSQAG*GSWVRV
Trigger: GACCCTGACCCAGGATCCCCACCCCGCCTGGGAGAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATGACCTCCCTCTCCTaGCCCCCGACACGCATCACC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQMTSLS*PPTRIT
Trigger: GGTGATGCGTGTCGGGGGCCAGGAGAGGGAGGTCAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGAGGCCTCGGTGGCTaGAGCTGGTGCTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGGLGG*SWCCHC
Trigger: GCAATGACAGCACCAGCTCCAGCCACCGAGGCCTCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCTTGGAGGCCTCGGTaGCTGGAGCTGGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAWRPR*LELVLS
Trigger: TGACAGCACCAGCTCCAGCCACCGAGGCCTCCAAGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGGTCCTCATGCCCTaGCACCCGAACCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLVLMP*HPNHLG
Trigger: CCCAAGGTGGTTCGGGTGCCAGGGCATGAGGACCAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTCTTCCGTGGACTCTaGGGCCTCTGTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLFRGL*GLCAGL
Trigger: GAGCCCAGCACAGAGGCCCCAGAGTCCACGGAAGAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGAGTGGCTCTTCCGTaGACTCTGGGGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGVALP*TLGPLC
Trigger: GCACAGAGGCCCCAGAGTCCACGGAAGAGCCACTCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGAGTGGCTCTTCCGTaGACTCTGGGGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGVALP*TLGPLC
Trigger: GCACAGAGGCCCCAGAGTCCACGGAAGAGCCACTCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGCTCTCCCAGGAGTaGCTCCTCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQLSQE*LLSGLW
Trigger: CCAGAGCCCACTGAGGAGCCACTCCTGGGAGAGCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCCAAGGACACCGTCTaGAGCTGCCCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAKDTV*SCPSLS
Trigger: GGACAGGGATGGGCAGCTCCAGACGGTGTCCTTGGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCGCTGGTCATAGGCTaGGGCAGAGCTGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSLVIG*GRAGHP
Trigger: CGGGTGCCCAGCTCTGCCTCAGCCTATGACCAGCGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGTGGCTGTCCGCTCTTaGCCCTTTACTGGCACCACC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQVAVRS*PFTGTT
Trigger: GGTGGTGCCAGTAAAGGGTCAAGAGCGGACAGCCAC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCAGGTCTCTTACGATaGCCTCCCTCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPGLLR*PPSPGL
Trigger: GAGGCCAGGAGAGGGAGGTCATCGTAAGAGACCTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCAGGCTGGAGATGGTaGCCTCACGTTGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPGWRW*PHVGLL
Trigger: CAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGTCAGTCTGGCCTGTaGCAGCTTGGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRQSGL*QLGPQW
Trigger: CCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGCGACCCCTCTGGCTaGAGCCCCTGGGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSDPSG*SPWDSS
Trigger: GGAACTGTCCCAGGGGCTGCAGCCAGAGGGGTCGCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCACATGCACACTCCCTaGACGCAGCGCCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWHMHTP*TQRPRP
Trigger: TGGCCGTGGGCGCTGCGTGCAGGGAGTGTGCATGTG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCCCCACACGCTGCCTaGCACGAAGCCCGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWAPHAA*HEARRG
Trigger: ACCTCTACGGGCTTCGTGGCAGGCAGCGTGTGGGGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGCACCACCTTGGGCTaGCCATCCCCGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRTTLG*PSPFLY
Trigger: GTACAAGAACGGGGATGGGCAGCCCAAGGTGGTGCG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTTCTGGCGCCTCTGTaGTGGGCTCTGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVLAPL*WALWGW
Trigger: CCAGCCCCACAGAGCCCAGCACAGAGGCGCCAGAAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGGGAGTCTGGGGTTaGCTCTGTCACTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQGVWG*LCHCQR
Trigger: ACGCTGGCAGTGACAGAGGCAACCCCAGACTCCCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTAGTCCACAGCGCTaGCAGGTGCTGAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGSPQR*QVLRPE
Trigger: TTCAGGCCTCAGCACCTGGCAGCGCTGTGGACTACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGGGCCAGCTACAGCTaGGGCCACTGTAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRASYS*GHCSRG
Trigger: TCCCCGGCTACAGTGGCCCCAGCTGTAGCTGGCCCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCTGGCTGCAGCCCCTaGGACAGTTCCGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSGCSP*DSSAPH
Trigger: GTGGGGTGCGGAACTGTCCCAGGGGCTGCAGCCAGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGTCGCCACAGTCCCATaGGCAGGTCCTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPVATVP*AGPHAA
Trigger: TGCAGCATGAGGACCTGCCCATGGGACTGTGGCGAC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCCCGGTGTAGCCTaGGTTGCACACACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGPGVA*VAHTAP
Trigger: GGGCGCTGTGTGTGCAACCCAGGCTACACCGGGCCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTGGGCACGTCTGGATaGCACAGTCTGGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLGTSG*HSLGLE
Trigger: TTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCTGCGACAGTCACCTaGGCACGTCTGGATGGCACA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAATVT*ARLDGT
Trigger: TGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCAAAGCTGTCAGGCTaGGCAGTCCAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAKLSG*AVQATL
Trigger: CAGTGTGGCCTGGACTGCCCAGCCTGACAGCTTTGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGCACCAGAGCCTGCTaGACGTCTCCTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGTRAC*TSPGSS
Trigger: ACTGCTACCAGGAGACGTCCAGCAGGCTCTGGTGCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCACCAGAGCCTGCTaGACGTCTCCTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGTRAC*TSPGSS
Trigger: ACTGCTACCAGGAGACGTCCAGCAGGCTCTGGTGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCGGGGTGGGGATCCTaGGTCAGGGTCACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAGWGS*VRVTLN
Trigger: ATTCAGAGTGACCCTGACCCAGGATCCCCACCCCGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCTCCCAGGCGGGGTaGGGATCCTGGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLSQAG*GSWVRV
Trigger: GACCCTGACCCAGGATCCCCACCCCGCCTGGGAGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCGCAGGGAGTCTaGGGTCACACCAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPQAQGV*GHTSHS
Trigger: ACTGTGACTGGTGTGACCCCAGACTCCCTGCGCCTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCGATGGGTACACTCTaGGGCTGGCCCTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSMGTL*GWPCAS
Trigger: GGATGCACAGGGCCAGCCCCAGAGTGTACCCATCGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCGATGGGTACACTCTaGGGCTGGCCCTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSMGTL*GWPCAS
Trigger: GGATGCACAGGGCCAGCCCCAGAGTGTACCCATCGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCCACAGACACCACGTaGGGCTGGCCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWATDTT*GWPSLS
Trigger: GGACAGGGATGGCCAGCCCCACGTGGTGTCTGTGGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCAGGCTGTGAGGCGTaGCTTCCTCCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAGCEA*LPPLSA
Trigger: AGCTGAGAGTGGAGGAAGCCACGCCTCACAGCCTGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTCCCAGTTGTGGCCTaGGCTCAGGAGTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLPVVA*AQESWW
Trigger: CCACCATGACTCCTGAGCCCAGGCCACAACTGGGAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGCTCTCCCAGGTGTaGCTTCTTAGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQLSQV*LLRRGL
Trigger: GAGCCCCCTCCTAAGAAGCCACACCTGGGAGAGCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCTCAGTGGTCACGATaGGCTCTGCCTGTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAQWSR*ALPVWS
Trigger: CGACCACACAGGCAGAGCCCATCGTGACCACTGAGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACCGAGGCGGGGCTGTaGTGTCTTCTCCACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTEAGL*CLLHGS
Trigger: GCTCCCGTGGAGAAGACACCACAGCCCCGCCTCGGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCTGAAACTGAGAGCTaGGACAGGCGGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSETES*DRRGPG
Trigger: CCCCGGGCCCCGCCTGTCCCAGCTCTCAGTTTCAGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGTGCGGGCAGTGCCCTaGATGCTGTCTGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPVRAVP*MLSALC
Trigger: ACACAAGGCAGACAGCATCCAGGGCACTGCCCGCAC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTATGCCCGTAGCTGGGTaGGACCATCAGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPMPVAG*DHQALW
Trigger: CCACAGTGCCTGATGGTCCCACCCAGCTACGGGCAT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTCGCTGGTCATAGGCTaGGGCAGAGCTGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSLVIG*GRAGHP
Trigger: CGGGTGCCCAGCTCTGCCTCAGCCTATGACCAGCGA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCAGGCCGGGGACAGTaGCCTCATTCTCATCACCTT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPGRGQ*PHSHHL
Trigger: AAGGTGATGAGAATGAGGTCACTGTCCCCGGCCTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTCGGTCACAGCAATaGCTGAAAGGGGACCCACAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGRSQQ*LKGDPH
Trigger: GTGTGGGTCCCCTTTCAGTCATTGCTGTGACCGACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCAGGCCAGAGATGGTaGCCTGGTCCTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPGQRW*PGPHAL
Trigger: CAGGGCATGAGGACCAGGTCACCATCTCTGGCCTGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGGACCCTCAGGGCCTaGACCTCTGAAGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRTLRA*TSEAGT
Trigger: GGTGCCTGCTTCAGAGGTGCAGGCCCTGAGGGTCCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGCGTCCTCTCTGGTTaGAGTTGCGAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSVLSG*SCEGKS
Trigger: GCTCTTGCCCTCGCAACTGCAACCAGAGAGGACGCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGCGGCCTCTTTGGCTaGATCCCCTGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSGLFG*IPWDSS
Trigger: GGAGCTGTCCCAGGGGATGCAGCCAAAGAGGCCGCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCCCTGCCTTGTCTCTaGCCAGCACCTTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQALPCL*PAPSTL
Trigger: GAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCCCTGCCTTGTCTCTaGCCAGCACCTTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPALPCL*PAPSTL
Trigger: GAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGGGCACCAGAGCCTaGTGGACGTCTCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGGTRA*WTSPGS
Trigger: GCTACCAGGAGACGTCCAGCAGGCTCTGGTGCCCCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGAACCACCTTGGGCTaGCCATCCCCGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRTTLG*PSPFLY
Trigger: GTACAAGAACGGGGATGGGCAGCCCAAGGTGGTTCG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGGAGGCTCTTCCTCTaGAGCTGTCACCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRRLFL*SCHPNS
Trigger: GCTGTTGGGGTGACAGCTGCAGAGGAAGAGCCTCCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGAAGTCACTTCTACTaGAGCCAGCTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGSHFY*SQLSQA
Trigger: CGCCTGGGAGAGCTGGCTGCAGTAGAAGTGACTTCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGAAGTCACTTCTACTaGAGCCAGCTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGSHFY*SQLSQA
Trigger: CGCCTGGGAGAGCTGGCTGCAGTAGAAGTGACTTCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGTCCGGCCATCCACCTaGACACTTTGTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPVRPST*TLCGSP
Trigger: AGGAGAGCCACAAAGTGTGCAGGTGGATGGCCGGAC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTTGGGAGGGGGCCGTaGGGCCGGAAGTGTCACATT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLGRGP*GRKCHI
Trigger: AATGTGACACTTCCGGCCCCACGGCCCCCTCCCAAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCGGCCATCCTCACAGTaGCCCCTTTGGTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRPSSQ*PLWLQS
Trigger: GGACTGTAACCAAAGGGGCCACTGTGAGGATGGCCG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCCTCTGCAGTCGCTaGGACAGCTGCGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGLCSR*DSCECC
Trigger: GCAGCACTCGCAGCTGTCCCAGCGACTGCAGAGGCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGGATGGCACAGTCTaGGCCTCGAAAGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLDGTV*ASKALN
Trigger: GTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTGGATGGCACAGTCTaGGCCTCGAAAGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLDGTV*ASKALN
Trigger: GTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGACGCATCTGCCCTaGATACACTCTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPQTHLP*IHSPLL
Trigger: CAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGCCCTGATAGAAGCTaGGTAGCTGACTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRPDRS*VADCMA
Trigger: GGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATCAGGATAGGGGCCTaGGCCCCTTGGGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQIRIGA*APWVVE
Trigger: CTCTACAACCCAAGGGGCCCAGGCCCCTATCCTGAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTATCAGGATAGGGGCCTaGGCCCCTTGGGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPIRIGA*APWVVE
Trigger: CTCTACAACCCAAGGGGCCCAGGCCCCTATCCTGAT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCACCCAGGCGTGGCTaGACTGATGGCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSPRRG*TDGFPG
Trigger: GCCTGGGAAGCCATCAGTCCAGCCACGCCTGGGTGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCCACGGATATCGCCTaGGGCCCGTCTTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSTDIA*GPSLSL
Trigger: CAAGGACAAAGACGGGCCCCAGGCGATATCCGTGGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTCCACGGATATCGCCTaGGGCCCGTCTTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSTDIA*GPSLSL
Trigger: CAAGGACAAAGACGGGCCCCAGGCGATATCCGTGGA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTACCACACGGGGCTaGCCTTCCTTGTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGTTRG*PSLSLY
Trigger: GTACAGAGACAAGGAAGGCCAGCCCCGTGTGGTACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCTTGGAGGCCTCGGTaGCTGGAGCTGGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWAWRPR*LELVLS
Trigger: TGACAGCACCAGCTCCAGCCACCGAGGCCTCCAAGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTCTTGACCCTTTACTaGCACCACCCTGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLLTLY*HHPGPT
