RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055322

Ensembl transcript IDs: ENSMUST00000169786.8, ENSMUST00000185331.7, ENSMUST00000185702.7, ENSMUST00000187281.7, ENSMUST00000187584.7, ENSMUST00000187691.7, ENSMUST00000188208.2, ENSMUST00000189228.2, ENSMUST00000190389.7, ENSMUST00000191104.7, ENSMUST00000191204.7, ENSMUST00000191367.2, ENSMUST00000212888.2, ENSMUST00000239451.2

Found 1480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGGAGGACCATGGGGTTCTTCGGCAGCATTCCCAGAGGTGCTATaGTGTCACCCTGAGCAGCCCAGCCAGAGGGTGTCTGCAATAGTC +
Preference number: 1 (lower is better)
Translates to: VGGPWGSSAAFPEVL*CHPEQPSQRVSAIV
Trigger: GACTATTGCAGACACCCTCTGGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAACCCCATGGTCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 90 bp AGAACCATTGGGGGCTTCCCTAGGCCCCAATCCTGGCTCCACTGGTaGCCCTCTCTGCCATCTCACCTCCAGATATCAGGGACAGTGAAG +
Preference number: 1 (lower is better)
Translates to: RTIGGFPRPQSWLHW*PSLPSHLQISGTVK
Trigger: CTTCACTGTCCCTGATATCTGGAGGTGAGATGGCAGAGAGGGGCACCAGTGGAGCCAGGATTGGGGCCTAGGGAAGCCCCCAATGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 90 bp GTATTGTGGGAGGACCATGGGGTTCTTCGGCAGCATTCCCAGAGGTaGTATGATGTCACCCTGAGCAGCCCAGCCAGAGGGTGTCTGCAA +
Preference number: 1 (lower is better)
Translates to: VLWEDHGVLRQHSQR*YDVTLSSPARGCLQ
Trigger: TTGCAGACACCCTCTGGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAACCCCATGGTCCTCCCACAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 90 bp CCAGAGTCTCTACAGAGGACAGGCCCAGGGTCACTAGAGGGCAGGTaGAGACAGAACTCTATACCCACAAGCTACACTTCCGCAGGAGAC +
Preference number: 1 (lower is better)
Translates to: PESLQRTGPGSLEGR*RQNSIPTSYTSAGD
Trigger: GTCTCCTGCGGAAGTGTAGCTTGTGGGTATAGAGTTCTGTCTGCACCTGCCCTCTAGTGACCCTGGGCCTGTCCTCTGTAGAGACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp TGTGTGCACGTGTGGTCTGTGTGTGTGTGTGTGTGTGCACGCATGTaGGTGTGTGAGAATCACAGTTGGGAAGGGGGCAGGCAGCAGTGT +
Preference number: 1 (lower is better)
Translates to: CVHVWSVCVCVCARM*VCENHSWEGGRQQC
Trigger: ACACTGCTGCCTGCCCCCTTCCCAACTGTGATTCTCACACACTCACATGCGTGCACACACACACACACACACAGACCACACGTGCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp ACTGGTGCCCCTCTCTGCCATCTCACCTCCAGATATCAGGGACAGTaGAGTGCCAAGCCAACCTCATCTTCTGAGTGGCCAGAGGCAGTT +
Preference number: 1 (lower is better)
Translates to: TGAPLCHLTSRYQGQ*SAKPTSSSEWPEAV
Trigger: AACTGCCTCTGGCCACTCAGAAGATGAGGTTGGCTTGGCACTTCACTGTCCCTGATATCTGGAGGTGAGATGGCAGAGAGGGGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp CACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTaGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACC +
Preference number: 1 (lower is better)
Translates to: HFLLSFSTGDPKSWF*IQGGQDSQVPSPHT
Trigger: GGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR TCA 90 bp ATGGGGTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTaGGCAGCCCAGCCAGAGGGTGTCTGCAATAGTCAGACTCCAAAA +
Preference number: 1 (lower is better)
Translates to: MGFFGSIPRGAMMSP*AAQPEGVCNSQTPK
Trigger: TTTTGGAGTCTGACTATTGCAGACACCCTCTGGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp CGTGCTCACATACATACGAGCCAAATGTGGGTTCTCAGGGAGGGCTaGGCTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTG +
Preference number: 1 (lower is better)
Translates to: RAHIHTSQMWVLREG*AENTDTHWVCCSSV
Trigger: CACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAGCCCAGCCCTCCCTGAGAACCCACATTTGGCTCGTATGTATGTGAGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp TTTGTCTCCCCTGCACTTCTCAGACAGCACAAGAACTCTCTCTCCTaGAAGCCCCTTCCTAGAAGGACGCACAGCCAGTGTCTTCCCTAC +
Preference number: 1 (lower is better)
Translates to: FVSPALLRQHKNSLS*KPLPRRTHSQCLPY
Trigger: GTAGGGAAGACACTGGCTGTGCGTCCTTCTAGGAAGGGGCTTTCAGGAGAGAGAGTTCTTGTGCTGTCTGAGAAGTGCAGGGGAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp ACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCA +
Preference number: 1 (lower is better)
Translates to: TLHFLLSFSTGDPKS*FWIQGGQDSQVPSP
Trigger: TGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR TCA 90 bp ACACACCCACACTTACACACTCGAGCGCACACATCCTGTCACCAATaGCCACGGAAACACCAGTCTCAAGATCTTCAGCCAAGGCCTAAG +
Preference number: 1 (lower is better)
Translates to: THPHLHTRAHTSCHQ*PRKHQSQDLQPRPK
Trigger: CTTAGGCCTTGGCTGAAGATCTTGAGACTGGTGTTTCCGTGGTCATTGGTGACAGGATGTGTGCGCTCGAGTGTGTAAGTGTGGGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 90 bp CTAAATTCATACATCCTGTCCTTTGTCCCACAGGCAGTGTGGTCCTaGTGGGGAAACGGAGGCAGAAGGGGAAACAGGGAAGCTTTGGTA +
Preference number: 1 (lower is better)
Translates to: LNSYILSFVPQAVWS*WGNGGRRGNREALV
Trigger: TACCAAAGCTTCCCTGTTTCCCCTTCTGCCTCCGTTTCCCCAGCAGGACCACACTGCCTGTGGGACAAAGGACAGGATGTATGAATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp TGTATCACAAGGGACACAGACAAGCAGAGAGAGCTGTTTGTAATCTaGGTTGAGTGGACACAGGCAGAGTATCGATCAGCGCGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: CITRDTDKQRELFVI*VEWTQAEYRSARGG
Trigger: CCCTCCACGCGCTGATCGATACTCTGCCTGTGTCCACTCAACTCAGATTACAAACAGCTCTCTCTGCTTGTCTGTGTCCCTTGTGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 90 bp AGTCTCGGGAGGCAGGATAAAGAAAACCCAGAGCTGGATGGACACTaGATTCATTTGTCTCCCCTGCACTTCTCAGACAGCACAAGAACT +
Preference number: 1 (lower is better)
Translates to: SLGRQDKENPELDGH*IHLSPLHFSDSTRT
Trigger: AGTTCTTGTGCTGTCTGAGAAGTGCAGGGGAGACAAATGAATGCAGTGTCCATCCAGCTCTGGGTTTTCTTTATCCTGCCTCCCGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp ACCTTGATCACTAAGCCCATTTATTCTTTGGGAAGTAGGGGCTCGTaGTCCCCAGCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCAC +
Preference number: 1 (lower is better)
Translates to: TLITKPIYSLGSRGS*SPADLLSSSSNNVH
Trigger: GTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGCTGGGGATCACGAGCCCCTACTTCCCAAAGAATAAATGGGCTTAGTGATCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp GAGAAATGTCTACTTCTATGTTGGGGAGAAGTAGGATTCATGAGGTaGGGGGTGAGGAAATGCGACATCCAGACATTTGCCTTGAATATC +
Preference number: 1 (lower is better)
Translates to: EKCLLLCWGEVGFMR*GVRKCDIQTFALNI
Trigger: GATATTCAAGGCAAATGTCTGGATGTCGCATTTCCTCACCCCCCACCTCATGAATCCTACTTCTCCCCAACATAGAAGTAGACATTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp TTTGCCTTGAATATCTCAGAGGGAGAAAGACCCCTTGAAGAACCTTaGTCACTAAGCCCATTTATTCTTTGGGAAGTAGGGGCTCGTGAT +
Preference number: 1 (lower is better)
Translates to: FALNISEGERPLEEP*SLSPFILWEVGARD
Trigger: ATCACGAGCCCCTACTTCCCAAAGAATAAATGGGCTTAGTGATCAAGGTTCTTCAAGGGGTCTTTCTCCCTCTGAGATATTCAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp AACAGCATTCCAGCCAGAAGACTCCCCAGACTTTGCGGTAGGGTGTaGACATTTACAAAGAATGGGATGAGAAATGTCTACTTCTATGTT +
Preference number: 1 (lower is better)
Translates to: NSIPARRLPRLCGRV*TFTKNGMRNVYFYV
Trigger: AACATAGAAGTAGACATTTCTCATCCCATTCTTTGTAAATGTCCACACCCTACCGCAAAGTCTGGGGAGTCTTCTGGCTGGAATGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 90 bp CATCCAGACATTTGCCTTGAATATCTCAGAGGGAGAAAGACCCCTTaGAGAACCTTGATCACTAAGCCCATTTATTCTTTGGGAAGTAGG +
Preference number: 1 (lower is better)
Translates to: HPDICLEYLRGRKTP*RTLITKPIYSLGSR
Trigger: CCTACTTCCCAAAGAATAAATGGGCTTAGTGATCAAGGTTCTTCAAGGGGTCTTTCTCCCTCTGAGATATTCAAGGCAAATGTCTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 90 bp CAAAAGAGCCATTGGGTAAAAGTGCTCTTGTTTAAAGGAAATCTTTaGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTG +
Preference number: 1 (lower is better)
Translates to: QKSHWVKVLLFKGNL*QEYRVAYGVLCARV
Trigger: CACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTTTAAACAAGAGCACTTTTACCCAATGGCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCATACAGGGGATTCTaGGTGCCTCTCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPYRGF*VPLFFL
Trigger: AAGGAAGAAGAGAGGCACTCAGAATCCCCTGTATGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGGDPKS*FWIQGG
Trigger: ACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTTACAGAGTGGGGAAGTaGGGACGGGCTTCCCCGGGT +
Preference number: 2 (lower is better)
Translates to: KAWRQERAEPLGWISPRSYRVGK*GRASPG
Trigger: ACCCGGGGAAGCCCGTCCCCACTTCCCCACTCTGTA...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCATACAGGGGATTCTaGGTGCCTCTCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPYRGF*VPLFFL
Trigger: AAGGAAGAAGAGAGGCACTCAGAATCCCCTGTATGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCATACAGGGGATTCTaGGTGCCTCTCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPYRGF*VPLFFL
Trigger: AAGGAAGAAGAGAGGCACTCAGAATCCCCTGTATGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCCATACAGGGGATTCTaGGTGCCTCTCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: CVPCGSASLSEGGGAPASPYRGF*VPLFFL
Trigger: AAGGAAGAAGAGAGGCACTCAGAATCCCCTGTATGG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGTTCTGGATTCAAGGTaGTCAGGATTCACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGVLDSR*SGFTGP
Trigger: GGGACCTGTGAATCCTGACCACCTTGAATCCAGAAC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTTCTGGATTCAAGGTaGTCAGGATTCACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVLDSR*SGFTGP
Trigger: GGGACCTGTGAATCCTGACCACCTTGAATCCAGAAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCAAAGTCCTGGTTCTaGATTCAAGGTGGTCAGGAT +
Preference number: 2 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPKSWF*IQGGQD
Trigger: ATCCTGACCACCTTGAATCCAGAACCAGGACTTTGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCCATACAGGGGATTCTaGGTGCCTCTCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRPYRGF*VPLFFL
Trigger: AAGGAAGAAGAGAGGCACTCAGAATCCCCTGTATGG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCAGGCAGTGTGGTCCTaGTGGGGAAACGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCQAVWS*WGNGGR
Trigger: TCTGCCTCCGTTTCCCCAGCAGGACCACACTGCCTG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 90 bp AGACAGAACTCTATACCCACAAGCTACACTTCCGCAGGAGACAGCTaGTCATCCGACCTGGGACCCTGCCACCCTGTAACCAACCCTCCC +
Preference number: 2 (lower is better)
Translates to: RQNSIPTSYTSAGDS*SSDLGPCHPVTNPP
Trigger: GGGAGGGTTGGTTACAGGGTGGCAGGGTCCCAGGTCGGATGACAAGCTGTCTCCTGCGGAAGTGTAGCTTGTGGGTATAGAGTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 90 bp CTCAAGATCTTCAGCCAAGGCCTAAGTGCAGGGGTGGCCCTAGCTTaGGGTTCTAAGCTCTTCAGGGACCCAAGGCATGGAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LKIFSQGLSAGVALA*GSKLFRDPRHGGRR
Trigger: TCTCCTGCCTCCATGCCTTGGGTCCCTGAAGAGCTTAGAACCCAAAGCTAGGGCCACCCCTGCACTTAGGCCTTGGCTGAAGATCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCCCTAGGCATTGTCAGTaGGCGTGTCCAACTCATCCT +
Preference number: 2 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAPRHCQ*ACPTHP
Trigger: AGGATGAGTTGGACACGCGCACTGACAATGCCTAGG...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTTCAGGCCTGTGGCCATaGAAGCAGCTATCCGCGCTA +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCSGLWP*KQLSAL
Trigger: TAGCGCGGATAGCTGCTTCCATGGCCACAGGCCTGA...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTACCGGTTCAGGCCTGTaGCCATGGAAGCAGCTATCC +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCTGSGL*PWKQLS
Trigger: GGATAGCTGCTTCCATGGCCACAGGCCTGAACCGGT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCAATCCTGGCTCCACTaGTGCCCCTCTCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCQSWLH*CPSLPS
Trigger: AGATGGCAGAGAGGGGCACCAGTGGAGCCAGGATTG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTGGGCCTTTCCAACCCTaGAAATGGACCATAGGACCT +
Preference number: 2 (lower is better)
Translates to: KAWRQERAEPLGWISPRSGPFQP*KWTIGP
Trigger: AGGTCCTATGGTCCATTTGCAGGGTTGGAAAGGCCC...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: QLAGEALGVWLPSIQGILGDPKS*FWIQGG
Trigger: ACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: SWRGFGGVASIHTGDSECGDPKS*FWIQGG
Trigger: ACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTAGATATCAGGGACAGTaGAGTGCCAAGCCAACCTCA +
Preference number: 2 (lower is better)
Translates to: KAWRQERAEPLGWISPRSRYQGQ*SAKPTS
Trigger: TGAGGTTGGCTTGGCACTTCACTGTCCCTGATATCT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTAAGAACTCTCTCTCCTaGAAGCCCCTTCCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: KAWRQERAEPLGWISPRSKNSLS*KPLPRR
Trigger: CCTTCTAGGAAGGGGCTTTCAGGAGAGAGAGTTCTT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGACCGCGCAGAAAAGATaGCATCCTTCCCAGCAGGTA +
Preference number: 2 (lower is better)
Translates to: RTLTHTGCVALQWPRCCETAQKR*HPSQQV
Trigger: TACCTGCTGGGAAGGATGGCATCTTTTCTGCGCGGT...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTAGCCACGCTACGGTTTaGCAGAGAACAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PRDVLRRKHHLLASALVISHATV*QRTRSQ
Trigger: CTGGCTCCTTGTTCTCTGGCAAACCGTAGCGTGGCT...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTTGCATATGGAGTaGTGTGTGCACGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCELHME*CVHVWS
Trigger: AGACCACACGTGCACACAGCACTCCATATGCAACTC...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGAAAACACTTACAGAGTaGGGAAGTGGGGACGGGCTT +
Preference number: 2 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEKTLTE*GSGDGL
Trigger: AAGCCCGTCCCCACTTCCCCACTCTGTAAGTGTTTT...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGGGGCCTTTCCAACCCTaGAAATGGACCATAGGACCT +
Preference number: 2 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRGPFQP*KWTIGP
Trigger: AGGTCCTATGGTCCATTTGCAGGGTTGGAAAGGCCC...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTGCTCTGTGAAATATaGTCCCCCGCCCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: LTSREEASVRFLLSEQEGLLCEI*SPAPKE
Trigger: CTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAA...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTCAGGCCTGTGGCCATaGAAGCAGCTATCCGCGCTA +
Preference number: 2 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCSGLWP*KQLSAL
Trigger: TAGCGCGGATAGCTGCTTCCATGGCCACAGGCCTGA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTGCAGCATGGGAAGGTaGAACCATACACGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCCSMGR*NHTRRP
