RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNS3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020422

Ensembl transcript IDs: ENSMUST00000020695.13, ENSMUST00000239091.2, ENSMUST00000239111.2

Found 740 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCCAGGAATTCTCAGAGCCTTCCTGGGGTAGAAGGTTCTGACTaGGGAGACCCTGGCTTTGTCTCCACGGAGCCGGAGCCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: QARNSQSLPGVEGSD*GDPGFVSTEPEPSS
Trigger: GGAGGAGGGCTCCGGCTCCGTGGAGACAAAGCCAGGGTCTCCTCAGTCAGAACCTTCTACCCCAGGAAGGCTCTGAGAATTCCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 90 bp AGGCCAGGCCAGGAATTCTCAGAGCCTTCCTGGGGTAGAAGGTTCTaGCTGAGGAGACCCTGGCTTTGTCTCCACGGAGCCGGAGCCCTC +
Preference number: 1 (lower is better)
Translates to: RPGQEFSEPSWGRRF*LRRPWLCLHGAGAL
Trigger: GAGGGCTCCGGCTCCGTGGAGACAAAGCCAGGGTCTCCTCAGTCAGAACCTTCTACCCCAGGAAGGCTCTGAGAATTCCTGGCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp CCTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTaGGCACAGGAAGCCTGCAGCAGGGGGATGCCCATCTTAGCAAGA +
Preference number: 1 (lower is better)
Translates to: PPPWEGRAYRILPNL*AQEACSRGMPILAR
Trigger: TCTTGCTAAGATGGGCATCCCCCTGCTGCAGGCTTCCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp GACAGCCTTGTCTTCCATGCTCCCTCCTTGTACAGCCCTTGTCCTTaGGGCCCTGATGAGGCATTTCCCGGGCCAAGATCCATCCACTCA +
Preference number: 1 (lower is better)
Translates to: DSLVFHAPSLYSPCP*GPDEAFPGPRSIHS
Trigger: TGAGTGGATGGATCTTGGCCCGGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR GCA 90 bp ACAAGTGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATaGTCTTCCTCCACACAGATGCTAATGAGCCAGGGACTGGGGACA +
Preference number: 1 (lower is better)
Translates to: TSGCHGYSVPVKQDR*SSSTQMLMSQGLGT
Trigger: TGTCCCCAGTCCCTGGCTCATTAGCATCTGTGTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp AACACTAGAAGCCTCTGTGGAAGACATGGGGCCTCTAGGGAATGGTaGCACATTCCCTCTAACAGGCACATCAGAGTGTCCACGAAGGAG +
Preference number: 1 (lower is better)
Translates to: NTRSLCGRHGASREW*HIPSNRHIRVSTKE
Trigger: CTCCTTCGTGGACACTCTGATGTGCCTGTTAGAGGGAATGTGCCACCATTCCCTAGAGGCCCCATGTCTTCCACAGAGGCTTCTAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp TGGAACACTAGAAGCCTCTGTGGAAGACATGGGGCCTCTAGGGAATaGTGGCACATTCCCTCTAACAGGCACATCAGAGTGTCCACGAAG +
Preference number: 1 (lower is better)
Translates to: WNTRSLCGRHGASRE*WHIPSNRHIRVSTK
Trigger: CTTCGTGGACACTCTGATGTGCCTGTTAGAGGGAATGTGCCACCATTCCCTAGAGGCCCCATGTCTTCCACAGAGGCTTCTAGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 90 bp AAGATGACTCAGCAAATCAAACGTAGCCGTGAGTGCTGGAGTTCTTaGTCTTTCCCTTCATCCCTTCTCCCCCTCTGGACCCCACAGAAG +
Preference number: 1 (lower is better)
Translates to: KMTQQIKRSRECWSS*SFPSSLLPLWTPQK
Trigger: CTTCTGTGGGGTCCAGAGGGGGAGAAGGGATGAAGGGAAAGATCAAGAACTCCAGCACTCACGGCTACGTTTGATTTGCTGAGTCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR GCA 90 bp GATGTAGAAAGACAAGATGAGGGAGCATTTCTGCTGACAAGTGGGTaGCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCC +
Preference number: 1 (lower is better)
Translates to: DVERQDEGAFLLTSG*HGYSVPVKQDRCSS
Trigger: GGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCACTTGTCAGCAGAAATGCTCCCTCATCTTGTCTTTCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp TCAGAGTGTCCACGAAGGAGGTCCTTAAAGACCAAGGCAAACATTTaGCACAGAAATGAGGCACTTGCTTTTGGTGCATCAATAGGAGCT +
Preference number: 1 (lower is better)
Translates to: SECPRRRSLKTKANI*HRNEALAFGASIGA
Trigger: AGCTCCTATTGATGCACCAAAAGCAAGTGCCTCATTTCTGTGCCAAATGTTTGCCTTGGTCTTTAAGGACCTCCTTCGTGGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 90 bp GGCCTTGTAGCAAAAGCCTGGGCAATACTCCTTTCGCAGTGTTTCTaGGCACACGGTATAGTCTATGATACTGTTCTTGTTCTGTTCAAT +
Preference number: 1 (lower is better)
Translates to: GLVAKAWAILLSQCF*AHGIVYDTVLVLFN
Trigger: ATTGAACAGAACAAGAACAGTATCATAGACTATACCGTGTGCTCAGAAACACTGCGAAAGGAGTATTGCCCAGGCTTTTGCTACAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 90 bp TGGAATAGTCCACCTGTATACACACAGACATACATGAGCAAAAAGTaGAATGGTCCACCTGTATACACACAGACATACATGAGCAAAAAG +
Preference number: 1 (lower is better)
Translates to: WNSPPVYTQTYMSKK*NGPPVYTQTYMSKK
Trigger: CTTTTTGCTCATGTATGTCTGTGTGTATACAGGTGGACCATTCCACTTTTTGCTCATGTATGTCTGTGTGTATACAGGTGGACTATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTCCCTTCTCCCCCTCTaGACCCCACAGAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSLLPL*TPQKFP
Trigger: GGGGAACTTCTGTGGGGTCCAGAGGGGGAGAAGGGA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp AATGAGCCAGGGACTGGGGACAGCCTTGTCTTCCATGCTCCCTCCTaGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGGG +
Preference number: 2 (lower is better)
Translates to: NEPGTGDSLVFHAPS*YSPCPWGPDEAFPG
Trigger: CCCGGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCCCTGGCTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTACGAATGGGGGCCCTaGCTCACCCCACTGCCATGT +
Preference number: 2 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVYEWGP*LTPLPC
Trigger: ACATGGCAGTGGGGTGAGGCAGGGCCCCCATTCGTA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp TCTTCCTCCACACAGATGCTAATGAGCCAGGGACTGGGGACAGCCTaGTCTTCCATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCC +
Preference number: 2 (lower is better)
Translates to: SSSTQMLMSQGLGTA*SSMLPPCTALVLGA
Trigger: GGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCCCTGGCTCATTAGCATCTGTGTGGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGATGTTGAGGGCCCTATaGGGCATCTGGCAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVMLRAL*GIWQVW
Trigger: CCAAACCTGCCAGATGCCTCATAGGGCCCTCAACAT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGAGGGAGCATTTCTGCTaGCAAGTGGGTGCCATGGCT +
Preference number: 2 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVREHFC*QVGAMA
Trigger: AGCCATGGCACCCACTTGTCAGCAGAAATGCTCCCT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCTGCAGCATTTGACATaGGTACGGTATGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLQHLT*VRYGNG
Trigger: GCCATTGCCATACCGTACCCATGTCAAATGCTGCAG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTCCCTTCTCCCCCTCTaGACCCCACAGAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSSLLPL*TPQKFP
Trigger: GGGGAACTTCTGTGGGGTCCAGAGGGGGAGAAGGGA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGACAAGACATGTTGCTaGGCCAGGCAGAGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSDKTCC*ARQRVG
Trigger: CCCTACCCTCTGCCTGGCGCAGCAACATGTCTTGTC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCTGCAGCATTTGACATaGGTACGGTATGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVLQHLT*VRYGNG
Trigger: GCCATTGCCATACCGTACCCATGTCAAATGCTGCAG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCAGCCTTGTCTTCCATaGTCCCTCCTTGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSQPCLP*SLLVQP
Trigger: GGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGACAAGACATGTTGCTaGGCCAGGCAGAGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: CSRGMPILARTITPDSVTDKTCC*ARQRVG
Trigger: CCCTACCCTCTGCCTGGCGCAGCAACATGTCTTGTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGATTTCTGCTGACAAGTaGGTGCCATGGCTACTCAGT +
Preference number: 2 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVISADK*VPWLLS
Trigger: ACTGAGTAGCCATGGCACCCACTTGTCAGCAGAAAT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCAAGGCCAGTCAGTGGTaGCATTGTTTGTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPKASQW*HCLFLV
Trigger: AACCAAGAACAAACAATGTCACCACTGACTGGCCTT...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGTAGAAGGTTCTGACTaGGGAGACCCTGGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSVEGSD*GDPGFV
Trigger: GACAAAGCCAGGGTCTCCTCAGTCAGAACCTTCTAC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATACGAATGGGGGCCCTaGCTCACCCCACTGCCATGT +
Preference number: 2 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIYEWGP*LTPLPC
Trigger: ACATGGCAGTGGGGTGAGGCAGGGCCCCCATTCGTA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGACATGGGTACGGTATaGCAATGGCAAGCGGTTATA +
Preference number: 2 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQDMGTV*QWQAVI
Trigger: TATAACCGCTTGCCATTGCCATACCGTACCCATGTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACCTCCACCTCCACCCTaGGAAGGACGGGCTTACCGC +
Preference number: 2 (lower is better)
Translates to: KNPSLTTVACPGREMWKLPPPPP*EGRAYR
Trigger: GCGGTAAGCCCGTCCTTCCCAGGGTGGAGGTGGAGG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTACCCCTGCCCCCATCTaGAGTTTAGCTGCATATGAG +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSTPAPI*SLAAYE
Trigger: CTCATATGCAGCTAAACTCCAGATGGGGGCAGGGGT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATGTAGAAAGACAAGATaGGGGAGCATTTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQCRKTR*GSISAD
Trigger: GTCAGCAGAAATGCTCCCTCATCTTGTCTTTCTACA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGTCAAGCAGGACAGATaGTCTTCCTCCACACAGATG +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSVKQDR*SSSTQM
Trigger: CATCTGTGTGGAGGAAGAGCATCTGTCCTGCTTGAC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp GAAAGCACATTCGTGTGGCTTCTTGGATGCATTCCATGCCAACCTTaGTGGCATTCAATTCACCGGAAAGCTGGGCTTCAGCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: ESTFVWLLGCIPCQP*WHSIHRKAGLQQSP
Trigger: TGGGCTCTGCTGAAGCCCAGCTTTCCGGTGAATTGAATGCCACAAAGGTTGGCATGGAATGCATCCAAGAAGCCACACGAATGTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAATGTTGAGGGCCCTATaGGGCATCTGGCAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIMLRAL*GIWQVW
Trigger: CCAAACCTGCCAGATGCCTCATAGGGCCCTCAACAT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACTGGGCACAGGAAGCCTaGAGCAGGGGGATGCCCATC +
Preference number: 2 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHWAQEA*SRGMPI
Trigger: GATGGGCATCCCCCTGCTGCAGGCTTCCTGTGCCCA...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTAAGGCCAGTCAGTGGTaGCATTGTTTGTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSKASQW*HCLFLV
Trigger: AACCAAGAACAAACAATGTCACCACTGACTGGCCTT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGACATGGGTACGGTATaGCAATGGCAAGCGGTTATA +
Preference number: 2 (lower is better)
Translates to: CSRGMPILARTITPDSVTDMGTV*QWQAVI
Trigger: TATAACCGCTTGCCATTGCCATACCGTACCCATGTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCTGCAGCATTTGACATaGGTACGGTATGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGLQHLT*VRYGNG
Trigger: GCCATTGCCATACCGTACCCATGTCAAATGCTGCAG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTAAAACCATCTGCATCTaGACAAGACATGTTGCTGCG +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSKTICI*TRHVAA
Trigger: CGCAGCAACATGTCTTGTCCAGATGCAGATGGTTTT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAATGTTGAGGGCCCTATaGGGCATCTGGCAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: KNPSLTTVACPGREMWKLMLRAL*GIWQVW
Trigger: CCAAACCTGCCAGATGCCTCATAGGGCCCTCAACAT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCATCTCTGCCCCTTTTaGAACAGAATTCACCACAAA +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSHLCPF*NRIHHK
Trigger: TTTGTGGTGAATTCTGTTTCAAAAGGGGCAGAGATG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACAGCCTTGTCTTCCATaGTCCCTCCTTGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: KNPSLTTVACPGREMWKLQPCLP*SLLVQP
Trigger: GGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCTGCATATGAGTAACTaGAACACTAGAAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSLHMSN*NTRSLC
Trigger: ACAGAGGCTTCTAGTGTTCCAGTTACTCATATGCAG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCTGTAGAAAGACAAGATaGGGGAGCATTTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGCRKTR*GSISAD
Trigger: GTCAGCAGAAATGCTCCCTCATCTTGTCTTTCTACA...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGTAGAAGGTTCTGACTaGGGAGACCCTGGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: KNPSLTTVACPGREMWKLVEGSD*GDPGFV
Trigger: GACAAAGCCAGGGTCTCCTCAGTCAGAACCTTCTAC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACCTCCACCTCCACCCTaGGAAGGACGGGCTTACCGC +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTPPPPP*EGRAYR
Trigger: GCGGTAAGCCCGTCCTTCCCAGGGTGGAGGTGGAGG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTACACATGAGCAAAAATaGAATAGTCCACCTGTACAC +
Preference number: 2 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSTHEQK*NSPPVH
Trigger: GTGTACAGGTGGACTATTCCATTTTTGCTCATGTGT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAAGGCCAGTCAGTGGTaGCATTGTTTGTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIKASQW*HCLFLV
Trigger: AACCAAGAACAAACAATGTCACCACTGACTGGCCTT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACAGCCTGTCCTGGACGTaGAATGTGGAAGCTAGGTCT +
Preference number: 2 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHSLSWT*NVEARS
Trigger: AGACCTAGCTTCCACATTTCACGTCCAGGACAGGCT...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATACGAATGGGGGCCCTaGCTCACCCCACTGCCATGT +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTYEWGP*LTPLPC
Trigger: ACATGGCAGTGGGGTGAGGCAGGGCCCCCATTCGTA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGACATGGGTACGGTATaGCAATGGCAAGCGGTTATA +
Preference number: 2 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHDMGTV*QWQAVI
Trigger: TATAACCGCTTGCCATTGCCATACCGTACCCATGTC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGTTGAGTCTGGAATGTaGAGATTGTCAATCTGGTAC +
Preference number: 2 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHVESGM*RLSIWY
Trigger: GTACCAGATTGACAATCTTCACATTCCAGACTCAAC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACTTGTGCCCAACCGATaGCCTTGTAGCAAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLVPNR*PCSKSL
Trigger: CAGGCTTTTGCTACAAGGCCATCGGTTGGGCACAAG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp TTGTTTGTTCTTGGTTTGAAGAGTTGTCATATTCTTCTCCTCTTGTaGAGTCTGGAATGTGAAGATTGTCAATCTGGTACGAATGGGGGC +
Preference number: 2 (lower is better)
Translates to: LFVLGLKSCHILLLL*SLECEDCQSGTNGG
Trigger: GCCCCCATTCGTACCAGATTGACAATCTTCACATTCCAGACTCAACAAGAGGAGAAGAATATGACAACTCTTCAAACCAAGAACAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp AGAGCTGTCTTCCTGTGTTTCCTCAGATCAGATCCATTGATACCCTaGACTACTTTTATCTTGAGTAAAAATCATACCTCACCGGTCAGT +
Preference number: 2 (lower is better)
Translates to: RAVFLCFLRSDPLIP*TTFILSKNHTSPVS
Trigger: ACTGACCGGTGAGGTATGATTTTTACTCAAGATAAAAGTAGTCAAGGGTATCAATGGATCTGATCTGAGGAAACACAGGAAGACAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATCAGCAGAGCCCAGCTaGTTTCTAATTAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSAEPS*FLIRPS
Trigger: AGAGGGCCTAATTAGAAATCAGCTGGGCTCTGCTGA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAATTTCTGCTGACAAGTaGGTGCCATGGCTACTCAGT +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTISADK*VPWLLS
Trigger: ACTGAGTAGCCATGGCACCCACTTGTCAGCAGAAAT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACTTGTAGCAAAAGCCTaGGCAATACTCCTTTCGCAG +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLVAKA*AILLSQ
Trigger: CTGCGAAAGGAGTATTGCCCAGGCTTTTGCTACAAG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp ACATTGTTTGTTCTTGGTTTGAAGAGTTGTCATATTCTTCTCCTCTaGTTGAGTCTGGAATGTGAAGATTGTCAATCTGGTACGAATGGG +
Preference number: 2 (lower is better)
Translates to: TLFVLGLKSCHILLL*LSLECEDCQSGTNG
Trigger: CCCATTCGTACCAGATTGACAATCTTCACATTCCAGACTCAACAAGAGGAGAAGAATATGACAACTCTTCAAACCAAGAACAAACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 90 bp GACAGTTGTAGAGCTGTCTTCCTGTGTTTCCTCAGATCAGATCCATaGATACCCTTGACTACTTTTATCTTGAGTAAAAATCATACCTCA +
Preference number: 2 (lower is better)
Translates to: DSCRAVFLCFLRSDP*IPLTTFILSKNHTS
Trigger: TGAGGTATGATTTTTACTCAAGATAAAAGTAGTCAAGGGTATCAATGGATCTGATCTGAGGAAACACAGGAAGACAGCTCTACAACTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGTTGAGTCTGGAATGTaGAGATTGTCAATCTGGTAC +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTVESGM*RLSIWY
Trigger: GTACCAGATTGACAATCTTCACATTCCAGACTCAAC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATACATGAGCAAAAAGTaGAATGGTCCACCTGTATAC +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTYMSKK*NGPPVY
Trigger: GTATACAGGTGGACCATTCCACTTTTTGCTCATGTA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAACACGGTATAGTCTATaGTACTGTTCTTGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTTRYSL*YCSCSV
Trigger: AACAGAACAAGAACAGTATCATAGACTATACCGTGT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 72 bp CCCAGCAGTGGCTCTCAGACCCCACGTGGTCCTCCCTaGCCCCAGAGGCTTTCTCCACTGCCCTCACCTCAC +
Preference number: 3 (lower is better)
Translates to: PSSGSQTPRGPP*PQRLSPLPSPH
Trigger: GTGAGGTGAGGGCAGTGGAGAAAGCCTCTGGGGTCAGGGAGGACCACGTGGGGTCTGAGAGCCACTGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp GTCTTCCATGCTCCCTCCTTGTACAGCCCTTGTCCTTaGGGCCCTGATGAGGCATTTCCCGGGCCAAGATCC +
Preference number: 3 (lower is better)
Translates to: VFHAPSLYSPCP*GPDEAFPGPRS
Trigger: GGATCTTGGCCCGGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGACTGGGGACAGCCTaGTCTTCCATGCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGLGTA*SSMLPP
Trigger: AGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTTCCATGCTCCCTCCTaGTACAGCCCTTGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHFHAPS*YSPCPW
Trigger: CCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAGTCGGCTGCAGCATTaGACATGGGTACGGTATGGC +
Preference number: 3 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQSRLQH*TWVRYG
Trigger: GCCATACCGTACCCATGTCAAATGCTGCAGCCGACT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 72 bp AATTCTCAGAGCCTTCCTGGGGTAGAAGGTTCTGACTaGGGAGACCCTGGCTTTGTCTCCACGGAGCCGGAG +
Preference number: 3 (lower is better)
Translates to: NSQSLPGVEGSD*GDPGFVSTEPE
Trigger: CTCCGGCTCCGTGGAGACAAAGCCAGGGTCTCCTCAGTCAGAACCTTCTACCCCAGGAAGGCTCTGAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR GCA 72 bp TACCGCATTCTTCCGAATCTCTGGGCACAGGAAGCCTaGAGCAGGGGGATGCCCATCTTAGCAAGAACCATC +
Preference number: 3 (lower is better)
Translates to: YRILPNLWAQEA*SRGMPILARTI
Trigger: GATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCAGGCTTCCTGTGCCCAGAGATTCGGAAGAATGCGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp AGCCTCTGTGGAAGACATGGGGCCTCTAGGGAATGGTaGCACATTCCCTCTAACAGGCACATCAGAGTGTCC +
Preference number: 3 (lower is better)
Translates to: SLCGRHGASREW*HIPSNRHIRVS
Trigger: GGACACTCTGATGTGCCTGTTAGAGGGAATGTGCCACCATTCCCTAGAGGCCCCATGTCTTCCACAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGGACTGGGGACAGCCTaGTCTTCCATGCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGGLGTA*SSMLPP
Trigger: AGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR GCA 72 bp TGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATaGTCTTCCTCCACACAGATGCTAATGAGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: CHGYSVPVKQDR*SSSTQMLMSQG
Trigger: TCCCTGGCTCATTAGCATCTGTGTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR GCA 72 bp GAACAAAACCATCTGCATCTGGACAAGACATGTTGCTaGGCCAGGCAGAGGGTAGGGAGGCTGCTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: EQNHLHLDKTCC*ARQRVGRLLKA
Trigger: TGCCTTAAGCAGCCTCCCTACCCTCTGCCTGGCGCAGCAACATGTCTTGTCCAGATGCAGATGGTTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp AGAAGCCTCTGTGGAAGACATGGGGCCTCTAGGGAATaGTGGCACATTCCCTCTAACAGGCACATCAGAGTG +
Preference number: 3 (lower is better)
Translates to: RSLCGRHGASRE*WHIPSNRHIRV
Trigger: CACTCTGATGTGCCTGTTAGAGGGAATGTGCCACCATTCCCTAGAGGCCCCATGTCTTCCACAGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTTCCATGCTCCCTCCTaGTACAGCCCTTGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: CSRGMPILARTITPDSVTFHAPS*YSPCPW
Trigger: CCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGATTCTTCTCCTCTTGTaGAGTCTGGAATGTGAAGAT +
Preference number: 3 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRILLLL*SLECED
Trigger: ATCTTCACATTCCAGACTCAACAAGAGGAGAAGAAT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCATATTCTTCTCCTCTaGTTGAGTCTGGAATGTGAA +
Preference number: 3 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHHILLL*LSLECE
Trigger: TTCACATTCCAGACTCAACAAGAGGAGAAGAATATG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 72 bp CCTCCTAGTAATCACAGCTTAGTCGGCTGCAGCATTTaGCATGGGTACGGTATGGCAATGGCAAGCGGTTAT +
Preference number: 3 (lower is better)
Translates to: PPSNHSLVGCSI*HGYGMAMASGY
Trigger: ATAACCGCTTGCCATTGCCATACCGTACCCATGTCAAATGCTGCAGCCGACTAAGCTGTGATTACTAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAAGTCGGCTGCAGCATTaGACATGGGTACGGTATGGC +
Preference number: 3 (lower is better)
Translates to: KNPSLTTVACPGREMWKLSRLQH*TWVRYG
Trigger: GCCATACCGTACCCATGTCAAATGCTGCAGCCGACT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 72 bp TTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTaGCTATATAGGTGTGTCGGAAGAGCAGCTTCTTTA +
Preference number: 3 (lower is better)
Translates to: FPGPRSIHSKCA*LYRCVGRAASL
Trigger: TAAAGAAGCTGCTCTTCCGACACACCTATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp TCCAGCGGGAGGAAAAGAGTGCGGGGCTGTGATCTCTaGGCCACATCTGCATATAAACTTATAATCATAGGA +
Preference number: 3 (lower is better)
Translates to: SSGRKRVRGCDL*ATSAYKLIIIG
Trigger: TCCTATGATTATAAGTTTATATGCAGATGTGGCCCAGAGATCACAGCCCCGCACTCTTTTCCTCCCGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGAGGAGACCCTGGCTTaGTCTCCACGGAGCCGGAGC +
Preference number: 3 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTEETLA*SPRSRS
Trigger: GCTCCGGCTCCGTGGAGACAAAGCCAGGGTCTCCTC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTATTCTTCTCCTCTTGTaGAGTCTGGAATGTGAAGAT +
Preference number: 3 (lower is better)
Translates to: CSRGMPILARTITPDSVTILLLL*SLECED
Trigger: ATCTTCACATTCCAGACTCAACAAGAGGAGAAGAAT...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCATATTCTTCTCCTCTaGTTGAGTCTGGAATGTGAA +