Trigger: AGTGGGCCCAGGGTGGTGCCAGTAAAGGGTCAAGAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGTCCGCAGCATTCGTaGGCTCTGTTATGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGPQHS*ALLCPL
Trigger: CAGAGGGCATAACAGAGCCCACGAATGCTGCGGACC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTCCGCAGCATTCGTaGGCTCTGTTATGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGPQHS*ALLCPL
Trigger: CAGAGGGCATAACAGAGCCCACGAATGCTGCGGACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTGGGCTCAGGAGTCATaGTGGGTGGCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQWAQES*WVALWT
Trigger: AGTCCACAGAGCCACCCACCATGACTCCTGAGCCCA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCTGTGCTGGGCTCTaGGCTCGGGGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLCAGL*ARGLFL
Trigger: GAGGAAGAGCCCCCGAGCCCAGAGCCCAGCACAGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATGACCTCCCTCTCCTaGCCTCCAACACGCATCACC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQMTSLS*PPTRIT
Trigger: GGTGATGCGTGTTGGAGGCCAGGAGAGGGAGGTCAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCTCAGGAGTTGTGGTaGGCACCACCTGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAQELW*APPVWS
Trigger: TGACCACACAGGTGGTGCCCACCACAACTCCTGAGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCTCAGGAGTTGTGGTaGGCACCACCTGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAQELW*APPVWS
Trigger: TGACCACACAGGTGGTGCCCACCACAACTCCTGAGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGTGGAGACAGGGCCATaGCGCTTCCCATCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQVETGP*RFPSLS
Trigger: ACTCAAGGATGGGAAGCGCCATGGCCCTGTCTCCAC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGAGTCAAAGGGACCCTaGGCCACAGACCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQESKGP*ATDQER
Trigger: CCTCTCTTGGTCTGTGGCCCAGGGTCCCTTTGACTC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCCCAAGGCAGAGATaGGTCCCAGGCGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLPRQR*VPGASL
Trigger: GAGGGAAGCGCCTGGGACCCATCTCTGCCTTGGGAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGGAGGATCTGGGTCTaGGTCCGGCCATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWWRIWV*VRPSTC
Trigger: GCAGGTGGATGGCCGGACCCAGACCCAGATCCTCCA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGATGCACAAGCCATCCTaGCACACGCCGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWMHKPS*HTPCWL
Trigger: CAGCCAGCACGGCGTGTGTCAGGATGGCTTGTGCAT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTTCCCAGGCTGTTCCTaGGCCCTGTCCATAATGCCT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQFPGCS*ALSIMP
Trigger: AGGCATTATGGACAGGGCTCAGGAACAGCCTGGGAA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGGCGTGGCTGGACTaGTGGCTTCCCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQAWLD*WLPRLF
Trigger: GAACAGCCTGGGAAGCCATCAGTCCAGCCACGCCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTCACAGCAATGACTaGAAGGGGACCCACACGCTT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGHSND*KGTHTL
Trigger: AAGCGTGTGGGTCCCCTTTCAGTCATTGCTGTGACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGTCACAGCAATGACTaGAAGGGGACCCACACGCTT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGHSND*KGTHTL
Trigger: AAGCGTGTGGGTCCCCTTTCAGTCATTGCTGTGACC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCACAGCTGCAGGAGTTaGAGTTGTGGGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPHSCRS*SCGDLC
Trigger: ACAGAGGTCCCCACAACTTCAACTCCTGCAGCTGTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGAGAGATGCAGGCTGTaGGGCGTGGCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWERCRL*GVASST
Trigger: AGTGGAGGAAGCCACGCCTCACAGCCTGCATCTCTC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCAGGTCTCTTACGATaGCCTCCCTCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPGLLR*PPSPGL
Trigger: GAGGCCAGGAGAGGGAGGTCATCGTAAGAGACCTGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTCTCCAGAACTGGGCTaGGTGTGCGGGCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSPELG*VCGQCP
Trigger: AGGGCACTGCCCGCACACTCAGCCCAGTTCTGGAGA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGAAGCAGGATTTCCTaGATCTGTCCTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGSRIS*ICPPGV
Trigger: CACCCCTGGAGGACAGATTCAGGAAATCCTGCTTCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCTCTGGTTGCAGTTaGGAGGGCAAGAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLSGCS*EGKSAG
Trigger: GCCAGCGCTCTTGCCCTCGCAACTGCAACCAGAGAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGCGGCCTCTTTGGCTaGATCCCCTGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSGLFG*IPWDSS
Trigger: GGAGCTGTCCCAGGGGATGCAGCCAAAGAGGCCGCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGTCGCTGGGACAGCTaGGAGTGCTGCAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSRWDS*ECCSRR
Trigger: GCGACGACTGCAGCACTCGCAGCTGTCCCAGCGACT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGAGCCTGCGTGGCACATaGACAAGCCATCCTGACACA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSLRGT*TSHPDT
Trigger: TGTGTCAGGATGGCTTGTGCATGTGCCACGCAGGCT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCACACTGAGGCGCCCTaGCTTGTCTCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLHTEAP*LVSAQH
Trigger: GTGCTGGGCAGAGACAAGGCAGGGCGCCTCAGTGTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGTTGTTTGTCGGTTGTaGCCACAGTGGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPVVCRL*PQWTQG
Trigger: GCCCTGTGTCCACTGTGGGCACAACCGACAAACAAC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGACCTGGTCCTCATaGCCTGGCACCCGAACCACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVTWSS*PGTRTT
Trigger: GGTGGTTCGGGTGCCAGGGCATGAGGACCAGGTCAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTCAGCACTCCCAGGTaGGGCTTCTTAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVSTPR*GFLGGG
Trigger: GCCTCCTCCTAAGAAGCCGCACCTGGGAGTGCTGAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGAATTGGTCAAAGTGTaGCTCCGGGACCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQELVKV*LRDRPG
Trigger: TCCTGGACGGTCCCGGAGGCACACTTTGACCAATTC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACGTTGGTCTGCTGCTaGAGGCACGACCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTLVCC*RHDLDL
Trigger: CAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGTGCAGGGCCTCGTTaGCCAGCCAGAATTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLCAGPR*PARIPR
Trigger: CCGGGGAATTCTGGCTGGGCAACGAGGCCCTGCACA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGCTTGGGCCGCAGTaGGACAGCATCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQLGPQ*DSILLC
Trigger: GCACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCACCTGGGCACGTCTaGATGGCACAGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSPGHV*MAQSGP
Trigger: AGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATACGCAGCTGGAAGTaGGCAAAGCTGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQIRSWK*AKLSGW
Trigger: CCAGCCTGACAGCTTTGCCCACTTCCAGCTGCGTAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCTTCAGCCATAAGTaGGCCATGCCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGFSHK*AMPLLA
Trigger: GGCAAGAAGAGGCATGGCCCACTTATGGCTGAAGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGATGACCTCCCTCTCCTaGCCCCCGACACGCATCACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLMTSLS*PPTRIT
Trigger: GGTGATGCGTGTCGGGGGCCAGGAGAGGGAGGTCAT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGGTTGTGCCCACAGTaGACACAGGGCCCACACGAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRLCPQ*TQGPHD
Trigger: ATCGTGTGGGCCCTGTGTCCACTGTGGGCACAACCG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGAGGCCTCGGTGGCTaGAGCTGGTGCTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGGLGG*SWCCHC
Trigger: GCAATGACAGCACCAGCTCCAGCCACCGAGGCCTCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCAGGCTGTGAGGCGTaGCTTCCTCCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWAGCEA*LPPLSA
Trigger: AGCTGAGAGTGGAGGAAGCCACGCCTCACAGCCTGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTGGTCCTCATGCCCTaGCACCCGAACCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLVLMP*HPNHLG
Trigger: CCCAAGGTGGTTCGGGTGCCAGGGCATGAGGACCAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGGGCACCGCCTGTGTaGTCAGAGCTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWWAPPV*SELPPL
Trigger: CAGAGGAGGAAGCTCTGACCACACAGGCGGTGCCCA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTGGGCACCACCTGTGTaGTCAGAGCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPWAPPV*SELPSQ
Trigger: CTGAGAAGGAAGCTCTGACCACACAGGTGGTGCCCA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGAATCAAAGTCTCCCTaGGGAACGGTCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPESKSP*GTVQER
Trigger: CCTCTCCTGGACCGTTCCCCAGGGAGACTTTGATTC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGTCTTTGCTTCTGTaGAGACAGGGCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQSLLL*RQGHGA
Trigger: AGCGCCATGGCCCTGTCTCCACAGAAGCAAAGACTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCTTTGCTTCTGTaGAGACAGGGCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPQSLLL*RQGHGA
Trigger: AGCGCCATGGCCCTGTCTCCACAGAAGCAAAGACTG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCAAGGACACCGTCTaGAGCTGCCCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAKDTV*SCPSLS
Trigger: GGACAGGGATGGGCAGCTCCAGACGGTGTCCTTGGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCCCAAGGCAGAGATaGGTCCCAGGCGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLPRQR*VPGASL
Trigger: GAGGGAAGCGCCTGGGACCCATCTCTGCCTTGGGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGGAGGATCTGGGTCTaGGTCCGGCCATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLWRIWV*VRPSTC
Trigger: GCAGGTGGATGGCCGGACCCAGACCCAGATCCTCCA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGCCCTTGGAGGATCTaGGTCTGGGTCCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSPWRI*VWVRPS
Trigger: GGATGGCCGGACCCAGACCCAGATCCTCCAAGGGCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGATGCCCGTAGCTGGGTaGGACCATCAGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWMPVAG*DHQALW
Trigger: CCACAGTGCCTGATGGTCCCACCCAGCTACGGGCAT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCCTCTTTCTGCAGTaGCAGTCACCACATACTCCA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGLFLQ*QSPHTP
Trigger: TGGAGTATGTGGTGACTGTCACTGCAGAAAGAGGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCAGGCTGGAGATGGTaGCCTCACGTTGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPGWRW*PHVGLL
Trigger: CAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTTTGGGTTCCAGGCCTaGGATGAGGACTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPFGFQA*DEDFVL
Trigger: CAGGACAAAGTCCTCATCTCAGGCCTGGAACCCAAA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTTTGGGTTCCAGGCCTaGGATGAGGACTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQFGFQA*DEDFVL
Trigger: CAGGACAAAGTCCTCATCTCAGGCCTGGAACCCAAA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTTGGCGGCACCCATTTaGCTTTGGCTGATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLAAPI*LWLMFP
Trigger: GGGAAACATCAGCCAAAGTCAAATGGGTGCCGCCAA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTTGGCGGCACCCATTTaGCTTTGGCTGATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLAAPI*LWLMFP
Trigger: GGGAAACATCAGCCAAAGTCAAATGGGTGCCGCCAA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCTCTGGTTGCAGTTaGGAGGGCAAGAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLSGCS*EGKSAG
Trigger: GCCAGCGCTCTTGCCCTCGCAACTGCAACCAGAGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCAGGTCCTCATGCTaGAATCTTCGCCACTATAGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGRSSC*NLRHYS
Trigger: GCTATAGTGGCGAAGATTGCAGCATGAGGACCTGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTGGGGCTGGCCCTGTaGATCCTTGTAAAGGATTAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLGLAL*ILVKDY
Trigger: GTAATCCTTTACAAGGATGCACAGGGCCAGCCCCAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGCACCACCTTGGGCTaGCCATCCCCGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRTTLG*PSPFLY
Trigger: GTACAAGAACGGGGATGGGCAGCCCAAGGTGGTGCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTGGCCACTCTGAGTTaGCCATCTCTGTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLATLS*PSLSVY
Trigger: GTACACTGACAGAGATGGGCAACTCAGAGTGGCCAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGGAGGCTCTTCCTCTaGAGCTGTCACCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRRLFL*SCHPNS
Trigger: GCTGTTGGGGTGACAGCTGCAGAGGAAGAGCCTCCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGGGGGCTCTTCCTCTaGAGCTGTCACTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRGLFL*SCHSNN
Trigger: GTTGTTGGAGTGACAGCTGCAGAGGAAGAGCCCCCG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCAGCACTCCCAGGTaGGGCTTCTTAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVSTPR*GFLGGG
Trigger: GCCTCCTCCTAAGAAGCCGCACCTGGGAGTGCTGAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACGTTGGTCTGCTGCTaGAGGCACGACCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTLVCC*RHDLDL
Trigger: CAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGGGAGTCTGGGGTTaGCTCTGTCACTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQGVWG*LCHCQR
Trigger: ACGCTGGCAGTGACAGAGGCAACCCCAGACTCCCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTCCGGCCATCCACCTaGACACTTTGTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVRPST*TLCGSP
Trigger: AGGAGAGCCACAAAGTGTGCAGGTGGATGGCCGGAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCAGGTTAATGCGATaGGTGAACACCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGRLMR*VNTTCF
Trigger: GAAGCAGGTGGTGTTCACCCATCGCATTAACCTGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGGCCATCCTCACAGTaGCCCCTTTGGTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRPSSQ*PLWLQS
Trigger: GGACTGTAACCAAAGGGGCCACTGTGAGGATGGCCG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTGCGACAGTCACCTaGGCACGTCTGGATGGCACA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAATVT*ARLDGT
Trigger: TGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAGACGCATCTGCCCTaGATACACTCTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWQTHLP*IHSPLL