Trigger: CGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGCA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGCAGGCAGTGTGGTCCTaGTGGGGAAACGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: KEIFGKNTELHMECCVHVQAVWS*WGNGGR
Trigger: TCTGCCTCCGTTTCCCCAGCAGGACCACACTGCCTG...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGTTCTGGATTCAAGGTaGTCAGGATTCACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIVLDSR*SGFTGP
Trigger: GGGACCTGTGAATCCTGACCACCTTGAATCCAGAAC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATTGCTCTGTGAAATATaGTCCCCCGCCCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLLCEI*SPAPKE
Trigger: CTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCCTCCAAGCCAGCTTTaGTCTCCAGGAGACAGAACA +
Preference number: 2 (lower is better)
Translates to: GKNTELHMECCVHVWSVCPPSQL*SPGDRT
Trigger: TGTTCTGTCTCCTGGAGACCAAAGCTGGCTTGGAGG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGATGAACAGTTTGTaGCCAGGGACAATAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCEMNSL*PGTIRQ
Trigger: TTGCCTTATTGTCCCTGGCCACAAACTGTTCATCTC...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGATACAGAGTTGCATATaGAGTGCTGTGTGCACGTGT +
Preference number: 2 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEIQSCI*SAVCTC
Trigger: ACACGTGCACACAGCACTCCATATGCAACTCTGTAT...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCTTCCTCTCCCAACATTaGACTTTCTTCTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSFLSQH*TFFFPS
Trigger: AGAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAA...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTCACTAGAGGGCAGGTaGAGACAGAACTCTATACCC +
Preference number: 2 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSLEGR*RQNSIP
Trigger: GGGTATAGAGTTCTGTCTGCACCTGCCCTCTAGTGA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGCTGCAGGTGCCCATaGCCTCTGTACCAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: KEIFGKNTELHMECCVHVCCRCP*PLYQSL
Trigger: GAGACTCTGGTACAGAGGGCATGGGCACCTGCAGCA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRGDPKS*FWIQGG
Trigger: ACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CAA 90 bp AGGCAGGATAAAGAAAACCCAGAGCTGGATGGACACTGCATTCATTaGTCTCCCCTGCACTTCTCAGACAGCACAAGAACTCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RQDKENPELDGHCIH*SPLHFSDSTRTLSP
Trigger: AGGAGAGAGAGTTCTTGTGCTGTCTGAGAAGTGCAGGGGAGACAAATGAATGCAGTGTCCATCCAGCTCTGGGTTTTCTTTATCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTTCCTCTCCCAACATTaGACTTTCTTCTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LAGEALGVWLPSIQGILSFLSQH*TFFFPS
Trigger: AGAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCACAGGGGATTCTGAGTaGCTCTCTTCTTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSTGDSE*LSSSFL
Trigger: AAGGAAGGAAGAAGAGAGGCACTCAGAATCCCCTGT...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGTTCTGGATTCAAGGTaGTCAGGATTCACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVVLDSR*SGFTGP
Trigger: GGGACCTGTGAATCCTGACCACCTTGAATCCAGAAC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTGAAGCTTTGGTATTGTaGGAGGACCATGGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: GKNTELHMECCVHVWSVCEALVL*EDHGVL
Trigger: AAGAACCCCATGGTCCTCCCACAATACCAAAGCTTC...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR TCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTTTCAAACCTAAGATGTaGACTCTTTCCCAAAACATG +
Preference number: 2 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCFKPKM*TLSQNM
Trigger: CATGTTTTGGGAAAGAGTTCACATCTTAGGTTTGAA...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTTCCTCTCCCAACATTaGACTTTCTTCTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: FGGVASIHTGDSECLSSSFLSQH*TFFFPS
Trigger: AGAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGAAACAGGGAAGCTTTaGTATTGTGGGAGGACCATG +
Preference number: 2 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCETGKL*YCGRTM
Trigger: CATGGTCCTCCCACAATACCAAAGCTTCCCTGTTTC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTGGCACATTTATGCCCTaGAACAAGGAGTCAGAGCAA +
Preference number: 2 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFGTFMP*NKESEQ
Trigger: TTGCTCTGACTCCTTGTTGCAGGGCATAAATGTGCC...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATTCCTCTCCCAACATTaGACTTTCTTCTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRFLSQH*TFFFPS
Trigger: AGAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGCTTTGCGGTAGGGTGTaGACATTTACAAAGAATGGG +
Preference number: 2 (lower is better)
Translates to: KEIFGKNTELHMECCVHVLCGRV*TFTKNG
Trigger: CCCATTCTTTGTAAATGTCCACACCCTACCGCAAAG...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGTCTACTTCTATGTTaGGGAGAAGTAGGATTCATG +
Preference number: 2 (lower is better)
Translates to: KEIFGKNTELHMECCVHVCLLLC*GEVGFM
Trigger: CATGAATCCTACTTCTCCCCAACATAGAAGTAGACA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 90 bp AACGAAACAGATCATTCACAAAAGAGCCATTGGGTAAAAGTGCTCTaGTTTAAAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGA +
Preference number: 2 (lower is better)
Translates to: NETDHSQKSHWVKVL*FKGNLWQEYRVAYG
Trigger: TCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTTTAAACAAGAGCACTTTTACCCAATGGCTCTTTTGTGAATGATCTGTTTCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 72 bp GCGCGTGTCCAACTCATCCTAAGCCCCACGGCACAATaGGCATGCCCAGTTCTCCGGGAGCCCCACCGCGCA +
Preference number: 3 (lower is better)
Translates to: ARVQLILSPTAQ*ACPVLREPHRA
Trigger: TGCGCGGTGGGGCTCCCGGAGAACTGGGCATGCGCATTGTGCCGTGGGGCTTAGGATGAGTTGGACACGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTaGGGGGCCAGGCATGGAAAACAACCGAGACCCTCC +
Preference number: 3 (lower is better)
Translates to: HWVCCSSVASLL*GARHGKQPRPS
Trigger: GGAGGGTCTCGGTTGTTTTCCATGCCTGGCCCCTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CCATGGGGTTCTTCGGCAGCATTCCCAGAGGTGCTATaGTGTCACCCTGAGCAGCCCAGCCAGAGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: PWGSSAAFPEVL*CHPEQPSQRVS
Trigger: AGACACCCTCTGGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAACCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 72 bp ACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTaGTGTGAGGGGCCAGGCATGGAAAACAACCGAGAC +
Preference number: 3 (lower is better)
Translates to: THTGCVALQWPR*CEGPGMENNRD
Trigger: GTCTCGGTTGTTTTCCATGCCTGGCCCCTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp TTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTaGGCAGCCCAGCCAGAGGGTGTCTGCAATAGTCAG +
Preference number: 3 (lower is better)
Translates to: FGSIPRGAMMSP*AAQPEGVCNSQ
Trigger: CTGACTATTGCAGACACCCTCTGGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CCCACATGGCTCAGGAAAGAGTGCAGCATGGGAAGGTaGAACCATACACGAAGGCCGATCCCAGGGCTGGAT +
Preference number: 3 (lower is better)
Translates to: PTWLRKECSMGR*NHTRRPIPGLD
Trigger: ATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGCACTCTTTCCTGAGCCATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 72 bp GTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATaGAGACGTGAACAGCATTCCAGCCAGAAGACTCCC +
Preference number: 3 (lower is better)
Translates to: VKPYTKADPRAG*RREQHSSQKTP
Trigger: GGGAGTCTTCTGGCTGGAATGCTGTTCACGTCTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTaGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: LSFSTGDPKSWF*IQGGQDSQVPS
Trigger: GGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CCA 72 bp GGAGGCAGAAGGGGAAACAGGGAAGCTTTGGTATTGTaGGAGGACCATGGGGTTCTTCGGCAGCATTCCCAG +
Preference number: 3 (lower is better)
Translates to: GGRRGNREALVL*EDHGVLRQHSQ
Trigger: CTGGGAATGCTGCCGAAGAACCCCATGGTCCTCCCACAATACCAAAGCTTCCCTGTTTCCCCTTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTaGCCTCGCTGCTGTGAGGGGCCAGGCATGGAAAAC +
Preference number: 3 (lower is better)
Translates to: RTLTHTGCVALQ*PRCCEGPGMEN
Trigger: GTTTTCCATGCCTGGCCCCTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp GCACCCCAACGTGCTCACATACATACGAGCCAAATGTaGGTTCTCAGGGAGGGCTGGGCTGAGAACACTGAC +
Preference number: 3 (lower is better)
Translates to: APQRAHIHTSQM*VLREGWAENTD
Trigger: GTCAGTGTTCTCAGCCCAGCCCTCCCTGAGAACCCACATTTGGCTCGTATGTATGTGAGCACGTTGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATTTCCTCTCCCAACATaGCACTTTCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGFPLPT*HFLLSF
Trigger: GAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAAA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTTTCCTCTCCCAACATaGCACTTTCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASFPLPT*HFLLSF
Trigger: GAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAAA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR GCA 72 bp CTACAGAGGACAGGCCCAGGGTCACTAGAGGGCAGGTaGAGACAGAACTCTATACCCACAAGCTACACTTCC +
Preference number: 3 (lower is better)
Translates to: LQRTGPGSLEGR*RQNSIPTSYTS
Trigger: GGAAGTGTAGCTTGTGGGTATAGAGTTCTGTCTGCACCTGCCCTCTAGTGACCCTGGGCCTGTCCTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp ACACGACTCCCACATGGCTCAGGAAAGAGTGCAGCATaGGAAGGTGAAACCATACACGAAGGCCGATCCCAG +
Preference number: 3 (lower is better)
Translates to: TRLPHGSGKSAA*EGETIHEGRSQ
Trigger: CTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGCACTCTTTCCTGAGCCATGTGGGAGTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCAGCCACGCTACGGTTaGCCAGAGAACAAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: PRDVLRRKHHLLASALVIQPRYG*PENKEP
Trigger: TGGCTCCTTGTTCTCTGGCAAACCGTAGCGTGGCTG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTTTGCTAGCATCTGCCTaGGTCATTCACACGACTCCC +
Preference number: 3 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCLLASA*VIHTTP
Trigger: GGGAGTCGTGTGAATGACCAAGGCAGATGCTAGCAA...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CCTCTCTGCCATCTCACCTCCAGATATCAGGGACAGTaGAGTGCCAAGCCAACCTCATCTTCTGAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: PLCHLTSRYQGQ*SAKPTSSSEWP
Trigger: TGGCCACTCAGAAGATGAGGTTGGCTTGGCACTTCACTGTCCCTGATATCTGGAGGTGAGATGGCAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CCTGCACTTCTCAGACAGCACAAGAACTCTCTCTCCTaGAAGCCCCTTCCTAGAAGGACGCACAGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: PALLRQHKNSLS*KPLPRRTHSQC
Trigger: ACACTGGCTGTGCGTCCTTCTAGGAAGGGGCTTTCAGGAGAGAGAGTTCTTGTGCTGTCTGAGAAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp ATACATACGAGCCAAATGTGGGTTCTCAGGGAGGGCTaGGCTGAGAACACTGACACACACTGGGTGTGTTGC +
Preference number: 3 (lower is better)
Translates to: IHTSQMWVLREG*AENTDTHWVCC
Trigger: GCAACACACCCAGTGTGTGTCAGTGTTCTCAGCCCAGCCCTCCCTGAGAACCCACATTTGGCTCGTATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp GGAAAACAACCGAGACCCTCCAAGTTTTCAGCCATTTaGGGAGACAGGAGACAACAAGCAAGAGGCCCACCG +
Preference number: 3 (lower is better)
Translates to: GKQPRPSKFSAI*GDRRQQARGPP
Trigger: CGGTGGGCCTCTTGCTTGTTGTCTCCTGTCTCCTCAAATGGCTGAAAACTTGGAGGGTCTCGGTTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGGAGGGAGCTTTTCCATaGCTCTGTGAAATATGGTCC +
Preference number: 3 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEEGAFP*LCEIWS
Trigger: GGACCATATTTCACAGAGCAATGGAAAAGCTCCCTC...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTAGGGAAGCTTTGGTATaGTGGGAGGACCATGGGGTT +
Preference number: 3 (lower is better)
Translates to: PRDVLRRKHHLLASALVIREALV*WEDHGV
Trigger: AACCCCATGGTCCTCCCACAATACCAAAGCTTCCCT...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTCCTCCAAGCCAGCTTaGGTCTCCAGGAGACAGAAC +
Preference number: 3 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCSSKPA*VSRRQN
Trigger: GTTCTGTCTCCTGGAGACCAAAGCTGGCTTGGAGGA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp CTTCAAGCTCTTCTCATTACTGGGTCACATAGAACCTaGCACCCCTCCATATGCCACCGCCCACCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: LQALLITGSHRT*HPSICHRPPQS
Trigger: ACTTTGAGGTGGGCGGTGGCATATGGAGGGGTGTCAGGTTCTATGTGACCCAGTAATGAGAAGAGCTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp TTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTaGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTC +
Preference number: 3 (lower is better)
Translates to: FLLSFSTGDPKS*FWIQGGQDSQV
Trigger: GACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CCA 72 bp GAAGTCTCGGGAGGCAGGATAAAGAAAACCCAGAGCTaGATGGACACTGCATTCATTTGTCTCCCCTGCACT +
Preference number: 3 (lower is better)
Translates to: EVSGGRIKKTQS*MDTAFICLPCT
Trigger: AGTGCAGGGGAGACAAATGAATGCAGTGTCCATCCAGCTCTGGGTTTTCTTTATCCTGCCTCCCGAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp AGGGACACAGACAAGCAGAGAGAGCTGTTTGTAATCTaGGTTGAGTGGACACAGGCAGAGTATCGATCAGCG +
Preference number: 3 (lower is better)
Translates to: RDTDKQRELFVI*VEWTQAEYRSA
Trigger: CGCTGATCGATACTCTGCCTGTGTCCACTCAACTCAGATTACAAACAGCTCTCTCTGCTTGTCTGTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR GCA 72 bp GTGAACAGCATTCCAGCCAGAAGACTCCCCAGACTTTaGGGTAGGGTGTGGACATTTACAAAGAATGGGATG +
Preference number: 3 (lower is better)
Translates to: VNSIPARRLPRL*GRVWTFTKNGM
Trigger: CATCCCATTCTTTGTAAATGTCCACACCCTACCGCAAAGTCTGGGGAGTCTTCTGGCTGGAATGCTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTGAGGGAGCTTTTCCATaGCTCTGTGAAATATGGTCC +
Preference number: 3 (lower is better)
Translates to: GKNTELHMECCVHVWSVCEGAFP*LCEIWS
Trigger: GGACCATATTTCACAGAGCAATGGAAAAGCTCCCTC...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGAGGGAGCTTTTCCATaGCTCTGTGAAATATGGTCC +
Preference number: 3 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSEGAFP*LCEIWS
Trigger: GGACCATATTTCACAGAGCAATGGAAAAGCTCCCTC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTCCTCCAAGCCAGCTTaGGTCTCCAGGAGACAGAAC +
Preference number: 3 (lower is better)
Translates to: KEIFGKNTELHMECCVHVSSKPA*VSRRQN
Trigger: GTTCTGTCTCCTGGAGACCAAAGCTGGCTTGGAGGA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp CCAGCCAGAAGACTCCCCAGACTTTGCGGTAGGGTGTaGACATTTACAAAGAATGGGATGAGAAATGTCTAC +
Preference number: 3 (lower is better)
Translates to: PARRLPRLCGRV*TFTKNGMRNVY
Trigger: GTAGACATTTCTCATCCCATTCTTTGTAAATGTCCACACCCTACCGCAAAGTCTGGGGAGTCTTCTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTATCCAGACATTTGCCTaGAATATCTCAGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: PRDVLRRKHHLLASALVIIQTFA*NISEGE