Preference number: 3 (lower is better)
Translates to: CSRGMPILARTITPDSVTHILLL*LSLECE
Trigger: TTCACATTCCAGACTCAACAAGAGGAGAAGAATATG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR TCA 72 bp CCTTTCGCAGTGTTTCTGAGCACACGGTATAGTCTATaGTACTGTTCTTGTTCTGTTCAATACACGCGTCAC +
Preference number: 3 (lower is better)
Translates to: PFAVFLSTRYSL*YCSCSVQYTRH
Trigger: GTGACGCGTGTATTGAACAGAACAAGAACAGTATCATAGACTATACCGTGTGCTCAGAAACACTGCGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATCTTGGTTTGAAGAGTaGTCATATTCTTCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYISWFEE*SYSSPL
Trigger: AAGAGGAGAAGAATATGACAACTCTTCAAACCAAGA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAGTCGGCTGCAGCATTaGACATGGGTACGGTATGGC +
Preference number: 3 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSRLQH*TWVRYG
Trigger: GCCATACCGTACCCATGTCAAATGCTGCAGCCGACT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCATATTCTTCTCCTCTaGTTGAGTCTGGAATGTGAA +
Preference number: 3 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHHILLL*LSLECE
Trigger: TTCACATTCCAGACTCAACAAGAGGAGAAGAATATG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATCTTGGTTTGAAGAGTaGTCATATTCTTCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: KNPSLTTVACPGREMWKLSWFEE*SYSSPL
Trigger: AAGAGGAGAAGAATATGACAACTCTTCAAACCAAGA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp GAGAAGGTTAATGGGACCCTGGCTATCTATTGGAAGTaGTGGGACATCATTGAATTTACTCATAGAATAATG +
Preference number: 3 (lower is better)
Translates to: EKVNGTLAIYWK*WDIIEFTHRIM
Trigger: CATTATTCTATGAGTAAATTCAATGATGTCCCACCACTTCCAATAGATAGCCAGGGTCCCATTAACCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp GTTAATGAGAAGGTTAATGGGACCCTGGCTATCTATTaGAAGTGGTGGGACATCATTGAATTTACTCATAGA +
Preference number: 3 (lower is better)
Translates to: VNEKVNGTLAIY*KWWDIIEFTHR
Trigger: TCTATGAGTAAATTCAATGATGTCCCACCACTTCCAATAGATAGCCAGGGTCCCATTAACCTTCTCATTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp TCTTTAAGGCCAGTCAGTGGTGACATTGTTTGTTCTTaGTTTGAAGAGTTGTCATATTCTTCTCCTCTTGTT +
Preference number: 3 (lower is better)
Translates to: SLRPVSGDIVCS*FEELSYSSPLV
Trigger: AACAAGAGGAGAAGAATATGACAACTCTTCAAACCAAGAACAAACAATGTCACCACTGACTGGCCTTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CCA 72 bp AAGGTTAATGGGACCCTGGCTATCTATTGGAAGTGGTaGGACATCATTGAATTTACTCATAGAATAATGTAC +
Preference number: 3 (lower is better)
Translates to: KVNGTLAIYWKW*DIIEFTHRIMY
Trigger: GTACATTATTCTATGAGTAAATTCAATGATGTCCCACCACTTCCAATAGATAGCCAGGGTCCCATTAACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAACATCTCTGCCCCTTTaGAAACAGAATTCACCACAA +
Preference number: 3 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTTSLPL*KQNSPQ
Trigger: TTGTGGTGAATTCTGTTTCAAAAGGGGCAGAGATGT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATCTATGATACTGTTCTaGTTCTGTTCAATACACGCG +
Preference number: 3 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSMILF*FCSIHA
Trigger: CGCGTGTATTGAACAGAACAAGAACAGTATCATAGA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATCTTGGTTTGAAGAGTaGTCATATTCTTCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSWFEE*SYSSPL
Trigger: AAGAGGAGAAGAATATGACAACTCTTCAAACCAAGA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGGGCTCAGGTGGACTaGACGGAGGGTAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGAQVD*TEGSVA
Trigger: CGCCACGCTACCCTCCGTTCAGTCCACCTGAGCCCC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGAAGGACCCAGGTGGGTaGACTGGGGCCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLKDPGG*TGALQR
Trigger: CCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTGCGGCTGCCAAGCCTaGCCTCCCCATCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLCGCQA*PPHLRQ
Trigger: TTGCCTCAGATGGGGAGGCCAGGCTTGGCAGCCGCA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTCCCAGGCTTGGGGCTaGGTCCACTCCAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLSQAWG*VHSSLS
Trigger: GGAAAGGCTGGAGTGGACCCAGCCCCAAGCCTGGGA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAGGCCTGGACTGTGGTaGCTGCTGGCTCCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRRPGLW*LLAPGD
Trigger: GTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCCAGGCCAAATCCACTaGGCAGCTGGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLPGQIH*AAGPAQ
Trigger: CTGAGCTGGACCAGCTGCTCAGTGGATTTGGCCTGG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGGGCTCAGGTGGACTaGACGGAGGGTAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGAQVD*TEGSVA
Trigger: CGCCACGCTACCCTCCGTTCAGTCCACCTGAGCCCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTCCAACGGGGCTCTCTaGCATCCCCACAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLSNGAL*HPHSVA
Trigger: AGCCACACTGTGGGGATGTCAGAGAGCCCCGTTGGA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCCACTGTGCTGCGGCTaGCAAGCCTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPPLCCG*QAWPPH
Trigger: ATGGGGAGGCCAGGCTTGGCAGCCGCAGCACAGTGG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCTGGGCCGGCTCAATaGCGATGCGGATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVAGPAQ*RCGSCW
Trigger: CCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGACGGTTGGGAGTAACTaGGATGTGGGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLTVGSN*DVGWGL
Trigger: CAGCCCCCACCCCACATCCCAGTTACTCCCAACCGT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTCCCAGGCTTGGGGCTaGGTCCACTCCAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSQAWG*VHSSLS
Trigger: GGAAAGGCTGGAGTGGACCCAGCCCCAAGCCTGGGA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTGCAGGCCTGGACTGTaGTGGCTGCTGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVCRPGL*WLLAPG
Trigger: ACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCTGGTTCTGCAGGCCTaGACTGTGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLVLQA*TVVAAG
Trigger: GCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGTGTGGCCACCTTCATaGCCAGGCCGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPVWPPS*PGRRPL
Trigger: GAGGGGCCTACGGCCTGGCCATGAAGGTGGCCACAC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCACCCCTGCAGTGGATaGCGACCACATGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVHPCSG*RPHAGG
Trigger: ACCCCCAGCATGTGGTCGTCATCCACTGCAGGGGTG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCACCCCTGCAGTGGATaGCGACCACATGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPHPCSG*RPHAGG
Trigger: ACCCCCAGCATGTGGTCGTCATCCACTGCAGGGGTG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGACTGCAGGCGGAAAATaGCATCACGGGTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRTAGGK*HHGWPS
Trigger: GCTCGGCCACCCGTGATGTCATTTTCCGCCTGCAGT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAGCTCAGCCTTCTCCTaGGGGCTCAGGCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSSAFS*GLRPLR
Trigger: ACGAAGAGGCCTGAGCCCTCAGGAGAAGGCTGAGCT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTCCAACGGGGCTCTCTaGCATCCCCACAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSNGAL*HPHSVA
Trigger: AGCCACACTGTGGGGATGTCAGAGAGCCCCGTTGGA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGAGCACCCTGAGGCTCTaGCATGGACAGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLSTLRL*HGQLMA
Trigger: AGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCCGGCTCAATGGCGATaGGGATCCTGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLPAQWR*GSCWGF
Trigger: AAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGAACAGCCACTCTGCTaGTGGCTCCACGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHREQPLC*WLHGWE
Trigger: CTCCCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGAGGGGATGCTCATGGTaGTGCCACTGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVRGCSW*CHCGGW
Trigger: CCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCTTCAGCAGCTCGGCTaGAGAGTTGGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLLQQLG*RVGCCL
Trigger: CAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTGGTCCAGGTGGACTTaGACAGAGCAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLWSRWT*TEQGVT
Trigger: GGTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGAGGGTGTGGTCTCCGTaGTCTGGACTGCTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLRVWSP*SGLLVA
Trigger: AGCCACTAGCAGTCCAGACCACGGAGACCACACCCT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCCCATAGGCCTGCACTaGGGTGGGTGCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVPIGLH*GGCRGL
Trigger: AAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTGCGGCTGCCAAGCCTaGCCTCCCCATCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPCGCQA*PPHLRQ
Trigger: TTGCCTCAGATGGGGAGGCCAGGCTTGGCAGCCGCA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCAGAGTAGGAGAGCCTaGGGAGGAGCCAGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRQSRRA*GGASVR
Trigger: CCGAACACTGGCTCCTCCCCAGGCTCTCCTACTCTG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGGGCATTCAGGTGTGTaGGGATGGGCTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLGHSGV*GWAQRW
Trigger: CCACCTTTGAGCCCATCCCCACACACCTGAATGCCC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCTGGGCTGCTCAGCTaGGGCTCAGGTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVAGLLS*GSGGLN
Trigger: GTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGACCTTTGTGCAAACTaGCTGGGCTGCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLDLCAN*LGCSAG
Trigger: CCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGGCAGGCTCACGTTCTaGTTCTGCAGGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRGRLTF*FCRPGL
Trigger: CAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGGAGAACAGCAGGTGTaGGACTCTCAGGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLGEQQV*DSQEPG
Trigger: ACCAGGCTCCTGAGAGTCCCACACCTGCTGTTCTCC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp GGGACTGGGGACAGCCTTGTCTTCCATGCTCCCTCCTaGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTGDSLVFHAPS*YSPCPWGPDEA
Trigger: TGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGACTGCAGGCGGAAAATaGCATCACGGGTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVTAGGK*HHGWPS
Trigger: GCTCGGCCACCCGTGATGTCATTTTCCGCCTGCAGT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGACCTGAGTCGCTGCTaGCTGACAGGGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDLSRC*LTGCGL
Trigger: GAGACCACACCCTGTCAGTCAGCAGCGACTCAGGTC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGCGGAGGCAGTAGAATaGCCTGAGTCGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRAEAVE*PESLLT
Trigger: AGTCAGCAGCGACTCAGGTCATTCTACTGCCTCCGC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCCAGGCCAAATCCACTaGGCAGCTGGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVPGQIH*AAGPAQ
Trigger: CTGAGCTGGACCAGCTGCTCAGTGGATTTGGCCTGG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGGGGCTCAGGTGGACTaGACGGAGGGTAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSGAQVD*TEGSVA
Trigger: CGCCACGCTACCCTCCGTTCAGTCCACCTGAGCCCC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTGTTCCCCAGTAGGGTaGGGGTGGACTTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHCSPVG*GWTSGC
Trigger: GCAGCCCGAAGTCCACCCTCACCCTACTGGGGAACA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGGAGGCAAAGCACCCTaGGGCTCTGACATGGACAGC +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPGGKAP*GSDMDS
Trigger: GCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTGGCGATGCGGATCCTaGTGGGGTTTTCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRWRCGS*WGFQSR
Trigger: TCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCTGCACTGGGGTGGGTaGAGAGGGCTTCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPLHWGG*RGLPQQ
Trigger: CTGTTGAGGAAGCCCTCTGCACCCACCCCAGTGCAG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTCTGAACAGCCACTCTaGTGCTGGCTCCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSEQPL*CWLHGW
Trigger: CCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTCAGA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGGTGGACTTCGGGCTaGTCTCTACCCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGWTSG*SLPTGV
Trigger: AACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACCC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAGGGGATGCTCATGGTaGTGCCACTGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQRGCSW*CHCGGW
Trigger: CCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGATGGCACTGGCAGGTTaGTCGGGGTCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRMALAG*SGSCSA
Trigger: TGCAGAGCATGACCCCGAGCAACCTGCCAGTGCCAT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGATGTGGGGTGGGGGCTaGGCAAGGCCAGTATTGTCC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVMWGGG*ARPVLS
Trigger: GGACAATACTGGCCTTGCCCAGCCCCCACCCCACAT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGAGTAACTGGGATGTaGGGTGGGGGCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGVTGM*GGGWAR
Trigger: CCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGACGGTTGGGAGTAACTaGGATGTGGGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVTVGSN*DVGWGL
Trigger: CAGCCCCCACCCCACATCCCAGTTACTCCCAACCGT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCCTGAGGCTCTGACATaGACAGCTCATGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLPEALT*TAHGCG
Trigger: TCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGGCAGGCTCACGTTCTaGTTCTGCAGGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPGRLTF*FCRPGL
Trigger: CAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGCAGGCTCACGTTCTaGTTCTGCAGGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGRLTF*FCRPGL
Trigger: CAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCTCGGCTGCAGAGTTaGCTGCTGTCTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPARLQS*LLSGES
Trigger: ACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGGAGCCTGGTCCAGGTaGACTTGCACAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPGAWSR*TCTEQG
Trigger: TCCCTGCTCTGTGCAAGTCCACCTGGACCAGGCTCC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGGACTCTCAGGAGCCTaGTCCAGGTGGACTTGCACA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRGLSGA*SRWTCT
Trigger: TGTGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACACTGCAGGCGGAAAATaGCATCACGGGTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHTAGGK*HHGWPS
Trigger: GCTCGGCCACCCGTGATGTCATTTTCCGCCTGCAGT...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGACCTGAGTCGCTGCTaGCTGACAGGGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHDLSRC*LTGCGL
Trigger: GAGACCACACCCTGTCAGTCAGCAGCGACTCAGGTC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCGGAGGCAGTAGAATaGCCTGAGTCGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPAEAVE*PESLLT
Trigger: AGTCAGCAGCGACTCAGGTCATTCTACTGCCTCCGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCGGAGGCAGTAGAATaGCCTGAGTCGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVAEAVE*PESLLT
Trigger: AGTCAGCAGCGACTCAGGTCATTCTACTGCCTCCGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACAGCTCAGCCTTCTCCTaGGGGCTCAGGCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHSSAFS*GLRPLR
Trigger: ACGAAGAGGCCTGAGCCCTCAGGAGAAGGCTGAGCT...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCCTGGCCTCCCCATCTaGGGCAAAGCTGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHPGLPI*GKAVLV
Trigger: CACCAGTACAGCTTTGCCTCAGATGGGGAGGCCAGG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGTCAGGACACACAGCTaGGATGCCAAGGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRVRTHS*DAKGIQ
Trigger: CTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGAC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATCCAACGGGGCTCTCTaGCATCCCCACAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQSNGAL*HPHSVA
Trigger: AGCCACACTGTGGGGATGTCAGAGAGCCCCGTTGGA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCCCCTCGGAAGGAGTaGCTGTCCCTCACGATGAAT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPAPRKE*LSLTMN
Trigger: ATTCATCGTGAGGGACAGTCACTCCTTCCGAGGGGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCTCCAGCTTTCTTGTTaGGGTGCAGGACAGACGGAG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLQLSC*GAGQTE
Trigger: CTCCGTCTGTCCTGCACCTCAACAAGAAAGCTGGAG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCTGCCTGGTGACCAGTaGGGGACTCCATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPLPGDQ*GTPFPQ
Trigger: CTGTGGAAATGGAGTCCCTCACTGGTCACCAGGCAG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCAGAACCACGGTCCTTaGAGGCTTGTCACAGCGGAG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVQNHGP*RLVTAE
Trigger: CTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGCAGGGAAGGACACTaGGATGATACGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGREGH*DDTLGD
Trigger: GTCACCGAGCGTATCATCGCAGTGTCCTTCCCTGCC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTGGCGATGCGGATCCTaGTGGGGTTTTCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPWRCGS*WGFQSR
Trigger: TCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACCTTGGCATACAGGCTaGCATCCACTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQPWHTG*HPLAPV
Trigger: CACAGGGGCCAGTGGATGGCAGCCTGTATGCCAAGG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCTGCACTGGGGTGGGTaGAGAGGGCTTCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHLHWGG*RGLPQQ
Trigger: CTGTTGAGGAAGCCCTCTGCACCCACCCCAGTGCAG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGAACAGCCACTCTGCTaGTGGCTCCACGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQEQPLC*WLHGWE
Trigger: CTCCCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTCTGAACAGCCACTCTaGTGCTGGCTCCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPSEQPL*CWLHGW
Trigger: CCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTCAGA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGGTGGACTTCGGGCTaGTCTCTACCCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGWTSG*SLPTGV
Trigger: AACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGGCTGCAGAGTTGGCTaGTGTCTGGGGAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRGCRVG*CLGRVF
Trigger: GAAAACTCTCCCCAGACAGCAGCCAACTCTGCAGCC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCTCGGGGTCATGCTCTaGAAACAGGTGGCATACGTT +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLLGVML*KQVAYV
Trigger: AACGTATGCCACCTGTTTGCAGAGCATGACCCCGAG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGCTGGGCCGGCTCAATaGCGATGCGGATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSAGPAQ*RCGSCW
Trigger: CCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTTTGTGCAAACTGGCTaGGCTGCTCAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPFVQTG*AAQLGL
Trigger: GAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGAAGCATGGTGGGTTTaGGTCCAACGGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPEAWWV*VQRGSL
Trigger: CAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGGCTCTCTCTCCTCTaGCCAGGGCCATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGLSLL*PGPLLE
Trigger: TTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACTGCTCTCTACCCACTaGCGTTCTGCAGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQLLSTH*RSAEGG
Trigger: CCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATGGAGCTCTGAGGACTaGAAGCAGGGCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQWSSED*KQGSPG
Trigger: ACCAGGGCTGCCCTGCTTCCAGTCCTCAGAGCTCCA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCTGTGGAAAGAGGCCTaGAGCTCTGAGGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLWKEA*SSEDWK
Trigger: CTTCCAGTCCTCAGAGCTCCAGGCCTCTTTCCACAG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGACAGCTCATGGCTGTaGAAAGAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDSSWL*KEAWSS
Trigger: AGAGCTCCAGGCCTCTTTCCACAGCCATGAGCTGTC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGACATGGACAGCTCATaGCTGTGGAAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDMDSS*LWKEAW
Trigger: CCAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTAGGCCTGGACTGTGGTaGCTGCTGGCTCCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSRPGLW*LLAPGD
Trigger: GTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGCTCGGCTGCAGAGTTaGCTGCTGTCTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHARLQS*LLSGES
Trigger: ACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCTGTCCTCCATGGCTaGACTCAGAACCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPAVLHG*TQNHGP
Trigger: AGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACGTGGCTGTCCTCCATaGCTGGACTCAGAACCACGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQRGCPP*LDSEPR
Trigger: CCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTGGCTGAGACGTTGGTaGAGTGCATGTAGGACGATA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLWLRRW*SACRTI
Trigger: TATCGTCCTACATGCACTTCACCAACGTCTCAGCCA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAGATGCTCCGATCCTTaGATCTTCTCAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRRCSDP*IFSGVA
Trigger: GGCCACACCTGAGAAGATTCAAGGATCGGAGCATCT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGATTTGGCCCATTGCTaGTGCCTCTCTGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDLAHC*CLSEQP
Trigger: TGGCTGTTCAGAGAGGCATCAGCAATGGGCCAAATC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACAGCACCCTGAGGCTCTaGCATGGACAGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHSTLRL*HGQLMA
Trigger: AGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCT...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGCCCCTCGGAAGGAGTaGCTGTCCCTCACGATGAAT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQAPRKE*LSLTMN
Trigger: ATTCATCGTGAGGGACAGTCACTCCTTCCGAGGGGC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTTCTGGACTGCCTGGTaGCCAGTGAGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVFWTAW*PVRDSI