Trigger: CAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCGAGCTGTGAATGGTaGACTCACCCCCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPSCEW*THPLGH
Trigger: ATGACCGAGGGGGTGAGTCCACCATTCACAGCTCGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGGAGGACCCCAGCTaGTCCCTCGTAGAGCACGAA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQEDPS*SLVEHE
Trigger: TTCGTGCTCTACGAGGGACCAGCTGGGGTCCTCCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAAAGCTGTCAGGCTaGGCAGTCCAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAKLSG*AVQATL
Trigger: CAGTGTGGCCTGGACTGCCCAGCCTGACAGCTTTGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGACCTGCATACGCAGCTaGAAGTGGGCAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQTCIRS*KWAKLS
Trigger: TGACAGCTTTGCCCACTTCCAGCTGCGTATGCAGGT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGGGGTGGGGATCCTaGGTCAGGGTCACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAGWGS*VRVTLN
Trigger: ATTCAGAGTGACCCTGACCCAGGATCCCCACCCCGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTACCTGTACTTGCGATTaGGGTCCAGTGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPTCTCD*GPVGRS
Trigger: TGATCTCCCCACTGGACCCCAATCGCAAGTACAGGT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGGTTGTGCCCACAGTaGACACAGGGCCCACACGAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRLCPQ*TQGPHD
Trigger: ATCGTGTGGGCCCTGTGTCCACTGTGGGCACAACCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGGGCTCAGGAGTCATaGTGGGTGGCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWWAQES*WVALWT
Trigger: AGTCCACAGAGCCACCCACCATGACTCCTGAGCCCA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCCCAGTTGTGGCCTaGGCTCAGGAGTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLPVVA*AQESWW
Trigger: CCACCATGACTCCTGAGCCCAGGCCACAACTGGGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAGCTCTCCCAGTTGTaGCCTGGGCTCAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWQLSQL*PGLRSH
Trigger: ATGACTCCTGAGCCCAGGCCACAACTGGGAGAGCTG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGTCAAAGTCTCCCTTaGGAATGGTCCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPSQSLP*EWSRRG
Trigger: GCCTCTCCTGGACCATTCCCAAGGGAGACTTTGACT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTGACACGTATCACCTaGGGCCTCCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLTRIT*GLPSLS
Trigger: GGACAGTGATGGGAGGCCCCAGGTGATACGTGTCAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAGAGCTTCCTCCTCTaGAGCTGTCACACCTATGGT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQSFLL*SCHTYG
Trigger: ACCATAGGTGTGACAGCTCCAGAGGAGGAAGCTCTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGGGCACCGCCTGTGTaGTCAGAGCTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLWAPPV*SELPPL
Trigger: CAGAGGAGGAAGCTCTGACCACACAGGCGGTGCCCA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGCTCTCCCAGGTGTaGCTTCTTAGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQLSQV*LLRRGL
Trigger: GAGCCCCCTCCTAAGAAGCCACACCTGGGAGAGCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTACCAAGAGAGGTGCATaGAGTCAGAGGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPTKRGA*SQRSPL
Trigger: CAGAGGAGACCTCTGACTCCATGCACCTCTCTTGGT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGATGGTGACCTCTCGCTaGTCTGCAGCCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWMVTSR*SAAKDT
Trigger: GGTGTCCTTGGCTGCAGACCAGCGAGAGGTCACCAT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGCGGGCAGTGCCCTaGATGCTGTCTGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVRAVP*MLSALC
Trigger: ACACAAGGCAGACAGCATCCAGGGCACTGCCCGCAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGAAGGTTATGCTGGCTaGGGAGGTGAAGTTAGGACC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQEGYAG*GGEVRT
Trigger: GGTCCTAACTTCACCTCCCCAGCCAGCATAACCTTC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCATCCATGCGGCGCTaGAACACCAGCCAACCACCT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPSMRR*NTSQPP
Trigger: AGGTGGTTGGCTGGTGTTCCAGCGCCGCATGGATGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTATGCTCGTACAGCTaGGAAGAAGGACCACCGGGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVCSYS*EEGPPG
Trigger: GCCCGGTGGTCCTTCTTCTCAGCTGTACGAGCATAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCAAGTCAAGGACAGTaGCCTCACGCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPSQGQ*PHAVLL
Trigger: CAGCAGAACAGCGTGAGGTCACTGTCCTTGACTTGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCACAGCTGCAGGAGTTaGAGTTGTGGGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWHSCRS*SCGDLC
Trigger: ACAGAGGTCCCCACAACTTCAACTCCTGCAGCTGTG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTTCCAGGCCTGAGATaGGGACTTTGTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVPGLR*GLCPGL
Trigger: GAGACCAGGACAAAGTCCTCATCTCAGGCCTGGAAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCATTTGACTTTGGCTaGTGTTTCCCCGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPFDFG*CFPDVA
Trigger: AGCGACATCGGGGAAACATCAGCCAAAGTCAAATGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGAAGCAGGATTTCCTaGATCTGTCCTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGSRIS*ICPPGV
Trigger: CACCCCTGGAGGACAGATTCAGGAAATCCTGCTTCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGCGTCCTCTCTGGTTaGAGTTGCGAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSVLSG*SCEGKS
Trigger: GCTCTTGCCCTCGCAACTGCAACCAGAGAGGACGCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGCCTGCGTGGCACATaGACAAGCCATCCTGACACA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSLRGT*TSHPDT
Trigger: TGTGTCAGGATGGCTTGTGCATGTGCCACGCAGGCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTTGTTTGTCGGTTGTaGCCACAGTGGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVVCRL*PQWTQG
Trigger: GCCCTGTGTCCACTGTGGGCACAACCGACAAACAAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAGGAACTTGTACTTaGGAGAGGGCTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAGTCT*ERAPGL
Trigger: CAGGCCTGGAGCCCTCTCGCAAGTACAAGTTCCTGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGAACCACCTTGGGCTaGCCATCCCCGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRTTLG*PSPFLY
Trigger: GTACAAGAACGGGGATGGGCAGCCCAAGGTGGTTCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGGGGGCTCTTCCTCTaGAGCTGTCACTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRGLFL*SCHSNN
Trigger: GTTGTTGGAGTGACAGCTGCAGAGGAAGAGCCCCCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGAATTGGTCAAAGTGTaGCTCCGGGACCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWELVKV*LRDRPG
Trigger: TCCTGGACGGTCCCGGAGGCACACTTTGACCAATTC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATCAGAGACAGTCTTTaGTTCTGTGGAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQIRDSL*FCGDRA
Trigger: GGCCCTGTCTCCACAGAAGCAAAGACTGTCTCTGAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTGCGAGGTGGTTCCTaGTGGAAGCAGGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVRGGS*WKQDFL
Trigger: CAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCGAGCTGTGAATGGTaGACTCACCCCCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPSCEW*THPLGH
Trigger: ATGACCGAGGGGGTGAGTCCACCATTCACAGCTCGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCGCCCTGATAGAAGCTaGGTAGCTGACTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRPDRS*VADCMA
Trigger: GGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCTTCAGCCATAAGTaGGCCATGCCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGFSHK*AMPLLA
Trigger: GGCAAGAAGAGGCATGGCCCACTTATGGCTGAAGCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTACCACACGGGGCTaGCCTTCCTTGTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGTTRG*PSLSLY
Trigger: GTACAGAGACAAGGAAGGCCAGCCCCGTGTGGTACC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGAGGCTCAGGGAGTTaGGTGTGGTGTCTGTCACGA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRGSGS*VWCLSR
Trigger: TCGTGACAGACACCACACCCAACTCCCTGAGCCTCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCGTCTTTTCCCATCTTaGACCCCAAAGAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRLFPS*TPKSRN
Trigger: GTTCCTGCTCTTTGGGGTCCAAGATGGGAAAAGACG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCTTGACCCTTTACTaGCACCACCCTGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLLTLY*HHPGPT
Trigger: AGTGGGCCCAGGGTGGTGCCAGTAAAGGGTCAAGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGCTCTCCCAGTTGTaGCCTGGGCTCAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQLSQL*PGLRSH
Trigger: ATGACTCCTGAGCCCAGGCCACAACTGGGAGAGCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTGACACGTATCACCTaGGGCCTCCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLTRIT*GLPSLS
Trigger: GGACAGTGATGGGAGGCCCCAGGTGATACGTGTCAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGATGACCTCCCTCTCCTaGCCTCCAACACGCATCACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLMTSLS*PPTRIT
Trigger: GGTGATGCGTGTTGGAGGCCAGGAGAGGGAGGTCAT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGGGCACCACCTGTGTaGTCAGAGCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWWAPPV*SELPSQ
Trigger: CTGAGAAGGAAGCTCTGACCACACAGGTGGTGCCCA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGGAGACAGGGCCATaGCGCTTCCCATCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVETGP*RFPSLS
Trigger: ACTCAAGGATGGGAAGCGCCATGGCCCTGTCTCCAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGATGGTGACCTCTCGCTaGTCTGCAGCCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLMVTSR*SAAKDT
Trigger: GGTGTCCTTGGCTGCAGACCAGCGAGAGGTCACCAT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCAACAAGCAGGGCCTaGGTTTCATTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSTSRA*VSFSVS
Trigger: GGACACAGAGAATGAAACCCAGGCCCTGCTTGTTGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTGACCAGCAGGAACTaGATCTGTGGTGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLTSRN*ICGALY
Trigger: GTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGAGACCACGCACGGTaGCTGTGTAATTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGDHAR*LCNWCR
Trigger: TCGACACCAATTACACAGCCACCGTGCGTGGTCTCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCGAGGTGGTTCCTGCTaGAAGCAGGATTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRGGSC*KQDFLN
Trigger: ATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCCTCTTTCTGCAGTaGCAGTCACCACATACTCCA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGLFLQ*QSPHTP
Trigger: TGGAGTATGTGGTGACTGTCACTGCAGAAAGAGGCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTTCCCAGGCTGTTCCTaGGCCCTGTCCATAATGCCT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLFPGCS*ALSIMP
Trigger: AGGCATTATGGACAGGGCTCAGGAACAGCCTGGGAA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCAATCCCAAACAGAGTaGACCTGTACTTGCGATTGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQQSQTE*TCTCDW
Trigger: CCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCAAGTCAAGGACAGTaGCCTCACGCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPSQGQ*PHAVLL
Trigger: CAGCAGAACAGCGTGAGGTCACTGTCCTTGACTTGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCCCACTTTTGTCCTTaGACTGGACCACAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAHFCP*TGPQKS
Trigger: ACTCTTTTGTGGTCCAGTTCAAGGACAAAAGTGGGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCTTGTACTGGACAGTaGAGGAATCAAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPCTGQ*RNQSLP
Trigger: AGGGAGACTTTGATTCCTTCACTGTCCAGTACAAGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTTCCAGGCCTGAGATaGGGACTTTGTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVPGLR*GLCPGL
Trigger: GAGACCAGGACAAAGTCCTCATCTCAGGCCTGGAAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGACAGCGCAAGAGATaGGCAAGTTGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRQRKR*ASCWGL
Trigger: GAGACCCCAACAACTTGCTCATCTCTTGCGCTGTCT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCAGGTCCTCATGCTaGAATCTTCGCCACTATAGC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGRSSC*NLRHYS
Trigger: GCTATAGTGGCGAAGATTGCAGCATGAGGACCTGCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTAGCAGCTTATACCTaGGACCTGGGTCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVAAYT*DLGLDQ
Trigger: CTGGTCTAGACCCAGGTCGCAGGTATAAGCTGCTAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTGGCCACTCTGAGTTaGCCATCTCTGTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLATLS*PSLSVY
Trigger: GTACACTGACAGAGATGGGCAACTCAGAGTGGCCAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCAGAGCCTACAGGCTaGCCATCATGGAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWAEPTG*PSWKPY
Trigger: ATATGGCTTCCATGATGGGCAGCCTGTAGGCTCTGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCTGACCACTGTGGATaGCATACAGGTTCAACTTGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPADHCG*HTGSTC
Trigger: ACAAGTTGAACCTGTATGGCATCCACAGTGGTCAGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGACGAGGAAGCAGCTTTaGATCAGAGACAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQTRKQL*IRDSLC
Trigger: GCAAAGACTGTCTCTGATGCAAAGCTGCTTCCTCGT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTACGAGGAAGCAGCTTTaGATCAGAGACAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPTRKQL*IRDSLC
Trigger: GCAAAGACTGTCTCTGATGCAAAGCTGCTTCCTCGT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGAACTTGTATTTCCTaGCTGGCTGTAGACCCTCTA +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGTCIS*LAVDPL
Trigger: TAGAGGGTCTACAGCCAGGCAGGAAATACAAGTTCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGCGAGGTGGTTCCTaGTGGAAGCAGGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVRGGS*WKQDFL
Trigger: CAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTGCATCCTCATGTTCTaGATGGCTGGTATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQCILMF*MAGISS
Trigger: GGAAGAGATACCAGCCATCCAGAACATGAGGATGCA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGATACGCAGCTGGAAGTaGGCAAAGCTGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLIRSWK*AKLSGW
Trigger: CCAGCCTGACAGCTTTGCCCACTTCCAGCTGCGTAT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACCTGCATACGCAGCTaGAAGTGGGCAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTCIRS*KWAKLS
Trigger: TGACAGCTTTGCCCACTTCCAGCTGCGTATGCAGGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGAGGCTCAGGGAGTTaGGTGTGGTGTCTGTCACGA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRGSGS*VWCLSR