Trigger: TTCTCCCTCTGAGATATTCAAGGCAAATGTCTGGAT...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTCTTCTTCACCTTTCTTaGAGAAAAGCCACACTCGGG +
Preference number: 3 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCLLHLS*RKATLG
Trigger: CCCGAGTGTGGCTTTTCTCAAAGAAAGGTGAAGAAG...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCTTTCCTCTCCCAACATaGCACTTTCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSFPLPT*HFLLSF
Trigger: GAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAAA...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTTCCTCTCCCAACATaGCACTTTCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: LTSREEASVRFLLSEQEGFPLPT*HFLLSF
Trigger: GAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAAA...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR GCA 72 bp GAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTaGTGTGTGCACGTGTGGTCTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EIFGKNTELHME*CVHVWSVCVCV
Trigger: CACACACACACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp AAATGTGAAAAACTGTCACTGCTTGATGTCATACGCTaGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: KCEKLSLLDVIR*PPATLPPEKKP
Trigger: AGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGACATCAAGCAGTGACAGTTTTTCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATTTCCTCTCCCAACATaGCACTTTCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRFPLPT*HFLLSF
Trigger: GAAGGAAAGAAGAAAGTGCAATGTTGGGAGAGGAAA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR-3UTR CAA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGAGGGAGCTTTTCCATaGCTCTGTGAAATATGGTCC +
Preference number: 3 (lower is better)
Translates to: KEIFGKNTELHMECCVHVEGAFP*LCEIWS
Trigger: GGACCATATTTCACAGAGCAATGGAAAAGCTCCCTC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CCA 72 bp GGTTTGTGTAACTTTATCATTTATAAAGCCATACAATaGATCGTGAGAGGCCAAGCCGCTGTACAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GLCNFIIYKAIQ*IVRGQAAVQRG
Trigger: CCCCCTCTGTACAGCGGCTTGGCCTCTCACGATCCATTGTATGGCTTTATAAATGATAAAGTTACACAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp AATATCTCAGAGGGAGAAAGACCCCTTGAAGAACCTTaGTCACTAAGCCCATTTATTCTTTGGGAAGTAGGG +
Preference number: 3 (lower is better)
Translates to: NISEGERPLEEP*SLSPFILWEVG
Trigger: CCCTACTTCCCAAAGAATAAATGGGCTTAGTGATCAAGGTTCTTCAAGGGGTCTTTCTCCCTCTGAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR TCA 72 bp TTTGCGGTAGGGTGTGGACATTTACAAAGAATGGGATaGGAAATGTCTACTTCTATGTTGGGGAGAAGTAGG +
Preference number: 3 (lower is better)
Translates to: FAVGCGHLQRMG*EMSTSMLGRSR
Trigger: CCTACTTCTCCCCAACATAGAAGTAGACATTTCTCATCCCATTCTTTGTAAATGTCCACACCCTACCGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCTCCGGAGTGGGCCTaGGGGCTCTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPPEWA*GLCRLP
Trigger: AGGCAGCCTGCAGAGCCCCCAGGCCCACTCCGGAGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGTGGGGATCTCTCCTaGTGGCGGGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLSGDLS*WRGGGW
Trigger: CCACCCACCTCCCCGCCAGCAGGAGAGATCCCCACT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLHCVAG*LGRSPP
Trigger: TGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCACGGGTTGGAGCTTaGGGCAGCTGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPRVGA*GSWGST
Trigger: TGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCACTACCCCCACGGGTTaGAGCTTGGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLTTPTG*SLGQLG
Trigger: CCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLVWRAA*GGPLHL
Trigger: GAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACAC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGACAAAGGAGCCCCCTaGGGTCCCGTTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLDKGAP*GPVPQG
Trigger: CCCCTGAGGAACGGGACCCCAGGGGGCTCCTTTGTC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLLLGR*PWELWE
Trigger: CTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLMKRGS*GGWLQV
Trigger: GACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCAT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRLSITG*PPPEWA
Trigger: GGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPLSSRP*HRCPRH
Trigger: GTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCGTTGTCTGTGGTGCTaGCCTGCTTCCGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLRCLWC*PASGPR
Trigger: TCGTGGCCCGGAAGCAGGGCAGCACCACAGACAACG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLGSCGG*LQVQHQ
Trigger: TTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGACTGGGTAAGTGGGTaGGACTGGCGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLDWVSG*DWREDP
Trigger: GGGGTCTTCCCGCCAGTCCCACCCACTTACCCAGTC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCACCAGGGAGAGAGGCTaGGGGCTCCTGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASTRERG*GLLRPR
Trigger: GCGGGGCCTCAGGAGCCCCCAGCCTCTCTCCCTGGT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCATGCCGGTCCAAGCTaGGGCTTCCAGGAACCACGG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLHAGPS*GFQEPR
Trigger: CCGTGGTTCCTGGAAGCCCCAGCTTGGACCGGCATG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGTGGTTGGGAGTGGCTaGCAGGGCAGGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRVVGSG*QGRPCS
Trigger: ACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCAC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCAGGGCCCCACCATTaGCGTGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPGPHH*REPGLG
Trigger: TCCCAGCCCAGGTTCACGTCAATGGTGGGGCCCTGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPMLPPL*PSWMGS
Trigger: GCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCAT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASLSITG*PPPEWA
Trigger: GGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPHCVAG*LGRSPP
Trigger: TGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGGTGTGGGGCTCCCCTaGCGGAAGGCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRGVGLP*RKAAES
Trigger: AGACTCAGCAGCCTTCCGGCAGGGGAGCCCCACACC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCACGTGGTTGGGAGTaGCTGACAGGGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPRGWE*LTGQAV
Trigger: CACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGVWRAA*GGPLHL
Trigger: GAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACAC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGATTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGTGGTTGGGAGTGGCTaGCAGGGCAGGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASVVGSG*QGRPCS
Trigger: ACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCAC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGGCCCCGCAGAGCTATaGGGGCTTGGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGGPAEL*GLGRKV
Trigger: CACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGCTGGGGCTGAGCGATaGGACCAGGGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGAGAER*DQGERL
Trigger: CAGCCTCTCTCCCTGGTCTCATCGCTCAGCCCCAGC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGCCTCTCCCGAGCCTaGACCCCTGCTACCCGATGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQCLSRA*TPATRW
Trigger: CCATCGGGTAGCAGGGGTTCAGGCTCGGGAGAGGCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTGGAGGCTGTGGAGTTaGCAGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLWRLWS*QSRCSQ
Trigger: CTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGMLPPL*PSWMGS
Trigger: GCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCAT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASMLPPL*PSWMGS
Trigger: GCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCAT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAAGTGGGGATCTCTCCTaGTGGCGGGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGSGDLS*WRGGGW
Trigger: CCACCCACCTCCCCGCCAGCAGGAGAGATCCCCACT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGMKRGS*GGWLQV
Trigger: GACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCAT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTCCTCTGGGATGGCTaGCCAATGGGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLLWDG*PMGTIL
Trigger: CAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCACGTGGTTGGGAGTaGCTGACAGGGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPRGWE*LTGQAV
Trigger: CACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACCACGTGGTTGGGAGTaGCTGACAGGGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGPRGWE*LTGQAV
Trigger: CACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTGTGTTCCACGTGGTTaGGAGTGGCTGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLCVPRG*EWLTGQ
Trigger: CTGCCCTGTCAGCCACTCCCAACCACGTGGAACACA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGTGGGCTGGGACAATGTaGCGGCCAGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRWAGTM*RPGEGT
Trigger: TGTGCCCTCCCCTGGCCGCCACATTGTCCCAGCCCA...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGGCTGGGACAATGTaGCGGCCAGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASWAGTM*RPGEGT
Trigger: TGTGCCCTCCCCTGGCCGCCACATTGTCCCAGCCCA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCCACGGGTTGGAGCTTaGGGCAGCTGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASPRVGA*GSWGST
Trigger: TGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACAAAGGAGCCCCCTaGGGTCCCGTTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGDKGAP*GPVPQG
Trigger: CCCCTGAGGAACGGGACCCCAGGGGGCTCCTTTGTC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGACAAAGGAGCCCCCTaGGGTCCCGTTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRDKGAP*GPVPQG
Trigger: CCCCTGAGGAACGGGACCCCAGGGGGCTCCTTTGTC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQVSAQA*ASRSGD
Trigger: GTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACAC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASVSAQA*ASRSGD
Trigger: GTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACAC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGCGGLH*ARCPWP
Trigger: AGGCCATGGACACCTGGCTCAATGCAGACCCCCACA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGCCCCACCATTGACGTaGACCTGGGCTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRAPPLT*TWAGTM
Trigger: CATTGTCCCAGCCCAGGTTCACGTCAATGGTGGGGC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCCAGGGCCCCACCATTaGCGTGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRPGPHH*REPGLG
Trigger: TCCCAGCCCAGGTTCACGTCAATGGTGGGGCCCTGG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACGAATGGGGGCCGAGTaGCTGCTGTGGACAGGAATC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPRMGAE*LLWTGI
Trigger: GATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCGAATGGGGGCCGAGTaGCTGCTGTGGACAGGAATC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGRMGAE*LLWTGI
Trigger: GATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTGCTGCTGTTGCCATaGATTCAGACCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLLLLP*IQTPLH
Trigger: GTGCAGAGGGGTCTGAATTCATGGCAACAGCAGCAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASYGGLC*QLGARL
Trigger: AAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGGCCCCGCAGAGCTATaGGGGCTTGGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRGPAEL*GLGRKV
Trigger: CACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTGGCCTGTGGCCCGGTaGGTGACTCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPWPVAR*VTPYPQ
Trigger: CTGTGGATATGGAGTCACTCACCGGGCCACAGGCCA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRMLPPL*PSWMGS
Trigger: GCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCAT...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTGGGCACTGGTCACTTaGTGTGACCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGWALVT*CDQAGW
Trigger: CCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGGTGGGTGGGGCTGCTaGTGTTGCCATGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLGGWGC*CCHEFR
Trigger: TCTGAATTCATGGCAACAGCAGCAGCCCCACCCACC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGLLLGR*PWELWE
Trigger: CTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASMKRGS*GGWLQV
Trigger: GACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCAT...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPGCCSC*HQQGQA
Trigger: CGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGGCCSC*HQQGQA
Trigger: CGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGTCTGTGGTGCTGCCCTaGTTCCGGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRSVVLP*FRATKP
Trigger: TGGCTTCGTGGCCCGGAAGCAGGGCAGCACCACAGA...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTCTGTGGTGCTGCCCTaGTTCCGGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASSVVLP*FRATKP
Trigger: TGGCTTCGTGGCCCGGAAGCAGGGCAGCACCACAGA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCGTTGTCTGTGGTGCTaGCCTGCTTCCGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASRCLWC*PASGPR
Trigger: TCGTGGCCCGGAAGCAGGGCAGCACCACAGACAACG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCCCCAAGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPPSHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACTTGGGGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPSSGP*VCPTTS
Trigger: AGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGTTTGTCCAGGCCATTaGTCAGTGGGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLVCPGH*SVGTGS
Trigger: AGACCCTGTCCCCACTGACCAATGGCCTGGACAAAC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGGAWGS*GSTSGK
Trigger: CTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGACCCCAAGAGGGGCTaGGAAGAGAGTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGDPKRG*EESGEA
Trigger: GGCTTCTCCACTCTCTTCCCAGCCCCTCTTGGGGTC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGACCCCAAGAGGGGCTaGGAAGAGAGTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRDPKRG*EESGEA
Trigger: GGCTTCTCCACTCTCTTCCCAGCCCCTCTTGGGGTC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGACTGGGTAAGTGGGTaGGACTGGCGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASDWVSG*DWREDP