Trigger: AATGGAGTCCCTCACTGGTCACCAGGCAGTCCAGAA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGACTGGAGGAGGTTCTTaGACCAAGGTCATACTCAGG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLTGGGS*TKVILR
Trigger: CCTGAGTATGACCTTGGTTCAAGAACCTCCTCCAGT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTGGGCTGGTACCACATaGCGTGTCCCACTGTACTTG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVWAGTT*RVPLYL
Trigger: CAAGTACAGTGGGACACGGCATGTGGTACCAGCCCA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTGGGCTGGTACCACATaGCGTGTCCCACTGTACTTG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPWAGTT*RVPLYL
Trigger: CAAGTACAGTGGGACACGGCATGTGGTACCAGCCCA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCCACTGTGCTGCGGCTaGCAAGCCTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTPLCCG*QAWPPH
Trigger: ATGGGGAGGCCAGGCTTGGCAGCCGCAGCACAGTGG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCATTCGGGAAGGGGATaGTCATGGTGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVHSGRG*SWCCHC
Trigger: ACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCCAAACATTGCAGGCTaGTCCCTGCTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPPNIAG*SLLQQL
Trigger: GAGCTGCTGAAGCAGGGAGCAGCCTGCAATGTTTGG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTGGTCCAGGTGGACTTaGACAGAGCAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHWSRWT*TEQGVT
Trigger: GGTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCATGACGACCACATGCTaGGGGTCGTTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPMTTTC*GSLFSQ
Trigger: CTGGCTGAACAACGACCCCCAGCATGTGGTCGTCAT...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTTACCACCCCTGCAGTaGATGACGACCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVLPPLQ*MTTTCW
Trigger: CCAGCATGTGGTCGTCATCCACTGCAGGGGTGGTAA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAACCTGTCCAGTGCCTaGTCAGCACTGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQNLSSA*SALAET
Trigger: CGTCTCAGCCAGTGCTGACCAGGCACTGGACAGGTT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAGGGTGTGGTCTCCGTaGTCTGGACTGCTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQRVWSP*SGLLVA
Trigger: AGCCACTAGCAGTCCAGACCACGGAGACCACACCCT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTAAGGACCCAGGTGGGTaGACTGGGGCCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSKDPGG*TGALQR
Trigger: CCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGGGCATTCAGGTGTGTaGGGATGGGCTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHGHSGV*GWAQRW
Trigger: CCACCTTTGAGCCCATCCCCACACACCTGAATGCCC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGAAGCCGTCCCCCAATaGGGTCATCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSEAVPQ*GHHLAG
Trigger: GCCGGCAAGGTGATGACCCCATTGGGGGACGGCTTC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGAAGCATGGTGGGTTTaGGTCCAACGGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHEAWWV*VQRGSL
Trigger: CAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGGCTCTCTCTCCTCTaGCCAGGGCCATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGLSLL*PGPLLE
Trigger: TTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGACAGCTCATGGCTGTaGAAAGAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDSSWL*KEAWSS
Trigger: AGAGCTCCAGGCCTCTTTCCACAGCCATGAGCTGTC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGACATGGACAGCTCATaGCTGTGGAAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPDMDSS*LWKEAW
Trigger: CCAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGCTGGTGATGTTCCATaGGAATTGACCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLAGDVP*ELTSKV
Trigger: CACCTTGCTGGTCAATTCCCATGGAACATCACCAGC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGACCGTGAGAAAGTTGTaGGGCAGAAAGCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLTVRKL*GRKPLS
Trigger: TGACAACGGCTTTCTGCCCCACAACTTTCTCACGGT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTAGGCCTGGACTGTGGTaGCTGCTGGCTCCGGGTGAC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTRPGLW*LLAPGD
Trigger: GTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCT...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGTGTGGCCACCTTCATaGCCAGGCCGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTVWPPS*PGRRPL
Trigger: GAGGGGCCTACGGCCTGGCCATGAAGGTGGCCACAC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCAACCGCACTCCCTTTaGGGTACACTCAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLQPHSL*GTLNQE
Trigger: TTCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGGACTCTCAGGAGCCTaGTCCAGGTGGACTTGCACA +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHGLSGA*SRWTCT
Trigger: TGTGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGTAAGGTCCAGTTCGTaGCTGTCCTCCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVVRSSS*LSSMAG
Trigger: TCCAGCCATGGAGGACAGCCACGAACTGGACCTTAC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCAAGTAGGACTCCTCTaGACAACTGGCAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPQVGLL*TTGREG
Trigger: TCCTTCCCTGCCAGTTGTTCAGAGGAGTCCTACTTG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATTCAGGAGAGGAAAATaGTCCCAGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQFRRGK*SQAWGW
Trigger: CCAGCCCCAAGCCTGGGATCATTTTCCTCTCCTGAA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCTCCAGCTTTCTTGTTaGGGTGCAGGACAGACGGAG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHLQLSC*GAGQTE
Trigger: CTCCGTCTGTCCTGCACCTCAACAAGAAAGCTGGAG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCTCCGGTGTGGAACTaGAGGCGGAAAATGACATCA +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVAPVWN*RRKMTS
Trigger: TGATGTCATTTTCCGCCTGCAGTTCCACACCGGAGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGACACACAGCTGAGATaGCAAGGGCATTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDTQLR*QGHSGV
Trigger: CACACCTGAATGCCCTTGGCATCTCAGCTGTGTGTC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCATTCGGGAAGGGGATaGTCATGGTGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHHSGRG*SWCCHC
Trigger: ACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGAAGGGCGTAATGGAATaGTGGCACACCAAAGCCGTC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVKGVME*WHTKAV
Trigger: GACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCTGGGGAGAGTTTTCTaGTATTTCCTCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLLGRVF*YFLQWI
Trigger: GATCCACTGGAGGAAATAGCAGAAAACTCTCCCCAG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGCTGCAGAGTTGGCTaGTGTCTGGGGAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGCRVG*CLGRVF
Trigger: GAAAACTCTCCCCAGACAGCAGCCAACTCTGCAGCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACCAAACATTGCAGGCTaGTCCCTGCTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQPNIAG*SLLQQL
Trigger: GAGCTGCTGAAGCAGGGAGCAGCCTGCAATGTTTGG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCAGGGCCTTCTGGACTaGCTGGTGACCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSQGLLD*LVTSEG
Trigger: TCCCTCACTGGTCACCAGGCAGTCCAGAAGGCCCTG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGGTTGCTCGGGGTCATaGTCTGCAAACAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHGCSGS*SANRWH
Trigger: ATGCCACCTGTTTGCAGAGCATGACCCCGAGCAACC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCACTCCTCTGAACAACTaGCAGGGAAGGACACTGCGA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPTPLNN*QGRTLR
Trigger: TCGCAGTGTCCTTCCCTGCCAGTTGTTCAGAGGAGT...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGACTCCTCTGAACAACTaGCAGGGAAGGACACTGCGA +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVTPLNN*QGRTLR
Trigger: TCGCAGTGTCCTTCCCTGCCAGTTGTTCAGAGGAGT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATTACCACCCCTGCAGTaGATGACGACCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQLPPLQ*MTTTCW
Trigger: CCAGCATGTGGTCGTCATCCACTGCAGGGGTGGTAA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTTACCACCCCTGCAGTaGATGACGACCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHLPPLQ*MTTTCW
Trigger: CCAGCATGTGGTCGTCATCCACTGCAGGGGTGGTAA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCATCTCCATTCACATaGACCTGGGCTGGTACCACA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPASPFT*TWAGTT
Trigger: TGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCATCTCCATTCACATaGACCTGGGCTGGTACCACA +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVASPFT*TWAGTT
Trigger: TGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCCCATAGGCCTGCACTaGGGTGGGTGCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTPIGLH*GGCRGL
Trigger: AAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGGAGTAACTGGGATGTaGGGTGGGGGCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTGVTGM*GGGWAR
Trigger: CCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGCTGGGCTGCTCAGCTaGGGCTCAGGTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTAGLLS*GSGGLN
Trigger: GTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGTGCTCTGCAAACAGGTaGCATACGTTGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLCSANR*HTLSVA
Trigger: TGCTACAGACAACGTATGCCACCTGTTTGCAGAGCA...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCAAGTAGGACTCCTCTaGACAACTGGCAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHQVGLL*TTGREG
Trigger: TCCTTCCCTGCCAGTTGTTCAGAGGAGTCCTACTTG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCACCCCTGCAGTGGATaGCGACCACATGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGHPCSG*RPHAGG
Trigger: ACCCCCAGCATGTGGTCGTCATCCACTGCAGGGGTG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGATAGCATTTCACCATaGTGTCACCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDSISP*CHPSAA
Trigger: AGCTGCTGAAGGGTGACATCATGGTGAAATGCTATC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGCCACCATCTGCTGCTaGCGTACCCAAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTATICC*RTQVWV
Trigger: CACCCAGACTTGGGTACGTCAGCAGCAGATGGTGGC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGATTTGGCCCATTGCTaGTGCCTCTCTGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHDLAHC*CLSEQP
Trigger: TGGCTGTTCAGAGAGGCATCAGCAATGGGCCAAATC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGTGACTCTGTCATCTTaGAATCTGGGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPVTLSS*NLGWRA
Trigger: AGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCAC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGATGGACTCCATTCGTaGCTCTGTCATCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLDGLHS*LCHLEI
Trigger: GATTTCAAGATGACAGAGTCACGAATGGAGTCCATC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCCAGGATCAGCCTGTTaGGTTGCTCAATGGACTGAT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPPGSAC*VAQWTD
Trigger: ATCAGTCCATTGAGCAACTCAACAGGCTGATCCTGG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCTGTTCCCCAGTAGGGTaGGGGTGGACTTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGCSPVG*GWTSGC
Trigger: GCAGCCCGAAGTCCACCCTCACCCTACTGGGGAACA...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCTGTGGTTACTGTGTTaGAACCTAAGAAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLLWLLC*NLRRFG
Trigger: GCCAAACCTTCTTAGGTTTCAACACAGTAACCACAG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCTGCCTGGTGACCAGTaGGGGACTCCATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSLPGDQ*GTPFPQ
Trigger: CTGTGGAAATGGAGTCCCTCACTGGTCACCAGGCAG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGACTGGAGGAGGTTCTTaGACCAAGGTCATACTCAGG +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVTGGGS*TKVILR
Trigger: CCTGAGTATGACCTTGGTTCAAGAACCTCCTCCAGT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAAGAAGGGCCATCTTTaGTCCACTTCCTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRKKGHL*STSCLV
Trigger: CACAAGACAGGAAGTGGATCAAAGATGGCCCTTCTT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGTCTTTGTGGGAGCTTaGAGAGTCTTCCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPVFVGA*RVFQAK
Trigger: TTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGAC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTGCACTGGGGTGGGTaGAGAGGGCTTCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLHWGG*RGLPQQ
Trigger: CTGTTGAGGAAGCCCTCTGCACCCACCCCAGTGCAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACCACTGTGCTGCGGCTaGCAAGCCTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIPLCCG*QAWPPH
Trigger: ATGGGGAGGCCAGGCTTGGCAGCCGCAGCACAGTGG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCTTCAGCAGCTCGGCTaGAGAGTTGGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSLQQLG*RVGCCL
Trigger: CAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGAATCTTCTCAGGTGTaGCCGAGAAGACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRESSQV*PRRPTQ
Trigger: TTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCTGCGGCTGCCAAGCCTaGCCTCCCCATCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGCGCQA*PPHLRQ
Trigger: TTGCCTCAGATGGGGAGGCCAGGCTTGGCAGCCGCA...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTATGTGGGGTGGGGGCTaGGCAAGGCCAGTATTGTCC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTMWGGG*ARPVLS
Trigger: GGACAATACTGGCCTTGCCCAGCCCCCACCCCACAT...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGAAGCCGTCCCCCAATaGGGTCATCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGEAVPQ*GHHLAG
Trigger: GCCGGCAAGGTGATGACCCCATTGGGGGACGGCTTC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTTAGAGAAGGTCACCTaGCTCGCAGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLEKVT*LAASLS
Trigger: TGACAATGATGCTGCGAGCCAGGTGACCTTCTCTAA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGCTGGGCTGCTCAGCTaGGGCTCAGGTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGAGLLS*GSGGLN
Trigger: GTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGAAGCATGGTGGGTTTaGGTCCAACGGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSEAWWV*VQRGSL
Trigger: CAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTGCTCTCTACCCACTaGCGTTCTGCAGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLLSTH*RSAEGG
Trigger: CCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCTGGTGATGTTCCATaGGAATTGACCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPAGDVP*ELTSKV
Trigger: CACCTTGCTGGTCAATTCCCATGGAACATCACCAGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTGCCACTGTGGGGGCTaGAGAAGCCACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSCHCGG*RSHWMM
Trigger: CATCATCCAGTGGCTTCTCCAGCCCCCACAGTGGCA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCAACCGCACTCCCTTTaGGGTACACTCAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPQPHSL*GTLNQE
Trigger: TTCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTGCTCTGCAAACAGGTaGCATACGTTGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRCSANR*HTLSVA
Trigger: TGCTACAGACAACGTATGCCACCTGTTTGCAGAGCA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCGTGGCTGTCCTCCATaGCTGGACTCAGAACCACGG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTRGCPP*LDSEPR
Trigger: CCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp ACACAGATGCTAATGAGCCAGGGACTGGGGACAGCCTaGTCTTCCATGCTCCCTCCTTGTACAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TQMLMSQGLGTA*SSMLPPCTALV
Trigger: GACAAGGGCTGTACAAGGAGGGAGCATGGAAGACAAGGCTGTCCCCAGTCCCTGGCTCATTAGCATCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTTCAGCCAGGACTCCTaGGCCTTACATATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHFSQDS*ALHIVH
Trigger: GTGCACTATATGTAAGGCTCAGGAGTCCTGGCTGAA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGATAGCATTTCACCATaGTGTCACCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDSISP*CHPSAA
Trigger: AGCTGCTGAAGGGTGACATCATGGTGAAATGCTATC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGATGGACTCCATTCGTaGCTCTGTCATCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDGLHS*LCHLEI
Trigger: GATTTCAAGATGACAGAGTCACGAATGGAGTCCATC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACCAGGATCAGCCTGTTaGGTTGCTCAATGGACTGAT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQPGSAC*VAQWTD
Trigger: ATCAGTCCATTGAGCAACTCAACAGGCTGATCCTGG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAAGAAGAGCTTTCTCTaGTTGTCAGTCAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRKKSFL*LSVRVM
Trigger: CATCACCCTGACTGACAATCAGAGAAAGCTCTTCTT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTGGATGACGACCACATaGTGGGGGTCGTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSWMTTT*WGSLFS
Trigger: GCTGAACAACGACCCCCAGCATGTGGTCGTCATCCA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCTTCAGCAACACCATTaGCAAAGCCATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPLQQHH*QSHQTG
Trigger: TCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTACAGAACTCATGAGTaGCGAGGGGACTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPYRTHE*RGDFQK
Trigger: CTTCTGAAAGTCCCCTCGGCACTCATGAGTTCTGTA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAGGGGATGCTCATGGTaGTGCCACTGTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIRGCSW*CHCGGW
Trigger: CCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCCACTTCTGAAGGCTTaGAGAAGTCTGGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVPLLKA*RSLEGH
Trigger: ATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCTGGGGAGAGTTTTCTaGTATTTCCTCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVLGRVF*YFLQWI
Trigger: GATCCACTGGAGGAAATAGCAGAAAACTCTCCCCAG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTATGACGACCACATGCTaGGGGTCGTTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSMTTTC*GSLFSQ
Trigger: CTGGCTGAACAACGACCCCCAGCATGTGGTCGTCAT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCGATGCGGATCCTGCTaGGGTTTTCAGAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSRCGSC*GFQSRH
Trigger: ATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAAGGACCCAGGTGGGTaGACTGGGGCCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIKDPGG*TGALQR
Trigger: CCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAACCAAGGCCCAGGTCTaGAGAAAGGACACCATTATG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQTKAQV*RKDTIM
Trigger: CATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCATGTGGGGTGGGGGCTaGGCAAGGCCAGTATTGTCC +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGMWGGG*ARPVLS
Trigger: GGACAATACTGGCCTTGCCCAGCCCCCACCCCACAT...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGGATGGGCTCAAAGGTaGGGTCCAGCTCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTGWAQR*GPAPGS
Trigger: TGATCCTGGAGCTGGACCCCACCTTTGAGCCCATCC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCACACCTGCTGAAAGTTaGGTGTTGCAGGCATATCAG +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPTPAES*VLQAYQ
Trigger: CTGATATGCCTGCAACACCCAACTTTCAGCAGGTGT...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCTGCTCTCTACCCACTaGCGTTCTGCAGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGLLSTH*RSAEGG
Trigger: CCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACTGGTTCTGCAGGCCTaGACTGTGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYILVLQA*TVVAAG
Trigger: GCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGCTTTGTCCTTCAGCATaGCAATGGCTTGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRLCPSA*QWLVLL
Trigger: CAAGAGAACAAGCCATTGCCATGCTGAAGGACAAAG...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGCTCGGCTGCAGAGTTaGCTGCTGTCTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGARLQS*LLSGES
Trigger: ACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGATAGCATTTCACCATaGTGTCACCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHDSISP*CHPSAA
Trigger: AGCTGCTGAAGGGTGACATCATGGTGAAATGCTATC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTTGCTGATGCCTCTCTaGACAGCCACTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLLMPL*TATLLL
Trigger: CAGCAGCAGAGTGGCTGTTCAGAGAGGCATCAGCAA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGATGGACTCCATTCGTaGCTCTGTCATCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPDGLHS*LCHLEI
Trigger: GATTTCAAGATGACAGAGTCACGAATGGAGTCCATC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGGAGGCAAAGCACCCTaGGGCTCTGACATGGACAGC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIGGKAP*GSDMDS
Trigger: GCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCCGGCTCAATGGCGATaGGGATCCTGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGPAQWR*GSCWGF
Trigger: AAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACCTTGGCATACAGGCTaGCATCCACTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIPWHTG*HPLAPV
Trigger: CACAGGGGCCAGTGGATGGCAGCCTGTATGCCAAGG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTCCCACTGTACTTGCTaGGCATATCAGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVSHCTC*AYQSCL
Trigger: AAGACATGACTGATATGCGCAGCAAGTACAGTGGGA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCTTCAGCAACACCATTaGCAAAGCCATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHLQQHH*QSHQTG
Trigger: TCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTACAGAACTCATGAGTaGCGAGGGGACTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHYRTHE*RGDFQK
Trigger: CTTCTGAAAGTCCCCTCGGCACTCATGAGTTCTGTA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCTCACGTTCTGGTTCTaGAGGCCTGGACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGLTFWF*RPGLWW
Trigger: CCACCACAGTCCAGGCCTGCAGAACCAGAACGTGAG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCCAAACATTGCAGGCTaGTCCCTGCTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTPNIAG*SLLQQL
Trigger: GAGCTGCTGAAGCAGGGAGCAGCCTGCAATGTTTGG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTACTCCTCTGAACAACTaGCAGGGAAGGACACTGCGA +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSTPLNN*QGRTLR