Trigger: TCGTGACAGACACCACACCCAACTCCCTGAGCCTCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTACAGGCTGCCCATCATaGAAGCCATATAGGGTTATC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPTGCPS*KPYRVI
Trigger: GATAACCCTATATGGCTTCCATGATGGGCAGCCTGT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAATCAAAGTCTCCCTaGGGAACGGTCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLESKSP*GTVQER
Trigger: CCTCTCCTGGACCGTTCCCCAGGGAGACTTTGATTC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGACCTGTATTTTCTATTaGGCTCCAGGCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQTCIFY*APGWRW
Trigger: CCATCTCCAGCCTGGAGCCCAATAGAAAATACAGGT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTGACCAGCAGGAACTaGATCTGTGGTGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLTSRN*ICGALY
Trigger: GTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTTTTGGTTTCCAGCACTaGCATAGGACACCACAAATC +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPFGFQH*HRTPQI
Trigger: GATTTGTGGTGTCCTATGTCAGTGCTGGAAACCAAA...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTTTGGTTTCCAGCACTaGCATAGGACACCACAAATC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQFGFQH*HRTPQI
Trigger: GATTTGTGGTGTCCTATGTCAGTGCTGGAAACCAAA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGGTCAGGGTCACTCTaGATCAAGATCTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGSGSL*IKILAS
Trigger: TGAAGCCAAGATCTTGATTCAGAGTGACCCTGACCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCTTGTACTGGACAGTaGAGGAGTCAAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPCTGQ*RSQSLP
Trigger: AGGGAGACTTTGACTCCTTCACTGTCCAGTACAAGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGACAGCGCAAGAGATaGGCAAGTTGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRQRKR*ASCWGL
Trigger: GAGACCCCAACAACTTGCTCATCTCTTGCGCTGTCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCATCCTCCTGTGCAGTaGTCCTTAAGCCCTTTTACC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWHPPVQ*SLSPFT
Trigger: GGTAAAAGGGCTTAAGGAGCACTGCACAGGAGGATG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCCTCTTTCGTCTCTaGAGCAGTAGTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLLFRL*SSSAIS
Trigger: GCTGATGGCACTACTGCTGCAGAGACGAAAGAGGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTGGGGCTGGCCCTGTaGATCCTTGTAAAGGATTAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLGLAL*ILVKDY
Trigger: GTAATCCTTTACAAGGATGCACAGGGCCAGCCCCAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTACAGAGACCTGGCTaGGTCTTTTCCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLQRPG*VFSHLG
Trigger: TCCAAGATGGGAAAAGACGCAGCCAGGTCTCTGTAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAGAGCCTACAGGCTaGCCATCATGGAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLAEPTG*PSWKPY
Trigger: ATATGGCTTCCATGATGGGCAGCCTGTAGGCTCTGC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCTGGCCACTGTAGATaGCATACAGGTTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAGHCR*HTGSFC
Trigger: ACAAAATGAACCTGTATGGCATCTACAGTGGCCAGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGAGTGCGAGGATTCTaGTCCAGGGTACTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRVRGF*SRVLSR
Trigger: CCTACTGAGTACCCTGGAGCAGAATCCTCGCACTCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACCTGTACTTGCGATTaGGGTCCAGTGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTCTCD*GPVGRS
Trigger: TGATCTCCCCACTGGACCCCAATCGCAAGTACAGGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGTCTTTTCCCATCTTaGACCCCAAAGAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRLFPS*TPKSRN
Trigger: GTTCCTGCTCTTTGGGGTCCAAGATGGGAAAAGACG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGTTATCAGGTATCTGTaGTTCGATTCCAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQVIRYL*FDSRPV
Trigger: TACTGGCCTGGAATCGAACCACAGATACCTGATAAC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGTCAAAGTCTCCCTTaGGAATGGTCCAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSQSLP*EWSRRG
Trigger: GCCTCTCCTGGACCATTCCCAAGGGAGACTTTGACT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCAGAGCTTCCTCCTCTaGAGCTGTCACACCTATGGT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLQSFLL*SCHTYG
Trigger: ACCATAGGTGTGACAGCTCCAGAGGAGGAAGCTCTG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTACTGGATCACAAATTaGTCAAACTGTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQYWITN*SNCSSG
Trigger: CCCCGAGGAACAGTTTGACCAATTTGTGATCCAGTA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACCAAGAGAGGTGCATaGAGTCAGAGGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTKRGA*SQRSPL
Trigger: CAGAGGAGACCTCTGACTCCATGCACCTCTCTTGGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCAACAAGCAGGGCCTaGGTTTCATTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSTSRA*VSFSVS
Trigger: GGACACAGAGAATGAAACCCAGGCCCTGCTTGTTGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCATAGCGAGTGTCTaGAATCAGCCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLIASV*NQPLED
Trigger: ATCCTCCAAGGGCTGATTCCAGACACTCGCTATGAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGAGGTGGTTCCTGCTaGAAGCAGGATTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRGGSC*KQDFLN
Trigger: ATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCAATCCCAAACAGAGTaGACCTGTACTTGCGATTGG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWQSQTE*TCTCDW
Trigger: CCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR TCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCCCACTTTTGTCCTTaGACTGGACCACAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWAHFCP*TGPQKS
Trigger: ACTCTTTTGTGGTCCAGTTCAAGGACAAAAGTGGGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCATCCTCCTGTGCAGTaGTCCTTAAGCCCTTTTACC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLHPPVQ*SLSPFT
Trigger: GGTAAAAGGGCTTAAGGAGCACTGCACAGGAGGATG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGCATGGCCTCTTTCTaGAGTGACAGTCACCACATA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWCMASF*SDSHHI
Trigger: TATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTACAGAGACCTGGCTaGGTCTTTTCCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLQRPG*VFSHLG
Trigger: TCCAAGATGGGAAAAGACGCAGCCAGGTCTCTGTAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCTGACCACTGTGGATaGCATACAGGTTCAACTTGT +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWADHCG*HTGSTC
Trigger: ACAAGTTGAACCTGTATGGCATCCACAGTGGTCAGC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCCCCGTTCTTGTACTaGATCACAAATTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSPFLY*ITNWSN
Trigger: GTTTGACCAATTTGTGATCCAGTACAAGAACGGGGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACAGGTGCACTGTACTaGAAGTCACTTCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTGALY*KSLLLQ
Trigger: CTGCAGTAGAAGTGACTTCCAGTACAGTGCACCTGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCCCTGTTCTTGTACTaGACTAAGAAAGAGTCGAAT +
Preference number: 4 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPLFLY*TKKESN
Trigger: ATTCGACTCTTTCTTAGTCCAGTACAAGAACAGGGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCATAGCGAGTGTCTaGAATCAGCCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLIASV*NQPLED
Trigger: ATCCTCCAAGGGCTGATTCCAGACACTCGCTATGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGCATGGCCTCTTTCTaGAGTGACAGTCACCACATA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLCMASF*SDSHHI
Trigger: TATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR GCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGAACTTGTATTTCCTaGCTGGCTGTAGACCCTCTA +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGTCIS*LAVDPL
Trigger: TAGAGGGTCTACAGCCAGGCAGGAAATACAAGTTCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTTTTGTCCTTGAACTaGACCACAAAAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLLSLN*TTKESK
Trigger: CTTTGACTCTTTTGTGGTCCAGTTCAAGGACAAAAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTTATCAGGTATCTGTaGTTCGATTCCAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWVIRYL*FDSRPV
Trigger: TACTGGCCTGGAATCGAACCACAGATACCTGATAAC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACAGGCTGCCCATCATaGAAGCCATATAGGGTTATC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTGCPS*KPYRVI
Trigger: GATAACCCTATATGGCTTCCATGATGGGCAGCCTGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACAGGTGCACTGTACTaGAAGTCACTTCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTGALY*KSLLLQ
Trigger: CTGCAGTAGAAGTGACTTCCAGTACAGTGCACCTGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTACTGGATCACAAATTaGTCAAACTGTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLYWITN*SNCSSG
Trigger: CCCCGAGGAACAGTTTGACCAATTTGTGATCCAGTA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTCCCCGTTCTTGTACTaGATCACAAATTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSPFLY*ITNWSN
Trigger: GTTTGACCAATTTGTGATCCAGTACAAGAACGGGGA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCCCTGTTCTTGTACTaGACTAAGAAAGAGTCGAAT +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPLFLY*TKKESN
Trigger: ATTCGACTCTTTCTTAGTCCAGTACAAGAACAGGGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CCA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTTTTGTCCTTGAACTaGACCACAAAAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLLSLN*TTKESK
Trigger: CTTTGACTCTTTTGTGGTCCAGTTCAAGGACAAAAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS CCA 90 bp GCCCGCGCCCCTGACAATCTCCAGGGCAAGAGGGCCAGCTACAGCTaGGGCCACTGTAGCCGGGGAAGCACACGCAGCGTCCTCGGACGC +
Preference number: 5 (lower is better)
Translates to: ARAPDNLQGKRASYS*GHCSRGSTRSVLGR
Trigger: GCGTCCGAGGACGCTGCGTGTGCTTCCCCGGCTACAGTGGCCCCAGCTGTAGCTGGCCCTCTTGCCCTGGAGATTGTCAGGGGCGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CGGGGAAGCACACGCAGCGTCCTCGGACGCAGCGTCCCTGGTCGTTaGAGTCTTCGGGACAGGACTTGGAGGGCGGCGATGAGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: RGSTRSVLGRSVPGR*SLRDRTWRAAMRWA
Trigger: CGCCCACCTCATCGCCGCCCTCCAAGTCCTGTCCCGAAGACTGCAACGACCAGGGACGCTGCGTCCGAGGACGCTGCGTGTGCTTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 90 bp CACGCGCTCGAACTGACCACGGAGCCCGTCCAGGGACACAATCAGTaGGCCGTCGGCTGCACTGCCCAGCACCTCCGGTTTCGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: HALELTTEPVQGHNQ*AVGCTAQHLRFRVA
Trigger: CGCCACCCGAAACCGGAGGTGCTGGGCAGTGCAGCCGACGGCTCACTGATTGTGTCCCTGGACGGGCTCCGTGGTCAGTTCGAGCGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS GCA 90 bp AGGCGCAGCGGCTCAGGTCAAAGACACCGTGGAGGCTGCAGAGGCTaGGCACGTCAGTCTGGCCTGTGCCAGCTTGGGCCGCAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: RRSGSGQRHRGGCRG*ARQSGLCQLGPQWD
Trigger: GTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCTGAGCCGCTGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CACAGCGGCCACGCCGGCGACAGTCGGCCGGGCAGGTGCGAATGCTaGAGTCTTCGCCCGCATAGCCTGCGTGGCACATGCACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: HSGHAGDSRPGRCEC*SLRPHSLRGTCTSH
Trigger: ATGGCTTGTGCATGTGCCACGCAGGCTATGCGGGCGAAGACTGCAGCATTCGCACCTGCCCGGCCGACTGTCGCCGGCGTGGCCGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GCCCGGGGTCCCCTGGGCCCTGACCAGCAGGAACTGGATCTGTGGTaGCCTCTACAGACACAGGTCCGTGGCGTGTCCCTTCACGGAGGC +
Preference number: 5 (lower is better)
Translates to: ARGPLGPDQQELDLW*PLQTQVRGVSLHGG
Trigger: GCCTCCGTGAAGGGACACGCCACGGACCTGTGTCTGTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAGGGCCCAGGGGACCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp ATCAGTGAGCCGTCGGCTGCACTGCCCAGCACCTCCGGTTTCGGGTaGCGCGCTGTAGTCACCGGGTGTGCACCATCGGATGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ISEPSAALPSTSGFG*RAVVTGCAPSDAGP
Trigger: GGGCCCAGCATCCGATGGTGCACACCCGGTGACTACAGCGCGCCACCCGAAACCGGAGGTGCTGGGCAGTGCAGCCGACGGCTCACTGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS TCA 90 bp GGGGGCACCAGAGCCTGCTGGACGTCTCCTGGTAGCAGTTCTTCGTaGGCCCAGGGCCCCTCGGCCACCTGCATACGCAGCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GGTRACWTSPGSSSS*AQGPSATCIRSWKW
Trigger: CCACTTCCAGCTGCGTATGCAGGTGGCCGAGGGGCCCTGGGCTCACGAAGAACTGCTACCAGGAGACGTCCAGCAGGCTCTGGTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CACAGGAACAGGCGCAGCGGCTCAGGTCAAAGACACCGTGGAGGCTaGAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAGCTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: HRNRRSGSGQRHRGG*RGCARQSGLCQLGP
Trigger: CGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCTGAGCCGCTGCGCCTGTTCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp GCAAGCGGACAGTGCGTTCAGAACCATCCACAGTCAGCTCCCCGCTaGGGCCCTTGGCTGGTAGCAGTGGCCGCCAGCGCAACACCACGC +
Preference number: 5 (lower is better)
Translates to: ASGQCVQNHPQSAPR*GPWLVAVAASATPR
Trigger: GCGTGGTGTTGCGCTGGCGGCCACTGCTACCAGCCAAGGGCCCCAGCGGGGAGCTGACTGTGGATGGTTCTGAACGCACTGTCCGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS GCA 90 bp CGCAGCGCCCTCCGTCGCCACAGTCCCATGGGCAGGTCCTCATGCTaGAATCTTCGCCACTATAGCCGGGATCGCACACACAGCGGCCGT +
Preference number: 5 (lower is better)
Translates to: RSALRRHSPMGRSSC*NLRHYSRDRTHSGR
Trigger: ACGGCCGCTGTGTGTGCGATCCCGGCTATAGTGGCGAAGATTGCAGCATGAGGACCTGCCCATGGGACTGTGGCGACGGAGGGCGCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GGCAAAGCTGTCAGGCTGGGCAGTCCAGGCCACACTGAGGCGCCCTaGCTTGTCTCTGCCCAGCACCTTCAACTCTCCCAGCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GKAVRLGSPGHTEAP*LVSAQHLQLSQRVV
Trigger: CACCACCCGCTGGGAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGCGCCTCAGTGTGGCCTGGACTGCCCAGCCTGACAGCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CCAGGCTCACAGGAACAGGCGCAGCGGCTCAGGTCAAAGACACCGTaGAGGCTGCAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PGSQEQAQRLRSKTP*RLQRLRTSVWPVPA
Trigger: AGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCTGAGCCGCTGCGCCTGTTCCTGTGAGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp TCGGCCACCTGCATACGCAGCTGGAAGTGGGCAAAGCTGTCAGGCTaGGCAGTCCAGGCCACACTGAGGCGCCCTGCCTTGTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SATCIRSWKWAKLSG*AVQATLRRPALSLP
Trigger: GGGCAGAGACAAGGCAGGGCGCCTCAGTGTGGCCTGGACTGCCCAGCCTGACAGCTTTGCCCACTTCCAGCTGCGTATGCAGGTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CAGTGCGTTCAGAACCATCCACAGTCAGCTCCCCGCTGGGGCCCTTaGCTGGTAGCAGTGGCCGCCAGCGCAACACCACGCGCTCGAACT +