Trigger: GGGGTCTTCCCGCCAGTCCCACCCACTTACCCAGTC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGACTGGGTAAGTGGGTaGGACTGGCGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASDWVSG*DWREDP
Trigger: GGGGTCTTCCCGCCAGTCCCACCCACTTACCCAGTC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGACCCCTGCTACCCGATaGGCTACCAGCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRTPATR*ATSPSR
Trigger: CCTGGAAGGGCTGGTAGCCCATCGGGTAGCAGGGGT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAACCCCTGCTACCCGATaGGCTACCAGCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGTPATR*ATSPSR
Trigger: CCTGGAAGGGCTGGTAGCCCATCGGGTAGCAGGGGT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCCTCCGGAGTGGGCCTaGGGGCTCTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPPPEWA*GLCRLP
Trigger: AGGCAGCCTGCAGAGCCCCCAGGCCCACTCCGGAGG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPCLGQT*RRARHT
Trigger: AGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPCLGQT*RRARHT
Trigger: AGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGCTGGATCAGTCTTCTaGCAACACCTGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLAGSVF*QHLWGA
Trigger: TGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGACAAAGGAGCCCCCTaGGGTCCCGTTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRDKGAP*GPVPQG
Trigger: CCCCTGAGGAACGGGACCCCAGGGGGCTCCTTTGTC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPGVRGP*SLLTTD
Trigger: ATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTGGTCAGCACTGGCTaGAATGTTGCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLVSTG*NVAVVQ
Trigger: CTGCACTACAGCAACATTTCAGCCAGTGCTGACCAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQWDLSC*ARYMAP
Trigger: AGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGCCCCACCATTGACGTaGACCTGGGCTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGAPPLT*TWAGTM
Trigger: CATTGTCCCAGCCCAGGTTCACGTCAATGGTGGGGC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACGAATGGGGGCCGAGTaGCTGCTGTGGACAGGAATC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGRMGAE*LLWTGI
Trigger: GATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGKSGSV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPKSGSV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCTTTCTTGCCCTGCTaGGTGATGGTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPFLPC*VMVGGG
Trigger: ACCCCCTCCAACCATCACTCAGCAGGGCAAGAAAGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCTTGGAGACGAAGTTaGCGATGGCAGACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPWRRS*RWQTQA
Trigger: AGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCTTGGAGACGAAGTTaGCGATGGCAGACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPWRRS*RWQTQA
Trigger: AGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLDIVGV*IEPGVH
Trigger: ATGGACACCTGGCTCAATGCAGACCCCCACAATGTC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATGTCTCCCGCTCAGATaGCAGGGCCCCACCATTGAC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGCLPLR*QGPTID
Trigger: GTCAATGGTGGGGCCCTGGCATCTGAGCGGGAGACA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRLLLGR*PWELWE
Trigger: CTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLSSRP*HRCPRH
Trigger: GTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTGATAACTCAGTGCTaGAGGGCTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPLITQC*RARLPQ
Trigger: TTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASGCCSC*HQQGQA
Trigger: CGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTCTGTGGTGCTGCCCTaGTTCCGGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRSVVLP*FRATKP
Trigger: TGGCTTCGTGGCCCGGAAGCAGGGCAGCACCACAGA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCGTTGTCTGTGGTGCTaGCCTGCTTCCGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRRCLWC*PASGPR
Trigger: TCGTGGCCCGGAAGCAGGGCAGCACCACAGACAACG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPFTLKW*VLGASR
Trigger: CCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACTCCTCTGGGATGGCTaGCCAATGGGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRLLWDG*PMGTIL
Trigger: CAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCTCCTCTGGGATGGCTaGCCAATGGGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPLLWDG*PMGTIL
Trigger: CAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCATATCTCCTCTGGGATaGCTGGCCAATGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLISPLG*LANGHD
Trigger: ATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATAT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPSSGP*VCPTTS
Trigger: AGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGRVCST*LGVADR
Trigger: CCTGTCAGCCACTCCCAACCACGTGGAACACACCCT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCACTCTGCCCGTCCTaGATGGGCAGCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPLCPS*MGSSSS
Trigger: AGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTGGGGCTCCACATCTaGAAAGGACTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLGLHI*KGLGSE
Trigger: TTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRGSCGG*LQVQHQ
Trigger: TTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGACCCCAAGAGGGGCTaGGAAGAGAGTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRDPKRG*EESGEA
Trigger: GGCTTCTCCACTCTCTTCCCAGCCCCTCTTGGGGTC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTAAGTGGGTGGGACTaGCGGGAAGACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQVSGWD*REDPKR
Trigger: CCTCTTGGGGTCTTCCCGCCAGTCCCACCCACTTAC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTAAGTGGGTGGGACTaGCGGGAAGACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVSGWD*REDPKR
Trigger: CCTCTTGGGGTCTTCCCGCCAGTCCCACCCACTTAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTACCAGGGAGAGAGGCTaGGGGCTCCTGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSTRERG*GLLRPR
Trigger: GCGGGGCCTCAGGAGCCCCCAGCCTCTCTCCCTGGT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCCTCCGGAGTGGGCCTaGGGGCTCTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILPPEWA*GLCRLP
Trigger: AGGCAGCCTGCAGAGCCCCCAGGCCCACTCCGGAGG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCATACTGTCCATCACTaGCTGCCCGCCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASHTVHH*LPASGV
Trigger: CACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCATACTGTCCATCACTaGCTGCCCGCCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRHTVHH*LPASGV
Trigger: CACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGTGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRCLGQT*RRARHT
Trigger: AGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACA...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASCLGQT*RRARHT
Trigger: AGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCCCTCGTCTTCCTCTaGCTGGATCAGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPLVFL*LDQSSG
Trigger: GCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGGVRGP*SLLTTD
Trigger: ATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGATTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRLPGQC*SSVLRG
Trigger: ACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAA...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGCTTCAGCAGGTCAGTaGTTGAGTTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPASAGQ*LSWQGL
Trigger: CAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAATGGCAGACGCAGGCTaGTTGGGGTCAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGMADAG*LGSSSA
Trigger: CGCAGAGCTTGACCCCAACCAGCCTGCGTCTGCCAT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGALVQW*YRCWPG
Trigger: GCCAGGCCAGCATCTGTATCACCATTGAACCAGGGC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCAGGGCCCCACCATTaGCGTGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPGPHH*REPGLG
Trigger: TCCCAGCCCAGGTTCACGTCAATGGTGGGGCCCTGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCTGCTGCTGTTGCCATaGATTCAGACCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGLLLLP*IQTPLH
Trigger: GTGCAGAGGGGTCTGAATTCATGGCAACAGCAGCAG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAACACTCTGGGACTTATaGAGAGGGGCAGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQTLWDL*RGAAAE
Trigger: CTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCACACTCTGGGACTTATaGAGAGGGGCAGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASTLWDL*RGAAAE
Trigger: CTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGCTGGGGCTGAGCGATaGGACCAGGGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPAGAER*DQGERL
Trigger: CAGCCTCTCTCCCTGGTCTCATCGCTCAGCCCCAGC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTGCCTCTCCCGAGCCTaGACCCCTGCTACCCGATGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLCLSRA*TPATRW
Trigger: CCATCGGGTAGCAGGGGTTCAGGCTCGGGAGAGGCA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAAGTGCTGTCAGCACTaGGGATGGGGCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRKCCQH*GWGCLW
Trigger: CCACAAGCAGCCCCATCCTCAGTGCTGACAGCACTT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAAGTGCTGTCAGCACTaGGGATGGGGCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQKCCQH*GWGCLW
Trigger: CCACAAGCAGCCCCATCCTCAGTGCTGACAGCACTT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGTCACTGCTCACCACTaGTGGGAAACTGCCCACGGA +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRVTAHH*WETAHG
Trigger: TCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGAC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGTCACTGCTCACCACTaGTGGGAAACTGCCCACGGA +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASVTAHH*WETAHG
Trigger: TCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGAC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTGGCCTGTGGCCCGGTaGGTGACTCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRWPVAR*VTPYPQ
Trigger: CTGTGGATATGGAGTCACTCACCGGGCCACAGGCCA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRAETLK*TMVAAG
Trigger: ACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGGTGGGTGGGGCTGCTaGTGTTGCCATGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPGGWGC*CCHEFR
Trigger: TCTGAATTCATGGCAACAGCAGCAGCCCCACCCACC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGGTGGGTGGGGCTGCTaGTGTTGCCATGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRGGWGC*CCHEFR
Trigger: TCTGAATTCATGGCAACAGCAGCAGCCCCACCCACC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLSITG*PPPEWA
Trigger: GGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSLSSRP*HRCPRH
Trigger: GTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGGTGTGGGGCTCCCCTaGCGGAAGGCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLGVGLP*RKAAES
Trigger: AGACTCAGCAGCCTTCCGGCAGGGGAGCCCCACACC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTAAGGGGCAGCCACCTTaGCCTGGCATTTCCGATGAC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASKGQPP*PGISDD
Trigger: GTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCTT...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTTGGAGAAACTCTCATaGAGCCGCCCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPLEKLS*SRPPPG
Trigger: ACCTGGAGGAGGGCGGCTCCATGAGAGTTTCTCCAA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAACCGGTCCAGAGCCTaGTCAGCACTGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGNRSRA*SALAEM
Trigger: CATTTCAGCCAGTGCTGACCAGGCTCTGGACCGGTT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPGMAGQ*ARSCPH
Trigger: ATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCCCCAAGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPPSHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACTTGGGGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCCCACGTGGTTGGGAGTaGCTGACAGGGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAPRGWE*LTGQAV
Trigger: CACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGG...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGTGTGTTCCACGTGGTTaGGAGTGGCTGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRCVPRG*EWLTGQ
Trigger: CTGCCCTGTCAGCCACTCCCAACCACGTGGAACACA...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTGGGCTGGGACAATGTaGCGGCCAGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLWAGTM*RPGEGT
Trigger: TGTGCCCTCCCCTGGCCGCCACATTGTCCCAGCCCA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGWGQGL*VATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGQAIGQ*GQGLWV
Trigger: TACCCAGAGACCCTGTCCCCACTGACCAATGGCCTG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGTTTGTCCAGGCCATTaGTCAGTGGGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPVCPGH*SVGTGS
Trigger: AGACCCTGTCCCCACTGACCAATGGCCTGGACAAAC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCCCACGGGTTGGAGCTTaGGGCAGCTGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAPRVGA*GSWGST
Trigger: TGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGG...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCACTACCCCCACGGGTTaGAGCTTGGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPTTPTG*SLGQLG
Trigger: CCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGACTACCCCCACGGGTTaGAGCTTGGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLTTPTG*SLGQLG
Trigger: CCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGACAAAGGAGCCCCCTaGGGTCCCGTTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLDKGAP*GPVPQG
Trigger: CCCCTGAGGAACGGGACCCCAGGGGGCTCCTTTGTC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQAWHFR*QEKLQT
Trigger: AGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCTGGTCAGCACTGGCTaGAATGTTGCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGLVSTG*NVAVVQ
Trigger: CTGCACTACAGCAACATTTCAGCCAGTGCTGACCAG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCCTCACGATGCCCACTaGAGTTGTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASPHDAH*SCHRSP