Trigger: TCGCAGTGTCCTTCCCTGCCAGTTGTTCAGAGGAGT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCGATGCGGATCCTGCTaGGGTTTTCAGAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTRCGSC*GFQSRH
Trigger: ATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGAATCTTCTCAGGTGTaGCCGAGAAGACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQESSQV*PRRPTQ
Trigger: TTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACAGAGTAGGAGAGCCTaGGGAGGAGCCAGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIQSRRA*GGASVR
Trigger: CCGAACACTGGCTCCTCCCCAGGCTCTCCTACTCTG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAACACCTGCTGAAAGTTaGGTGTTGCAGGCATATCAG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQTPAES*VLQAYQ
Trigger: CTGATATGCCTGCAACACCCAACTTTCAGCAGGTGT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATGGAGCTCTGAGGACTaGAAGCAGGGCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIWSSED*KQGSPG
Trigger: ACCAGGGCTGCCCTGCTTCCAGTCCTCAGAGCTCCA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTGTGGAAAGAGGCCTaGAGCTCTGAGGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLWKEA*SSEDWK
Trigger: CTTCCAGTCCTCAGAGCTCCAGGCCTCTTTCCACAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGACAGCTCATGGCTGTaGAAAGAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTDSSWL*KEAWSS
Trigger: AGAGCTCCAGGCCTCTTTCCACAGCCATGAGCTGTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGACATGGACAGCTCATaGCTGTGGAAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTDMDSS*LWKEAW
Trigger: CCAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCCTGAGGCTCTGACATaGACAGCTCATGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTPEALT*TAHGCG
Trigger: TCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATGCAGGCCTGGACTGTaGTGGCTGCTGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLCRPGL*WLLAPG
Trigger: ACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCTGCCACTGTGGGGGCTaGAGAAGCCACTGGATGATG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGCHCGG*RSHWMM
Trigger: CATCATCCAGTGGCTTCTCCAGCCCCCACAGTGGCA...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCCTTCAGCATGGCAATaGCTTGTTCTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPPSAWQ*LVLLRC
Trigger: ACATCTCAAGAGAACAAGCCATTGCCATGCTGAAGG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGCCGGACAAGTTCATTaGACAAATCTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVAGQVH*TNLQLS
Trigger: AGAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGAGTTGGCTGCTGTCTaGGGAGAGTTTTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQELAAV*GEFSAI
Trigger: AATAGCAGAAAACTCTCCCCAGACAGCAGCCAACTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTCCCTTGACCGTCAATaGTCTGTCTGCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSSLDRQ*SVCTLH
Trigger: GTGGAGTGTGCAGACAGACCATTGACGGTCAAGGGA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGTCAGGACACACAGCTaGGATGCCAAGGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGVRTHS*DAKGIQ
Trigger: CTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGAC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCTTCAGGAGAGGAAAATaGTCCCAGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGFRRGK*SQAWGW
Trigger: CCAGCCCCAAGCCTGGGATCATTTTCCTCTCCTGAA...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCTGTGGTTACTGTGTTaGAACCTAAGAAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHLWLLC*NLRRFG
Trigger: GCCAAACCTTCTTAGGTTTCAACACAGTAACCACAG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGAACTTCGAAGTGTCTTaGACAAATTTCACAATCACG +
Preference number: 4 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLNFEVS*TNFTIT
Trigger: CGTGATTGTGAAATTTGTTCAAGACACTTCGAAGTT...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACAAGAAGAGCTTTCTCTaGTTGTCAGTCAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHKKSFL*LSVRVM
Trigger: CATCACCCTGACTGACAATCAGAGAAAGCTCTTCTT...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGCCAATCATGACCTTTaGCACAAAGTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHANHDL*HKVDNG
Trigger: GCCATTGTCAACTTTGTGTCAAAGGTCATGATTGGC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGGCAGGGAAGGACACTaGGATGATACGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIGREGH*DDTLGD
Trigger: GTCACCGAGCGTATCATCGCAGTGTCCTTCCCTGCC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGTCTTTGTGGGAGCTTaGAGAGTCTTCCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSVFVGA*RVFQAK
Trigger: TTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGAC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTCCCACTGTACTTGCTaGGCATATCAGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHSHCTC*AYQSCL
Trigger: AAGACATGACTGATATGCGCAGCAAGTACAGTGGGA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCATTCGGGAAGGGGATaGTCATGGTGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGHSGRG*SWCCHC
Trigger: ACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTAAGGGCGTAATGGAATaGTGGCACACCAAAGCCGTC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTKGVME*WHTKAV
Trigger: GACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTT...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAGGGTGTGGTCTCCGTaGTCTGGACTGCTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIRVWSP*SGLLVA
Trigger: AGCCACTAGCAGTCCAGACCACGGAGACCACACCCT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTGTCATCTTGAAATCTaGGCTGGAGAGCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHCHLEI*AGELYQ
Trigger: CTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATCCCAGGCTTGGGGCTaGGTCCACTCCAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLSQAWG*VHSSLS
Trigger: GGAAAGGCTGGAGTGGACCCAGCCCCAAGCCTGGGA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACGATGTTTTCACATATaGTGTTTCCGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQRCFHI*CFRRHR
Trigger: CCTGTGTCTCCGGAAACACCATATGTGAAAACATCG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATTTGTGCAAACTGGCTaGGCTGCTCAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIFVQTG*AAQLGL
Trigger: GAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGACCTTTGTGCAAACTaGCTGGGCTGCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIDLCAN*LGCSAG
Trigger: CCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTACCGTGAGAAAGTTGTaGGGCAGAAAGCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSTVRKL*GRKPLS
Trigger: TGACAACGGCTTTCTGCCCCACAACTTTCTCACGGT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACTGGTTCTGCAGGCCTaGACTGTGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLLVLQA*TVVAAG
Trigger: GCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGGCTGGAGAAGCCACTaGATGATGGGGAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIGWRSH*MMGRLS
Trigger: GCTCAGTCTCCCCATCATCCAGTGGCTTCTCCAGCC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACCTTCAGCATGGCAATaGCTTGTTCTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQPSAWQ*LVLLRC
Trigger: ACATCTCAAGAGAACAAGCCATTGCCATGCTGAAGG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACTTTGTCCTTCAGCATaGCAATGGCTTGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQLCPSA*QWLVLL
Trigger: CAAGAGAACAAGCCATTGCCATGCTGAAGGACAAAG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTTCAGCCAGGACTCCTaGGCCTTACATATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTFSQDS*ALHIVH
Trigger: GTGCACTATATGTAAGGCTCAGGAGTCCTGGCTGAA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGCCACCATCTGCTGCTaGCGTACCCAAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLATICC*RTQVWV
Trigger: CACCCAGACTTGGGTACGTCAGCAGCAGATGGTGGC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATTGCTGATGCCTCTCTaGACAGCCACTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYILLMPL*TATLLL
Trigger: CAGCAGCAGAGTGGCTGTTCAGAGAGGCATCAGCAA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCCAGGATCAGCCTGTTaGGTTGCTCAATGGACTGAT +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTPGSAC*VAQWTD
Trigger: ATCAGTCCATTGAGCAACTCAACAGGCTGATCCTGG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATTCTGGACTGCCTGGTaGCCAGTGAGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIFWTAW*PVRDSI
Trigger: AATGGAGTCCCTCACTGGTCACCAGGCAGTCCAGAA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACCTTGGCATACAGGCTaGCATCCACTGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLPWHTG*HPLAPV
Trigger: CACAGGGGCCAGTGGATGGCAGCCTGTATGCCAAGG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATGCACAGCTCCGGTGTaGAACTGCAGGCGGAAAATG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYICTAPV*NCRRKM
Trigger: CATTTTCCGCCTGCAGTTCCACACCGGAGCTGTGCA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACAGAGTAGGAGAGCCTaGGGAGGAGCCAGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLQSRRA*GGASVR
Trigger: CCGAACACTGGCTCCTCCCCAGGCTCTCCTACTCTG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACTGTGGAAAGAGGCCTaGAGCTCTGAGGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYILWKEA*SSEDWK
Trigger: CTTCCAGTCCTCAGAGCTCCAGGCCTCTTTCCACAG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGGAGCCTGGTCCAGGTaGACTTGCACAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLGAWSR*TCTEQG
Trigger: TCCCTGCTCTGTGCAAGTCCACCTGGACCAGGCTCC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGTAAGGTCCAGTTCGTaGCTGTCCTCCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIVRSSS*LSSMAG
Trigger: TCCAGCCATGGAGGACAGCCACGAACTGGACCTTAC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGACCTGAGTCGCTGCTaGCTGACAGGGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHDLSRC*LTGCGL
Trigger: GAGACCACACCCTGTCAGTCAGCAGCGACTCAGGTC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGCCACCATCTGCTGCTaGCGTACCCAAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHATICC*RTQVWV
Trigger: CACCCAGACTTGGGTACGTCAGCAGCAGATGGTGGC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACCGGCTCAATGGCGATaGGGATCCTGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLPAQWR*GSCWGF
Trigger: AAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATCTGAACAGCCACTCTaGTGCTGGCTCCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLSEQPL*CWLHGW
Trigger: CCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTCAGA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGGGTGGACTTCGGGCTaGTCTCTACCCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHGWTSG*SLPTGV
Trigger: AACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACCC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTGGGGAGAGTTTTCTaGTATTTCCTCCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLGRVF*YFLQWI
Trigger: GATCCACTGGAGGAAATAGCAGAAAACTCTCCCCAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACTTCAGCAGCTCGGCTaGAGAGTTGGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLLQQLG*RVGCCL
Trigger: CAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTTAAGTACCAAACATTaGAGGCTGCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSLSTKH*RLLPAS
Trigger: TGAAGCAGGGAGCAGCCTGCAATGTTTGGTACTTAA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCAGGGCCTTCTGGACTaGCTGGTGACCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHQGLLD*LVTSEG
Trigger: TCCCTCACTGGTCACCAGGCAGTCCAGAAGGCCCTG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACTCGGGGTCATGCTCTaGAAACAGGTGGCATACGTT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYILGVML*KQVAYV
Trigger: AACGTATGCCACCTGTTTGCAGAGCATGACCCCGAG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAATGGCACTGGCAGGTTaGTCGGGGTCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLMALAG*SGSCSA
Trigger: TGCAGAGCATGACCCCGAGCAACCTGCCAGTGCCAT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTCAGTCATGTCTTTGTaGGAGCTTGCAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTSVMSL*ELAESS
Trigger: GGAAGACTCTGCAAGCTCCCACAAAGACATGACTGA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGGATGGGCTCAAAGGTaGGGTCCAGCTCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLGWAQR*GPAPGS
Trigger: TGATCCTGGAGCTGGACCCCACCTTTGAGCCCATCC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCGATGTTTTCACATATaGTGTTTCCGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSRCFHI*CFRRHR
Trigger: CCTGTGTCTCCGGAAACACCATATGTGAAAACATCG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGCTGGTGATGTTCCATaGGAATTGACCAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGAGDVP*ELTSKV
Trigger: CACCTTGCTGGTCAATTCCCATGGAACATCACCAGC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCACCGTGAGAAAGTTGTaGGGCAGAAAGCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGTVRKL*GRKPLS
Trigger: TGACAACGGCTTTCTGCCCCACAACTTTCTCACGGT...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGGCTGGAGAAGCCACTaGATGATGGGGAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLGWRSH*MMGRLS
Trigger: GCTCAGTCTCCCCATCATCCAGTGGCTTCTCCAGCC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp TTCGTGTGGCTTCTTGGATGCATTCCATGCCAACCTTaGTGGCATTCAATTCACCGGAAAGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FVWLLGCIPCQP*WHSIHRKAGLQ
Trigger: CTGAAGCCCAGCTTTCCGGTGAATTGAATGCCACAAAGGTTGGCATGGAATGCATCCAAGAAGCCACACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGAAAGGACACCATTATaGTCTTCAGCAACACCATTG +
Preference number: 4 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSERTPL*SSATPL
Trigger: CAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGTGACTCTGTCATCTTaGAATCTGGGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIVTLSS*NLGWRA
Trigger: AGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCAC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGTCAGGACACACAGCTaGGATGCCAAGGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLVRTHS*DAKGIQ
Trigger: CTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGAC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACAGCACCCTGAGGCTCTaGCATGGACAGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHSTLRL*HGQLMA
Trigger: AGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCT...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAACTTCGAAGTGTCTTaGACAAATTTCACAATCACG +
Preference number: 4 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQNFEVS*TNFTIT
Trigger: CGTGATTGTGAAATTTGTTCAAGACACTTCGAAGTT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGCCCCTCGGAAGGAGTaGCTGTCCCTCACGATGAAT +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHAPRKE*LSLTMN
Trigger: ATTCATCGTGAGGGACAGTCACTCCTTCCGAGGGGC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATGGATGACGACCACATaGTGGGGGTCGTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLWMTTT*WGSLFS
Trigger: GCTGAACAACGACCCCCAGCATGTGGTCGTCATCCA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCTTCAGCAACACCATTaGCAAAGCCATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGLQQHH*QSHQTG
Trigger: TCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCAGTATTGTCCACTGTaGTGCGGCTGCCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHQYCPL*CGCQAW
Trigger: CCAGGCTTGGCAGCCGCAGCACAGTGGACAATACTG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACAACCTGTCCAGTGCCTaGTCAGCACTGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHNLSSA*SALAET
Trigger: CGTCTCAGCCAGTGCTGACCAGGCACTGGACAGGTT...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATGCACAGCTCCGGTGTaGAACTGCAGGCGGAAAATG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLCTAPV*NCRRKM
Trigger: CATTTTCCGCCTGCAGTTCCACACCGGAGCTGTGCA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTGTCATCTTGAAATCTaGGCTGGAGAGCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTCHLEI*AGELYQ
Trigger: CTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGGATGGGCTCAAAGGTaGGGTCCAGCTCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHGWAQR*GPAPGS
Trigger: TGATCCTGGAGCTGGACCCCACCTTTGAGCCCATCC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACTTTGTGCAAACTGGCTaGGCTGCTCAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHFVQTG*AAQLGL
Trigger: GAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAA...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGACCTTTGTGCAAACTaGCTGGGCTGCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHDLCAN*LGCSAG
Trigger: CCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGACATCCCCACAGTGTaGCTAATAATCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIDIPTV*LIISGQ
Trigger: CTGCCCAGAGATTATTAGCCACACTGTGGGGATGTC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGGGCTCTCTCTCCTCTaGCCAGGGCCATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHGLSLL*PGPLLE
Trigger: TTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTTTGTCCTTCAGCATaGCAATGGCTTGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSRGMPILARTITPDSVTLCPSA*QWLVLL
Trigger: CAAGAGAACAAGCCATTGCCATGCTGAAGGACAAAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAAGATGCTCCGATCCTTaGATCTTCTCAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLRCSDP*IFSGVA
Trigger: GGCCACACCTGAGAAGATTCAAGGATCGGAGCATCT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGATTTGGCCCATTGCTaGTGCCTCTCTGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLDLAHC*CLSEQP
Trigger: TGGCTGTTCAGAGAGGCATCAGCAATGGGCCAAATC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCTCCAGCTTTCTTGTTaGGGTGCAGGACAGACGGAG +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHLQLSC*GAGQTE
Trigger: CTCCGTCTGTCCTGCACCTCAACAAGAAAGCTGGAG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAAGAAGGGCCATCTTTaGTCCACTTCCTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIKKGHL*STSCLV
Trigger: CACAAGACAGGAAGTGGATCAAAGATGGCCCTTCTT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCGCCAATCATGACCTTTaGCACAAAGTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGANHDL*HKVDNG
Trigger: GCCATTGTCAACTTTGTGTCAAAGGTCATGATTGGC...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCAGACCAACTCAATCTTaGCATAGTCAGGAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGRPTQS*HSQESG
Trigger: ACCGCTTTCCTGACTATGGCAAGATTGAGTTGGTCT...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGACACACAGCTGAGATaGCAAGGGCATTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLDTQLR*QGHSGV
Trigger: CACACCTGAATGCCCTTGGCATCTCAGCTGTGTGTC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACTCGGGGTCATGCTCTaGAAACAGGTGGCATACGTT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLLGVML*KQVAYV
Trigger: AACGTATGCCACCTGTTTGCAGAGCATGACCCCGAG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGCTGGGCCGGCTCAATaGCGATGCGGATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTAGPAQ*RCGSCW
Trigger: CCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATCAGTCATGTCTTTGTaGGAGCTTGCAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYISVMSL*ELAESS
Trigger: GGAAGACTCTGCAAGCTCCCACAAAGACATGACTGA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATTAGAGAAGGTCACCTaGCTCGCAGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYILEKVT*LAASLS
Trigger: TGACAATGATGCTGCGAGCCAGGTGACCTTCTCTAA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGTGTGGCCACCTTCATaGCCAGGCCGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTVWPPS*PGRRPL
Trigger: GAGGGGCCTACGGCCTGGCCATGAAGGTGGCCACAC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATGCTCTGCAAACAGGTaGCATACGTTGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYICSANR*HTLSVA
Trigger: TGCTACAGACAACGTATGCCACCTGTTTGCAGAGCA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGATGCAAACACCTGCTaGAAGTTGGGTGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHDANTC*KLGVAG
Trigger: GCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATGTTCCCCAGTAGGGTaGGGGTGGACTTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTCSPVG*GWTSGC
Trigger: GCAGCCCGAAGTCCACCCTCACCCTACTGGGGAACA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATCCCACTGTACTTGCTaGGCATATCAGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYISHCTC*AYQSCL
Trigger: AAGACATGACTGATATGCGCAGCAAGTACAGTGGGA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGCATCTCCATTCACATaGACCTGGGCTGGTACCACA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHASPFT*TWAGTT
Trigger: TGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACCCATAGGCCTGCACTaGGGTGGGTGCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTPIGLH*GGCRGL
Trigger: AAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACGATGTTTTCACATATaGTGTTTCCGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIRCFHI*CFRRHR
Trigger: CCTGTGTCTCCGGAAACACCATATGTGAAAACATCG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGACATCCCCACAGTGTaGCTAATAATCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLDIPTV*LIISGQ
Trigger: CTGCCCAGAGATTATTAGCCACACTGTGGGGATGTC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGCCGGACAAGTTCATTaGACAAATCTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIAGQVH*TNLQLS
Trigger: AGAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAGCTCAGCCTTCTCCTaGGGGCTCAGGCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSSAFS*GLRPLR
Trigger: ACGAAGAGGCCTGAGCCCTCAGGAGAAGGCTGAGCT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACCAGGCCAAATCCACTaGGCAGCTGGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTPGQIH*AAGPAQ
Trigger: CTGAGCTGGACCAGCTGCTCAGTGGATTTGGCCTGG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGAAAGGACACCATTATaGTCTTCAGCAACACCATTG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIERTPL*SSATPL
Trigger: CAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACCTGGCCTCCCCATCTaGGGCAAAGCTGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTPGLPI*GKAVLV