Preference number: 5 (lower is better)
Translates to: QCVQNHPQSAPRWGP*LVAVAASATPRART
Trigger: AGTTCGAGCGCGTGGTGTTGCGCTGGCGGCCACTGCTACCAGCCAAGGGCCCCAGCGGGGAGCTGACTGTGGATGGTTCTGAACGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 90 bp CCCGGGGGACAGCCGCAGCCGGCTGACGGGGGCAGGTTAATGCGATaGGTGAACACCACCTGCTTCTCTCCTCCTTCCACAGTATGCTCG +
Preference number: 5 (lower is better)
Translates to: PGGQPQPADGGRLMR*VNTTCFSPPSTVCS
Trigger: CGAGCATACTGTGGAAGGAGGAGAGAAGCAGGTGGTGTTCACCCATCGCATTAACCTGCCCCCGTCAGCCGGCTGCGGCTGTCCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp TGGAGGCTGCAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAGCTTaGGCCGCAGTGGGACAGCATCCTCCTGTGCAGTGCTCCTTAAGC +
Preference number: 5 (lower is better)
Translates to: WRLQRLRTSVWPVPA*AAVGQHPPVQCSLS
Trigger: GCTTAAGGAGCACTGCACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp AGGTCAAAGACACCGTGGAGGCTGCAGAGGCTGCGCACGTCAGTCTaGCCTGTGCCAGCTTGGGCCGCAGTGGGACAGCATCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RSKTPWRLQRLRTSV*PVPAWAAVGQHPPV
Trigger: CACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp TCCCCTGCTGCGACAGTCACCTGGGCACGTCTGGATGGCACAGTCTaGGCCTCGAAAGCCCTCAACACACACGCATTGTCCGGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: SPAATVTWARLDGTV*ASKALNTHALSGAA
Trigger: TGCCGCGCCGGACAATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CGCCCTGCCTTGTCTCTGCCCAGCACCTTCAACTCTCCCAGCGGGTaGTGCTCCAGGATCAGGATAGGGGCCTGGGCCCCTTGGGTTGTA +
Preference number: 5 (lower is better)
Translates to: RPALSLPSTFNSPSG*CSRIRIGAWAPWVV
Trigger: TACAACCCAAGGGGCCCAGGCCCCTATCCTGATCCTGGAGCACCACCCGCTGGGAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGGCCTGTGCCAGCTaGGGCCGCAGTGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLACAS*GRSGTA
Trigger: TGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGAGGGGGCTCAGGAGTaGTGGTGGGCACCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPEGAQE*WWAPPV
Trigger: CACAGGCGGTGCCCACCACAACTCCTGAGCCCCCTC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS TCA 90 bp GCTGGAAGTGGGCAAAGCTGTCAGGCTGGGCAGTCCAGGCCACACTaGGGCGCCCTGCCTTGTCTCTGCCCAGCACCTTCAACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: AGSGQSCQAGQSRPH*GALPCLCPAPSTLP
Trigger: TGGGAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGCGCCTCAGTGTGGCCTGGACTGCCCAGCCTGACAGCTTTGCCCACTTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CCTGCCTTGTCTCTGCCCAGCACCTTCAACTCTCCCAGCGGGTGGTaGTCCAGGATCAGGATAGGGGCCTGGGCCCCTTGGGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: PALSLPSTFNSPSGW*SRIRIGAWAPWVVE
Trigger: CTCTACAACCCAAGGGGCCCAGGCCCCTATCCTGATCCTGGAGCACCACCCGCTGGGAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CTCGTACAGCTGAGAAGAAGGACCACCGGGCTTGGGAGGGGGCCGTaGGGCCGGAAGTGTCACATTAGACCGAGGAGAGAATGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LVQLRRRTTGLGRGP*GRKCHIRPRREWAC
Trigger: GCAGGCCCATTCTCTCCTCGGTCTAATGTGACACTTCCGGCCCCACGGCCCCCTCCCAAGCCCGGTGGTCCTTCTTCTCAGCTGTACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGAGGCGCCCTGCCTaGTCTCTGCCCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLRRPA*SLPSTF
Trigger: GAAGGTGCTGGGCAGAGACAAGGCAGGGCGCCTCAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGAGGGGGCTCAGGAGTaGTGGTGGGCACCACCTGTG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQEGAQE*WWAPPV
Trigger: CACAGGTGGTGCCCACCACAACTCCTGAGCCCCCTC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCAGGGAGTCTGGGGTaGCCTCTGTCACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPAGSLG*PLSLPA
Trigger: CGCTGGCAGTGACAGAGGCAACCCCAGACTCCCTGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 90 bp AGCCTTCTTGGCAGACGCATCTGCCCTGGATACACTCTCCCCTGCTaGGACAGTCACCTGGGCACGTCTGGATGGCACAGTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLGRRICPGYTLPC*DSHLGTSGWHSLGL
Trigger: GAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTGCCAAGAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CGTAGCCTTCTTGGCAGACGCATCTGCCCTGGATACACTCTCCCCTaGTGCGACAGTCACCTGGGCACGTCTGGATGGCACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RSLLGRRICPGYTLP*CDSHLGTSGWHSLG
Trigger: GCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTGCCAAGAAGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GTGGATAGCCGTGGGTTCGCAAGTGATGCTCCAGGTCCTGTACTGTaGCGCGGAAGCGGCTCAGTTCAGTCGTCAGGTTACCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: VDSRGFASDAPGPVL*RGSGSVQSSGYPTA
Trigger: GGCCGTGGGGTAACCTGACGACTGAACTGAGCCGCTTCCGCGGCACAGTACAGGACCTGGAGCATCACTTGCGAACCCACGGCTATCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 90 bp GACGCATCTGCCCTGGATACACTCTCCCCTGCTGCGACAGTCACCTaGGCACGTCTGGATGGCACAGTCTGGGCCTCGAAAGCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: DASALDTLSPAATVT*ARLDGTVWASKALN
Trigger: GTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTGGCCTGTGCCAGCTaGGGCCGCAGTGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLACAS*GRSGTA
Trigger: TGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGTCAGCTCTCCCAGTaGTGGCCTGGGCTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGQLSQ*WPGLRS
Trigger: ACTCCTGAGCCCAGGCCACAACTGGGAGAGCTGACC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 90 bp GGTGGTGGTGGTGGTGATGAAGGCGTAGGACTTGGAAGTCTGTCCTaGCCGTACCCCATGGACCTCCACGTGGTAAGTAGTCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: GGGGGDEGVGLGSLS*PYPMDLHVVSSPGP
Trigger: AGGCCCGGGACTACTTACCACGTGGAGGTCCATGGGGTACGGGCAGGACAGACTTCCAAGTCCTACGCCTTCATCACCACCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 90 bp CCCTGGATACACTCTCCCCTGCTGCGACAGTCACCTGGGCACGTCTaGATGGCACAGTCTGGGCCTCGAAAGCCCTCAACACACACGCAT +
Preference number: 5 (lower is better)
Translates to: PWIHSPLLRQSPGHV*MAQSGPRKPSTHTH
Trigger: ATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp TGGAAGTCACTTCTACTGCAGCCAGCTCTCCCAGGCGGGGCTCTATaGGGGGCTCTGTGGTCAGAGAGGCAGTCACACCCACAGTCGACA +
Preference number: 5 (lower is better)
Translates to: WKSLLLQPALPGGAL*GALWSERQSHPQST
Trigger: TGTCGACTGTGGGTGTGACTGCCTCTCTGACCACAGAGCCCCCCATAGAGCCCCGCCTGGGAGAGCTGGCTGCAGTAGAAGTGACTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCTCGCAGCGGCCTCTTaGGCTGCATCCCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWLAAAS*AASPGT
Trigger: TGTCCCAGGGGATGCAGCCAAAGAGGCCGCTGCGAG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCTGGTGGGGCAGTTTaGGCCACCACTGATACCGGC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSGGAV*ATTDTG
Trigger: GCCGGTATCAGTGGTGGCCAAAACTGCCCCACCAGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGTTCTGGGAGCAGCTaGGAGGCCTCGGTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGSGSS*EASVAG
Trigger: TCCAGCCACCGAGGCCTCCAAGCTGCTCCCAGAACC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTAGGAGGAATCTGTACTaGCGGCCAGCATCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRRNLY*RPASRA
Trigger: GGCCCTGGATGCTGGCCGCAAGTACAGATTCCTCCT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGGGGGCTCAGGAGTaGTGGTGGGCACCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLEGAQE*WWAPPV
Trigger: CACAGGCGGTGCCCACCACAACTCCTGAGCCCCCTC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGATGGTGACCTCACGTaGGTCTGCTGCTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPDGDLT*VCCCRH
Trigger: GTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGATGGTGACCTCACGTaGGTCTGCTGCTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQDGDLT*VCCCRH
Trigger: GTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCAGTAGGCTCCTCTTaGGGGTCAGTCACGCCCACG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSVGSS*GSVTPT
Trigger: CGTGGGCGTGACTGACCCCAAAGAGGAGCCTACTGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238305.2
CDS TCA 90 bp CTGCCTCAGGGGGAACTTCCAGTCGCACCCTTTGGTTTCCAGCACTaGCATAGGACACCACAAATCGGTCCACCTCAGCCTGGGGGCGCA +
Preference number: 5 (lower is better)
Translates to: LPQGELPVAPFGFQH*HRTPQIGPPQPGGA
Trigger: TGCGCCCCCAGGCTGAGGTGGACCGATTTGTGGTGTCCTATGTCAGTGCTGGAAACCAAAGGGTGCGACTGGAAGTTCCCCCTGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 90 bp CACAGACCAAGAGAGGTGCATGGAGTCAGAGGTCTCCTCTGTCACTaGCAGTTCACCGAGGCGGGGCTGTGGTGTCTTCTCCACGGGAGC +
Preference number: 5 (lower is better)
Translates to: HRPREVHGVRGLLCH*QFTEAGLWCLLHGS
Trigger: GCTCCCGTGGAGAAGACACCACAGCCCCGCCTCGGTGAACTGTCAGTGACAGAGGAGACCTCTGACTCCATGCACCTCTCTTGGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp CAGGTGCGGCTTCTTAGGAGGAGGCTCAGTGGTCACGATGGGCTCTaGCTGTGTGGTCGTAGCTTCCTCCTCAGTCACACCCACAGTCGA +
Preference number: 5 (lower is better)
Translates to: QVRLLRRRLSGHDGL*LCGRSFLLSHTHSR
Trigger: TCGACTGTGGGTGTGACTGAGGAGGAAGCTACGACCACACAGGCAGAGCCCATCGTGACCACTGAGCCTCCTCCTAAGAAGCCGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp TCTATTGGGCTCCAGGCTGGAGATGGTGACCTCACGTTGGTCTGCTaGTGCAGGCACGACCTGGACCTGCCCTCCCCTGTTCTTGTACTG +
Preference number: 5 (lower is better)
Translates to: SIGLQAGDGDLTLVC*CRHDLDLPSPVLVL
Trigger: CAGTACAAGAACAGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCCAATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp GGATACACTCTCCCCTGCTGCGACAGTCACCTGGGCACGTCTGGATaGCACAGTCTGGGCCTCGAAAGCCCTCAACACACACGCATTGTC +
Preference number: 5 (lower is better)
Translates to: GYTLPCCDSHLGTSG*HSLGLESPQHTRIV
Trigger: GACAATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CTCAAAGCCACGGACGGAGACCACAGTCACCTCATAGCGAGTGTCTaGAATCAGCCCTTGGAGGATCTGGGTCTGGGTCCGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: LKATDGDHSHLIASV*NQPLEDLGLGPAIH
Trigger: GTGGATGGCCGGACCCAGACCCAGATCCTCCAAGGGCTGATTCCAGACACTCGCTATGAGGTGACTGTGGTCTCCGTCCGTGGCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCTCTCTGGTTGCAGTaGCGAGGGCAAGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPLWLQ*RGQERW
Trigger: CCAGCGCTCTTGCCCTCGCAACTGCAACCAGAGAGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTGAGGCGCCCTGCCTaGTCTCTGCCCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLRRPA*SLPSTF
Trigger: GAAGGTGCTGGGCAGAGACAAGGCAGGGCGCCTCAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTTCTGGGAGCAGCTaGGAGGCCTCGGTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGSGSS*EASVAG
Trigger: TCCAGCCACCGAGGCCTCCAAGCTGCTCCCAGAACC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCACAGCTGCAGGAGTaGAAGTTGTGGGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQAQLQE*KLWGPL
Trigger: CAGAGGTCCCCACAACTTCAACTCCTGCAGCTGTGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS CCA 90 bp CTGTATTTTCTATTGGGCTCCAGGCTGGAGATGGTGACCTCACGTTaGTCTGCTGCTGCAGGCACGACCTGGACCTGCCCTCCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LYFLLGSRLEMVTSR*SAAAGTTWTCPPLF
Trigger: GAACAGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCCAATAGAAAATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp GGTGGAGGGGAAGAGGCGCAGAAGCCTGTGCGAGGTGGTTCCTGCTaGAAGCAGGATTTCCTGAATCTGTCCTCCAGGGGTGTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: GGGEEAQKPVRGGSC*KQDFLNLSSRGVKA
Trigger: AGCTTTGACACCCCTGGAGGACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTCCCCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CACTGTAGAAGGTGGAGGGGAAGAGGCGCAGAAGCCTGTGCGAGGTaGTTCCTGCTGGAAGCAGGATTTCCTGAATCTGTCCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: HCRRWRGRGAEACAR*FLLEAGFPESVLQG
Trigger: CCCCTGGAGGACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTCCCCTCCACCTTCTACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCTCTCTGGTTGCAGTaGCGAGGGCAAGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPLWLQ*RGQERW
Trigger: CCAGCGCTCTTGCCCTCGCAACTGCAACCAGAGAGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTATAGGAACAGAGATCTaGCCCCCAGGGGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPIGTEI*PPGVIP
Trigger: TGGGATCACCCCTGGGGGCAAGATCTCTGTTCCTAT...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGAGAGGCTCAGGGAGTaGGGTGTGGTGTCTGTCACG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWERLRE*GVVSVT
Trigger: CGTGACAGACACCACACCCAACTCCCTGAGCCTCTC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGCAGGAGTTGAAGTaGTGGGGACCTCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLQELK*WGPLSK
Trigger: CTTGGACAGAGGTCCCCACAACTTCAACTCCTGCAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTGTCAGGGCCTCAATTaGAGCAGAGCCTACAGGCTG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQCQGLN*SRAYRL
Trigger: CAGCCTGTAGGCTCTGCTCAAATTGAGGCCCTGACA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGTCAGCTCTCCCAGTaGTGGCCTGGGCTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGQLSQ*WPGLRS
Trigger: ACTCCTGAGCCCAGGCCACAACTGGGAGAGCTGACC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCGCCCATCACTGTCCTaGTACTGGACAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRPSLS*YWTVKE
Trigger: CTCCTTCACTGTCCAGTACAAGGACAGTGATGGGCG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGCCCATCACTGTCCTaGTACTGGACAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRPSLS*YWTVKE
Trigger: CTCCTTCACTGTCCAGTACAAGGACAGTGATGGGCG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATCCACCTGCACACTTaGTGGCTCTCCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQIHLHT*WLSSIC
Trigger: GCAGATGGAGGAGAGCCACAAAGTGTGCAGGTGGAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 90 bp TTTTCTATTGGGCTCCAGGCTGGAGATGGTGACCTCACGTTGGTCTaGTGCTGCAGGCACGACCTGGACCTGCCCTCCCCTGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: FSIGLQAGDGDLTLV*CCRHDLDLPSPVLV
Trigger: TACAAGAACAGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCCAATAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GAAGGTGGAGGGGAAGAGGCGCAGAAGCCTGTGCGAGGTGGTTCCTaGTGGAAGCAGGATTTCCTGAATCTGTCCTCCAGGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: EGGGEEAQKPVRGGS*WKQDFLNLSSRGVK
Trigger: TTTGACACCCCTGGAGGACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTCCCCTCCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CAGTGTAGAAGGGCAGATCCGTCAGTCAAGTTCAATGCCCGTAGCTaGGTGGGACCATCAGGCACTGTGGTGAGGAAGCCTGTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: QCRRADPSVKFNARS*VGPSGTVVRKPVRG
Trigger: GCCTCTCACAGGCTTCCTCACCACAGTGCCTGATGGTCCCACCCAGCTACGGGCATTGAACTTGACTGACGGATCTGCCCTTCTACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGATCTTATACTTCCTGTaGGACTCCAGGCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQILYFL*DSRPGT