Trigger: GGGACTCCTATGACAACTTCAGTGGGCATCGTGAGG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCTCACGATGCCCACTaGAGTTGTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPHDAH*SCHRSP
Trigger: GGGACTCCTATGACAACTTCAGTGGGCATCGTGAGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCCTCACGATGCCCACTaGAGTTGTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASPHDAH*SCHRSP
Trigger: GGGACTCCTATGACAACTTCAGTGGGCATCGTGAGG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCTGCTGCTGTTGCCATaGATTCAGACCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRLLLLP*IQTPLH
Trigger: GTGCAGAGGGGTCTGAATTCATGGCAACAGCAGCAG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQYGGLC*QLGARL
Trigger: AAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCAGCATCAACATATTaGGGGTTTCGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPASTY*GFRWTA
Trigger: AGCAGTCCATCGAAACCCTCAATATGTTGATGCTGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGGCCCCGCAGAGCTATaGGGGCTTGGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAGPAEL*GLGRKV
Trigger: CACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGCCTCTCCCGAGCCTaGACCCCTGCTACCCGATGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILCLSRA*TPATRW
Trigger: CCATCGGGTAGCAGGGGTTCAGGCTCGGGAGAGGCA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGAAGTGCTGTCAGCACTaGGGATGGGGCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRKCCQH*GWGCLW
Trigger: CCACAAGCAGCCCCATCCTCAGTGCTGACAGCACTT...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGAETLK*TMVAAG
Trigger: ACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQAETLK*TMVAAG
Trigger: ACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCTTCACGGAGGTTGCTaGGGAAGTTCTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGLHGGC*GSSPHW
Trigger: CCAATGAGGAGAACTTCCGCAGCAACCTCCGTGAAG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCACTTCACGGAGGTTaGTGCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPLHGG*CGSSPH
Trigger: ATGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATCCAGGACCTTAGCATaGAGCTTGGTGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPSRTLA*SLVMSG
Trigger: GCCTGACATCACCAAGCTGCATGCTAAGGTCCTGGA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATGGCCTTACAGACACTaGATATCTTCTCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPWPYRH*ISSPGP
Trigger: CGGCCCTGGAGAAGATATGCAGTGTCTGTAAGGCCA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGATGGCCTTACAGACACTaGATATCTTCTCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRWPYRH*ISSPGP
Trigger: CGGCCCTGGAGAAGATATGCAGTGTCTGTAAGGCCA...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGAATTCAGACCCCTCTaGACAGCCTCTCGGCTACTA +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPEFRPL*TASRLL
Trigger: TAGTAGCCGAGAGGCTGTGCAGAGGGGTCTGAATTC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGGTGGGTGGGGCTGCTaGTGTTGCCATGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASGGWGC*CCHEFR
Trigger: TCTGAATTCATGGCAACAGCAGCAGCCCCACCCACC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGGGGATCTCTCCTaGTGGCGGGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILSGDLS*WRGGGW
Trigger: CCACCCACCTCCCCGCCAGCAGGAGAGATCCCCACT...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLLLGR*PWELWE
Trigger: CTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGACTGCTCGATCTCCTaGTGGGACGCTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPDCSIS*WDAALG
Trigger: CCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASRVSMD*SISCWD
Trigger: GTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQRVSMD*SISCWD
Trigger: GTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCGAGCCTGAACCCCTaGTACCCGATGGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPSLNP*YPMGYQ
Trigger: CTGGTAGCCCATCGGGTAGCAGGGGTTCAGGCTCGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQLSITG*PPPEWA
Trigger: GGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGTGCAGCAAGATGTCTaGTGGGTTGTGGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRVQQDV*WVVGFQ
Trigger: CTGAAACCCCACAACCCAGCAGACATCTTGCTGCAC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCCAGAGGCACTGCTTTaGCGGGACAGTGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASPEALL*RDSVGL
Trigger: AAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACCAGAGGCACTGCTTTaGCGGGACAGTGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGPEALL*RDSVGL
Trigger: AAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCAGAGGCACTGCTTTaGCGGGACAGTGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPEALL*RDSVGL
Trigger: AAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTGAGGCACTTTCTGATCGAGAC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATACAGATGCTGGCCTaGCTGTCTCCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPIQMLA*LSPGML
Trigger: CAACATCCCTGGAGACAGCCAGGCCAGCATCTGTAT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAATACAGATGCTGGCCTaGCTGTCTCCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPIQMLA*LSPGML
Trigger: CAACATCCCTGGAGACAGCCAGGCCAGCATCTGTAT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGACAACCCCCAAGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGTTPKS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACTTGGGGGTTGT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRPSSSP*RTGSHP
Trigger: TGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPSSSP*RTGSHP
Trigger: TGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPSSSP*RTGSHP
Trigger: TGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGCTGAGCCCGGTACATaGCGCCTTGCTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGAEPGT*RLAFLY
Trigger: ATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCCACTCTGCCCGTCCTaGATGGGCAGCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRPLCPS*MGSSSS
Trigger: AGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASWGQGL*VATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQWGQGL*VATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCCACGGGTTGGAGCTTaGGGCAGCTGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSPRVGA*GSWGST
Trigger: TGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQGSCGG*LQVQHQ
Trigger: TTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCC...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTTTGGATGGAAACTCTaGTTGGATCCAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLFGWKL*LDPAGC
Trigger: GCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCACCAGGGAGAGAGGCTaGGGGCTCCTGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSTRERG*GLLRPR
Trigger: GCGGGGCCTCAGGAGCCCCCAGCCTCTCTCCCTGGT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTGTAGTTTCCTTTGGTaGGAGCTGGGGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGCSFLW*ELGLSD
Trigger: ATCGCTCAGCCCCAGCTCCCACCAAAGGAAACTACA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCACCCCTGCTACCCGATaGGCTACCAGCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPTPATR*ATSPSR
Trigger: CCTGGAAGGGCTGGTAGCCCATCGGGTAGCAGGGGT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPFWQHL*GAARCL
Trigger: CAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRALYCG*PWLSGE
Trigger: TTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGALYCG*PWLSGE
Trigger: TTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSVSAQA*ASRSGD
Trigger: GTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACAC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGCATGCCGGTCCAAGCTaGGGCTTCCAGGAACCACGG +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQHAGPS*GFQEPR
Trigger: CCGTGGTTCCTGGAAGCCCCAGCTTGGACCGGCATG...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRLPGQC*SSVLRG
Trigger: ACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCAAGGCTCCTGGCTCCTaGTCCTTTAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASKAPGS*SFRSAM
Trigger: CATCGCACTCCTAAAGGACCAGGAGCCAGGAGCCTT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTAAGGCTCCTGGCTCCTaGTCCTTTAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASKAPGS*SFRSAM
Trigger: CATCGCACTCCTAAAGGACCAGGAGCCAGGAGCCTT...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTCTGTTCAGAGAGGTTaGATAGCAGGTAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPSVQRG*IAGSCP
Trigger: GGGGCAACTACCTGCTATTCAACCTCTCTGAACAGA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCATCTGTTCAGAGAGGTTaGATAGCAGGTAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPSVQRG*IAGSCP
Trigger: GGGGCAACTACCTGCTATTCAACCTCTCTGAACAGA...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPCGGLH*ARCPWP
Trigger: AGGCCATGGACACCTGGCTCAATGCAGACCCCCACA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGTGGTTGGGAGTGGCTaGCAGGGCAGGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQVVGSG*QGRPCS
Trigger: ACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCAC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGCCCCACCATTGACGTaGACCTGGGCTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLAPPLT*TWAGTM
Trigger: CATTGTCCCAGCCCAGGTTCACGTCAATGGTGGGGC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGCCCCACCATTGACGTaGACCTGGGCTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPAPPLT*TWAGTM
Trigger: CATTGTCCCAGCCCAGGTTCACGTCAATGGTGGGGC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECYGGLC*QLGARL
Trigger: AAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCTGATAATCGTAAGGTaGATAAGGCCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLLIIVR*IRPARR
Trigger: TCTTCTGGCAGGCCTTATTCACCTTACGATTATCAG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGGGCTGAGCGATaGGACCAGGGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSAGAER*DQGERL
Trigger: CAGCCTCTCTCCCTGGTCTCATCGCTCAGCCCCAGC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTTGCCTCTCCCGAGCCTaGACCCCTGCTACCCGATGG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCCLSRA*TPATRW
Trigger: CCATCGGGTAGCAGGGGTTCAGGCTCGGGAGAGGCA...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRAETLK*TMVAAG
Trigger: ACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTGGCCTGCCGGCAGATaGCACAGGGCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAWPAGR*HRASPS
Trigger: AGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACCACTTCACGGAGGTTaGTGCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGPLHGG*CGSSPH
Trigger: ATGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATGGCCTTACAGACACTaGATATCTTCTCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGWPYRH*ISSPGP
Trigger: CGGCCCTGGAGAAGATATGCAGTGTCTGTAAGGCCA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGGCCTTACAGACACTaGATATCTTCTCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQWPYRH*ISSPGP
Trigger: CGGCCCTGGAGAAGATATGCAGTGTCTGTAAGGCCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASDIVGV*IEPGVH
Trigger: ATGGACACCTGGCTCAATGCAGACCCCCACAATGTC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGCACAGGTGTGGAACTaGACTCGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGAGTGCAGTTCCACACCTGTGC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCACAGGTGTGGAACTaGACTCGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGAGTGCAGTTCCACACCTGTGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACGGTACATGGCGCCTTaGTTTTCTCTATCCACACCA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPRYMAP*FSLSTP
Trigger: TGGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCGGTACATGGCGCCTTaGTTTTCTCTATCCACACCA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGRYMAP*FSLSTP
Trigger: TGGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTGGGCACTGGTCACTTaGTGTGACCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPWALVT*CDQAGW
Trigger: CCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILLLLGR*PWELWE
Trigger: CTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGACTGCTCGATCTCCTaGTGGGACGCTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILDCSIS*WDAALG
Trigger: CCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGACTGCTCGATCTCCTaGTGGGACGCTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSDCSIS*WDAALG
Trigger: CCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCCGAGCCTGAACCCCTaGTACCCGATGGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILPSLNP*YPMGYQ
Trigger: CTGGTAGCCCATCGGGTAGCAGGGGTTCAGGCTCGG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEHCVAG*LGRSPP
Trigger: TGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTGCAGCAAGATGTCTaGTGGGTTGTGGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVQQDV*WVVGFQ
Trigger: CTGAAACCCCACAACCCAGCAGACATCTTGCTGCAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLGCCSC*HQQGQA
Trigger: CGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGGTGTGGGGCTCCCCTaGCGGAAGGCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSGVGLP*RKAAES
Trigger: AGACTCAGCAGCCTTCCGGCAGGGGAGCCCCACACC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTGAGGCACTTTCTGATCGAGAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTGAGGCACTTTCTGATCGAGAC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPRTTTL*GSALSQ
Trigger: CTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRRTTTL*GSALSQ
Trigger: CTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCT...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCATATCTCCTCTGGGATaGCTGGCCAATGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASISPLG*LANGHD
Trigger: ATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATAT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGGATGGCACAGGTGTaGAACTGCACTCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQWMAQV*NCTRKM
Trigger: CATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPPSSGP*VCPTTS
Trigger: AGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECGSCGG*LQVQHQ
Trigger: TTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGTAAGTGGGTGGGACTaGCGGGAAGACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPVSGWD*REDPKR
Trigger: CCTCTTGGGGTCTTCCCGCCAGTCCCACCCACTTAC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGDGNSG*IQLDAA