Trigger: CACCAGTACAGCTTTGCCTCAGATGGGGAGGCCAGG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAAAGAAGGGCCATCTTTaGTCCACTTCCTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLKKGHL*STSCLV
Trigger: CACAAGACAGGAAGTGGATCAAAGATGGCCCTTCTT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATACAGAACTCATGAGTaGCGAGGGGACTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLYRTHE*RGDFQK
Trigger: CTTCTGAAAGTCCCCTCGGCACTCATGAGTTCTGTA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACCACTTCTGAAGGCTTaGAGAAGTCTGGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLPLLKA*RSLEGH
Trigger: ATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATCAGTCATGTCTTTGTaGGAGCTTGCAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLSVMSL*ELAESS
Trigger: GGAAGACTCTGCAAGCTCCCACAAAGACATGACTGA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAACGGTTGGGAGTAACTaGGATGTGGGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTTVGSN*DVGWGL
Trigger: CAGCCCCCACCCCACATCCCAGTTACTCCCAACCGT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAACACCTGCTGAAAGTTaGGTGTTGCAGGCATATCAG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLTPAES*VLQAYQ
Trigger: CTGATATGCCTGCAACACCCAACTTTCAGCAGGTGT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATGGAGCTCTGAGGACTaGAAGCAGGGCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTWSSED*KQGSPG
Trigger: ACCAGGGCTGCCCTGCTTCCAGTCCTCAGAGCTCCA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGAGTTGGCTGCTGTCTaGGGAGAGTTTTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLELAAV*GEFSAI
Trigger: AATAGCAGAAAACTCTCCCCAGACAGCAGCCAACTC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAAAGAAGAGCTTTCTCTaGTTGTCAGTCAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLKKSFL*LSVRVM
Trigger: CATCACCCTGACTGACAATCAGAGAAAGCTCTTCTT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGGCAGGGAAGGACACTaGGATGATACGCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTGREGH*DDTLGD
Trigger: GTCACCGAGCGTATCATCGCAGTGTCCTTCCCTGCC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATGGCGATGCGGATCCTaGTGGGGTTTTCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTWRCGS*WGFQSR
Trigger: TCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACAGTATTGTCCACTGTaGTGCGGCTGCCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTQYCPL*CGCQAW
Trigger: CCAGGCTTGGCAGCCGCAGCACAGTGGACAATACTG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCCACTTCTGAAGGCTTaGAGAAGTCTGGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHPLLKA*RSLEGH
Trigger: ATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAATGGCACTGGCAGGTTaGTCGGGGTCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTMALAG*SGSCSA
Trigger: TGCAGAGCATGACCCCGAGCAACCTGCCAGTGCCAT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGAATCTTCTCAGGTGTaGCCGAGAAGACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHESSQV*PRRPTQ
Trigger: TTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTATGTCATCTTGAAATCTaGGCTGGAGAGCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLCHLEI*AGELYQ
Trigger: CTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACA...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACTTAGAGAAGGTCACCTaGCTCGCAGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHLEKVT*LAASLS
Trigger: TGACAATGATGCTGCGAGCCAGGTGACCTTCTCTAA...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACCTTCAGCATGGCAATaGCTTGTTCTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLPSAWQ*LVLLRC
Trigger: ACATCTCAAGAGAACAAGCCATTGCCATGCTGAAGG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGCCGGACAAGTTCATTaGACAAATCTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNPSLTTVACPGREMWKLAGQVH*TNLQLS
Trigger: AGAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGGAGAACAGCAGGTGTaGGACTCTCAGGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTGEQQV*DSQEPG
Trigger: ACCAGGCTCCTGAGAGTCCCACACCTGCTGTTCTCC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGCTGTCCTCCATGGCTaGACTCAGAACCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTAVLHG*TQNHGP
Trigger: AGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATTGCTGATGCCTCTCTaGACAGCCACTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLLMPL*TATLLL
Trigger: CAGCAGCAGAGTGGCTGTTCAGAGAGGCATCAGCAA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAAACTTCGAAGTGTCTTaGACAAATTTCACAATCACG +
Preference number: 4 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYINFEVS*TNFTIT
Trigger: CGTGATTGTGAAATTTGTTCAAGACACTTCGAAGTT...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGCCAATCATGACCTTTaGCACAAAGTTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHANHDL*HKVDNG
Trigger: GCCATTGTCAACTTTGTGTCAAAGGTCATGATTGGC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATGGGCTGGTACCACATaGCGTGTCCCACTGTACTTG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTWAGTT*RVPLYL
Trigger: CAAGTACAGTGGGACACGGCATGTGGTACCAGCCCA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACTTAAGTACCAAACATTaGAGGCTGCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHLSTKH*RLLPAS
Trigger: TGAAGCAGGGAGCAGCCTGCAATGTTTGGTACTTAA...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGGTTGCTCGGGGTCATaGTCTGCAAACAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTGCSGS*SANRWH
Trigger: ATGCCACCTGTTTGCAGAGCATGACCCCGAGCAACC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACGATGCGGATCCTGCTaGGGTTTTCAGAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTRCGSC*GFQSRH
Trigger: ATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACAAGTAGGACTCCTCTaGACAACTGGCAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTQVGLL*TTGREG
Trigger: TCCTTCCCTGCCAGTTGTTCAGAGGAGTCCTACTTG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAGATGCTCCGATCCTTaGATCTTCTCAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTRCSDP*IFSGVA
Trigger: GGCCACACCTGAGAAGATTCAAGGATCGGAGCATCT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGATGCAAACACCTGCTaGAAGTTGGGTGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTDANTC*KLGVAG
Trigger: GCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAAGGGCGTAATGGAATaGTGGCACACCAAAGCCGTC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTKGVME*WHTKAV
Trigger: GACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATGGCTGAGACGTTGGTaGAGTGCATGTAGGACGATA +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTWLRRW*SACRTI
Trigger: TATCGTCCTACATGCACTTCACCAACGTCTCAGCCA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGTGACTCTGTCATCTTaGAATCTGGGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTVTLSS*NLGWRA
Trigger: AGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCAC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAACCAAGGCCCAGGTCTaGAGAAAGGACACCATTATG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTTKAQV*RKDTIM
Trigger: CATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACTGTGGTTACTGTGTTaGAACCTAAGAAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLWLLC*NLRRFG
Trigger: GCCAAACCTTCTTAGGTTTCAACACAGTAACCACAG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR GCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATTAAGTACCAAACATTaGAGGCTGCTCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLSTKH*RLLPAS
Trigger: TGAAGCAGGGAGCAGCCTGCAATGTTTGGTACTTAA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp GTTCTTGGTTTGAAGAGTTGTCATATTCTTCTCCTCTaGTTGAGTCTGGAATGTGAAGATTGTCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: VLGLKSCHILLL*LSLECEDCQSG
Trigger: ACCAGATTGACAATCTTCACATTCCAGACTCAACAAGAGGAGAAGAATATGACAACTCTTCAAACCAAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp ATCCCAATTCTACACATAGTTACATCTCTGCCCCTTTaGAAACAGAATTCACCACAAAAATCCCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: IPILHIVTSLPL*KQNSPQKSQLN
Trigger: GTTAAGCTGGGATTTTTGTGGTGAATTCTGTTTCAAAAGGGGCAGAGATGTAACTATGTGTAGAATTGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR TCA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGAAAGGACACCATTATaGTCTTCAGCAACACCATTG +
Preference number: 4 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTERTPL*SSATPL
Trigger: CAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
3UTR CAA 72 bp AGAGCTGTCTTCCTGTGTTTCCTCAGATCAGATCCATaGATACCCTTGACTACTTTTATCTTGAGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: RAVFLCFLRSDP*IPLTTFILSKN
Trigger: ATTTTTACTCAAGATAAAAGTAGTCAAGGGTATCAATGGATCTGATCTGAGGAAACACAGGAAGACAGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AATTCTCCCGGCTGGGCGAACCCGCAGCGCGGTCCGGCGGGGCGATaGCCGAAGCGAAGCTGGGCTCCGAGCTGCTCGCGGGCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: NSPGWANPQRGPAGR*PKRSWAPSCSRAGP
Trigger: CGGGCCCGCCCGCGAGCAGCTCGGAGCCCAGCTTCGCTTCGGCCATCGCCCCGCCGGACCGCGCTGCGGGTTCGCCCAGCCGGGAGAATT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS CCA 90 bp GGCTGCCCAGGCAGGCTCACGTTCTGGTTCTGCAGGCCTGGACTGTaGTGGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GCPGRLTFWFCRPGL*WLLAPGDTVRKLWG
Trigger: GCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCCTGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CACTCTGCTGCTGGCTCCACGGTTGGGAGTAACTGGGATGTGGGGTaGGGGCTGGGCAAGGCCAGTATTGTCCACTGTGCTGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HSAAGSTVGSNWDVG*GLGKASIVHCAAAA
Trigger: GGCAGCCGCAGCACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGGAGCCAGCAGCAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TTCCCCAGTAGGGTGAGGGTGGACTTCGGGCTGCTCTCTACCCACTaGCGTTCTGCAGAAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: FPSRVRVDFGLLSTH*RSAEGGLSLLWPGP
Trigger: TGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACCCTCACCCTACTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp TCTGCAGGCCTGGACTGTGGTGGCTGCTGGCTCCGGGTGACACCGTaGGAAAGTTGTGGGGCAGAAAGCCGTTGTCAGCAGCCCCTGTCG +
Preference number: 5 (lower is better)
Translates to: SAGLDCGGCWLRVTP*ESCGAESRCQQPLS
Trigger: CGACAGGGGCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CAGCTGGTCCAGCTCAGCCTTCTCCTGAGGGCTCAGGCCTCTTCGTaGTCCGGGGGTCAGGCGCTCTTCTGTCTTATCAGTCCTGGCGGA +
Preference number: 5 (lower is better)
Translates to: QLVQLSLLLRAQASS*SGGQALFCLISPGG
Trigger: TCCGCCAGGACTGATAAGACAGAAGAGCGCCTGACCCCCGGAGCACGAAGAGGCCTGAGCCCTCAGGAGAAGGCTGAGCTGGACCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp ACAGCCACTCTGCTGCTGGCTCCACGGTTGGGAGTAACTGGGATGTaGGGTGGGGGCTGGGCAAGGCCAGTATTGTCCACTGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TATLLLAPRLGVTGM*GGGWARPVLSTVLR
Trigger: CCGCAGCACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGGAGCCAGCAGCAGAGTGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GGACTGTGGTGGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTTGTaGGGCAGAAAGCCGTTGTCAGCAGCCCCTGTCGTCAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GLWWLLAPGDTVRKL*GRKPLSAAPVVSRG
Trigger: CCCTCTGCTGACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TGCCCAGGCAGGCTCACGTTCTGGTTCTGCAGGCCTGGACTGTGGTaGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTTGTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: CPGRLTFWFCRPGLW*LLAPGDTVRKLWGR
Trigger: TCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GCTGGGCAAGGCCAGTATTGTCCACTGTGCTGCGGCTGCCAAGCCTaGCCTCCCCATCTGAGGCAAAGCTGTACTGGTGAGCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: AGQGQYCPLCCGCQA*PPHLRQSCTGEQPP
Trigger: TGGTGGCTGCTCACCAGTACAGCTTTGCCTCAGATGGGGAGGCCAGGCTTGGCAGCCGCAGCACAGTGGACAATACTGGCCTTGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CAAAGAACGATCACCCTCCGACGCTCTCTTCTTCTCCGGGAGGGGTaGCTGCCCAGGCAGGCTCACGTTCTGGTTCTGCAGGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: QRTITLRRSLLLREG*LPRQAHVLVLQAWT
Trigger: AGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCCTGGGCAGCCACCCCTCCCGGAGAAGAAGAGAGCGTCGGAGGGTGATCGTTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TCCTTTTTCTTAAAGTTGTGCGGACACGTGGTAAATTCTCCCGGCTaGGCGAACCCGCAGCGCGGTCCGGCGGGGCGATGGCCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: SFFLKLCGHVVNSPG*ANPQRGPAGRWPKR
Trigger: TCGCTTCGGCCATCGCCCCGCCGGACCGCGCTGCGGGTTCGCCCAGCCGGGAGAATTTACCACGTGTCCGCACAACTTTAAGAAAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAGCTCGGCTGCAGAGTaGGCTGCTGTCTGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSSAAE*AAVWGE
Trigger: CTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGCT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp GTTCTGGTTCTGCAGGCCTGGACTGTGGTGGCTGCTGGCTCCGGGTaGCACCGTGAGAAAGTTGTGGGGCAGAAAGCCGTTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLVLQAWTVVAAGSG*HREKVVGQKAVVSS
Trigger: GCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AATCTCTGGGCAGCCTCGTGGTTCTCGACCTTTGTGCAAACTGGCTaGGCTGCTCAGCTGGGGCTCAGGTGGACTGAACGGAGGGTAGCG +
Preference number: 5 (lower is better)
Translates to: NLWAASWFSTFVQTG*AAQLGLRWTERRVA
Trigger: CGCTACCCTCCGTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp GCCACTACACCGGAGCCCACTTCCCACACCGTCAGGACACACAGCTaGGATGCCAAGGGCATTCAGGTGTGTGGGGATGGGCTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: ATTPEPTSHTVRTHS*DAKGIQVCGDGLKG
Trigger: ACCTTTGAGCCCATCCCCACACACCTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGACGGTGTGGGAAGTGGGCTCCGGTGTAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp GTTGTCAGCAGCCCCTGTCGTCAGCAGAGGGGTTCCAGGAGCTGGTaGTGTTCCATGGGAATTGACCAGCAAGGTGCCAGCGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: VVSSPCRQQRGSRSW*CSMGIDQQGASVLT
Trigger: GGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCTGCTGACGACAGGGGCTGCTGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp TACACCGGAGCCCACTTCCCACACCGTCAGGACACACAGCTGAGATaGCAAGGGCATTCAGGTGTGTGGGGATGGGCTCAAAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: YTGAHFPHRQDTQLR*QGHSGVWGWAQRWG
Trigger: ACCCCACCTTTGAGCCCATCCCCACACACCTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGACGGTGTGGGAAGTGGGCTCCGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AGGGTGTGGTCTCCGTGGTCTGGACTGCTAGTGGCTGGCATGCCCTaGGGGCTACTAGGGATGCCAGTATCTGAGGCACTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RVWSPWSGLLVAGMP*GLLGMPVSEALFFL
Trigger: GAGGAAGAAGAGTGCCTCAGATACTGGCATCCCTAGTAGCCCCCAGGGCATGCCAGCCACTAGCAGTCCAGACCACGGAGACCACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TCTCTGAACAGCCACTCTGCTGCTGGCTCCACGGTTGGGAGTAACTaGGATGTGGGGTGGGGGCTGGGCAAGGCCAGTATTGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: SLNSHSAAGSTVGSN*DVGWGLGKASIVHC
Trigger: ACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGGAGCCAGCAGCAGAGTGGCTGTTCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AGGTTTGGCTGCCCGCAGGAGGCAAAGCACCCTGAGGCTCTGACATaGACAGCTCATGGCTGTGGAAAGAGGCCTGGAGCTCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: RFGCPQEAKHPEALT*TAHGCGKRPGALRT
Trigger: AGTCCTCAGAGCTCCAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCCTGCGGGCAGCCAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GCCCCTGTCGTCAGCAGAGGGGTTCCAGGAGCTGGTGATGTTCCATaGGAATTGACCAGCAAGGTGCCAGCGTCCTCACCAGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: APVVSRGVPGAGDVP*ELTSKVPASSPGGR
Trigger: TCTTCCACCTGGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCTGCTGACGACAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAAAATGATCCCAGGCTaGGGGCTGGGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRKMIPG*GLGPLQ
Trigger: CTGGAGTGGACCCAGCCCCAAGCCTGGGATCATTTT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGGCCAGGGCCATTGCTaGAAACCGTGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRGQGHC*KPCRMM
Trigger: CATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGAATGGCACTGGCAGGTaGCTCGGGGTCATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVNGTGR*LGVMLC
Trigger: GCAGAGCATGACCCCGAGCAACCTGCCAGTGCCATT...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp CAGTTCGTGGCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTTaGAGGCTTGTCACAGCGGAGAACAGCAGGTGTGGGACTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QFVAVLHGWTQNHGP*RLVTAENSRCGTLR
Trigger: CCTGAGAGTCCCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TTCTGGCTGCTCTTGAGACAGGTGAAAGGACCCAGGTGGGTGGACTaGGGCCCTTCAGAGGAGGAAAGAGTACCCAGGCTGTCCACACTG +
Preference number: 5 (lower is better)
Translates to: FWLLLRQVKGPRWVD*GPSEEERVPRLSTL
Trigger: CAGTGTGGACAGCCTGGGTACTCTTTCCTCCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AGGAGAGAGTTCTGGCTGCTCTTGAGACAGGTGAAAGGACCCAGGTaGGTGGACTGGGGCCCTTCAGAGGAGGAAAGAGTACCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RREFWLLLRQVKGPR*VDWGPSEEERVPRL
Trigger: CAGCCTGGGTACTCTTTCCTCCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CCTGCTGAAAGTTGGGTGTTGCAGGCATATCAGCCCGAAGCATGGTaGGTTTGGGTCCAACGGGGCTCTCTGACATCCCCACAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: PAESWVLQAYQPEAW*VWVQRGSLTSPQCG
Trigger: GCCACACTGTGGGGATGTCAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AAGGCTTGCAGAAGTCTGGAAGGACATTCGGGAAGGGGATGCTCATaGTGCTGCCACTGTGGGGGCTGGAGAAGCCACTGGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: KACRSLEGHSGRGCS*CCHCGGWRSHWMMG
Trigger: CCCCATCATCCAGTGGCTTCTCCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACTTCTGCAAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAAATGGCACTGGCAGGTaGCTCGGGGTCATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQNGTGR*LGVMLC
Trigger: GCAGAGCATGACCCCGAGCAACCTGCCAGTGCCATT...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp GTGTGGCTAATAATCTCTGGGCAGCCTCGTGGTTCTCGACCTTTGTaGAAACTGGCTGGGCTGCTCAGCTGGGGCTCAGGTGGACTGAAC +
Preference number: 5 (lower is better)
Translates to: VWLIISGQPRGSRPL*KLAGLLSWGSGGLN
Trigger: GTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATTATTAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp GGCGTTCTGCAGAAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCATTaGTTGAAACCGTGCAGGATGATGCAAACACCTGCTGAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: GVLQKAGSLSSGQGH*LKPCRMMQTPAESW
Trigger: CCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTGCAGAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CTTCTGAAGGCTTGCAGAAGTCTGGAAGGACATTCGGGAAGGGGATaGTCATGGTGCTGCCACTGTGGGGGCTGGAGAAGCCACTGGATG +
Preference number: 5 (lower is better)
Translates to: LLKACRSLEGHSGRG*SWCCHCGGWRSHWM
Trigger: CATCCAGTGGCTTCTCCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TACCCAAGTCTGGGTGGAATAGTTACTTTGCCCATAGGCCTGCACTaGGGTGGGTGCAGAGGGCTTCCTCAACAGGGGCTGCAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: YPSLGGIVTLPIGLH*GGCRGLPQQGLQRF
Trigger: AAACCGCTGCAGCCCCTGTTGAGGAAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACCCAGACTTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp ACTGGTGAGCAGCCACCATCTGCTGCTGACGTACCCAAGTCTGGGTaGAATAGTTACTTTGCCCATAGGCCTGCACTGGGGTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: TGEQPPSAADVPKSG*NSYFAHRPALGWVQ
Trigger: CTGCACCCACCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACCCAGACTTGGGTACGTCAGCAGCAGATGGTGGCTGCTCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GCTGCTCCCTGCTTCAGCAGCTCGGCTGCAGAGTTGGCTGCTGTCTaGGGAGAGTTTTCTGCTATTTCCTCCAGTGGATCTCTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: AAPCFSSSAAELAAV*GEFSAISSSGSLSG
Trigger: TCCGGAGAGAGATCCACTGGAGGAAATAGCAGAAAACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAGCAGGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACAAAATGATCCCAGGCTaGGGGCTGGGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHKMIPG*GLGPLQ
Trigger: CTGGAGTGGACCCAGCCCCAAGCCTGGGATCATTTT...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGGCCAGGGCCATTGCTaGAAACCGTGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQGQGHC*KPCRMM
Trigger: CATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGATGTTCCATGGGAATaGACCAGCAAGGTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDVPWE*TSKVPA
Trigger: CGCTGGCACCTTGCTGGTCAATTCCCATGGAACATC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGATGTTCCATGGGAATaGACCAGCAAGGTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPDVPWE*TSKVPA
Trigger: CGCTGGCACCTTGCTGGTCAATTCCCATGGAACATC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTGGGGCAGAAAGCCGTaGTCAGCAGCCCCTGTCGTC +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSWGRKP*SAAPVV
Trigger: GACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGACACCGTGAGAAAGTaGTGGGGCAGAAAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPDTVRK*WGRKPL
Trigger: CAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGTCAACCGCACTCCCTTaGGGGTACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRSTALP*GYTQSG
Trigger: TCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGA...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGAACAGGTGGCATACGTaGTCTGTAGCACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRNRWHT*SVALPC
Trigger: ACAGGGCAGTGCTACAGACAACGTATGCCACCTGTT...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp GAGCATGCGTGTGACTTCCTGCAGGCTGTGCAAGTAGGACTCCTCTaGACAACTGGCAGGGAAGGACACTGCGATGATACGCTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: EHACDFLQAVQVGLL*TTGREGHCDDTLGD
Trigger: GTCACCGAGCGTATCATCGCAGTGTCCTTCCCTGCCAGTTGTTCAGAGGAGTCCTACTTGCACAGCCTGCAGGAAGTCACACGCATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp TTGAAACCTAAGAAGGTTTGGCTGCCCGCAGGAGGCAAAGCACCCTaGGGCTCTGACATGGACAGCTCATGGCTGTGGAAAGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LKPKKVWLPAGGKAP*GSDMDSSWLWKEAW