Trigger: TGTCCCCGGCCTGGAGTCCAACAGGAAGTATAAGAT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTCTGGTGGGGCAGTTTaGGCCACCACTGATACCGGC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLSGGAV*ATTDTG
Trigger: GCCGGTATCAGTGGTGGCCAAAACTGCCCCACCAGA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGAGAGGCTCAGGGAGTaGGGTGTGGTGTCTGTCACG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLERLRE*GVVSVT
Trigger: CGTGACAGACACCACACCCAACTCCCTGAGCCTCTC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGCGTCTTTTCCCATCTaGGACCCCAAAGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPASFPI*DPKEQE
Trigger: TTCCTGCTCTTTGGGGTCCAAGATGGGAAAAGACGC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGCGTCTTTTCCCATCTaGGACCCCAAAGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQASFPI*DPKEQE
Trigger: TTCCTGCTCTTTGGGGTCCAAGATGGGAAAAGACGC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGAGGAGGAATCTGTACTaGCGGCCAGCATCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLRRNLY*RPASRA
Trigger: GGCCCTGGATGCTGGCCGCAAGTACAGATTCCTCCT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCTGTCCAAGCTTCTGTaGTTTCTCTGGGGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQLSKLL*FLWGRS
Trigger: TGACCGACCCCAGAGAAACAACAGAAGCTTGGACAG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTGTCCAAGCTTCTGTaGTTTCTCTGGGGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLSKLL*FLWGRS
Trigger: TGACCGACCCCAGAGAAACAACAGAAGCTTGGACAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGACTGGCCACTCTGAGTaGCCCATCTCTGTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQTGHSE*PISVSV
Trigger: TACACTGACAGAGATGGGCAACTCAGAGTGGCCAGT...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGTACTGGATCACGAATaGGTCAAACTGCCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQVLDHE*VKLPLR
Trigger: CCTGAGGGGCAGTTTGACCAATTCGTGATCCAGTAC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCTCCCATCACTGTCCTaGTACTGGACAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPLPSLS*YWTVKE
Trigger: CTCCTTCACTGTCCAGTACAAGGACAGTGATGGGAG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCGCCCATCACTGTCCTaGTACTGGACAGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQRPSLS*YWTVKE
Trigger: TTCCTTCACTGTCCAGTACAAGGACAGTGATGGGCG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCGCCCATCACTGTCCTaGTACTGGACAGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPRPSLS*YWTVKE
Trigger: TTCCTTCACTGTCCAGTACAAGGACAGTGATGGGCG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTGGCACCCATTTGACTTaGGCTGATGTTTCCCCGATG +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPGTHLT*ADVSPM
Trigger: CATCGGGGAAACATCAGCCAAAGTCAAATGGGTGCC...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGGGCACCCATTTGACTTaGGCTGATGTTTCCCCGATG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQGTHLT*ADVSPM
Trigger: CATCGGGGAAACATCAGCCAAAGTCAAATGGGTGCC...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS TCA 90 bp CTAAGATCCAGTGTGGTCGGGGTCACAGCTACCACCCGGAGGTCCTaGGGACCATCGATCATGGTAGTGATGGTCTTAGAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LRSSVVGVTATTRRS*GPSIMVVMVLEAGG
Trigger: TCCTCCTGCCTCTAAGACCATCACTACCATGATCGATGGTCCTCAGGACCTCCGGGTGGTAGCTGTGACCCCGACCACACTGGATCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 90 bp GTGACAGTCACCACATACTCCACACCAGGCATCAGATCGGTTAGCTaGGTCCTGTCTGCCTCAGGGGGAACTTCCAGTCGCACCCTTTGG +
Preference number: 5 (lower is better)
Translates to: VTVTTYSTPGIRSVS*VLSASGGTSSRTLW
Trigger: CCAAAGGGTGCGACTGGAAGTTCCCCCTGAGGCAGACAGGACTCAGCTAACCGATCTGATGCCTGGTGTGGAGTATGTGGTGACTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GAGCTCCCCAAGACGAGGAAGCAGCTTTGCATCAGAGACAGTCTTTaGTTCTGTGGAGACAGGGCCATGGCGCTTCCCATCCTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: ELPKTRKQLCIRDSL*FCGDRAMALPILES
Trigger: GGACTCAAGGATGGGAAGCGCCATGGCCCTGTCTCCACAGAAGCAAAGACTGTCTCTGATGCAAAGCTGCTTCCTCGTCTTGGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp AGCATCCAGGGCCGTGATAGTGGCTGTCCGCTCTTGACCCTTTACTaGCACCACCCTGGGCCCACTTTTGTCCTTGAACTGGACCACAAA +
Preference number: 5 (lower is better)
Translates to: SIQGRDSGCPLLTLY*HHPGPTFVLELDHK
Trigger: TTTGTGGTCCAGTTCAAGGACAAAAGTGGGCCCAGGGTGGTGCCAGTAAAGGGTCAAGAGCGGACAGCCACTATCACGGCCCTGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CCCAGGCTGTTCCTGAGCCCTGTCTGTATTCGCCCTGATAGAAGCTaGGTAGCTGACTGCATGGCCTCTTTCTGCAGTGACAGTCACCAC +
Preference number: 5 (lower is better)
Translates to: PRLFLSPVCIRPDRS*VADCMASFCSDSHH
Trigger: GTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGACAGGGCTCAGGAACAGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168533.8
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACCCTGGGCCCACTTTaGTCCTTGAACTGGACCACA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTLGPL*SLNWTT
Trigger: TGTGGTCCAGTTCAAGGACAAAAGTGGGCCCAGGGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTGTCAGGGCCTCAATTaGAGCAGAGCCTACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWCQGLN*SRAYRL
Trigger: CAGCCTGTAGGCTCTGCTCAAATTGAGGCCCTGACA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCAGTAGGCTCCTCTTaGGGGTCTGTCACCCCAACA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSVGSS*GSVTPT
Trigger: TGTTGGGGTGACAGACCCCAAAGAGGAGCCTACTGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087399.5
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTGCCCATCCCCGTTCTaGTACTGGATCACAAATTGG +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQCPSPF*YWITNW
Trigger: CCAATTTGTGATCCAGTACAAGAACGGGGATGGGCA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCCAAAGAGTAGAAACTaGTACTTTCGGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: AEKASLVWHAGSSLGTTPPKSRN*YFRAGS
Trigger: GGAGCCAGCCCGAAAGTACAAGTTTCTACTCTTTGG...AGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTGGCGCTTCCCATCCTaGAGTCCAAAGAGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQWRFPS*SPKSRN
Trigger: GTTTCTACTCTTTGGACTCAAGGATGGGAAGCGCCA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGATCCACCTGCACACTTaGTGGCTCTCCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWIHLHT*WLSSIC
Trigger: GCAGATGGAGGAGAGCCACAAAGTGTGCAGGTGGAT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 90 bp GGAGCTCGTGTCCACTCTGTCCGGACTGTTGTCTCCTCTAGAAGATaGATCCTCATGTTCTGGATGGCTGGTATCTCTTCCCCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GARVHSVRTVVSSRR*ILMFWMAGISSPQS
Trigger: CGACTGCGGGGAAGAGATACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGTCCGGACAGAGTGGACACGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp AGATTTTGTGTGGTCCGCAGCATTCGTGGGCTCTGTTATGCCCTCTaGAGTGAGGGGGCCAAAGCGTTTCCTTCCCAGAAGCCCATAGAG +
Preference number: 5 (lower is better)
Translates to: RFCVVRSIRGLCYAL*SEGAKAFPSQKPIE
Trigger: CTCTATGGGCTTCTGGGAAGGAAACGCTTTGGCCCCCTCACTGCAGAGGGCATAACAGAGCCCACGAATGCTGCGGACCACACAAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp GTGGCCTGGTGCTGTATTCGCCCTGATAGAAGCTGGGTAGCTGACTaGATGGCCTCTTTCTGCAGTGACAGTCACCACATACTCCACACC +
Preference number: 5 (lower is better)
Translates to: VAWCCIRPDRSWVAD*MASFCSDSHHILHT
Trigger: GGTGTGGAGTATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGCACCAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGATAGGAACAGAGATCTaGCCCCCAGGGGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLIGTEI*PPGVIP
Trigger: TGGGATCACCCCTGGGGGCAAGATCTCTGTTCCTAT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGGCTTTTCTTCTGGTaGTTTGTCGGTTGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGLFFW*FVGCAH
Trigger: GTGGGCACAACCGACAAACAACCAGAAGAAAAGCCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGACCCTGGGCCCACTTTaGTCCTTGAACTGGACCACA +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLTLGPL*SLNWTT
Trigger: TGTGGTCCAGTTCAAGGACAAAAGTGGGCCCAGGGT...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGACTGGCCACTCTGAGTaGCCCATCTCTGTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWTGHSE*PISVSV
Trigger: TACACTGACAGAGATGGGCAACTCAGAGTGGCCAGT...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCGCCCATCACTGTCCTaGTATTGGACAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWRPSLS*YWTVKE
Trigger: CTCCTTCACTGTCCAATACAAGGACAGTGATGGGCG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 90 bp CTGAGCCCTGTCTGTATTCGCCCTGATAGAAGCTGGGTAGCTGACTaGATGGCCTCTTTCTGCAGTGACAGTCACCACATACTCCACACC +
Preference number: 5 (lower is better)
Translates to: LSPVCIRPDRSWVAD*MASFCSDSHHILHT
Trigger: GGTGTGGAGTATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGACAGGGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168533.8
CDS CCA 90 bp TCCGGACTGTTGTCTCCTCTAGAAGATGCATCCTCATGTTCTGGATaGCTGGTATCTCTTCCCCGCAGTCGTCCCCAGCGTAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGLLSPLEDASSCSG*LVSLPRSRPQRSLL
Trigger: AAGAAGGCTACGCTGGGGACGACTGCGGGGAAGAGATACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp CCCTCTGTACTGGCCACTCTGAGTTGCCCATCTCTGTCAGTGTACTaGACCTCGAAGGAGTTAAATTCTCCCTCAGTCACCACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSVLATLSCPSLSVY*TSKELNSPSVTTQE
Trigger: CTCCTGGGTGGTGACTGAGGGAGAATTTAACTCCTTCGAGGTCCAGTACACTGACAGAGATGGGCAACTCAGAGTGGCCAGTACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGCCATACAGGATAAATTaGTACTTGCGTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQPYRIN*YLRPGS
Trigger: GGAACCAGGACGCAAGTACAAATTTATCCTGTATGG...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGCCGTACCGCTTCTTATaGGCAATCCCAAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWPYRFL*AIPNRV
Trigger: CACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGG...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCTTTTCTTCTGGTaGTTTGTCGGTTGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLGLFFW*FVGCAH
Trigger: GTGGGCACAACCGACAAACAACCAGAAGAAAAGCCC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGGCCCACTTTTGTCCTaGAACTGGACCACAAAAGAG +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWGPLLS*NWTTKE
Trigger: CTCTTTTGTGGTCCAGTTCAAGGACAAAAGTGGGCC...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTACTGGATCACGAATaGGTCAAACTGCCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLVLDHE*VKLPLR
Trigger: CCTGAGGGGCAGTTTGACCAATTCGTGATCCAGTAC...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCTCCCATCACTGTCCTaGTACTGGACAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLLPSLS*YWTVKE
Trigger: CTCCTTCACTGTCCAGTACAAGGACAGTGATGGGAG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS TCA 90 bp GAGTCCATACAGGATAAATTTGTACTTGCGTCCTGGTTCCAAGCCTaGGATGGGTGTAGAACGCTGGGGTCCCTCCACGGATATCGCCTG +
Preference number: 5 (lower is better)
Translates to: ESIQDKFVLASWFQA*DGCRTLGSLHGYRL
Trigger: CAGGCGATATCCGTGGAGGGACCCCAGCGTTCTACACCCATCTCAGGCTTGGAACCAGGACGCAAGTACAAATTTATCCTGTATGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 90 bp ATTCGCCCTGATAGAAGCTGGGTAGCTGACTGCATGGCCTCTTTCTaGAGTGACAGTCACCACATACTCCACACCAGGCATCAGATCGGT +
Preference number: 5 (lower is better)
Translates to: IRPDRSWVADCMASF*SDSHHILHTRHQIG
Trigger: ACCGATCTGATGCCTGGTGTGGAGTATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCGTACCGCTTCTTATaGGCAATCCCAAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPYRFL*AIPNRV
Trigger: CACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGCCCATCCCCGTTCTaGTACTGGATCACAAATTGG +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLCPSPF*YWITNW
Trigger: CCAATTTGTGATCCAGTACAAGAACGGGGATGGGCA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCAAAGAGTAGAAACTaGTACTTTCGGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPKSRN*YFRAGS
Trigger: GGAGCCAGCCCGAAAGTACAAGTTTCTACTCTTTGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGTGGCGCTTCCCATCCTaGAGTCCAAAGAGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLWRFPS*SPKSRN
Trigger: GTTTCTACTCTTTGGACTCAAGGATGGGAAGCGCCA...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS TCA 90 bp AGAAGTTCATTTTGTATATTCTTGCAGGGTCCAAGTCAAGGACAGTaGCCTCACGCTGTTCTGCTGTCAGTGGTACCTCCCGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RSSFCIFLQGPSQGQ*PHAVLLSVVPPGAA
Trigger: GGCAGCCCCGGGAGGTACCACTGACAGCAGAACAGCGTGAGGTCACTGTCCTTGACTTGGACCCTGCAAGAATATACAAAATGAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 90 bp AGGTATCTGTGGTTCGATTCCAGGCCAGTAAGGGTAATGTCAGTCTaGTCACCCTCTGTACTGGCCACTCTGAGTTGCCCATCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: RYLWFDSRPVRVMSV*SPSVLATLSCPSLS
Trigger: TGACAGAGATGGGCAACTCAGAGTGGCCAGTACAGAGGGTGACCAGACTGACATTACCCTTACTGGCCTGGAATCGAACCACAGATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCTGTCCATAATGCCTaGGTAGGTGATAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPVHNA*VGDRNR
Trigger: TCTGTTCCTATCACCTACCAAGGCATTATGGACAGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGGCACAACCCCTCAGTCATTTTGTATATTCTaGCAGGGTCCAAGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: EKASLVWHAGSSLGTTPQSFCIF*QGPSQG
Trigger: TCCTTGACTTGGACCCTGCAAGAATATACAAAATGA...CTGAGGGGTTGTGCCCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS CCA 90 bp ACAGGCTGCCCATCATGGAAGCCATATAGGGTTATCAGGTATCTGTaGTTCGATTCCAGGCCAGTAAGGGTAATGTCAGTCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: TGCPSWKPYRVIRYL*FDSRPVRVMSVWSP
Trigger: GGGTGACCAGACTGACATTACCCTTACTGGCCTGGAATCGAACCACAGATACCTGATAACCCTATATGGCTTCCATGATGGGCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS-3UTR CAA 90 bp TGTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGCCATACAGGATAAATTaGTACTTGCGTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: CEIVAEKASLVWHAGSSLPYRIN*YLRPGS
Trigger: GGAACCAGGACGCAAGTACAAATTTATCCTGTATGG...CAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS-3UTR CAA 90 bp GTGAGATTGTGGCAGAGAAGGCCTCCTTGGTGTGGCATGCTGGCTCTTCTCTGGTCATTTTGTATATTCTaGCAGGGTCCAAGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: VRLWQRRPPWCGMLALLWSFCIF*QGPSQG
Trigger: TCCTTGACTTGGACCCTGCAAGAATATACAAAATGA...CCAGAGAAGAGCCAGCATGCCACACCAAGGAGGCCTTCTCTGCCACAATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS GCA 72 bp GGCCCCGGCCACGGCAGTCACGCGGGCACGTCCGCGTaGTACAGTCTTCGCCCGAGTACCCGGGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: GPGHGSHAGTSA*YSLRPSTRAST