Trigger: AGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCGGCTTGGAAGGAAGGTaGAAGAGGCTGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPGLEGR*KRLDFL
Trigger: CAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCC...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATGTAGTTTCCTTTGGTaGGAGCTGGGGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGCSFLW*ELGLSD
Trigger: ATCGCTCAGCCCCAGCTCCCACCAAAGGAAACTACA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGTAGTTTCCTTTGGTaGGAGCTGGGGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQCSFLW*ELGLSD
Trigger: ATCGCTCAGCCCCAGCTCCCACCAAAGGAAACTACA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCACCCCTGCTACCCGATaGGCTACCAGCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSTPATR*ATSPSR
Trigger: CCTGGAAGGGCTGGTAGCCCATCGGGTAGCAGGGGT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCATACTGTCCATCACTaGCTGCCCGCCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPHTVHH*LPASGV
Trigger: CACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGTGGCCTCCGGAGACTaGTTTTCATACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPVASGD*FSYCPS
Trigger: TGATGGACAGTATGAAAACCAGTCTCCGGAGGCCAC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGTGGCCTCCGGAGACTaGTTTTCATACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRVASGD*FSYCPS
Trigger: TGATGGACAGTATGAAAACCAGTCTCCGGAGGCCAC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSVWRAA*GGPLHL
Trigger: GAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACAC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGCCGATGGCTCAAACTaGGACTACCAGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPADGSN*DYQGQP
Trigger: TGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQVSAQA*ASRSGD
Trigger: GTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACAC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCATGCCGGTCCAAGCTaGGGCTTCCAGGAACCACGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSHAGPS*GFQEPR
Trigger: CCGTGGTTCCTGGAAGCCCCAGCTTGGACCGGCATG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCATGCCGGTCCAAGCTaGGGCTTCCAGGAACCACGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILHAGPS*GFQEPR
Trigger: CCGTGGTTCCTGGAAGCCCCAGCTTGGACCGGCATG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTGCCTCACCAGCTCATaGGTCATGTCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPCLTSS*VMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCATGGCAGACGCAGGCTaGTTGGGGTCAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAMADAG*LGSSSA
Trigger: CGCAGAGCTTGACCCCAACCAGCCTGCGTCTGCCAT...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTTGGACTTCAACATCTaGGCCACTTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASLDFNI*ATSRRL
Trigger: CAACCTCCGTGAAGTGGCTCAGATGTTGAAGTCCAA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATCTGTTCAGAGAGGTTaGATAGCAGGTAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQSVQRG*IAGSCP
Trigger: GGGGCAACTACCTGCTATTCAACCTCTCTGAACAGA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGCTTGTTGTTCATTTTaGTGGAGCCAGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRACCSF*WSQRVG
Trigger: GCCTACTCTCTGGCTCCATCAAAATGAACAACAAGC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGAAATCGATCATCTTTaGAGGCCTCATCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLEIDHL*RPHPDL
Trigger: AAGATCTGGATGAGGCCTTCAAAGATGATCGATTTC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCAGCTCTTTCTTCTCCTaGGGACTCAGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPSSFFS*GLRAAG
Trigger: CCCTGCTGCCCTGAGTCCTCAGGAGAAGAAAGAGCT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGAGCTCTTTCTTCTCCTaGGGACTCAGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQSSFFS*GLRAAG
Trigger: CCCTGCTGCCCTGAGTCCTCAGGAGAAGAAAGAGCT...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGACACTCTGGGACTTATaGAGAGGGGCAGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLTLWDL*RGAAAE
Trigger: CTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGCTGGGGCTGAGCGATaGGACCAGGGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSAGAER*DQGERL
Trigger: CAGCCTCTCTCCCTGGTCTCATCGCTCAGCCCCAGC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCAAGTGCTGTCAGCACTaGGGATGGGGCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAKCCQH*GWGCLW
Trigger: CCACAAGCAGCCCCATCCTCAGTGCTGACAGCACTT...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGGCCTGTGGCCCGGTaGGTGACTCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILWPVAR*VTPYPQ
Trigger: CTGTGGATATGGAGTCACTCACCGGGCCACAGGCCA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGGCCTGCCGGCAGATaGCACAGGGCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILWPAGR*HRASPS
Trigger: AGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRDIVGV*IEPGVH
Trigger: ATGGACACCTGGCTCAATGCAGACCCCCACAATGTC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGTCTCCCGCTCAGATaGCAGGGCCCCACCATTGAC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILCLPLR*QGPTID
Trigger: GTCAATGGTGGGGCCCTGGCATCTGAGCGGGAGACA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGGCACTGGTCACTTaGTGTGACCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECWALVT*CDQAGW
Trigger: CCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTTGGGCACTGGTCACTTaGTGTGACCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSWALVT*CDQAGW
Trigger: CCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCA...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGACTGCTCGATCTCCTaGTGGGACGCTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSDCSIS*WDAALG
Trigger: CCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSMKRGS*GGWLQV
Trigger: GACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCAT...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCCGAGCCTGAACCCCTaGTACCCGATGGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCPSLNP*YPMGYQ
Trigger: CTGGTAGCCCATCGGGTAGCAGGGGTTCAGGCTCGG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSHCVAG*LGRSPP
Trigger: TGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGGGGACCCTGGTCACTaGTCACCACTGATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLGDPGH*SPLMGN
Trigger: GTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCTGCAGGGCTCGGCTaGCCCAAGCTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSAAGLG*PKLPER
Trigger: CCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGGTGTGGGGCTCCCCTaGCGGAAGGCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSGVGLP*RKAAES
Trigger: AGACTCAGCAGCCTTCCGGCAGGGGAGCCCCACACC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASLQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTGCCTTCACCTTGAAGTaGTGGGTCTTGGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSAFTLK*WVLGAS
Trigger: GGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGC...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGAAGGGGCAGCCACCTTaGCCTGGCATTTCCGATGAC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLKGQPP*PGISDD
Trigger: GTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCTT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGCACCAGTTCATGGCTaGACGGAGGAACGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILAPVHG*TEERKG
Trigger: CCCCTTGCGTTCCTCCGTCCAGCCATGAACTGGTGC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQRTTTL*GSALSQ
Trigger: CTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGATGTACACAGGTTGCATaGCTTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWRCTQVA*LGRCGE
Trigger: TTCTCCGCATCTACCAAGCCATGCAACCTGTGTACA...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAAGTCTACAGATACGCTaGGCCCATTCTCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGSLQIR*AHSPGV
Trigger: AACACCTGGAGAATGGGCCCAGCGTATCTGTAGACT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGTCTACAGATACGCTaGGCCCATTCTCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRSLQIR*AHSPGV
Trigger: AACACCTGGAGAATGGGCCCAGCGTATCTGTAGACT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTGTGTTCCACGTGGTTaGGAGTGGCTGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPACVPRG*EWLTGQ
Trigger: CTGCCCTGTCAGCCACTCCCAACCACGTGGAACACA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLQAIGQ*GQGLWV
Trigger: TACCCAGAGACCCTGTCCCCACTGACCAATGGCCTG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCCACGGGTTGGAGCTTaGGGCAGCTGGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSPRVGA*GSWGST
Trigger: TGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCTGGTTGGATCCAGCTaGATGCAGCTGATAATCGTA +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGLVGSS*MQLIIV
Trigger: TACGATTATCAGCTGCATCCAGCTGGATCCAACCAG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRDGNSG*IQLDAA
Trigger: AGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGGCTTGGAAGGAAGGTaGAAGAGGCTGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQGLEGR*KRLDFL
Trigger: CAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGACCAGGGAGAGAGGCTaGGGGCTCCTGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLTRERG*GLLRPR
Trigger: GCGGGGCCTCAGGAGCCCCCAGCCTCTCTCCCTGGT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTGTAGTTTCCTTTGGTaGGAGCTGGGGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRCSFLW*ELGLSD
Trigger: ATCGCTCAGCCCCAGCTCCCACCAAAGGAAACTACA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCTCCGGAGTGGGCCTaGGGGCTCTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPPEWA*GLCRLP
Trigger: AGGCAGCCTGCAGAGCCCCCAGGCCCACTCCGGAGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCTCCGGAGTGGGCCTaGGGGCTCTGCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPPEWA*GLCRLP
Trigger: AGGCAGCCTGCAGAGCCCCCAGGCCCACTCCGGAGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTGGCCTCCGGAGACTaGTTTTCATACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVASGD*FSYCPS
Trigger: TGATGGACAGTATGAAAACCAGTCTCCGGAGGCCAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSGVRGP*SLLTTD
Trigger: ATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRKTRAR*SVGTHC
Trigger: ACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLPGQC*SSVLRG
Trigger: ACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGCTTCAGCAGGTCAGTaGTTGAGTTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLASAGQ*LSWQGL
Trigger: CAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCATGGCAGACGCAGGCTaGTTGGGGTCAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECMADAG*LGSSSA
Trigger: CGCAGAGCTTGACCCCAACCAGCCTGCGTCTGCCAT...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAAWHFR*QEKLQT
Trigger: AGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQCGGLH*ARCPWP
Trigger: AGGCCATGGACACCTGGCTCAATGCAGACCCCCACA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILALVQW*YRCWPG
Trigger: GCCAGGCCAGCATCTGTATCACCATTGAACCAGGGC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQWDLSC*ARYMAP
Trigger: AGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACTGATAATCGTAAGGTaGATAAGGCCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPLIIVR*IRPARR
Trigger: TCTTCTGGCAGGCCTTATTCACCTTACGATTATCAG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGTCACTGCTCACCACTaGTGGGAAACTGCCCACGGA +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILVTAHH*WETAHG
Trigger: TCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGAC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGTCACTGCTCACCACTaGTGGGAAACTGCCCACGGA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECVTAHH*WETAHG
Trigger: TCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGAC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTTTCTGGAGAAGAGCTaGATGGTTGGAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASFLEKS*MVGGSS
Trigger: ACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGACCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTGGCCTGTGGCCCGGTaGGTGACTCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSWPVAR*VTPYPQ
Trigger: CTGTGGATATGGAGTCACTCACCGGGCCACAGGCCA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCCTTGGAGACGAAGTTaGCGATGGCAGACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSPWRRS*RWQTQA
Trigger: AGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGATGACAGGAGAAGCTaGAGACTTTGCAAACACAGC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASDDRRS*RLCKHS
Trigger: GCTGTGTTTGCAAAGTCTGCAGCTTCTCCTGTCATC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGATAGAATCTCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGIESLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTAT...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTCTCCAGGTGTTCCATaGCTTGAATTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPSPGVP*LEFSLV
Trigger: GACCAGAGAAAATTCAAGGCATGGAACACCTGGAGA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCTGGAGGCTGTGGAGTTaGCAGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSWRLWS*QSRCSQ
Trigger: CTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCA...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGAGGCTGTGGAGTTaGCAGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECWRLWS*QSRCSQ
Trigger: CTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTGTCTCCCGCTCAGATaGCAGGGCCCCACCATTGAC +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCECLPLR*QGPTID
Trigger: GTCAATGGTGGGGCCCTGGCATCTGAGCGGGAGACA...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTGGGCACTGGTCACTTaGTGTGACCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSWALVT*CDQAGW
Trigger: CCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTGGGGCTGCTGCTGTTaGCATGAATTCAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPWGCCC*HEFRPL
Trigger: GAGGGGTCTGAATTCATGGCAACAGCAGCAGCCCCA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGGTGGGTGGGGCTGCTaGTGTTGCCATGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPGGWGC*CCHEFR