Trigger: CCAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCCTGCGGGCAGCCAAACCTTCTTAGGTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp TCGTCAGCAGAGGGGTTCCAGGAGCTGGTGATGTTCCATGGGAATTaGCCAGCAAGGTGCCAGCGTCCTCACCAGGTGGAAGAACACTTG +
Preference number: 5 (lower is better)
Translates to: SSAEGFQELVMFHGN*PARCQRPHQVEEHL
Trigger: CAAGTGTTCTTCCACCTGGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCTGCTGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp AAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCATTGCTTGAAACCGTaGAGGATGATGCAAACACCTGCTGAAAGTTGGGTGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: KAGSLSSGQGHCLKP*RMMQTPAESWVLQA
Trigger: TGCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CACCCTTCAGCAGCTGGGCCGGCTCAATGGCGATGCGGATCCTGCTaGGGTTTTCAGAGCCGACATTGTAGATTCCAGATGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: HPSAAGPAQWRCGSC*GFQSRHCRFQMCTQ
Trigger: CTGTGTACACATCTGGAATCTACAATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGCTGCTGAAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TCAGTCTCCCGGTCCTTTAGGGCAGCATCTCCATTCACATGGACCTaGGCTGGTACCACATGCCGTGTCCCACTGTACTTGCTGCGCATA +
Preference number: 5 (lower is better)
Translates to: SVSRSFRAASPFTWT*AGTTCRVPLYLLRI
Trigger: TATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGCTGCCCTAAAGGACCGGGAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp ACACCTGCTGAAAGTTGGGTGTTGCAGGCATATCAGCCCGAAGCATaGTGGGTTTGGGTCCAACGGGGCTCTCTGACATCCCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: TPAESWVLQAYQPEA*WVWVQRGSLTSPQC
Trigger: ACACTGTGGGGATGTCAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GACACTGCGATGATACGCTCGGTGACATACGTAAGGTCCAGTTCGTaGCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DTAMIRSVTYVRSSS*LSSMAGLRTTVLEG
Trigger: GCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACGAACTGGACCTTACGTATGTCACCGAGCGTATCATCGCAGTGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCTGTCTTTGTGGGAGCTaGCAGAGTCTTCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPCLCGS*QSLPGQ
Trigger: TTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACA...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGTGTCTTTGTGGGAGCTaGCAGAGTCTTCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVCLCGS*QSLPGQ
Trigger: TTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACA...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGAGTTCTGGCTGCTCTaGAGACAGGTGAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQEFWLL*RQVKGP
Trigger: GGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGGTGGAATAGTTACTTaGCCCATAGGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVGGIVT*PIGLHW
Trigger: CCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp AGCCTGGGGAGGAGCCAGTGTTCGGCTCCTGATGGACTCCATTCGTaGCTCTGTCATCTTGAAATCTGGGCTGGAGAGCTTTACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SLGRSQCSAPDGLHS*LCHLEIWAGELYQD
Trigger: GTCCTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCACGAATGGAGTCCATCAGGAGCCGAACACTGGCTCCTCCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp GTGGGGTCCAGCTCCAGGATCAGCCTGTTGAGTTGCTCAATGGACTaGTCAATATCCAGAGTAGGAGAGCCTGGGGAGGAGCCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: VGSSSRISLLSCSMD*SISRVGEPGEEPVF
Trigger: GAACACTGGCTCCTCCCCAGGCTCTCCTACTCTGGATATTGATCAGTCCATTGAGCAACTCAACAGGCTGATCCTGGAGCTGGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp TGTCACCCTTCAGCAGCTGGGCCGGCTCAATGGCGATGCGGATCCTaGTGGGGTTTTCAGAGCCGACATTGTAGATTCCAGATGTGTACA +
Preference number: 5 (lower is better)
Translates to: CHPSAAGPAQWRCGS*WGFQSRHCRFQMCT
Trigger: TGTACACATCTGGAATCTACAATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGCTGCTGAAGGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp ATTGCAGGCTGCTCCCTGCTTCAGCAGCTCGGCTGCAGAGTTGGCTaGTGTCTGGGGAGAGTTTTCTGCTATTTCCTCCAGTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: IAGCSLLQQLGCRVG*CLGRVFCYFLQWIS
Trigger: AGAGATCCACTGGAGGAAATAGCAGAAAACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAGCAGGGAGCAGCCTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp AGAATGTCAGTCTCCCGGTCCTTTAGGGCAGCATCTCCATTCACATaGACCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RMSVSRSFRAASPFT*TWAGTTCRVPLYLL
Trigger: CAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGCTGCCCTAAAGGACCGGGAGACTGACATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACACAGGCTGCATAGCTaGGTAGAGCTTCAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQHRLHS*VELQKG
Trigger: CCCTTTCTGAAGCTCTACCAAGCTATGCAGCCTGTG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCAGATGCTCCGATCCTaGAATCTTCTCAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHQMLRS*NLLRCG
Trigger: GCCACACCTGAGAAGATTCAAGGATCGGAGCATCTG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAATGTCTTTGTGGGAGCTaGCAGAGTCTTCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQCLCGS*QSLPGQ
Trigger: TTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACA...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCGTGTCCCACTGTACTaGCTGCGCATATCAGTCATG +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHRVPLY*LRISVM
Trigger: CATGACTGATATGCGCAGCAAGTACAGTGGGACACG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACGTGTCCCACTGTACTaGCTGCGCATATCAGTCATG +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQRVPLY*LRISVM
Trigger: CATGACTGATATGCGCAGCAAGTACAGTGGGACACG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGGTGGAATAGTTACTTaGCCCATAGGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHGGIVT*PIGLHW
Trigger: CCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGATCAGCCTGTTGAGTaGCTCAATGGACTGATCAAT +
Preference number: 5 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLDQPVE*LNGLIN
Trigger: ATTGATCAGTCCATTGAGCAACTCAACAGGCTGATC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTAAAATGATCCCAGGCTaGGGGCTGGGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSKMIPG*GLGPLQ
Trigger: CTGGAGTGGACCCAGCCCCAAGCCTGGGATCATTTT...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGCCACTTCTGAAGGCTaGCAGAAGTCTGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQATSEG*QKSGRT
Trigger: TGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACTCAACCGCACTCCCTTaGGGGTACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHSTALP*GYTQSG
Trigger: TCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGA...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGATCCACTTCCTGTCTaGTGGATCCAAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHRDPLPV*WIQSTE
Trigger: TTCTGTGCTTTGGATCCACAAGACAGGAAGTGGATC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CTCCACCCTGGGAAGGACGGGCTTACCGCATTCTTCCGAATCTCTGGGCACAGGGAAGAAGGGCCATCTTaGATCCACTTCCTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: LHPGKDGLTAFFRISGHREEGPS*IHFLSC
Trigger: ACAAGACAGGAAGTGGATCAAAGATGGCCCTTCTTC...CCTGTGCCCAGAGATTCGGAAGAATGCGGTAAGCCCGTCCTTCCCAGGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCTGGTCCAGGTGGACTaGCACAGAGCAGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTLVQVD*HRAGSH
Trigger: GTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCAG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CCCACTGTACTTGCTGCGCATATCAGTCATGTCTTTGTGGGAGCTTaGAGAGTCTTCCAGGCCAAATCCACTGAGCAGCTGGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PTVLAAHISHVFVGA*RVFQAKSTEQLVQL
Trigger: GAGCTGGACCAGCTGCTCAGTGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CATGGACCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTTGCTaGGCATATCAGTCATGTCTTTGTGGGAGCTTGCAGAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: HGPGLVPHAVSHCTC*AYQSCLCGSLQSLP
Trigger: TGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CACAAAGTTGACAATGGCACTGGCAGGTTGCTCGGGGTCATGCTCTaGAAACAGGTGGCATACGTTGTCTGTAGCACTGCCCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: HKVDNGTGRLLGVML*KQVAYVVCSTALFP
Trigger: CGGAAACAGGGCAGTGCTACAGACAACGTATGCCACCTGTTTGCAGAGCATGACCCCGAGCAACCTGCCAGTGCCATTGTCAACTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp AGGGAGTCACCACCTGGGCTTCACATCTCTTGTGGTAGGAATACTTaGAGGCTCGGCAAGCAATCCCTTGACCGTCAATGGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RESPPGLHISCGRNT*RLGKQSLDRQWSVC
Trigger: GCAGACAGACCATTGACGGTCAAGGGATTGCTTGCCGAGCCTGCAAGTATTCCTACCACAAGAGATGTGAAGCCCAGGTGGTGACTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TGCCGTGTCCCACTGTACTTGCTGCGCATATCAGTCATGTCTTTGTaGGAGCTTGCAGAGTCTTCCAGGCCAAATCCACTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CRVPLYLLRISVMSL*ELAESSRPNPLSSW
Trigger: CCAGCTGCTCAGTGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp TCTTCAGCAACACCATTGCCAAAGCCATCAGACAGGAGAGAGTTCTaGCTGCTCTTGAGACAGGTGAAAGGACCCAGGTGGGTGGACTGG +
Preference number: 5 (lower is better)
Translates to: SSATPLPKPSDRREF*LLLRQVKGPRWVDW
Trigger: CCAGTCCACCCACCTGGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTCTCTCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGCATATAGTGCACATCTaGTCAAGAGGAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVHIVHI*SRGGAC
Trigger: GCATGCACCTCCTCTTGACAAGATGTGCACTATATG...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCTGCCATCGATCATATaGAGGTCAGAGGGATATGCA +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPLPSII*RSEGYA
Trigger: TGCATATCCCTCTGACCTCAATATGATCGATGGCAG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATATGGGGCAGAAAGCCGTaGTCAGCAGCCCCTGTCGTC +
Preference number: 5 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIWGRKP*SAAPVV
Trigger: GACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCA...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCCAATGGCTTGTTCTCTaGAGATGTCTGCCTTGTACC +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPQWLVL*RCLPCT
Trigger: GGTACAAGGCAGACATCTCAAGAGAACAAGCCATTG...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCAAATCTCCAGCTTTCTaGTTGAGGTGCAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPKSPAF*LRCRTD
Trigger: GTCTGTCCTGCACCTCAACAAGAAAGCTGGAGATTT...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGCAAAATATGGTTCATTaGAGCACCCTTTCAACCGCA +
Preference number: 5 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLQNMVH*STLSTA
Trigger: TGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTG...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACCACTGGAGGAGGTTCTaGAACCAAGGTCATACTCAG +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHHWRRF*NQGHTQ
Trigger: CTGAGTATGACCTTGGTTCAAGAACCTCCTCCAGTG...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp GTTCCCCTCGGAAGCTGCAGGTACCACAGGAGCATCACGGTAAAAGGCCACGTGGATCCACTTCCTGTCTaGTGGATCCAAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: VPLGSCRYHRSITVKGHVDPLPV*WIQSTE
Trigger: TTCTGTGCTTTGGATCCACAAGACAGGAAGTGGATC...CACGTGGCCTTTTACCGTGATGCTCCTGTGGTACCTGCAGCTTCCGAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp TGGATGACGACCACATGCTGGGGGTCGTTGTTCAGCCAGGACTCCTaGGCCTTACATATAGTGCACATCTTGTCAAGAGGAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: WMTTTCWGSLFSQDS*ALHIVHILSRGGAC
Trigger: GCATGCACCTCCTCTTGACAAGATGTGCACTATATGTAAGGCTCAGGAGTCCTGGCTGAACAACGACCCCCAGCATGTGGTCGTCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp ATCCGCACTCATGTTCTCATAGGAGTCCCATCGAATCAGCGGGTCTaGTGTGTTATAGTCCACGGTCACTCCCTGGTCGCTGTACAGATG +
Preference number: 5 (lower is better)
Translates to: IRTHVLIGVPSNQRV*CVIVHGHSLVAVQM
Trigger: CATCTGTACAGCGACCAGGGAGTGACCGTGGACTATAACACAGCAGACCCGCTGATTCGATGGGACTCCTATGAGAACATGAGTGCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp TCACATGGACCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTTaGTGCGCATATCAGTCATGTCTTTGTGGGAGCTTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SHGPGLVPHAVSHCT*CAYQSCLCGSLQSL
Trigger: AAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGAGTTCTGGCTGCTCTaGAGACAGGTGAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTEFWLL*RQVKGP
Trigger: GGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp CATGCTCCCTCCTTGTACAGCCCTTGTCCTTGGGGCCCTGATGAGGCATTTCCCGCTGTGGTTACTGTGTaGAAACCTAAGAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: HAPSLYSPCPWGPDEAFPAVVTV*KPKKVW
Trigger: CCAAACCTTCTTAGGTTTCAACACAGTAACCACAGC...GGGAAATGCCTCATCAGGGCCCCAAGGACAAGGGCTGTACAAGGAGGGAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGACACCGTGAGAAAGTaGTGGGGCAGAAAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTDTVRK*WGRKPL
Trigger: CAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACTTGAGATGTCTGCCTaGTACCAGAACTTCGAAGTG +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQLEMSA*YQNFEV
Trigger: CACTTCGAAGTTCTGGTACAAGGCAGACATCTCAAG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAAGAAGAAGGGCCATCTTaGATCCACTTCCTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQEEGPS*IHFLSC
Trigger: ACAAGACAGGAAGTGGATCAAAGATGGCCCTTCTTC...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp TATCATTTGGGCTATCTGGCAAAGGTGAGGCCACTTCTGAAGGCTTaGAGAAGTCTGGAAGGACATTCGGGAAGGGGATGCTCATGGTGC +
Preference number: 5 (lower is better)
Translates to: YHLGYLAKVRPLLKA*RSLEGHSGRGCSWC
Trigger: GCACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGCCTCACCTTTGCCAGATAGCCCAAATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp ACTCCACAGACTCTGGGCTTTTTAAAGTCCTTTTTCTTAAAGTTGTaGGGACACGTGGTAAATTCTCCCGGCTGGGCGAACCCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: TPQTLGFLKSFFLKL*GHVVNSPGWANPQR
Trigger: GCGCTGCGGGTTCGCCCAGCCGGGAGAATTTACCACGTGTCCGCACAACTTTAAGAAAAAGGACTTTAAAAAGCCCAGAGTCTGTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS GCA 90 bp ACTCCACAGACTCTGGGCTTTTTAAAGTCCTTTTTCTTAAAGTTGTaGGGACACGTGGTAAATTCTCCCGGCTGGCGTGGACGCCCACGC +
Preference number: 5 (lower is better)
Translates to: TPQTLGFLKSFFLKL*GHVVNSPGWRGRPR
Trigger: GCGTGGGCGTCCACGCCAGCCGGGAGAATTTACCACGTGTCCGCACAACTTTAAGAAAAAGGACTTTAAAAAGCCCAGAGTCTGTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239091.2
CDS CCA 90 bp CCTGGTCGCTGTACAGATGCTCCGATCCTTGAATCTTCTCAGGTGTaGCCGAGAAGACCAACTCAATCTTGCCATAGTCAGGAAAGCGGT +
Preference number: 5 (lower is better)
Translates to: PGRCTDAPILESSQV*PRRPTQSCHSQESG
Trigger: ACCGCTTTCCTGACTATGGCAAGATTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTCAAGGATCGGAGCATCTGTACAGCGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CATTGCTTGAAACCGTGCAGGATGATGCAAACACCTGCTGAAAGTTaGGTGTTGCAGGCATATCAGCCCGAAGCATGGTGGGTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: HCLKPCRMMQTPAES*VLQAYQPEAWWVWV
Trigger: GACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGGCCAGGGCCATTGCTaGAAACCGTGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIGQGHC*KPCRMM
Trigger: CATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AATGGGGGCCCTGCCTCACCCCACTGCCATGTTGAGGGCCCTATGAGGCATCTGGAACTTCGAAGTGTCTaGAACAAATTTCACAATCAC +
Preference number: 5 (lower is better)
Translates to: NGGPASPHCHVEGPMRHLELRSV*NKFHNH
Trigger: GTGATTGTGAAATTTGTTCAAGACACTTCGAAGTTC...CAGATGCCTCATAGGGCCCTCAACATGGCAGTGGGGTGAGGCAGGGCCCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 90 bp AGGGTGTCTACACCAAGGCCCAGGTCTGGAGAAAGGACACCATTATaGTCTTCAGCAACACCATTGCCAAAGCCATCAGACAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RVSTPRPRSGERTPL*SSATPLPKPSDRRE
Trigger: CTCTCTCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGTGTAGACACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp GGACTCCTGAGCCTTACATATAGTGCACATCTTGTCAAGAGGAGGTaGATGCAGCTCGGGCCAGCCCACATCCATGATCTTTGGATTAAG +
Preference number: 5 (lower is better)
Translates to: GLLSLTYSAHLVKRR*MQLGPAHIHDLWIK
Trigger: CTTAATCCAAAGATCATGGATGTGGGCTGGCCCGAGCTGCATGCACCTCCTCTTGACAAGATGTGCACTATATGTAAGGCTCAGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp GAGGTGTTCATCTTCATGGCTCCAGACAGTAGCCCGCTGAGAAACTaGACGTACCGCTTCTGGGAGGGCTCCATTAAAGCTGAAATTTTG +
Preference number: 5 (lower is better)
Translates to: EVFIFMAPDSSPLRN*TYRFWEGSIKAEIL
Trigger: CAAAATTTCAGCTTTAATGGAGCCCTCCCAGAAGCGGTACGTGCAGTTTCTCAGCGGGCTACTGTCTGGAGCCATGAAGATGAACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp TCCGGAATGAGCAGCTTGCAGGGTAAAGCCAAGGGCGTAATGGAATaGTGGCACACCAAAGCCGTCAGGCTCCCAAAATATGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: SGMSSLQGKAKGVME*WHTKAVRLPKYGSF
Trigger: AAATGAACCATATTTTGGGAGCCTGACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTTGGCTTTACCCTGCAAGCTGCTCATTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp CATCCGCTCCCGATCGTAAAGGGTGTCTACACCAAGGCCCAGGTCTaGAGAAAGGACACCATTATGATCTTCAGCAACACCATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: HPLPIVKGVYTKAQV*RKDTIMIFSNTIAK
Trigger: TTTGGCAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGTGTAGACACCCTTTACGATCGGGAGCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 90 bp GGAATGAGCAGCTTGCAGGGTAAAGCCAAGGGCGTAATGGAATGCTaGCACACCAAAGCCGTCAGGCTCCCAAAATATGGTTCATTTGAG +
Preference number: 5 (lower is better)
Translates to: GMSSLQGKAKGVMEC*HTKAVRLPKYGSFE
Trigger: CTCAAATGAACCATATTTTGGGAGCCTGACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTTGGCTTTACCCTGCAAGCTGCTCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCATATAGTGCACATCTaGTCAAGAGGAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSHIVHI*SRGGAC
Trigger: GCATGCACCTCCTCTTGACAAGATGTGCACTATATG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCAGATGCTCCGATCCTaGAATCTTCTCAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGQMLRS*NLLRCG
Trigger: GCCACACCTGAGAAGATTCAAGGATCGGAGCATCTG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACTGGGGCAGAAAGCCGTaGTCAGCAGCCCCTGTCGTC +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHWGRKP*SAAPVV
Trigger: GACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCA...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCTTGAGATGTCTGCCTaGTACCAGAACTTCGAAGTG +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSLEMSA*YQNFEV
Trigger: CACTTCGAAGTTCTGGTACAAGGCAGACATCTCAAG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTCAATGGCTTGTTCTCTaGAGATGTCTGCCTTGTACC +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSQWLVL*RCLPCT
Trigger: GGTACAAGGCAGACATCTCAAGAGAACAAGCCATTG...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTTGCCGGACAAGTTCATaGGACAAATCTCCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSCRTSS*DKSPAF
Trigger: GAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGCA...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGACCACTGTTCCCCTTCCAGCTGACGGGCCAGCTGTCTCTGGTGTGTCTACAACAAAATATGGTTCATTaGAGCACCCTTTCAACCGCA +
Preference number: 5 (lower is better)
Translates to: RPLFPFQLTGQLSLVCLQQNMVH*STLSTA
Trigger: TGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTG...TTGTAGACACACCAGAGACAGCTGGCCCGTCAGCTGGAAGGGGAACAGTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCAACAGGTGGCATACGTaGTCTGTAGCACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGNRWHT*SVALPC
Trigger: ACAGGGCAGTGCTACAGACAACGTATGCCACCTGTT...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp AGAAGACCAACTCAATCTTGCCATAGTCAGGAAAGCGGTCATCTTTaGAGGCGCTGTCCAGTTCTTCCTTTCCAAACAGAAGCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: RRPTQSCHSQESGHL*RRCPVLPFQTEARS
Trigger: GCTACGGGCTTCTGTTTGGAAAGGAAGAACTGGACAGCGCCTGCAAAGATGACCGCTTTCCTGACTATGGCAAGATTGAGTTGGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp ATCCTTGAATCTTCTCAGGTGTGGCCGAGAAGACCAACTCAATCTTaGCATAGTCAGGAAAGCGGTCATCTTTGCAGGCGCTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: ILESSQVWPRRPTQS*HSQESGHLCRRCPV
Trigger: AACTGGACAGCGCCTGCAAAGATGACCGCTTTCCTGACTATGGCAAGATTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTCAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTCATATAGTGCACATCTaGTCAAGAGGAGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTHIVHI*SRGGAC
Trigger: GCATGCACCTCCTCTTGACAAGATGTGCACTATATG...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATACACAGGCTGCATAGCTaGGTAGAGCTTCAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIHRLHS*VELQKG
Trigger: CCCTTTCTGAAGCTCTACCAAGCTATGCAGCCTGTG...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGTGATCACCGTCTCTTaGATGTCTTCAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTVITVS*MSSGEE
Trigger: TTCCTCTCCTGAAGACATCAAAGAGACGGTGATCAC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACGCGTCACACACAGAAGACAGAGCCTTGCCCTACCAGCTGTTGTAGACAGTGCTGTGGTTACTGTGTaGAAACCTAAGAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: TRVTHRRQSLALPAVVDSAVVTV*KPKKVW
Trigger: CCAAACCTTCTTAGGTTTCAACACAGTAACCACAGC...ACTGTCTACAACAGCTGGTAGGGCAAGGCTCTGTCTTCTGTGTGTGACGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ATGAGGCATTTCCCGGGCCAAGATCCATCCACTCAAAATGCGCCTGACTATATAGCCACTTCTGAAGGCTaGCAGAAGTCTGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: MRHFPGQDPSTQNAPDYIATSEG*QKSGRT
Trigger: TGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGC...TATATAGTCAGGCGCATTTTGAGTGGATGGATCTTGGCCCGGGAAATGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTTGCCGGACAAGTTCATaGGACAAATCTCCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTCRTSS*DKSPAF
Trigger: GAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGCA...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCACTGGAGGAGGTTCTaGAACCAAGGTCATACTCAG +
Preference number: 5 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGHWRRF*NQGHTQ
Trigger: CTGAGTATGACCTTGGTTCAAGAACCTCCTCCAGTG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGATCCACTTCCTGTCTaGTGGATCCAAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTDPLPV*WIQSTE
Trigger: TTCTGTGCTTTGGATCCACAAGACAGGAAGTGGATC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCTGGTCCAGGTGGACTaGCACAGAGCAGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHLVQVD*HRAGSH