Trigger: TGTGCTGGCCCGGGTACTCGGGCGAAGACTGTAGCACGCGGACGTGCCCGCGTGACTGCCGTGGCCGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp CAGGATCTCCAGGCGGACCCTCAGGGCCTGCACCTCTaGAGCAGGCACCGGGGGCTCAGAGCCCGGGGGACA +
Preference number: 6 (lower is better)
Translates to: QDLQADPQGLHL*SRHRGLRARGT
Trigger: TGTCCCCCGGGCTCTGAGCCCCCGGTGCCTGCTTCAGAGGTGCAGGCCCTGAGGGTCCGCCTGGAGATCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGCCACGCCGGCGACAGTCGGCCGGGCAGGTGCGAATaGTGCAGTCTTCGCCCGCATAGCCTGCGTGGCACA +
Preference number: 6 (lower is better)
Translates to: GHAGDSRPGRCE*CSLRPHSLRGT
Trigger: TGTGCCACGCAGGCTATGCGGGCGAAGACTGCAGCATTCGCACCTGCCCGGCCGACTGTCGCCGGCGTGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp CCGGGGAAGCACACGCAGCGTCCTCGGACGCAGCGTCCCTGGTCGTaGCAGTCTTCGGGACAGGACTTGGAGGGCGGCGATGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: PGKHTQRPRTQRPWS*QSSGQDLEGGDEVG
Trigger: GCCCACCTCATCGCCGCCCTCCAAGTCCTGTCCCGAAGACTGCAACGACCAGGGACGCTGCGTCCGAGGACGCTGCGTGTGCTTCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CACGCCGGCGACAGTCGGCCGGGCAGGTGCGAATGCTaGAGTCTTCGCCCGCATAGCCTGCGTGGCACATGC +
Preference number: 6 (lower is better)
Translates to: HAGDSRPGRCEC*SLRPHSLRGTC
Trigger: GCATGTGCCACGCAGGCTATGCGGGCGAAGACTGCAGCATTCGCACCTGCCCGGCCGACTGTCGCCGGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GCCACGAGCCACAGCCCAGGAGAGTCGCAGGGAGTCTaGGGTTGCCTCTGTCACTGCCAGCGTCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: ATSHSPGESQGV*GCLCHCQRPQA
Trigger: GGCCTGGGGACGCTGGCAGTGACAGAGGCAACCCCAGACTCCCTGCGACTCTCCTGGGCTGTGGCTCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp CTGGATGGCACAGTCTGGGCCTCGAAAGCCCTCAACACACACGCATaGTCCGGCGCGGCACAGTTCCCGCGGCCCACAGCCCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LDGTVWASKALNTHA*SGAAQFPRPTAPRA
Trigger: TGCCCTGGGGGCTGTGGGCCGCGGGAACTGTGCCGCGCCGGACAATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GTGGCGCGCTGTAGTCACCGGGTGTGCACCATCGGATaGTGGGCCCACAGCACCCTGCTCCGAGTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: VARCSHRVCTIG*WAHSTLLRVPL
Trigger: AAGCGGGACTCGGAGCAGGGTGCTGTGGGCCCAGCATCCGATGGTGCACACCCGGTGACTACAGCGCGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 72 bp GGGCCCGGGGTCCCCTGGGCCCTGACCAGCAGGAACTaGATCTGTGGTGCCCTCTACAGACACAGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: GPGVPWALTSRN*ICGALYRHRSV
Trigger: CACGGACCTGTGTCTGTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAGGGCCCAGGGGACCCCGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CGCCCCAGATGGCCCGCAGCTGGGCACTGTAGAAGGTaGAGGGGAAGAGGCGCAGAAGCCTGTGCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RPRWPAAGHCRR*RGRGAEACARW
Trigger: CCACCTCGCACAGGCTTCTGCGCCTCTTCCCCTCCACCTTCTACAGTGCCCAGCTGCGGGCCATCTGGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GCGCGCTGTAGTCACCGGGTGTGCACCATCGGATGCTaGGCCCACAGCACCCTGCTCCGAGTCCCGCTTCCT +
Preference number: 6 (lower is better)
Translates to: ARCSHRVCTIGC*AHSTLLRVPLP
Trigger: AGGAAGCGGGACTCGGAGCAGGGTGCTGTGGGCCCAGCATCCGATGGTGCACACCCGGTGACTACAGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 72 bp CCGTCGGCTGCACTGCCCAGCACCTCCGGTTTCGGGTaGCGCGCTGTAGTCACCGGGTGTGCACCATCGGAT +
Preference number: 6 (lower is better)
Translates to: PSAALPSTSGFG*RAVVTGCAPSD
Trigger: ATCCGATGGTGCACACCCGGTGACTACAGCGCGCCACCCGAAACCGGAGGTGCTGGGCAGTGCAGCCGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS GCA 72 bp GGCTCAGGTCAAAGACACCGTGGAGGCTGCAGAGGCTaGGCACGTCAGTCTGGCCTGTGCCAGCTTGGGCCG +
Preference number: 6 (lower is better)
Translates to: GSGQRHRGGCRG*ARQSGLCQLGP
Trigger: CGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp AGGCGCAGCGGCTCAGGTCAAAGACACCGTGGAGGCTaGAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: RRSGSGQRHRGG*RGCARQSGLCQ
Trigger: CTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGTCTTTGACCTGAGCCGCTGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp ACTCGCAGAGCCCATTCAGGCACTGGCCGCGGCCTCTaGAGTCGCTGGGACAGCTGCGAGTGCTGCAGTCGT +
Preference number: 6 (lower is better)
Translates to: TRRAHSGTGRGL*SRWDSCECCSR
Trigger: ACGACTGCAGCACTCGCAGCTGTCCCAGCGACTGCAGAGGCCGCGGCCAGTGCCTGAATGGGCTCTGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGGCTCCAGGCTGGAGATGGTGACCTCACGTTGGTCTaGTGCTGCAGGCACGACCTGGACCTGCCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: GLQAGDGDLTLV*CCRHDLDLPSP
Trigger: AGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAGCTTaGGCCGCAGTGGGACAGCATCCTCCTGTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: QRLRTSVWPVPA*AAVGQHPPVQC
Trigger: GCACTGCACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp ACACCGTGGAGGCTGCAGAGGCTGCGCACGTCAGTCTaGCCTGTGCCAGCTTGGGCCGCAGTGGGACAGCAT +
Preference number: 6 (lower is better)
Translates to: TPWRLQRLRTSV*PVPAWAAVGQH
Trigger: ATGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCACGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GGGAAGCACACGCAGCGTCCTCGGACGCAGCGTCCCTaGTCGTTGCAGTCTTCGGGACAGGACTTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GKHTQRPRTQRP*SLQSSGQDLEG
Trigger: GCCCTCCAAGTCCTGTCCCGAAGACTGCAACGACCAGGGACGCTGCGTCCGAGGACGCTGCGTGTGCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CGTCCTCTCTGGTTGCAGTTGCGAGGGCAAGAGCGCTaGCTGCAGTCAGGGCCTGAGAAGCCCGCGCGACAC +
Preference number: 6 (lower is better)
Translates to: RPLWLQLRGQER*LQSGPEKPARH
Trigger: GTGTCGCGCGGGCTTCTCAGGCCCTGACTGCAGCCAGCGCTCTTGCCCTCGCAACTGCAACCAGAGAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TCCCTGCACGCAGCGCCCACGGCCACGACAATCAGCTaGACAGGTTCGAGTGGCACATGCGGGCCCGGTGTA +
Preference number: 6 (lower is better)
Translates to: SLHAAPTATTIS*TGSSGTCGPGV
Trigger: TACACCGGGCCCGCATGTGCCACTCGAACCTGTCCAGCTGATTGTCGTGGCCGTGGGCGCTGCGTGCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CAGGGCCCCTCGGCCACCTGCATACGCAGCTGGAAGTaGGCAAAGCTGTCAGGCTGGGCAGTCCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: QGPSATCIRSWK*AKLSGWAVQAT
Trigger: TGTGGCCTGGACTGCCCAGCCTGACAGCTTTGCCCACTTCCAGCTGCGTATGCAGGTGGCCGAGGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CAGTGCGTTCAGAACCATCCACAGTCAGCTCCCCGCTaGGGCCCTTGGCTGGTAGCAGTGGCCGCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: QCVQNHPQSAPR*GPWLVAVAASA
Trigger: TGCGCTGGCGGCCACTGCTACCAGCCAAGGGCCCCAGCGGGGAGCTGACTGTGGATGGTTCTGAACGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CAA 72 bp ACAGTCTGGGCCTCGAAAGCCCTCAACACACACGCATaGTCCGGCGCGGCACAGTTCCCGCGGCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: TVWASKALNTHA*SGAAQFPRPTA
Trigger: GGCTGTGGGCCGCGGGAACTGTGCCGCGCCGGACAATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp AAGCTGTCAGGCTGGGCAGTCCAGGCCACACTGAGGCGCCCTGCCTaGTCTCTGCCCAGCACCTTCAACTCTCCCAGCGGGTGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: KLSGWAVQATLRRPA*SLPSTFNSPSGWCS
Trigger: GGAGCACCACCCGCTGGGAGAGTTGAAGGTGCTGGGCAGAGACAAGGCAGGGCGCCTCAGTGTGGCCTGGACTGCCCAGCCTGACAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp ACAGTGCGTTCAGAACCATCCACAGTCAGCTCCCCGCTGGGGCCCTaGGCTGGTAGCAGTGGCCGCCAGCGCAACACCACGCGCTCGAAC +
Preference number: 6 (lower is better)
Translates to: TVRSEPSTVSSPLGP*AGSSGRQRNTTRSN
Trigger: GTTCGAGCGCGTGGTGTTGCGCTGGCGGCCACTGCTACCAGCCAAGGGCCCCAGCGGGGAGCTGACTGTGGATGGTTCTGAACGCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 72 bp GGTCCCCTGGGCCCTGACCAGCAGGAACTGGATCTGTaGTGCCCTCTACAGACACAGGTCCGTGGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: GPLGPDQQELDL*CPLQTQVRGVS
Trigger: GGACACGCCACGGACCTGTGTCTGTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAGGGCCCAGGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp GTGGAGGCTGCAGAGGCTGCGCACGTCAGTCTGGCCTGTGCCAGCTaGGGCCGCAGTGGGACAGCATCCTCCTGTGCAGTGCTCCTTAAG +
Preference number: 6 (lower is better)
Translates to: VEAAEAAHVSLACAS*GRSGTASSCAVLLK
Trigger: CTTAAGGAGCACTGCACAGGAGGATGCTGTCCCACTGCGGCCCAAGCTGGCACAGGCCAGACTGACGTGCGCAGCCTCTGCAGCCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp GAGGACCCCAGCTGGTCCCTCGTAGAGCACGAACAGTaGCCTGGTAGTCCTGTCCAGGCGCCAGTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: EDPSWSLVEHEQ*PGSPVQAPVLA
Trigger: AGCGAGGACTGGCGCCTGGACAGGACTACCAGGTCACTGTTCGTGCTCTACGAGGGACCAGCTGGGGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp GAACTGACCACGGAGCCCGTCCAGGGACACAATCAGTaGGCCGTCGGCTGCACTGCCCAGCACCTCCGGTTT +
Preference number: 6 (lower is better)
Translates to: ELTTEPVQGHNQ*AVGCTAQHLRF
Trigger: AAACCGGAGGTGCTGGGCAGTGCAGCCGACGGCTCACTGATTGTGTCCCTGGACGGGCTCCGTGGTCAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS GCA 72 bp CGCCGTGCTGGCTGCAATCGCGGGGACACCGTCTTATaGCACAGTCCTCACCCGAGTAGCCTTCGTCGCACT +
Preference number: 6 (lower is better)
Translates to: RRAGCNRGDTVL*HSPHPSSLRRT
Trigger: AGTGCGACGAAGGCTACTCGGGTGAGGACTGTGGCATAAGACGGTGTCCCCGCGATTGCAGCCAGCACGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CTCCAGGCTGGAGATGGTGACCTCACGTTGGTCTGCTaGTGCAGGCACGACCTGGACCTGCCCTCCCCTGTT +
Preference number: 6 (lower is better)
Translates to: LQAGDGDLTLVC*CRHDLDLPSPV
Trigger: AACAGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CCCCTGGGCCCTGACCAGCAGGAACTGGATCTGTGGTaGCCTCTACAGACACAGGTCCGTGGCGTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: PLGPDQQELDLW*PLQTQVRGVSL
Trigger: AAGGGACACGCCACGGACCTGTGTCTGTAGAGGGCACCACAGATCCAGTTCCTGCTGGTCAGGGCCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TTGTCTCTGCCCAGCACCTTCAACTCTCCCAGCGGGTaGTGCTCCAGGATCAGGATAGGGGCCTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: LSLPSTFNSPSG*CSRIRIGAWAP
Trigger: AGGGGCCCAGGCCCCTATCCTGATCCTGGAGCACCACCCGCTGGGAGAGTTGAAGGTGCTGGGCAGAGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CGTCCTGGTTCCAAGCCTGAGATGGGTGTAGAACGCTaGGGTCCCTCCACGGATATCGCCTGGGGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: RPGSKPEMGVER*GPSTDIAWGPS
Trigger: AGACGGGCCCCAGGCGATATCCGTGGAGGGACCCCAGCGTTCTACACCCATCTCAGGCTTGGAACCAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GGTGGGCACCGCCTGTGTGGTCAGAGCTTCCTCCTCTaGAGCTGTCACACCTATGGTGGACACAGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GGHRLCGQSFLL*SCHTYGGHRAH
Trigger: GTGGGCCCTGTGTCCACCATAGGTGTGACAGCTCCAGAGGAGGAAGCTCTGACCACACAGGCGGTGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp CAGCGTCCCTGGTCGTTGCAGTCTTCGGGACAGGACTaGGAGGGCGGCGATGAGGTGGGCGTCTTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: QRPWSLQSSGQD*EGGDEVGVFVS
Trigger: GGACACAAAGACGCCCACCTCATCGCCGCCCTCCAAGTCCTGTCCCGAAGACTGCAACGACCAGGGACGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp ACCAGTCACAGTCAGTTCGCCGAGGCGGGGCGGCTCTaGGGACTCCTCTTTCGTCTCTGCAGCAGTAGTGCC +
Preference number: 6 (lower is better)
Translates to: TSHSQFAEAGRL*GLLFRLCSSSA
Trigger: GGCACTACTGCTGCAGAGACGAAAGAGGAGTCCTCAGAGCCGCCCCGCCTCGGCGAACTGACTGTGACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGCAGACGCATCTGCCCTGGATACACTCTCCCCTGCTaGGACAGTCACCTGGGCACGTCTGGATGGCACAGT +
Preference number: 6 (lower is better)
Translates to: GRRICPGYTLPC*DSHLGTSGWHS
Trigger: ACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CTTGGCAGACGCATCTGCCCTGGATACACTCTCCCCTaGTGCGACAGTCACCTGGGCACGTCTGGATGGCAC +
Preference number: 6 (lower is better)
Translates to: LGRRICPGYTLP*CDSHLGTSGWH
Trigger: GTGCCATCCAGACGTGCCCAGGTGACTGTCGCAGCAGGGGAGAGTGTATCCAGGGCAGATGCGTCTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CTGAGAAGAAGGACCACCGGGCTTGGGAGGGGGCCGTaGGGCCGGAAGTGTCACATTAGACCGAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LRRRTTGLGRGP*GRKCHIRPRRE
Trigger: TTCTCTCCTCGGTCTAATGTGACACTTCCGGCCCCACGGCCCCCTCCCAAGCCCGGTGGTCCTTCTTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CAGCCGCAGCCGGCTGACGGGGGCAGGTTAATGCGATaGGTGAACACCACCTGCTTCTCTCCTCCTTCCACA +
Preference number: 6 (lower is better)
Translates to: QPQPADGGRLMR*VNTTCFSPPST
Trigger: TGTGGAAGGAGGAGAGAAGCAGGTGGTGTTCACCCATCGCATTAACCTGCCCCCGTCAGCCGGCTGCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp ACCGTCCACGCAGCGCCCTCCGTCGCCACAGTCCCATaGGCAGGTCCTCATGCTGCAATCTTCGCCACTATA +
Preference number: 6 (lower is better)
Translates to: TVHAAPSVATVP*AGPHAAIFATI
Trigger: TATAGTGGCGAAGATTGCAGCATGAGGACCTGCCCATGGGACTGTGGCGACGGAGGGCGCTGCGTGGACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CTGCCTGGCTGTAGACCCTCTATGGTGACCTCTCGCTaGTCTGCAGCCAAGGACACCGTCTGGAGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LPGCRPSMVTSR*SAAKDTVWSCP
Trigger: TGGGCAGCTCCAGACGGTGTCCTTGGCTGCAGACCAGCGAGAGGTCACCATAGAGGGTCTACAGCCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CTCCGTCGCCACAGTCCCATGGGCAGGTCCTCATGCTaGAATCTTCGCCACTATAGCCGGGATCGCACACAC +
Preference number: 6 (lower is better)
Translates to: LRRHSPMGRSSC*NLRHYSRDRTH
Trigger: GTGTGTGCGATCCCGGCTATAGTGGCGAAGATTGCAGCATGAGGACCTGCCCATGGGACTGTGGCGACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CCTTGGAGGATCTGGGTCTGGGTCCGGCCATCCACCTaGACACTTTGTGGCTCTCCTCCATCTGCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: PWRIWVWVRPST*TLCGSPPSASW
Trigger: CCAGCTAGCAGATGGAGGAGAGCCACAAAGTGTGCAGGTGGATGGCCGGACCCAGACCCAGATCCTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGGACTAGTGGTGGGGTGAGGGTGACGTGGCTGGGATaGTGGGGCACCCGCTGTTTGATGACGCTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: GTSGGVRVTWLG*WGTRCLMTLQE
Trigger: TTCTTGAAGCGTCATCAAACAGCGGGTGCCCCAGCATCCCAGCCACGTCACCCTCACCCCACCACTAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 72 bp GCGACAGTCACCTGGGCACGTCTGGATGGCACAGTCTaGGCCTCGAAAGCCCTCAACACACACGCATTGTCC +
Preference number: 6 (lower is better)
Translates to: ATVTWARLDGTV*ASKALNTHALS
Trigger: GGACAATGCGTGTGTGTTGAGGGCTTTCGAGGCCCAGACTGTGCCATCCAGACGTGCCCAGGTGACTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp GCCAGCATCCAGGGCCGTGATAGTGGCTGTCCGCTCTaGACCCTTTACTGGCACCACCCTGGGCCCACTTTT +
Preference number: 6 (lower is better)
Translates to: ASIQGRDSGCPL*TLYWHHPGPTF
Trigger: AAAAGTGGGCCCAGGGTGGTGCCAGTAAAGGGTCAAGAGCGGACAGCCACTATCACGGCCCTGGATGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp TGCTTCTCTCCTCCTTCCACAGTATGCTCGTACAGCTaGGAAGAAGGACCACCGGGCTTGGGAGGGGGCCGT +
Preference number: 6 (lower is better)
Translates to: CFSPPSTVCSYS*EEGPPGLGGGR
Trigger: ACGGCCCCCTCCCAAGCCCGGTGGTCCTTCTTCTCAGCTGTACGAGCATACTGTGGAAGGAGGAGAGAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp AGGCGTGGCTGGACTGATGGCTTCCCAGGCTGTTCCTaGGCCCTGTCTGTATTCGCCCTGATAGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RRGWTDGFPGCS*ALSVFALIEAG