Trigger: TCTGAATTCATGGCAACAGCAGCAGCCCCACCCACC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCCGAGCCTGAACCCCTaGTACCCGATGGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSPSLNP*YPMGYQ
Trigger: CTGGTAGCCCATCGGGTAGCAGGGGTTCAGGCTCGG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSLSITG*PPPEWA
Trigger: GGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSLSSRP*HRCPRH
Trigger: GTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTGATAACTCAGTGCTaGAGGGCTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLITQC*RARLPQ
Trigger: TTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCGCCSC*HQQGQA
Trigger: CGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCC...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCAGAGGCACTGCTTTaGCGGGACAGTGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPEALL*RDSVGL
Trigger: AAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGGCCTTCACCTTGAAGTaGTGGGTCTTGGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEAFTLK*WVLGAS
Trigger: GGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGC...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTTGGAGAAACTCTCATaGAGCCGCCCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQLEKLS*SRPPPG
Trigger: ACCTGGAGGAGGGCGGCTCCATGAGAGTTTCTCCAA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTTGGAGAAACTCTCATaGAGCCGCCCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLEKLS*SRPPPG
Trigger: ACCTGGAGGAGGGCGGCTCCATGAGAGTTTCTCCAA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTGCACATATCTCCTCTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTGCACATATCTCCTCTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPACTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPSSGP*VCPTTS
Trigger: AGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCCACGTGGTTGGGAGTaGCTGACAGGGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIPRGWE*LTGQAV
Trigger: CACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSRVCST*LGVADR
Trigger: CCTGTCAGCCACTCCCAACCACGTGGAACACACCCT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTGGGCTGGGACAATGTaGCGGCCAGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIWAGTM*RPGEGT
Trigger: TGTGCCCTCCCCTGGCCGCCACATTGTCCCAGCCCA...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTGGGCTGGGACAATGTaGCGGCCAGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRWAGTM*RPGEGT
Trigger: TGTGCCCTCCCCTGGCCGCCACATTGTCCCAGCCCA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCCACTCTGCCCGTCCTaGATGGGCAGCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSPLCPS*MGSSSS
Trigger: AGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAACATCTGGAAAGGACTaGGATCTGAATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPTSGKD*DLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCAGAGAATGCCCACTaGGGATATAGCCAGATCGGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPENAH*GYSQIG
Trigger: CCCGATCTGGCTATATCCCCAGTGGGCATTCTCTGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTTTGGATGGAAACTCTaGTTGGATCCAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASFGWKL*LDPAGC
Trigger: GCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGTTTGGATGGAAACTCTaGTTGGATCCAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRFGWKL*LDPAGC
Trigger: GCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAA...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTACCAGGGAGAGAGGCTaGGGGCTCCTGAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCTRERG*GLLRPR
Trigger: GCGGGGCCTCAGGAGCCCCCAGCCTCTCTCCCTGGT...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCATACTGTCCATCACTaGCTGCCCGCCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCHTVHH*LPASGV
Trigger: CACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGTGGCCTCCGGAGACTaGTTTTCATACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRVASGD*FSYCPS
Trigger: TGATGGACAGTATGAAAACCAGTCTCCGGAGGCCAC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCAGCAAGATGTCTGCTaGGTTGTGGGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLQQDVC*VVGFQA
Trigger: GGCCTGAAACCCCACAACCCAGCAGACATCTTGCTG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGVRGP*SLLTTD
Trigger: ATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGCCGATGGCTCAAACTaGGACTACCAGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQADGSN*DYQGQP
Trigger: TGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSLPGQC*SSVLRG
Trigger: ACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAA...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTCTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSILVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CAA 72 bp GACCCAAGGCATGGAGGCAGGAGAGGGCTGAACCCCTaGGATGGATCTCCCCAAGATCTGAAGCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DPRHGGRRGLNP*DGSPQDLKLGK
Trigger: CTTTCCCAGCTTCAGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSALVQW*YRCWPG
Trigger: GCCAGGCCAGCATCTGTATCACCATTGAACCAGGGC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGAAATCGATCATCTTTaGAGGCCTCATCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: PCGSASLSEGGGAPASWREIDHL*RPHPDL
Trigger: AAGATCTGGATGAGGCCTTCAAAGATGATCGATTTC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCCTCACGATGCCCACTaGAGTTGTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILPHDAH*SCHRSP
Trigger: GGGACTCCTATGACAACTTCAGTGGGCATCGTGAGG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTAGCTCTTTCTTCTCCTaGGGACTCAGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCSSFFS*GLRAAG
Trigger: CCCTGCTGCCCTGAGTCCTCAGGAGAAGAAAGAGCT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSWDLSC*ARYMAP
Trigger: AGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCAGGGCCCCACCATTaGCGTGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPGPHH*REPGLG
Trigger: TCCCAGCCCAGGTTCACGTCAATGGTGGGGCCCTGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCCAGCATCAACATATTaGGGGTTTCGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRPASTY*GFRWTA
Trigger: AGCAGTCCATCGAAACCCTCAATATGTTGATGCTGG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGCTGGGGCTGAGCGATaGGACCAGGGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSAGAER*DQGERL
Trigger: CAGCCTCTCTCCCTGGTCTCATCGCTCAGCCCCAGC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTCCAGGACCTTAGCATaGAGCTTGGTGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQSRTLA*SLVMSG
Trigger: GCCTGACATCACCAAGCTGCATGCTAAGGTCCTGGA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTGGCCTTACAGACACTaGATATCTTCTCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAWPYRH*ISSPGP
Trigger: CGGCCCTGGAGAAGATATGCAGTGTCTGTAAGGCCA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPADIVGV*IEPGVH
Trigger: ATGGACACCTGGCTCAATGCAGACCCCCACAATGTC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCATAGAATCTCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CVPCGSASLSEGGGAPASIESLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTAT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGCACAGGTGTGGAACTaGACTCGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGAGTGCAGTTCCACACCTGTGC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGGCACAGGTGTGGAACTaGACTCGGAAGATGACGTCT +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQAQVWN*TRKMTS
Trigger: AGACGTCATCTTCCGAGTGCAGTTCCACACCTGTGC...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTGGAGGCTGTGGAGTTaGCAGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEWRLWS*QSRCSQ
Trigger: CTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCA...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTAGTGGGGATCTCTCCTaGTGGCGGGGAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSGDLS*WRGGGW
Trigger: CCACCCACCTCCCCGCCAGCAGGAGAGATCCCCACT...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGGACTGCTCGATCTCCTaGTGGGACGCTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRDCSIS*WDAALG
Trigger: CCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTC...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIMKRGS*GGWLQV
Trigger: GACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCAT...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGHCVAG*LGRSPP
Trigger: TGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGGGACCCTGGTCACTaGTCACCACTGATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGDPGH*SPLMGN
Trigger: GTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCTGATAACTCAGTGCTaGAGGGCTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLITQC*RARLPQ
Trigger: TTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRPDPPR*RPKLGL
Trigger: GAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTCGTTGTCTGTGGTGCTaGCCTGCTTCCGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIRCLWC*PASGPR
Trigger: TCGTGGCCCGGAAGCAGGGCAGCACCACAGACAACG...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCGGTTTCCCTTGTTGTaGAGAACAACGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRRFPLL*RTTTLW
Trigger: CCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGCACATATCTCCTCTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCATACAGATGCTGGCCTaGCTGTCTCCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPIQMLA*LSPGML
Trigger: CAACATCCCTGGAGACAGCCAGGCCAGCATCTGTAT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTGTGTTCCACGTGGTTaGGAGTGGCTGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSCVPRG*EWLTGQ
Trigger: CTGCCCTGTCAGCCACTCCCAACCACGTGGAACACA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTGTGTTCCACGTGGTTaGGAGTGGCTGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCECVPRG*EWLTGQ
Trigger: CTGCCCTGTCAGCCACTCCCAACCACGTGGAACACA...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQRVCST*LGVADR
Trigger: CCTGTCAGCCACTCCCAACCACGTGGAACACACCCT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGCTGAGCCCGGTACATaGCGCCTTGCTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLAEPGT*RLAFLY
Trigger: ATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGC...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCQAIGQ*GQGLWV
Trigger: TACCCAGAGACCCTGTCCCCACTGACCAATGGCCTG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSQAIGQ*GQGLWV
Trigger: TACCCAGAGACCCTGTCCCCACTGACCAATGGCCTG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEQAIGQ*GQGLWV
Trigger: TACCCAGAGACCCTGTCCCCACTGACCAATGGCCTG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGACATCTGGAAAGGACTaGGATCTGAATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRTSGKD*DLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTGGGGCTCCACATCTaGAAAGGACTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLGLHI*KGLGSE
Trigger: TTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTACTACCCCCACGGGTTaGAGCTTGGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGTTPTG*SLGQLG
Trigger: CCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAACTACCCCCACGGGTTaGAGCTTGGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSTTPTG*SLGQLG
Trigger: CCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGT...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGACTGGGTAAGTGGGTaGGACTGGCGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIDWVSG*DWREDP
Trigger: GGGGTCTTCCCGCCAGTCCCACCCACTTACCCAGTC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSVWRAA*GGPLHL
Trigger: GAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACAC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGVWRAA*GGPLHL
Trigger: GAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACAC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSVSAQA*ASRSGD
Trigger: GTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACAC...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACTGGCGAGGGTGAGGTaGCAGGGCTGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLARVR*QGCSGQ
Trigger: CTGGCCTGAGCAGCCCTGCCACCTCACCCTCGCCAG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCLVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLLVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSLVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGTACTTGGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCCAAGTA...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCTCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CAA 72 bp TTCAGCCAAGGCCTAAGTGCAGGGGTGGCCCTAGCTTaGGGTTCTAAGCTCTTCAGGGACCCAAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FSQGLSAGVALA*GSKLFRDPRHG
Trigger: TCCATGCCTTGGGTCCCTGAAGAGCTTAGAACCCAAAGCTAGGGCCACCCCTGCACTTAGGCCTTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTTGGACTTCAACATCTaGGCCACTTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLDFNI*ATSRRL
Trigger: CAACCTCCGTGAAGTGGCTCAGATGTTGAAGTCCAA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTGGTCAGCACTGGCTaGAATGTTGCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLVSTG*NVAVVQ
Trigger: CTGCACTACAGCAACATTTCAGCCAGTGCTGACCAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTGGGGATGCCGTGCATaGTCACATGATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPWGCRA*SHDAET
Trigger: TGTTTCTGCATCATGTGATCATGCACGGCATCCCCA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGAAATCGATCATCTTTaGAGGCCTCATCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGREIDHL*RPHPDL
Trigger: AAGATCTGGATGAGGCCTTCAAAGATGATCGATTTC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRWDLSC*ARYMAP
Trigger: AGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCGAATGGGGGCCGAGTaGCTGCTGTGGACAGGAATC +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIRMGAE*LLWTGI
Trigger: GATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCATACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSYGGLC*QLGARL
Trigger: AAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTA...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSYGGLC*QLGARL
Trigger: AAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGGCCCCGCAGAGCTATaGGGGCTTGGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLGPAEL*GLGRKV