Trigger: GTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCAG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 90 bp CACCCTTTCAACCGCACTCCCTTTGGGGTACACTCAATCAGGAAATaGCGGACAAGTTCATTGGACAAATCTCCAGCTTTCTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HPFNRTPFGVHSIRK*RTSSLDKSPAFLLR
Trigger: CCTCAACAAGAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGCATTTCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGAAAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGAGTTCTGGCTGCTCTaGAGACAGGTGAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLEFWLL*RQVKGP
Trigger: GGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGCAGCAGGGGGATGCCCATCTTAGCAAGAACCATCACACCTGACTCAGTAACTGCTGTGGTTACTGTGTaGAAACCTAAGAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CSRGMPILARTITPDSVTAVVTV*KPKKVW
Trigger: CCAAACCTTCTTAGGTTTCAACACAGTAACCACAGC...AGTTACTGAGTCAGGTGTGATGGTTCTTGCTAAGATGGGCATCCCCCTGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TGGGTGCCATGGCTACTCAGTCCCTGTCAAGCAGGACAGATGCTCTTCCTCCACGAACTTCGAAGTGTCTaGAACAAATTTCACAATCAC +
Preference number: 5 (lower is better)
Translates to: WVPWLLSPCQAGQMLFLHELRSV*NKFHNH
Trigger: GTGATTGTGAAATTTGTTCAAGACACTTCGAAGTTC...GTGGAGGAAGAGCATCTGTCCTGCTTGACAGGGACTGAGTAGCCATGGCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AGGCTGCTTAAGGCAAATCCATTTGGCAGTACTACAGGAGAAGGATCTCGTGGCCAATGGCTTGTTCTCTaGAGATGTCTGCCTTGTACC +
Preference number: 5 (lower is better)
Translates to: RLLKANPFGSTTGEGSRGQWLVL*RCLPCT
Trigger: GGTACAAGGCAGACATCTCAAGAGAACAAGCCATTG...GCCACGAGATCCTTCTCCTGTAGTACTGCCAAATGGATTTGCCTTAAGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACAGATGCTCCGATCCTaGAATCTTCTCAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLQMLRS*NLLRCG
Trigger: GCCACACCTGAGAAGATTCAAGGATCGGAGCATCTG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACGTGTCCCACTGTACTaGCTGCGCATATCAGTCATG +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLRVPLY*LRISVM
Trigger: CATGACTGATATGCGCAGCAAGTACAGTGGGACACG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAAACAGGTGGCATACGTaGTCTGTAGCACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLNRWHT*SVALPC
Trigger: ACAGGGCAGTGCTACAGACAACGTATGCCACCTGTT...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGGTGGAATAGTTACTTaGCCCATAGGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHGGIVT*PIGLHW
Trigger: CCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAGCTCGGCTGCAGAGTaGGCTGCTGTCTGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSSAAE*AAVWGE
Trigger: CTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGCT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTACTGCCATCGATCATATaGAGGTCAGAGGGATATGCA +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLLPSII*RSEGYA
Trigger: TGCATATCCCTCTGACCTCAATATGATCGATGGCAG...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAATGGCACTGGCAGGTaGCTCGGGGTCATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTNGTGR*LGVMLC
Trigger: GCAGAGCATGACCCCGAGCAACCTGCCAGTGCCATT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp AAAAATCCCAGCTTAACAACTGTAGCCTGTCCTGGACGTGAAATGTGGAAGCTAGATCAGCCTGTTGAGTaGCTCAATGGACTGATCAAT +
Preference number: 5 (lower is better)
Translates to: KNPSLTTVACPGREMWKLDQPVE*LNGLIN
Trigger: ATTGATCAGTCCATTGAGCAACTCAACAGGCTGATC...TAGCTTCCACATTTCACGTCCAGGACAGGCTACAGTTGTTAAGCTGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCTTGAGATGTCTGCCTaGTACCAGAACTTCGAAGTG +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHLEMSA*YQNFEV
Trigger: CACTTCGAAGTTCTGGTACAAGGCAGACATCTCAAG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGATCAGCCTGTTGAGTaGCTCAATGGACTGATCAAT +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHDQPVE*LNGLIN
Trigger: ATTGATCAGTCCATTGAGCAACTCAACAGGCTGATC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGATGTTCCATGGGAATaGACCAGCAAGGTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTDVPWE*TSKVPA
Trigger: CGCTGGCACCTTGCTGGTCAATTCCCATGGAACATC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGCCACTTCTGAAGGCTaGCAGAAGTCTGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTATSEG*QKSGRT
Trigger: TGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACATCAACCGCACTCCCTTaGGGGTACACTCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTSTALP*GYTQSG
Trigger: TCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGA...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACCAAAATATGGTTCATTaGAGCACCCTTTCAACCGCA +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHQNMVH*STLSTA
Trigger: TGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTG...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAGTGATCACCGTCTCTTaGATGTCTTCAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTVITVS*MSSGEE
Trigger: TTCCTCTCCTGAAGACATCAAAGAGACGGTGATCAC...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACACTGCCATCGATCATATaGAGGTCAGAGGGATATGCA +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTLPSII*RSEGYA
Trigger: TGCATATCCCTCTGACCTCAATATGATCGATGGCAG...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp ACACACAGACATACACATGAGCAAAAATGGAATAGTCCACCTGTACACACACACGAACTTCGAAGTGTCTaGAACAAATTTCACAATCAC +
Preference number: 5 (lower is better)
Translates to: THRHTHEQKWNSPPVHTHELRSV*NKFHNH
Trigger: GTGATTGTGAAATTTGTTCAAGACACTTCGAAGTTC...GTGTGTGTGTACAGGTGGACTATTCCATTTTTGCTCATGTGTATGTCTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS-3UTR CAA 90 bp TACAATGTCTTTGACACTGAAGATAAATGCAGTGTGGCTTTTAACATGGATACAAAATCTCCAGCTTTCTaGTTGAGGTGCAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: YNVFDTEDKCSVAFNMDTKSPAF*LRCRTD
Trigger: GTCTGTCCTGCACCTCAACAAGAAAGCTGGAGATTT...TGTATCCATGTTAAAAGCCACACTGCATTTATCTTCAGTGTCAAAGACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GCGGGGCGATGGCCGAAGCGAAGCTGGGCTCCGAGCTaGTCGCGGGCGGGCCCGTCCTCCTGGCTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: AGRWPKRSWAPS*SRAGPSSWLAA
Trigger: GGCGGCCAGCCAGGAGGACGGGCCCGCCCGCGAGCAGCTCGGAGCCCAGCTTCGCTTCGGCCATCGCCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS CCA 72 bp GGCTGGGCGAACCCGCAGCGCGGTCCGGCGGGGCGATaGCCGAAGCGAAGCTGGGCTCCGAGCTGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: GWANPQRGPAGR*PKRSWAPSCSR
Trigger: CCGCGAGCAGCTCGGAGCCCAGCTTCGCTTCGGCCATCGCCCCGCCGGACCGCGCTGCGGGTTCGCCCAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS GCA 72 bp GGTGGACTTCGGGCTGCTCTCTACCCACTGGCGTTCTaGAGAAGGCGGGCTCTCTCTCCTCTGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GGLRAALYPLAF*RRRALSPLARA
Trigger: GGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ACTGGGATGTGGGGTGGGGGCTGGGCAAGGCCAGTATaGTCCACTGTGCTGCGGCTGCCAAGCCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TGMWGGGWARPV*STVLRLPSLAS
Trigger: GGAGGCCAGGCTTGGCAGCCGCAGCACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCTGAGTCGCTGCTGACTGACAGGGTGTGGTCTCCGTaGTCTGGACTGCTAGTGGCTGGCATGCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PESLLTDRVWSP*SGLLVAGMPWG
Trigger: CCCCCAGGGCATGCCAGCCACTAGCAGTCCAGACCACGGAGACCACACCCTGTCAGTCAGCAGCGACTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCACGGTTGGGAGTAACTGGGATGTGGGGTGGGGGCTaGGCAAGGCCAGTATTGTCCACTGTGCTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PRLGVTGMWGGG*ARPVLSTVLRL
Trigger: CAGCCGCAGCACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AGGGTGAGGGTGGACTTCGGGCTGCTCTCTACCCACTaGCGTTCTGCAGAAGGCGGGCTCTCTCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: RVRVDFGLLSTH*RSAEGGLSLLW
Trigger: CCAGAGGAGAGAGAGCCCGCCTTCTGCAGAACGCCAGTGGGTAGAGAGCAGCCCGAAGTCCACCCTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GGCAGGCTCACGTTCTGGTTCTGCAGGCCTGGACTGTaGTGGCTGCTGGCTCCGGGTGACACCGTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GRLTFWFCRPGL*WLLAPGDTVRK
Trigger: CTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAGAACGTGAGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp ATCACCCTCCGACGCTCTCTTCTTCTCCGGGAGGGGTaGCTGCCCAGGCAGGCTCACGTTCTGGTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: ITLRRSLLLREG*LPRQAHVLVLQ
Trigger: CTGCAGAACCAGAACGTGAGCCTGCCTGGGCAGCCACCCCTCCCGGAGAAGAAGAGAGCGTCGGAGGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp CCTGGACTGTGGTGGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTaGTGGGGCAGAAAGCCGTTGTCAGCAGCCCCTGTCGTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PGLWWLLAPGDTVRK*WGRKPLSAAPVVSR
Trigger: TCTGCTGACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp CCGGAGCCCACTTCCCACACCGTCAGGACACACAGCTaGGATGCCAAGGGCATTCAGGTGTGTGGGGATGGG +
Preference number: 6 (lower is better)
Translates to: PEPTSHTVRTHS*DAKGIQVCGDG
Trigger: CCCATCCCCACACACCTGAATGCCCTTGGCATCTCAGCTGTGTGTCCTGACGGTGTGGGAAGTGGGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp CTGCAGGCCTGGACTGTGGTGGCTGCTGGCTCCGGGTaGCACCGTGAGAAAGTTGTGGGGCAGAAAGCCGTT +
Preference number: 6 (lower is better)
Translates to: LQAWTVVAAGSG*HREKVVGQKAV
Trigger: AACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CAGGGTGTGGTCTCCGTGGTCTGGACTGCTAGTGGCTaGCATGCCCTGGGGGCTACTAGGGATGCCAGTATC +
Preference number: 6 (lower is better)
Translates to: QGVVSVVWTASG*HALGATRDASI
Trigger: GATACTGGCATCCCTAGTAGCCCCCAGGGCATGCCAGCCACTAGCAGTCCAGACCACGGAGACCACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GCTGGCTCCACGGTTGGGAGTAACTGGGATGTGGGGTaGGGGCTGGGCAAGGCCAGTATTGTCCACTGTGCT +
Preference number: 6 (lower is better)
Translates to: AGSTVGSNWDVG*GLGKASIVHCA
Trigger: AGCACAGTGGACAATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AGCCACTCTGCTGCTGGCTCCACGGTTGGGAGTAACTaGGATGTGGGGTGGGGGCTGGGCAAGGCCAGTATT +
Preference number: 6 (lower is better)
Translates to: SHSAAGSTVGSN*DVGWGLGKASI
Trigger: AATACTGGCCTTGCCCAGCCCCCACCCCACATCCCAGTTACTCCCAACCGTGGAGCCAGCAGCAGAGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GCAGCCTCGTGGTTCTCGACCTTTGTGCAAACTGGCTaGGCTGCTCAGCTGGGGCTCAGGTGGACTGAACGG +
Preference number: 6 (lower is better)
Translates to: AASWFSTFVQTG*AAQLGLRWTER
Trigger: CCGTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp TGGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTTGTaGGGCAGAAAGCCGTTGTCAGCAGCCCCTGTCGTC +
Preference number: 6 (lower is better)
Translates to: WLLAPGDTVRKL*GRKPLSAAPVV
Trigger: GACGACAGGGGCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp ACAGCAGGTGTGGGACTCTCAGGAGCCTGGTCCAGGTaGACTTGCACAGAGCAGGGAGTCACCACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: TAGVGLSGAWSR*TCTEQGVTTWA
Trigger: AGCCCAGGTGGTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCCCACACCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp TGGTGGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTaGTGGGGCAGAAAGCCGTTGTCAGCAGCCCCTGTC +
Preference number: 6 (lower is better)
Translates to: WWLLAPGDTVRK*WGRKPLSAAPV
Trigger: GACAGGGGCTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp TTGGCTGCCCGCAGGAGGCAAAGCACCCTGAGGCTCTaGCATGGACAGCTCATGGCTGTGGAAAGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: LAARRRQSTLRL*HGQLMAVERGL
Trigger: CAGGCCTCTTTCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCCTGCGGGCAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp CTGGACTGTGGTGGCTGCTGGCTCCGGGTGACACCGTaGGAAAGTTGTGGGGCAGAAAGCCGTTGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LDCGGCWLRVTP*ESCGAESRCQQ
Trigger: CTGCTGACAACGGCTTTCTGCCCCACAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CAGCTCAGCCTTCTCCTGAGGGCTCAGGCCTCTTCGTaGTCCGGGGGTCAGGCGCTCTTCTGTCTTATCAGT +
Preference number: 6 (lower is better)
Translates to: QLSLLLRAQASS*SGGQALFCLIS
Trigger: ACTGATAAGACAGAAGAGCGCCTGACCCCCGGAGCACGAAGAGGCCTGAGCCCTCAGGAGAAGGCTGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GGTGTGGGACTCTCAGGAGCCTGGTCCAGGTGGACTTaGACAGAGCAGGGAGTCACCACCTGGGCTTCACAT +
Preference number: 6 (lower is better)
Translates to: GVGLSGAWSRWT*TEQGVTTWASH
Trigger: ATGTGAAGCCCAGGTGGTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GGCCAGTATTGTCCACTGTGCTGCGGCTGCCAAGCCTaGCCTCCCCATCTGAGGCAAAGCTGTACTGGTGAG +
Preference number: 6 (lower is better)
Translates to: GQYCPLCCGCQA*PPHLRQSCTGE
Trigger: CTCACCAGTACAGCTTTGCCTCAGATGGGGAGGCCAGGCTTGGCAGCCGCAGCACAGTGGACAATACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CAGCTGAGATGCCAAGGGCATTCAGGTGTGTGGGGATaGGCTCAAAGGTGGGGTCCAGCTCCAGGATCAGCC +
Preference number: 6 (lower is better)
Translates to: QLRCQGHSGVWG*AQRWGPAPGSA
Trigger: GGCTGATCCTGGAGCTGGACCCCACCTTTGAGCCCATCCCCACACACCTGAATGCCCTTGGCATCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AGGCTCACGTTCTGGTTCTGCAGGCCTGGACTGTGGTaGCTGCTGGCTCCGGGTGACACCGTGAGAAAGTTG +
Preference number: 6 (lower is better)
Translates to: RLTFWFCRPGLW*LLAPGDTVRKL
Trigger: CAACTTTCTCACGGTGTCACCCGGAGCCAGCAGCCACCACAGTCCAGGCCTGCAGAACCAGAACGTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp AGGTGTGGGACTCTCAGGAGCCTGGTCCAGGTGGACTaGCACAGAGCAGGGAGTCACCACCTGGGCTTCACA +
Preference number: 6 (lower is better)
Translates to: RCGTLRSLVQVD*HRAGSHHLGFT
Trigger: TGTGAAGCCCAGGTGGTGACTCCCTGCTCTGTGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCCCACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TGGCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTTGAAGGCTaGTCACAGCGGAGAACAGCAGGTGTGGGACTCTCAGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: WLSSMAGLRTTVLEG*SQRRTAGVGLSGAW
Trigger: CCAGGCTCCTGAGAGTCCCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp GCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTTaGAGGCTTGTCACAGCGGAGAACAGCAGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AVLHGWTQNHGP*RLVTAENSRCG
Trigger: CCCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TGTCACCCTTCAGCAGCTGGGCCGGCTCAATGGCGATaGGGATCCTGCTGGGGTTTTCAGAGCCGACATTGT +
Preference number: 6 (lower is better)
Translates to: CHPSAAGPAQWR*GSCWGFQSRHC
Trigger: ACAATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGCTGCTGAAGGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp AGTCTGGAAGGACATTCGGGAAGGGGATGCTCATGGTaGTGCCACTGTGGGGGCTGGAGAAGCCACTGGATG +
Preference number: 6 (lower is better)
Translates to: SLEGHSGRGCSW*CHCGGWRSHWM
Trigger: CATCCAGTGGCTTCTCCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GTCTCCCGGTCCTTTAGGGCAGCATCTCCATTCACATaGACCTGGGCTGGTACCACATGCCGTGTCCCACTG +
Preference number: 6 (lower is better)
Translates to: VSRSFRAASPFT*TWAGTTCRVPL
Trigger: CAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGCTGCCCTAAAGGACCGGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CTCTTGAGACAGGTGAAAGGACCCAGGTGGGTGGACTaGGGCCCTTCAGAGGAGGAAAGAGTACCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLRQVKGPRWVD*GPSEEERVPRL
Trigger: CAGCCTGGGTACTCTTTCCTCCTCTGAAGGGCCCCAGTCCACCCACCTGGGTCCTTTCACCTGTCTCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp TGGAATAGTTACTTTGCCCATAGGCCTGCACTGGGGTaGGTGCAGAGGGCTTCCTCAACAGGGGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: WNSYFAHRPALG*VQRASSTGAAA
Trigger: CGCTGCAGCCCCTGTTGAGGAAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CACTGGCGTTCTGCAGAAGGCGGGCTCTCTCTCCTCTaGCCAGGGCCATTGCTTGAAACCGTGCAGGATGAT +
Preference number: 6 (lower is better)
Translates to: HWRSAEGGLSLL*PGPLLETVQDD
Trigger: ATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTGCAGAACGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AGAAGTCTGGAAGGACATTCGGGAAGGGGATGCTCATaGTGCTGCCACTGTGGGGGCTGGAGAAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: RSLEGHSGRGCS*CCHCGGWRSHW
Trigger: CCAGTGGCTTCTCCAGCCCCCACAGTGGCAGCACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GGTGTTGCAGGCATATCAGCCCGAAGCATGGTGGGTTaGGGTCCAACGGGGCTCTCTGACATCCCCACAGTG +
Preference number: 6 (lower is better)
Translates to: GVAGISARSMVG*GPTGLSDIPTV
Trigger: CACTGTGGGGATGTCAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GGCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTaGAAGGCTTGTCACAGCGGAGAACAGCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GCPPWLDSEPRS*KACHSGEQQVW
Trigger: CCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp CCAGTTCGTGGCTGTCCTCCATGGCTGGACTCAGAACCACGGTCCTaGAAGGCTTGTCACAGCGGAGAACAGCAGGTGTGGGACTCTCAG +
Preference number: 6 (lower is better)
Translates to: PVRGCPPWLDSEPRS*KACHSGEQQVWDSQ
Trigger: CTGAGAGTCCCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACGAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp ACAGTGTGGCTAATAATCTCTGGGCAGCCTCGTGGTTCTCGACCTTaGTGCAAACTGGCTGGGCTGCTCAGCTGGGGCTCAGGTGGACTG +
Preference number: 6 (lower is better)
Translates to: TVWLIISGQPRGSRP*CKLAGLLSWGSGGL
Trigger: CAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATTATTAGCCACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp AACTGGCTGGGCTGCTCAGCTGGGGCTCAGGTGGACTaGACGGAGGGTAGCGTGGCGATGTTTTCACATATG +
Preference number: 6 (lower is better)
Translates to: NWLGCSAGAQVD*TEGSVAMFSHM
Trigger: CATATGTGAAAACATCGCCACGCTACCCTCCGTTCAGTCCACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TCAGCAGCTGGGCCGGCTCAATGGCGATGCGGATCCTaGTGGGGTTTTCAGAGCCGACATTGTAGATTCCAG +
Preference number: 6 (lower is better)
Translates to: SAAGPAQWRCGS*WGFQSRHCRFQ
Trigger: CTGGAATCTACAATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp ATAATCTCTGGGCAGCCTCGTGGTTCTCGACCTTTGTaGAAACTGGCTGGGCTGCTCAGCTGGGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: IISGQPRGSRPL*KLAGLLSWGSG
Trigger: ACCTGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CAGAAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCATTaGTTGAAACCGTGCAGGATGATGCAAACACCTGCT +
Preference number: 6 (lower is better)
Translates to: QKAGSLSSGQGH*LKPCRMMQTPA
Trigger: AGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GCAGCTGGGCCGGCTCAATGGCGATGCGGATCCTGCTaGGGTTTTCAGAGCCGACATTGTAGATTCCAGATG +
Preference number: 6 (lower is better)
Translates to: AAGPAQWRCGSC*GFQSRHCRFQM
Trigger: CATCTGGAATCTACAATGTCGGCTCTGAAAACCCCAGCAGGATCCGCATCGCCATTGAGCCGGCCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GTGTTGCAGGCATATCAGCCCGAAGCATGGTGGGTTTaGGTCCAACGGGGCTCTCTGACATCCCCACAGTGT +
Preference number: 6 (lower is better)
Translates to: VLQAYQPEAWWV*VQRGSLTSPQC
Trigger: ACACTGTGGGGATGTCAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GTCAGCAGAGGGGTTCCAGGAGCTGGTGATGTTCCATaGGAATTGACCAGCAAGGTGCCAGCGTCCTCACCA +
Preference number: 6 (lower is better)
Translates to: VSRGVPGAGDVP*ELTSKVPASSP
Trigger: TGGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp TCATGGTGCTGCCACTGTGGGGGCTGGAGAAGCCACTaGATGATGGGGAGACTGAGCCCAAAGAACGATCAC +
Preference number: 6 (lower is better)
Translates to: SWCCHCGGWRSH*MMGRLSPKNDH
Trigger: GTGATCGTTCTTTGGGCTCAGTCTCCCCATCATCCAGTGGCTTCTCCAGCCCCCACAGTGGCAGCACCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp TCCTTGAAGGCTTGTCACAGCGGAGAACAGCAGGTGTaGGACTCTCAGGAGCCTGGTCCAGGTGGACTTGCA +
Preference number: 6 (lower is better)
Translates to: SLKACHSGEQQV*DSQEPGPGGLA
Trigger: TGCAAGTCCACCTGGACCAGGCTCCTGAGAGTCCCACACCTGCTGTTCTCCGCTGTGACAAGCCTTCAAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp CTGCTGACGTACCCAAGTCTGGGTGGAATAGTTACTTaGCCCATAGGCCTGCACTGGGGTGGGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: LLTYPSLGGIVT*PIGLHWGGCRG
Trigger: CCCTCTGCACCCACCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACCCAGACTTGGGTACGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp AGAGGGGTTCCAGGAGCTGGTGATGTTCCATGGGAATaGACCAGCAAGGTGCCAGCGTCCTCACCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: RGVPGAGDVPWE*TSKVPASSPGG
Trigger: TCCACCTGGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp CACCATCTGCTGCTGACGTACCCAAGTCTGGGTGGAATAGTTACTTaGCCCATAGGCCTGCACTGGGGTGGGTGCAGAGGGCTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: HHLLLTYPSLGGIVT*PIGLHWGGCRGLPQ
Trigger: TTGAGGAAGCCCTCTGCACCCACCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACCCAGACTTGGGTACGTCAGCAGCAGATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp GTTCTGCAGAAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCATTGCTaGAAACCGTGCAGGATGATGCAAACACCTGCTGAAAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: VLQKAGSLSSGQGHC*KPCRMMQTPAESWV
Trigger: CACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTTCTGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp GTCGTCAGCAGAGGGGTTCCAGGAGCTGGTGATGTTCCATGGGAATaGACCAGCAAGGTGCCAGCGTCCTCACCAGGTGGAAGAACACTT +
Preference number: 6 (lower is better)
Translates to: VVSRGVPGAGDVPWE*TSKVPASSPGGRTL
Trigger: AAGTGTTCTTCCACCTGGTGAGGACGCTGGCACCTTGCTGGTCAATTCCCATGGAACATCACCAGCTCCTGGAACCCCTCTGCTGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp AAGAAGGTTTGGCTGCCCGCAGGAGGCAAAGCACCCTaGGGCTCTGACATGGACAGCTCATGGCTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: KKVWLPAGGKAP*GSDMDSSWLWK
Trigger: TTTCCACAGCCATGAGCTGTCCATGTCAGAGCCTCAGGGTGCTTTGCCTCCTGCGGGCAGCCAAACCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TGCTCCCTGCTTCAGCAGCTCGGCTGCAGAGTTGGCTaGTGTCTGGGGAGAGTTTTCTGCTATTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: CSLLQQLGCRVG*CLGRVFCYFLQ
Trigger: CTGGAGGAAATAGCAGAAAACTCTCCCCAGACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAGCAGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GACAATGGCACTGGCAGGTTGCTCGGGGTCATGCTCTaGAAACAGGTGGCATACGTTGTCTGTAGCACTGCC +
Preference number: 6 (lower is better)
Translates to: DNGTGRLLGVML*KQVAYVVCSTA
Trigger: GGCAGTGCTACAGACAACGTATGCCACCTGTTTGCAGAGCATGACCCCGAGCAACCTGCCAGTGCCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CGGTCCTTTAGGGCAGCATCTCCATTCACATGGACCTaGGCTGGTACCACATGCCGTGTCCCACTGTACTTG +