Trigger: CCCAGCTTCTATCAGGGCGAATACAGACAGGGCTCAGGAACAGCCTGGGAAGCCATCAGTCCAGCCACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168533.8
CDS GCA 72 bp ACATGCACAAGCCATCCTGACACACGCCGTGCTGGCTaGAATCGCGGGGACACCGTCTTATGCCACAGTCCT +
Preference number: 6 (lower is better)
Translates to: TCTSHPDTRRAG*NRGDTVLCHSP
Trigger: AGGACTGTGGCATAAGACGGTGTCCCCGCGATTGCAGCCAGCACGGCGTGTGTCAGGATGGCTTGTGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GTGGTCCGCAGCATTCGTGGGCTCTGTTATGCCCTCTaGAGTGAGGGGGCCAAAGCGTTTCCTTCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: VVRSIRGLCYAL*SEGAKAFPSQK
Trigger: CTTCTGGGAAGGAAACGCTTTGGCCCCCTCACTGCAGAGGGCATAACAGAGCCCACGAATGCTGCGGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGGGAAGAGGCGCAGAAGCCTGTGCGAGGTGGTTCCTaGTGGAAGCAGGATTTCCTGAATCTGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GEEAQKPVRGGS*WKQDFLNLSSR
Trigger: CCTGGAGGACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CGTGGGTTCGCAAGTGATGCTCCAGGTCCTGTACTGTaGCGCGGAAGCGGCTCAGTTCAGTCGTCAGGTTAC +
Preference number: 6 (lower is better)
Translates to: RGFASDAPGPVL*RGSGSVQSSGY
Trigger: GTAACCTGACGACTGAACTGAGCCGCTTCCGCGGCACAGTACAGGACCTGGAGCATCACTTGCGAACCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CCA 72 bp TCAGCTCTCCCAGTTGTGGCCTGGGCTCAGGAGTCATaGTGGGTGGCTCTGTGGACTCCTCTTCCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SALPVVAWAQES*WVALWTPLPPL
Trigger: AAGAGGAGGAAGAGGAGTCCACAGAGCCACCCACCATGACTCCTGAGCCCAGGCCACAACTGGGAGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp ACGGACGGAGACCACAGTCACCTCATAGCGAGTGTCTaGAATCAGCCCTTGGAGGATCTGGGTCTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: TDGDHSHLIASV*NQPLEDLGLGP
Trigger: CGGACCCAGACCCAGATCCTCCAAGGGCTGATTCCAGACACTCGCTATGAGGTGACTGTGGTCTCCGTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp CCTGTATTTTCTATTGGGCTCCAGGCTGGAGATGGTGACCTCACGTaGGTCTGCTGCTGCAGGCACGACCTGGACCTGCCCTCCCCTGTT +
Preference number: 6 (lower is better)
Translates to: PVFSIGLQAGDGDLT*VCCCRHDLDLPSPV
Trigger: AACAGGGGAGGGCAGGTCCAGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCCAATAGAAAATACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp AGAGAGGTGCATGGAGTCAGAGGTCTCCTCTGTCACTaGCAGTTCACCGAGGCGGGGCTGTGGTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: REVHGVRGLLCH*QFTEAGLWCLL
Trigger: GAGAAGACACCACAGCCCCGCCTCGGTGAACTGTCAGTGACAGAGGAGACCTCTGACTCCATGCACCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp CACCCTGGACGTTGGCGGCACCCATTTGACTTTGGCTaGTGTTTCCCCGATGTCGCTGAATTGCAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: HPGRWRHPFDFG*CFPDVAELQVP
Trigger: CGGGACCTGCAATTCAGCGACATCGGGGAAACATCAGCCAAAGTCAAATGGGTGCCGCCAACGTCCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp CTTCTTAGGAGGAGGCTCAGTGGTCACGATGGGCTCTaGCTGTGTGGTCGTAGCTTCCTCCTCAGTCACACC +
Preference number: 6 (lower is better)
Translates to: LLRRRLSGHDGL*LCGRSFLLSHT
Trigger: GGTGTGACTGAGGAGGAAGCTACGACCACACAGGCAGAGCCCATCGTGACCACTGAGCCTCCTCCTAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GAAGAGGCGCAGAAGCCTGTGCGAGGTGGTTCCTGCTaGAAGCAGGATTTCCTGAATCTGTCCTCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: EEAQKPVRGGSC*KQDFLNLSSRG
Trigger: ACCCCTGGAGGACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp AGGTGGAGGGGAAGAGGCGCAGAAGCCTGTGCGAGGTaGTTCCTGCTGGAAGCAGGATTTCCTGAATCTGTC +
Preference number: 6 (lower is better)
Translates to: RWRGRGAEACAR*FLLEAGFPESV
Trigger: GACAGATTCAGGAAATCCTGCTTCCAGCAGGAACCACCTCGCACAGGCTTCTGCGCCTCTTCCCCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp CTCTTCTTCCTCCCACGGCACTGTCAGGGCCTCAATTaGAGCAGAGCCTACAGGCTGCCCATCATGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LFFLPRHCQGLN*SRAYRLPIMEA
Trigger: GGCTTCCATGATGGGCAGCCTGTAGGCTCTGCTCAAATTGAGGCCCTGACAGTGCCGTGGGAGGAAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp ACCACATACTCCACACCAGGCATCAGATCGGTTAGCTaGGTCCTGTCTGCCTCAGGGGGAACTTCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: TTYSTPGIRSVS*VLSASGGTSSR
Trigger: GCGACTGGAAGTTCCCCCTGAGGCAGACAGGACTCAGCTAACCGATCTGATGCCTGGTGTGGAGTATGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp TCTTCTTCCTCCCACGGCACTGTCAGGGCCTCAATTTaGGCAGAGCCTACAGGCTGCCCATCATGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SSSSHGTVRASI*AEPTGCPSWKP
Trigger: TGGCTTCCATGATGGGCAGCCTGTAGGCTCTGCTCAAATTGAGGCCCTGACAGTGCCGTGGGAGGAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GACGGGGGCAGGTTAATGCGATGGGTGAACACCACCTaGTTCTCTCCTCCTTCCACAGTATGCTCGTACAGC +
Preference number: 6 (lower is better)
Translates to: DGGRLMRWVNTT*FSPPSTVCSYS
Trigger: GCTGTACGAGCATACTGTGGAAGGAGGAGAGAAGCAGGTGGTGTTCACCCATCGCATTAACCTGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GGTGGTGATGAAGGCGTAGGACTTGGAAGTCTGTCCTaGCCGTACCCCATGGACCTCCACGTGGTAAGTAGT +
Preference number: 6 (lower is better)
Translates to: GGDEGVGLGSLS*PYPMDLHVVSS
Trigger: ACTACTTACCACGTGGAGGTCCATGGGGTACGGGCAGGACAGACTTCCAAGTCCTACGCCTTCATCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CAA 72 bp CTGTCCACCCTGGACGTTGGCGGCACCCATTTGACTTaGGCTGATGTTTCCCCGATGTCGCTGAATTGCAGG +
Preference number: 6 (lower is better)
Translates to: LSTLDVGGTHLT*ADVSPMSLNCR
Trigger: CCTGCAATTCAGCGACATCGGGGAAACATCAGCCAAAGTCAAATGGGTGCCGCCAACGTCCAGGGTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp AGGCATCCACAGGACCGGGAGCTCGTGTCCACTCTGTCCGGACTGTaGTCTCCTCTAGAAGATGCATCCTCATGTTCTGGATGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: RHPQDRELVSTLSGL*SPLEDASSCSGWLV
Trigger: TACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGTCCGGACAGAGTGGACACGAGCTCCCGGTCCTGTGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp GGGGAACTTCCAGTCGCACCCTTTGGTTTCCAGCACTaGCATAGGACACCACAAATCGGTCCACCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GELPVAPFGFQH*HRTPQIGPPQP
Trigger: AGGCTGAGGTGGACCGATTTGTGGTGTCCTATGTCAGTGCTGGAAACCAAAGGGTGCGACTGGAAGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp ACCTGTATTTTCTATTGGGCTCCAGGCTGGAGATGGTaGCCTCACGTTGGTCTGCTGCTGCAGGCACGACCT +
Preference number: 6 (lower is better)
Translates to: TCIFYWAPGWRW*PHVGLLLQARP
Trigger: AGGTCGTGCCTGCAGCAGCAGACCAACGTGAGGTCACCATCTCCAGCCTGGAGCCCAATAGAAAATACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp ACTTGTATTTCCTGCCTGGCTGTAGACCCTCTATGGTaGCCTCTCGCTGGTCTGCAGCCAAGGACACCGTCT +
Preference number: 6 (lower is better)
Translates to: TCISCLAVDPLW*PLAGLQPRTPS
Trigger: AGACGGTGTCCTTGGCTGCAGACCAGCGAGAGGTCACCATAGAGGGTCTACAGCCAGGCAGGAAATACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GTAGTGGCCTGGTGCTGTATTCGCCCTGATAGAAGCTaGGTAGCTGACTGCATGGCCTCTTTCTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: VVAWCCIRPDRS*VADCMASFCSD
Trigger: GTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGCACCAGGCCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS CAA 72 bp CAGGACCGGGAGCTCGTGTCCACTCTGTCCGGACTGTaGTCTCCTCTAGAAGATGCATCCTCATGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: QDRELVSTLSGL*SPLEDASSCSG
Trigger: TCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGTCCGGACAGAGTGGACACGAGCTCCCGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp CCTGTCTGCCTCAGGGGGAACTTCCAGTCGCACCCTTaGGTTTCCAGCACTGACATAGGACACCACAAATCG +
Preference number: 6 (lower is better)
Translates to: PVCLRGNFQSHP*VSSTDIGHHKS
Trigger: CGATTTGTGGTGTCCTATGTCAGTGCTGGAAACCAAAGGGTGCGACTGGAAGTTCCCCCTGAGGCAGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp CCGTACCGCTTCTTATTGGCAATCCCAAACAGAGTGAACCTGTACTaGCGATTGGGGTCCAGTGGGGAGATCACCACTGAGCGATCAGGC +
Preference number: 6 (lower is better)
Translates to: PYRFLLAIPNRVNLY*RLGSSGEITTERSG
Trigger: GCCTGATCGCTCAGTGGTGATCTCCCCACTGGACCCCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 90 bp GCAGCAGTAGTGCCATCAGCAGTAAGGGGCCCGTACCGCTTCTTATaGGCAATCCCAAACAGAGTGAACCTGTACTTGCGATTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: AAVVPSAVRGPYRFL*AIPNRVNLYLRLGS
Trigger: GGACCCCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGGGCCCCTTACTGCTGATGGCACTACTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp CAGGATAAATTTGTACTTGCGTCCTGGTTCCAAGCCTaGGATGGGTGTAGAACGCTGGGGTCCCTCCACGGA +
Preference number: 6 (lower is better)
Translates to: QDKFVLASWFQA*DGCRTLGSLHG
Trigger: TCCGTGGAGGGACCCCAGCGTTCTACACCCATCTCAGGCTTGGAACCAGGACGCAAGTACAAATTTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp GCCCGTACCGCTTCTTATTGGCAATCCCAAACAGAGTaGACCTGTACTTGCGATTGGGGTCCAGTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: ARTASYWQSQTE*TCTCDWGPVGR
Trigger: TCTCCCCACTGGACCCCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp AAGACGAGGAAGCAGCTTTGCATCAGAGACAGTCTTTaGTTCTGTGGAGACAGGGCCATGGCGCTTCCCATC +
Preference number: 6 (lower is better)
Translates to: KTRKQLCIRDSL*FCGDRAMALPI
Trigger: GATGGGAAGCGCCATGGCCCTGTCTCCACAGAAGCAAAGACTGTCTCTGATGCAAAGCTGCTTCCTCGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TTGTCTCCTCTAGAAGATGCATCCTCATGTTCTGGATaGCTGGTATCTCTTCCCCGCAGTCGTCCCCAGCGT +
Preference number: 6 (lower is better)
Translates to: LSPLEDASSCSG*LVSLPRSRPQR
Trigger: ACGCTGGGGACGACTGCGGGGAAGAGATACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TCATCATGGGTAGCTGTCTTCGCCTCTACAGAGACCTaGCTGCGTCTTTTCCCATCTTGGACCCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SSWVAVFASTET*LRLFPSWTPKS
Trigger: GCTCTTTGGGGTCCAAGATGGGAAAAGACGCAGCCAGGTCTCTGTAGAGGCGAAGACAGCTACCCATGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TGGTTCGATTCCAGGCCAGTAAGGGTAATGTCAGTCTaGTCACCCTCTGTACTGGCCACTCTGAGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: WFDSRPVRVMSV*SPSVLATLSCP
Trigger: TGGGCAACTCAGAGTGGCCAGTACAGAGGGTGACCAGACTGACATTACCCTTACTGGCCTGGAATCGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp TTCCTGAGCCCTGTCTGTATTCGCCCTGATAGAAGCTaGGTAGCTGACTGCATGGCCTCTTTCTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: FLSPVCIRPDRS*VADCMASFCSD
Trigger: GTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGACAGGGCTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168533.8
CDS GCA 72 bp CCCTGTATTCGCCCTGATAGAAGCTGGGTAGCTGACTaGATGGCCTCTTTCTGCAGTGACAGTCACCACATA +
Preference number: 6 (lower is better)
Translates to: PCIRPDRSWVAD*MASFCSDSHHI
Trigger: TATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087399.5
ENSMUST00000238305.2
CDS CCA 72 bp ACTGTTGTCTCCTCTAGAAGATGCATCCTCATGTTCTaGATGGCTGGTATCTCTTCCCCGCAGTCGTCCCCA +
Preference number: 6 (lower is better)
Translates to: TVVSSRRCILMF*MAGISSPQSSP
Trigger: TGGGGACGACTGCGGGGAAGAGATACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp TTGGCAATCCCAAACAGAGTGAACCTGTACTTGCGATaGGGGTCCAGTGGGGAGATCACCACTGAGCGATCA +
Preference number: 6 (lower is better)
Translates to: LAIPNRVNLYLR*GSSGEITTERS
Trigger: TGATCGCTCAGTGGTGATCTCCCCACTGGACCCCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp GTGCCATCAGCAGTAAGGGGCCCGTACCGCTTCTTATaGGCAATCCCAAACAGAGTGAACCTGTACTTGCGA +
Preference number: 6 (lower is better)
Translates to: VPSAVRGPYRFL*AIPNRVNLYLR
Trigger: TCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAATAAGAAGCGGTACGGGCCCCTTACTGCTGATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp TGGCGCTTCCCATCCTTGAGTCCAAAGAGTAGAAACTaGTACTTTCGGGCTGGCTCCAAACCTGAGACGGTG +
Preference number: 6 (lower is better)
Translates to: WRFPSLSPKSRN*YFRAGSKPETV
Trigger: CACCGTCTCAGGTTTGGAGCCAGCCCGAAAGTACAAGTTTCTACTCTTTGGACTCAAGGATGGGAAGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp TCTTATACTTCCTGTTGGACTCCAGGCCGGGGACAGTaGCCTCATTCTCATCACCTTCGATGGGTACACTCT +
Preference number: 6 (lower is better)
Translates to: SYTSCWTPGRGQ*PHSHHLRWVHS
Trigger: AGAGTGTACCCATCGAAGGTGATGAGAATGAGGTCACTGTCCCCGGCCTGGAGTCCAACAGGAAGTATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GTCCACTCTGTCCGGACTGTTGTCTCCTCTAGAAGATaGATCCTCATGTTCTGGATGGCTGGTATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VHSVRTVVSSRR*ILMFWMAGISS
Trigger: GGAAGAGATACCAGCCATCCAGAACATGAGGATGCATCTTCTAGAGGAGACAACAGTCCGGACAGAGTGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS GCA 72 bp GTCTGTATTCGCCCTGATAGAAGCTGGGTAGCTGACTaGATGGCCTCTTTCTGCAGTGACAGTCACCACATA +
Preference number: 6 (lower is better)
Translates to: VCIRPDRSWVAD*MASFCSDSHHI
Trigger: TATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168533.8
CDS GCA 72 bp TGCTGTATTCGCCCTGATAGAAGCTGGGTAGCTGACTaGATGGCCTCTTTCTGCAGTGACAGTCACCACATA +
Preference number: 6 (lower is better)
Translates to: CCIRPDRSWVAD*MASFCSDSHHI
Trigger: TATGTGGTGACTGTCACTGCAGAAAGAGGCCATGCAGTCAGCTACCCAGCTTCTATCAGGGCGAATACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238967.2
CDS TCA 72 bp TTTTGTATATTCTTGCAGGGTCCAAGTCAAGGACAGTaGCCTCACGCTGTTCTGCTGTCAGTGGTACCTCCC +
Preference number: 6 (lower is better)
Translates to: FCIFLQGPSQGQ*PHAVLLSVVPP
Trigger: GGGAGGTACCACTGACAGCAGAACAGCGTGAGGTCACTGTCCTTGACTTGGACCCTGCAAGAATATACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp GTCACTCTGAATCAAGATCTTGGCTTCAGCCATAAGTaGGCCATGCCTCTTCTTGCCGATGAGTCCATACAG +
Preference number: 6 (lower is better)
Translates to: VTLNQDLGFSHK*AMPLLADESIQ
Trigger: CTGTATGGACTCATCGGCAAGAAGAGGCATGGCCCACTTATGGCTGAAGCCAAGATCTTGATTCAGAGTGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CAA 72 bp TTCTTATTGGCAATCCCAAACAGAGTGAACCTGTACTaGCGATTGGGGTCCAGTGGGGAGATCACCACTGAG +
Preference number: 6 (lower is better)
Translates to: FLLAIPNRVNLY*RLGSSGEITTE
Trigger: CTCAGTGGTGATCTCCCCACTGGACCCCAATCGCAAGTACAGGTTCACTCTGTTTGGGATTGCCAATAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS TCA 72 bp GAGGAAGAACTTGTAGGAAGTTTTGGGTTCCAGGCCTaGGATGAGGACTTTGTCCTGGTCTCCATCAACAAG +
Preference number: 6 (lower is better)
Translates to: EEELVGSFGFQA*DEDFVLVSINK
Trigger: CTTGTTGATGGAGACCAGGACAAAGTCCTCATCTCAGGCCTGGAACCCAAAACTTCCTACAAGTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2
CDS CCA 72 bp CCATCATGGAAGCCATATAGGGTTATCAGGTATCTGTaGTTCGATTCCAGGCCAGTAAGGGTAATGTCAGTC +
Preference number: 6 (lower is better)
Translates to: PSWKPYRVIRYL*FDSRPVRVMSV
Trigger: GACTGACATTACCCTTACTGGCCTGGAATCGAACCACAGATACCTGATAACCCTATATGGCTTCCATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087399.5
ENSMUST00000168533.8
ENSMUST00000238305.2
ENSMUST00000238967.2