Preference number: 6 (lower is better)
Translates to: RSFRAASPFTWT*AGTTCRVPLYL
Trigger: CAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGAATGGAGATGCTGCCCTAAAGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CAGCCACCATCTGCTGCTGACGTACCCAAGTCTGGGTaGAATAGTTACTTTGCCCATAGGCCTGCACTGGGG +
Preference number: 6 (lower is better)
Translates to: QPPSAADVPKSG*NSYFAHRPALG
Trigger: CCCCAGTGCAGGCCTATGGGCAAAGTAACTATTCCACCCAGACTTGGGTACGTCAGCAGCAGATGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CAGCTGGGGCTCAGGTGGACTGAACGGAGGGTAGCGTaGCGATGTTTTCACATATGGTGTTTCCGGAGACAC +
Preference number: 6 (lower is better)
Translates to: QLGLRWTERRVA*RCFHIWCFRRH
Trigger: GTGTCTCCGGAAACACCATATGTGAAAACATCGCCACGCTACCCTCCGTTCAGTCCACCTGAGCCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCCCACAGTGTGGCTAATAATCTCTGGGCAGCCTCGTaGTTCTCGACCTTTGTGCAAACTGGCTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PHSVANNLWAAS*FSTFVQTGWAA
Trigger: AGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATTATTAGCCACACTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GAAAGTTGGGTGTTGCAGGCATATCAGCCCGAAGCATaGTGGGTTTGGGTCCAACGGGGCTCTCTGACATCC +
Preference number: 6 (lower is better)
Translates to: ESWVLQAYQPEA*WVWVQRGSLTS
Trigger: GGATGTCAGAGAGCCCCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp CTAATAATCTCTGGGCAGCCTCGTGGTTCTCGACCTTaGTGCAAACTGGCTGGGCTGCTCAGCTGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: LIISGQPRGSRP*CKLAGLLSWGS
Trigger: TGAGCCCCAGCTGAGCAGCCCAGCCAGTTTGCACAAAGGTCGAGAACCACGAGGCTGCCCAGAGATTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp AAGGCGGGCTCTCTCTCCTCTGGCCAGGGCCATTGCTaGAAACCGTGCAGGATGATGCAAACACCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: KAGSLSSGQGHC*KPCRMMQTPAE
Trigger: TTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGAGCCCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GGGCTGGTACCACATGCCGTGTCCCACTGTACTTGCTaGGCATATCAGTCATGTCTTTGTGGGAGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: GLVPHAVSHCTC*AYQSCLCGSLQ
Trigger: CTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTTaGTGCGCATATCAGTCATGTCTTTGTGGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: PGLVPHAVSHCT*CAYQSCLCGSL
Trigger: CAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CTGGTGAGTCCTTACCAGAGCTACAGAACTCATGAGTaGCGAGGGGACTTTCAGAAGGGTGGCTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: LVSPYQSYRTHE*RGDFQKGGCSP
Trigger: TGGGGAACAGCCACCCTTCTGAAAGTCCCCTCGGCACTCATGAGTTCTGTAGCTCTGGTAAGGACTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CTCAATGGACTGATCAATATCCAGAGTAGGAGAGCCTaGGGAGGAGCCAGTGTTCGGCTCCTGATGGACTCC +
Preference number: 6 (lower is better)
Translates to: LNGLINIQSRRA*GGASVRLLMDS
Trigger: GGAGTCCATCAGGAGCCGAACACTGGCTCCTCCCCAGGCTCTCCTACTCTGGATATTGATCAGTCCATTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCAGCCTTTCCCCATCCACACTTAGAGAAGGTCACCTaGCTCGCAGCATCATTGTCATACTGCCCGATGCTC +
Preference number: 6 (lower is better)
Translates to: PAFPHPHLEKVT*LAASLSYCPML
Trigger: GAGCATCGGGCAGTATGACAATGATGCTGCGAGCCAGGTGACCTTCTCTAAGTGTGGATGGGGAAAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp ATGATACGCTCGGTGACATACGTAAGGTCCAGTTCGTaGCTGTCCTCCATGGCTGGACTCAGAACCACGGTC +
Preference number: 6 (lower is better)
Translates to: MIRSVTYVRSSS*LSSMAGLRTTV
Trigger: GACCGTGGTTCTGAGTCCAGCCATGGAGGACAGCCACGAACTGGACCTTACGTATGTCACCGAGCGTATCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GGGCTATCTGGCAAAGGTGAGGCCACTTCTGAAGGCTaGCAGAAGTCTGGAAGGACATTCGGGAAGGGGATG +
Preference number: 6 (lower is better)
Translates to: GLSGKGEATSEG*QKSGRTFGKGM
Trigger: CATCCCCTTCCCGAATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGCCTCACCTTTGCCAGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp GCGTCCTCACCAGGTGGAAGAACACTTGTTGCTGTGGTTACTGTGTaGAAACCTAAGAAGGTTTGGCTGCCCGCAGGAGGCAAAGCACCC +
Preference number: 6 (lower is better)
Translates to: ASSPGGRTLVAVVTV*KPKKVWLPAGGKAP
Trigger: GGGTGCTTTGCCTCCTGCGGGCAGCCAAACCTTCTTAGGTTTCAACACAGTAACCACAGCAACAAGTGTTCTTCCACCTGGTGAGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp TGTGACTTCCTGCAGGCTGTGCAAGTAGGACTCCTCTaGACAACTGGCAGGGAAGGACACTGCGATGATACG +
Preference number: 6 (lower is better)
Translates to: CDFLQAVQVGLL*TTGREGHCDDT
Trigger: CGTATCATCGCAGTGTCCTTCCCTGCCAGTTGTTCAGAGGAGTCCTACTTGCACAGCCTGCAGGAAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp GATCACCGTCTCTTTGATGTCTTCAGGAGAGGAAAATaGTCCCAGGCTTGGGGCTGGGTCCACTCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: DHRLFDVFRRGK*SQAWGWVHSSL
Trigger: AAGGCTGGAGTGGACCCAGCCCCAAGCCTGGGATCATTTTCCTCTCCTGAAGACATCAAAGAGACGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TCTCTCTCCTCTGGCCAGGGCCATTGCTTGAAACCGTaGAGGATGATGCAAACACCTGCTGAAAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: SLSSGQGHCLKP*RMMQTPAESWV
Trigger: CACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAAGCAATGGCCCTGGCCAGAGGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp ACAGAGTTTAAGTACCAAACATTGCAGGCTGCTCCCTaGTTCAGCAGCTCGGCTGCAGAGTTGGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: TEFKYQTLQAAP*FSSSAAELAAV
Trigger: GACAGCAGCCAACTCTGCAGCCGAGCTGCTGAAGCAGGGAGCAGCCTGCAATGTTTGGTACTTAAACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GGGACTCCATTTCCACAGAGTTTAAGTACCAAACATTaGAGGCTGCTCCCTGCTTCAGCAGCTCGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GTPFPQSLSTKH*RLLPASAARLQ
Trigger: CTGCAGCCGAGCTGCTGAAGCAGGGAGCAGCCTGCAATGTTTGGTACTTAAACTCTGTGGAAATGGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CCACCTGGGCTTCACATCTCTTGTGGTAGGAATACTTaGAGGCTCGGCAAGCAATCCCTTGACCGTCAATGG +
Preference number: 6 (lower is better)
Translates to: PPGLHISCGRNT*RLGKQSLDRQW
Trigger: CCATTGACGGTCAAGGGATTGCTTGCCGAGCCTGCAAGTATTCCTACCACAAGAGATGTGAAGCCCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp ACACCATTGCCAAAGCCATCAGACAGGAGAGAGTTCTaGCTGCTCTTGAGACAGGTGAAAGGACCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: TPLPKPSDRREF*LLLRQVKGPRW
Trigger: CCACCTGGGTCCTTTCACCTGTCTCAAGAGCAGCCAGAACTCTCTCCTGTCTGATGGCTTTGGCAATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp ACTTGCAGGCTCGGCAAGCAATCCCTTGACCGTCAATaGTCTGTCTGCACACTCCACAGACTCTGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: TCRLGKQSLDRQ*SVCTLHRLWAF
Trigger: AAAAGCCCAGAGTCTGTGGAGTGTGCAGACAGACCATTGACGGTCAAGGGATTGCTTGCCGAGCCTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ACCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTaGCTGCGCATATCAGTCATGTCTTTGTGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: TWAGTTCRVPLY*LRISVMSLWEL
Trigger: AAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp CCACACTTAGAGAAGGTCACCTGGCTCGCAGCATCATaGTCATACTGCCCGATGCTCAGCTTACGAAGCCGT +
Preference number: 6 (lower is better)
Translates to: PHLEKVTWLAAS*SYCPMLSLRSR
Trigger: ACGGCTTCGTAAGCTGAGCATCGGGCAGTATGACAATGATGCTGCGAGCCAGGTGACCTTCTCTAAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp TGCCGGACAAGTTCATTGGACAAATCTCCAGCTTTCTaGTTGAGGTGCAGGACAGACGGAGGAGGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: CRTSSLDKSPAF*LRCRTDGGGVA
Trigger: GGCCACACCTCCTCCGTCTGTCCTGCACCTCAACAAGAAAGCTGGAGATTTGTCCAATGAACTTGTCCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GTGGTAGGAATACTTGCAGGCTCGGCAAGCAATCCCTaGACCGTCAATGGTCTGTCTGCACACTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: VVGILAGSASNP*TVNGLSAHSTD
Trigger: GTCTGTGGAGTGTGCAGACAGACCATTGACGGTCAAGGGATTGCTTGCCGAGCCTGCAAGTATTCCTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp ATAGTCCACGGTCACTCCCTGGTCGCTGTACAGATGCTCCGATCCTaGAATCTTCTCAGGTGTGGCCGAGAAGACCAACTCAATCTTGCC +
Preference number: 6 (lower is better)
Translates to: IVHGHSLVAVQMLRS*NLLRCGREDQLNLA
Trigger: GGCAAGATTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTCAAGGATCGGAGCATCTGTACAGCGACCAGGGAGTGACCGTGGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp ACATGCCGTGTCCCACTGTACTTGCTGCGCATATCAGTCATGTCTTaGTGGGAGCTTGCAGAGTCTTCCAGGCCAAATCCACTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: TCRVPLYLLRISVMS*WELAESSRPNPLSS
Trigger: GCTGCTCAGTGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TTCACATGGACCTGGGCTGGTACCACATGCCGTGTCCCACTGTACTaGCTGCGCATATCAGTCATGTCTTTGTGGGAGCTTGCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: FTWTWAGTTCRVPLY*LRISVMSLWELAES
Trigger: AGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGACACGGCATGTGGTACCAGCCCAGGTCCATGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp GCCAGTGTTCGGCTCCTGATGGACTCCATTCGTGACTCTGTCATCTaGAAATCTGGGCTGGAGAGCTTTACCAGGACAGAGCTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: ASVRLLMDSIRDSVI*KSGLESFTRTELLC
Trigger: ACACAGCAGCTCTGTCCTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCACGAATGGAGTCCATCAGGAGCCGAACACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TTGAAACCGTGCAGGATGATGCAAACACCTGCTGAAAGTTGGGTGTaGCAGGCATATCAGCCCGAAGCATGGTGGGTTTGGGTCCAACGG +
Preference number: 6 (lower is better)
Translates to: LKPCRMMQTPAESWV*QAYQPEAWWVWVQR
Trigger: CCGTTGGACCCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp AGGAGCCAGTGTTCGGCTCCTGATGGACTCCATTCGTaGCTCTGTCATCTTGAAATCTGGGCTGGAGAGCTT +
Preference number: 6 (lower is better)
Translates to: RSQCSAPDGLHS*LCHLEIWAGEL
Trigger: AAGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCACGAATGGAGTCCATCAGGAGCCGAACACTGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp AGCTCCAGGATCAGCCTGTTGAGTTGCTCAATGGACTaGTCAATATCCAGAGTAGGAGAGCCTGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SSRISLLSCSMD*SISRVGEPGEE
Trigger: CTCCTCCCCAGGCTCTCCTACTCTGGATATTGATCAGTCCATTGAGCAACTCAACAGGCTGATCCTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TCTTCTCAGGTGTGGCCGAGAAGACCAACTCAATCTTaGCATAGTCAGGAAAGCGGTCATCTTTGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SSQVWPRRPTQS*HSQESGHLCRR
Trigger: GCGCCTGCAAAGATGACCGCTTTCCTGACTATGGCAAGATTGAGTTGGTCTTCTCGGCCACACCTGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp CTTGCTGCGCATATCAGTCATGTCTTTGTGGGAGCTTaGAGAGTCTTCCAGGCCAAATCCACTGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LAAHISHVFVGA*RVFQAKSTEQL
Trigger: CAGCTGCTCAGTGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp AGCAGCTTGCAGGGTAAAGCCAAGGGCGTAATGGAATaGTGGCACACCAAAGCCGTCAGGCTCCCAAAATAT +
Preference number: 6 (lower is better)
Translates to: SSLQGKAKGVME*WHTKAVRLPKY
Trigger: ATATTTTGGGAGCCTGACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTTGGCTTTACCCTGCAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp TTCTTGAACCAAGGTCATACTCAGGGCCTTCTGGACTaGCTGGTGACCAGTGAGGGACTCCATTTCCACAGA +
Preference number: 6 (lower is better)
Translates to: FLNQGHTQGLLD*LVTSEGLHFHR
Trigger: TCTGTGGAAATGGAGTCCCTCACTGGTCACCAGGCAGTCCAGAAGGCCCTGAGTATGACCTTGGTTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AAACCGTGCAGGATGATGCAAACACCTGCTGAAAGTTaGGTGTTGCAGGCATATCAGCCCGAAGCATGGTGG +
Preference number: 6 (lower is better)
Translates to: KPCRMMQTPAES*VLQAYQPEAWW
Trigger: CCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCACGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp AGCTTGCAGGGTAAAGCCAAGGGCGTAATGGAATGCTaGCACACCAAAGCCGTCAGGCTCCCAAAATATGGT +
Preference number: 6 (lower is better)
Translates to: SLQGKAKGVMEC*HTKAVRLPKYG
Trigger: ACCATATTTTGGGAGCCTGACGGCTTTGGTGTGCCAGCATTCCATTACGCCCTTGGCTTTACCCTGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp CGGCTCCTGATGGACTCCATTCGTGACTCTGTCATCTaGAAATCTGGGCTGGAGAGCTTTACCAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: RLLMDSIRDSVI*KSGLESFTRTE
Trigger: CTCTGTCCTGGTAAAGCTCTCCAGCCCAGATTTCAAGATGACAGAGTCACGAATGGAGTCCATCAGGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp TGCAGGATGATGCAAACACCTGCTGAAAGTTGGGTGTaGCAGGCATATCAGCCCGAAGCATGGTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: CRMMQTPAESWV*QAYQPEAWWVW
Trigger: CCAAACCCACCATGCTTCGGGCTGATATGCCTGCAACACCCAACTTTCAGCAGGTGTTTGCATCATCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp CCAGGTGGAAGAACACTTGTTGCTGTGGTTACTGTGTaGAAACCTAAGAAGGTTTGGCTGCCCGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGGRTLVAVVTV*KPKKVWLPAGG
Trigger: GCCTCCTGCGGGCAGCCAAACCTTCTTAGGTTTCAACACAGTAACCACAGCAACAAGTGTTCTTCCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ATTTCCTCCAGTGGATCTCTCTCCGGAATGAGCAGCTaGCAGGGTAAAGCCAAGGGCGTAATGGAATGCTGG +
Preference number: 6 (lower is better)
Translates to: ISSSGSLSGMSS*QGKAKGVMECW
Trigger: CCAGCATTCCATTACGCCCTTGGCTTTACCCTGCAAGCTGCTCATTCCGGAGAGAGATCCACTGGAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TTATCATTTGGGCTATCTGGCAAAGGTGAGGCCACTTCTGAAGGCTaGCAGAAGTCTGGAAGGACATTCGGGAAGGGGATGCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: LSFGLSGKGEATSEG*QKSGRTFGKGMLMV
Trigger: CACCATGAGCATCCCCTTCCCGAATGTCCTTCCAGACTTCTGCAAGCCTTCAGAAGTGGCCTCACCTTTGCCAGATAGCCCAAATGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp CACACTCCACAGACTCTGGGCTTTTTAAAGTCCTTTTTCTTAAAGTaGTGCGGACACGTGGTAAATTCTCCCGGCTGGGCGAACCCGCAG +
Preference number: 6 (lower is better)
Translates to: HTPQTLGFLKSFFLK*CGHVVNSPGWANPQ
Trigger: CTGCGGGTTCGCCCAGCCGGGAGAATTTACCACGTGTCCGCACAACTTTAAGAAAAAGGACTTTAAAAAGCCCAGAGTCTGTGGAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239111.2
CDS CAA 90 bp CACACTCCACAGACTCTGGGCTTTTTAAAGTCCTTTTTCTTAAAGTaGTGCGGACACGTGGTAAATTCTCCCGGCTGGCGTGGACGCCCA +
Preference number: 6 (lower is better)
Translates to: HTPQTLGFLKSFFLK*CGHVVNSPGWRGRP
Trigger: TGGGCGTCCACGCCAGCCGGGAGAATTTACCACGTGTCCGCACAACTTTAAGAAAAAGGACTTTAAAAAGCCCAGAGTCTGTGGAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239091.2
CDS TCA 72 bp ACCACATGCTGGGGGTCGTTGTTCAGCCAGGACTCCTaGGCCTTACATATAGTGCACATCTTGTCAAGAGGA +
Preference number: 6 (lower is better)
Translates to: TTCWGSLFSQDS*ALHIVHILSRG
Trigger: TCCTCTTGACAAGATGTGCACTATATGTAAGGCTCAGGAGTCCTGGCTGAACAACGACCCCCAGCATGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp CAGGTGGAAGAACACTTGTTGCTGTGGTTACTGTGTTaGAACCTAAGAAGGTTTGGCTGCCCGCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: QVEEHLLLWLLC*NLRRFGCPQEA
Trigger: TGCCTCCTGCGGGCAGCCAAACCTTCTTAGGTTTCAACACAGTAACCACAGCAACAAGTGTTCTTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp CACCAAAGCCGTCAGGCTCCCAAAATATGGTTCATTTaGGCACCCTTTCAACCGCACTCCCTTTGGGGTACA +
Preference number: 6 (lower is better)
Translates to: HQSRQAPKIWFI*APFQPHSLWGT
Trigger: TGTACCCCAAAGGGAGTGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTGGGAGCCTGACGGCTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp TTGAAGTGTACCACTGTAGACACTGGAGGAGGTTCTTaGACCAAGGTCATACTCAGGGCCTTCTGGACTGCC +
Preference number: 6 (lower is better)
Translates to: LKCTTVDTGGGS*TKVILRAFWTA
Trigger: GGCAGTCCAGAAGGCCCTGAGTATGACCTTGGTTCAAGAACCTCCTCCAGTGTCTACAGTGGTACACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp AGCCTTACATATAGTGCACATCTTGTCAAGAGGAGGTaGATGCAGCTCGGGCCAGCCCACATCCATGATCTT +
Preference number: 6 (lower is better)
Translates to: SLTYSAHLVKRR*MQLGPAHIHDL
Trigger: AAGATCATGGATGTGGGCTGGCCCGAGCTGCATGCACCTCCTCTTGACAAGATGTGCACTATATGTAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCACTGTACTTGCTGCGCATATCAGTCATGTCTTTGTaGGAGCTTGCAGAGTCTTCCAGGCCAAATCCACTG +
Preference number: 6 (lower is better)
Translates to: PLYLLRISVMSL*ELAESSRPNPL
Trigger: CAGTGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp CCGATCGTAAAGGGTGTCTACACCAAGGCCCAGGTCTaGAGAAAGGACACCATTATGATCTTCAGCAACACC +
Preference number: 6 (lower is better)
Translates to: PIVKGVYTKAQV*RKDTIMIFSNT
Trigger: GGTGTTGCTGAAGATCATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGTGTAGACACCCTTTACGATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GTCCCACTGTACTTGCTGCGCATATCAGTCATGTCTTaGTGGGAGCTTGCAGAGTCTTCCAGGCCAAATCCA +
Preference number: 6 (lower is better)
Translates to: VPLYLLRISVMS*WELAESSRPNP
Trigger: TGGATTTGGCCTGGAAGACTCTGCAAGCTCCCACAAAGACATGACTGATATGCGCAGCAAGTACAGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ACACCAAAGCCGTCAGGCTCCCAAAATATGGTTCATTaGAGCACCCTTTCAACCGCACTCCCTTTGGGGTAC +
Preference number: 6 (lower is better)
Translates to: TPKPSGSQNMVH*STLSTALPLGY
Trigger: GTACCCCAAAGGGAGTGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTGGGAGCCTGACGGCTTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TCGATCATATTGAGGTCAGAGGGATATGCAGTGATCACCGTCTCTTaGATGTCTTCAGGAGAGGAAAATGATCCCAGGCTTGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SIILRSEGYAVITVS*MSSGEENDPRLGAG
Trigger: CCCAGCCCCAAGCCTGGGATCATTTTCCTCTCCTGAAGACATCAAAGAGACGGTGATCACTGCATATCCCTCTGACCTCAATATGATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TCCGGAGACACAGGGAATGATGGGGTCAGACACATAGATGACTCCTaGCTGTTTGGAATCCTGCCATCGATCATATTGAGGTCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: SGDTGNDGVRHIDDS*LFGILPSIILRSEG
Trigger: TCCCTCTGACCTCAATATGATCGATGGCAGGATTCCAAACAGCAAGGAGTCATCTATGTGTCTGACCCCATCATTCCCTGTGTCTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp ACACCAAGGCCCAGGTCTGGAGAAAGGACACCATTATaGTCTTCAGCAACACCATTGCCAAAGCCATCAGAC +
Preference number: 6 (lower is better)
Translates to: TPRPRSGERTPL*SSATPLPKPSD
Trigger: GTCTGATGGCTTTGGCAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTCTCCAGACCTGGGCCTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp GACAGTAGCCCGCTGAGAAACTGCACGTACCGCTTCTaGGAGGGCTCCATTAAAGCTGAAATTTTGTCATCA +
Preference number: 6 (lower is better)
Translates to: DSSPLRNCTYRF*EGSIKAEILSS
Trigger: TGATGACAAAATTTCAGCTTTAATGGAGCCCTCCCAGAAGCGGTACGTGCAGTTTCTCAGCGGGCTACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS TCA 72 bp GGCTTTGTCCTTCAGCATGGCAATGGCTTGTTCTCTTaGGATGTCTGCCTTGTACCAGAACTTCGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: GFVLQHGNGLFS*DVCLVPELRSV
Trigger: GACACTTCGAAGTTCTGGTACAAGGCAGACATCTCAAGAGAACAAGCCATTGCCATGCTGAAGGACAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp GAGAAAGGACACCATTATGATCTTCAGCAACACCATTaGCAAAGCCATCAGACAGGAGAGAGTTCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: EKGHHYDLQQHH*QSHQTGESSGC
Trigger: GCAGCCAGAACTCTCTCCTGTCTGATGGCTTTGGCAATGGTGTTGCTGAAGATCATAATGGTGTCCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CCA 72 bp TGTACAGATGCTCCGATCCTTGAATCTTCTCAGGTGTaGCCGAGAAGACCAACTCAATCTTGCCATAGTCAG +
Preference number: 6 (lower is better)
Translates to: CTDAPILESSQV*PRRPTQSCHSQ
Trigger: CTGACTATGGCAAGATTGAGTTGGTCTTCTCGGCCACACCTGAGAAGATTCAAGGATCGGAGCATCTGTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp GACTCCTTGCTGTTTGGAATCCTGCCATCGATCATATaGAGGTCAGAGGGATATGCAGTGATCACCGTCTCT +
Preference number: 6 (lower is better)
Translates to: DSLLFGILPSII*RSEGYAVITVS
Trigger: AGAGACGGTGATCACTGCATATCCCTCTGACCTCAATATGATCGATGGCAGGATTCCAAACAGCAAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ATGGTTCATTTGAGCACCCTTTCAACCGCACTCCCTTaGGGGTACACTCAATCAGGAAATGCCGGACAAGTT +
Preference number: 6 (lower is better)
Translates to: MVHLSTLSTALP*GYTQSGNAGQV
Trigger: AACTTGTCCGGCATTTCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGAAAGGGTGCTCAAATGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp TCCCAAAATATGGTTCATTTGAGCACCCTTTCAACCGCACTCCCTTaGGGGTACACTCAATCAGGAAATGCCGGACAAGTTCATTGGACA +
Preference number: 6 (lower is better)
Translates to: SQNMVHLSTLSTALP*GYTQSGNAGQVHWT
Trigger: TGTCCAATGAACTTGTCCGGCATTTCCTGATTGAGTGTACCCCAAAGGGAGTGCGGTTGAAAGGGTGCTCAAATGAACCATATTTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp ACTCAATCTTGCCATAGTCAGGAAAGCGGTCATCTTTaGAGGCGCTGTCCAGTTCTTCCTTTCCAAACAGAA +
Preference number: 6 (lower is better)
Translates to: TQSCHSQESGHL*RRCPVLPFQTE
Trigger: TTCTGTTTGGAAAGGAAGAACTGGACAGCGCCTGCAAAGATGACCGCTTTCCTGACTATGGCAAGATTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp TTGAGGTCAGAGGGATATGCAGTGATCACCGTCTCTTaGATGTCTTCAGGAGAGGAAAATGATCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: LRSEGYAVITVS*MSSGEENDPRL
Trigger: AAGCCTGGGATCATTTTCCTCTCCTGAAGACATCAAAGAGACGGTGATCACTGCATATCCCTCTGACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp ACAGGGAATGATGGGGTCAGACACATAGATGACTCCTaGCTGTTTGGAATCCTGCCATCGATCATATTGAGG +
Preference number: 6 (lower is better)
Translates to: TGNDGVRHIDDS*LFGILPSIILR
Trigger: CCTCAATATGATCGATGGCAGGATTCCAAACAGCAAGGAGTCATCTATGTGTCTGACCCCATCATTCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp CACATAGATGACTCCTTGCTGTTTGGAATCCTGCCATCGATCATATaGAGGTCAGAGGGATATGCAGTGATCACCGTCTCTTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: HIDDSLLFGILPSII*RSEGYAVITVSLMS
Trigger: AGACATCAAAGAGACGGTGATCACTGCATATCCCTCTGACCTCAATATGATCGATGGCAGGATTCCAAACAGCAAGGAGTCATCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS GCA 72 bp AATCCTGCCATCGATCATATTGAGGTCAGAGGGATATaGAGTGATCACCGTCTCTTTGATGTCTTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: NPAIDHIEVRGI*SDHRLFDVFRR
Trigger: TCTCCTGAAGACATCAAAGAGACGGTGATCACTGCATATCCCTCTGACCTCAATATGATCGATGGCAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 90 bp ACTTCGAAGTGTCTTGAACAAATTTCACAATCACGAGTTTATCATTaGGGCTATCTGGCAAAGGTGAGGCCACTTCTGAAGGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: TSKCLEQISQSRVYH*GYLAKVRPLLKACR
Trigger: TCTGCAAGCCTTCAGAAGTGGCCTCACCTTTGCCAGATAGCCCAAATGATAAACTCGTGATTGTGAAATTTGTTCAAGACACTTCGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2
CDS CAA 72 bp TGTCTTGAACAAATTTCACAATCACGAGTTTATCATTaGGGCTATCTGGCAAAGGTGAGGCCACTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: CLEQISQSRVYH*GYLAKVRPLLK
Trigger: CTTCAGAAGTGGCCTCACCTTTGCCAGATAGCCCAAATGATAAACTCGTGATTGTGAAATTTGTTCAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020695.13
ENSMUST00000239091.2
ENSMUST00000239111.2