Trigger: CACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTGGCCTGCCGGCAGATaGCACAGGGCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIWPAGR*HRASPS
Trigger: AGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCA...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTTCACGGAGGTTGCTaGGGAAGTTCTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLHGGC*GSSPHW
Trigger: CCAATGAGGAGAACTTCCGCAGCAACCTCCGTGAAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCTCCAGGACCTTAGCATaGAGCTTGGTGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSSRTLA*SLVMSG
Trigger: GCCTGACATCACCAAGCTGCATGCTAAGGTCCTGGA...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTCCAGGACCTTAGCATaGAGCTTGGTGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILSRTLA*SLVMSG
Trigger: GCCTGACATCACCAAGCTGCATGCTAAGGTCCTGGA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACAGGGATGTTGTAAATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQQGCCK*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATTTACAACATCCCTG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCAGGGATGTTGTAAATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASQGCCK*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATTTACAACATCCCTG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGACAAACTCCACTTTaGCATAGTCAGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPRQTPL*HSQEID
Trigger: ATCGATTTCCTGACTATGGCAAAGTGGAGTTTGTCT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTTGTCTCCCGCTCAGATaGCAGGGCCCCACCATTGAC +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVICLPLR*QGPTID
Trigger: GTCAATGGTGGGGCCCTGGCATCTGAGCGGGAGACA...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVMLPPL*PSWMGS
Trigger: GCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCAT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCRVSMD*SISCWD
Trigger: GTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCGAGCCTGAACCCCTaGTACCCGATGGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPSLNP*YPMGYQ
Trigger: CTGGTAGCCCATCGGGTAGCAGGGGTTCAGGCTCGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCTGATAACTCAGTGCTaGAGGGCTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSLITQC*RARLPQ
Trigger: TTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPALQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGGCACCAGTTCATGGCTaGACGGAGGAACGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRAPVHG*TEERKG
Trigger: CCCCTTGCGTTCCTCCGTCCAGCCATGAACTGGTGC...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTATGGGCACCAGTTCATaGCTGGACGGAGGAACGCAA +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCMGTSS*LDGGTQ
Trigger: TTGCGTTCCTCCGTCCAGCCATGAACTGGTGCCCAT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAACCGGTCCAGAGCCTaGTCAGCACTGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQNRSRA*SALAEM
Trigger: CATTTCAGCCAGTGCTGACCAGGCTCTGGACCGGTT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGMAGQ*ARSCPH
Trigger: ATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRLQEQP*FNGDTD
Trigger: ATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGGATGGCACAGGTGTaGAACTGCACTCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILWMAQV*NCTRKM
Trigger: CATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCCCCAAGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPPSHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACTTGGGGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCACAACCCCCAAGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSTTPKS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACTTGGGGGTTGT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGTTTGTCCAGGCCATTaGTCAGTGGGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQVCPGH*SVGTGS
Trigger: AGACCCTGTCCCCACTGACCAATGGCCTGGACAAAC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCTGGGGCTCCACATCTaGAAAGGACTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSLGLHI*KGLGSE
Trigger: TTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGGGCTCCACATCTaGAAAGGACTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSLGLHI*KGLGSE
Trigger: TTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSGSCGG*LQVQHQ
Trigger: TTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCAGAGAATGCCCACTaGGGATATAGCCAGATCGGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPENAH*GYSQIG
Trigger: CCCGATCTGGCTATATCCCCAGTGGGCATTCTCTGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACT +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRCLGQT*RRARHT
Trigger: AGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGATCAGTCTTCTaGCAACACCTGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSAGSVF*QHLWGA
Trigger: TGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSALYCG*PWLSGE
Trigger: TTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQKTRAR*SVGTHC
Trigger: ACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCATGCCGGTCCAAGCTaGGGCTTCCAGGAACCACGG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSHAGPS*GFQEPR
Trigger: CCGTGGTTCCTGGAAGCCCCAGCTTGGACCGGCATG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLRCCSH*PCHWRQ
Trigger: CTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATACTTGGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCCAAGTA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTGCCTCACCAGCTCATaGGTCATGTCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLCLTSS*VMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGCTTCAGCAGGTCAGTaGTTGAGTTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSASAGQ*LSWQGL
Trigger: CAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTTGGACTTCAACATCTaGGCCACTTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLDFNI*ATSRRL
Trigger: CAACCTCCGTGAAGTGGCTCAGATGTTGAAGTCCAA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSCGGLH*ARCPWP
Trigger: AGGCCATGGACACCTGGCTCAATGCAGACCCCCACA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCTGGTCAGCACTGGCTaGAATGTTGCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCLVSTG*NVAVVQ
Trigger: CTGCACTACAGCAACATTTCAGCCAGTGCTGACCAG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCGTGCATGATCACATaGTGCAGAAACAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPCMIT*CRNKGL
Trigger: CAAGCCTTTGTTTCTGCATCATGTGATCATGCACGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGGGATGCCGTGCATaGTCACATGATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECWGCRA*SHDAET
Trigger: TGTTTCTGCATCATGTGATCATGCACGGCATCCCCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIALVQW*YRCWPG
Trigger: GCCAGGCCAGCATCTGTATCACCATTGAACCAGGGC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLWDLSC*ARYMAP
Trigger: AGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCGAATGGGGGCCGAGTaGCTGCTGTGGACAGGAATC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSRMGAE*LLWTGI
Trigger: GATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGGCCCCGCAGAGCTATaGGGGCTTGGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVGPAEL*GLGRKV
Trigger: CACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTTTCTGGAGAAGAGCTaGATGGTTGGAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPFLEKS*MVGGSS
Trigger: ACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTCTTGCCCTGCTGAGTaGTGGTTGGAGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSSCPAE*WLEGVR
Trigger: CCTCACCCCCTCCAACCATCACTCAGCAGGGCAAGA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCCACTTCACGGAGGTTaGTGCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSPLHGG*CGSSPH
Trigger: ATGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTAGACAAACTCCACTTTaGCATAGTCAGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASRQTPL*HSQEID
Trigger: ATCGATTTCCTGACTATGGCAAAGTGGAGTTTGTCT...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCGGTACATGGCGCCTTaGTTTTCTCTATCCACACCA +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSRYMAP*FSLSTP
Trigger: TGGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCATGTCTCCCGCTCAGATaGCAGGGCCCCACCATTGAC +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSCLPLR*QGPTID
Trigger: GTCAATGGTGGGGCCCTGGCATCTGAGCGGGAGACA...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGTGCAGCAAGATGTCTaGTGGGTTGTGGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQVQQDV*WVVGFQ
Trigger: CTGAAACCCCACAACCCAGCAGACATCTTGCTGCAC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGGGGACCCTGGTCACTaGTCACCACTGATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIGDPGH*SPLMGN
Trigger: GTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGGGGACCCTGGTCACTaGTCACCACTGATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIGDPGH*SPLMGN
Trigger: GTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCATAGTTGGGGAGGCTaGCTGCCCGGTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVHSWGG*LPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTCTGTGGTGCTGCCCTaGTTCCGGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCSVVLP*FRATKP
Trigger: TGGCTTCGTGGCCCGGAAGCAGGGCAGCACCACAGA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCGTTGTCTGTGGTGCTaGCCTGCTTCCGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQRCLWC*PASGPR
Trigger: TCGTGGCCCGGAAGCAGGGCAGCACCACAGACAACG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGCACCAGTTCATGGCTaGACGGAGGAACGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSAPVHG*TEERKG
Trigger: CCCCTTGCGTTCCTCCGTCCAGCCATGAACTGGTGC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCACAACTGTCTTCCATaGCTCGGCTCACACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQHNCLP*LGSHSC
Trigger: ACACGAGTGTGAGCCGAGCCATGGAAGACAGTTGTG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCACAACTGTCTTCCATaGCTCGGCTCACACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSHNCLP*LGSHSC
Trigger: ACACGAGTGTGAGCCGAGCCATGGAAGACAGTTGTG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCACAACTGTCTTCCATaGCTCGGCTCACACTCGTGT +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEHNCLP*LGSHSC
Trigger: ACACGAGTGTGAGCCGAGCCATGGAAGACAGTTGTG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCAACCGGTCCAGAGCCTaGTCAGCACTGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSNRSRA*SALAEM
Trigger: CATTTCAGCCAGTGCTGACCAGGCTCTGGACCGGTT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGATATCTCCTCTGGGATaGCTGGCCAATGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEISPLG*LANGHD
Trigger: ATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATAT...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTGTACACAGGTTGCATaGCTTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLCTQVA*LGRCGE
Trigger: TTCTCCGCATCTACCAAGCCATGCAACCTGTGTACA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTATACAGATGCTGGCCTaGCTGTCTCCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCIQMLA*LSPGML
Trigger: CAACATCCCTGGAGACAGCCAGGCCAGCATCTGTAT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTACAACCCCCAAGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSTTPKS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACTTGGGGGTTGT...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTAGTCTACAGATACGCTaGGCCCATTCTCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSSLQIR*AHSPGV
Trigger: AACACCTGGAGAATGGGCCCAGCGTATCTGTAGACT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLPSSGP*VCPTTS
Trigger: AGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEPSSSP*RTGSHP
Trigger: TGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGT +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSWGQGL*VATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSGAWGS*GSTSGK
Trigger: CTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSGAWGS*GSTSGK
Trigger: CTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSGAWGS*GSTSGK
Trigger: CTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCC...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSDGNSG*IQLDAA
Trigger: AGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSDGNSG*IQLDAA
Trigger: AGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATC...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGGCTTGGAAGGAAGGTaGAAGAGGCTGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILGLEGR*KRLDFL
Trigger: CAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTACCCCTGCTACCCGATaGGCTACCAGCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVTPATR*ATSPSR
Trigger: CCTGGAAGGGCTGGTAGCCCATCGGGTAGCAGGGGT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCATACTGTCCATCACTaGCTGCCCGCCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLHTVHH*LPASGV
Trigger: CACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGTGGCCTCCGGAGACTaGTTTTCATACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECVASGD*FSYCPS
Trigger: TGATGGACAGTATGAAAACCAGTCTCCGGAGGCCAC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCAGCAAGATGTCTGCTaGGTTGTGGGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSQQDVC*VVGFQA
Trigger: GGCCTGAAACCCCACAACCCAGCAGACATCTTGCTG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSFWQHL*GAARCL
Trigger: CAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSALYCG*PWLSGE
Trigger: TTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGCCGATGGCTCAAACTaGGACTACCAGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLADGSN*DYQGQP
Trigger: TGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGCCGATGGCTCAAACTaGGACTACCAGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGADGSN*DYQGQP
Trigger: TGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCAAGGCTCCTGGCTCCTaGTCCTTTAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSKAPGS*SFRSAM
Trigger: CATCGCACTCCTAAAGGACCAGGAGCCAGGAGCCTT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGCTTCAGCAGGTCAGTaGTTGAGTTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIASAGQ*LSWQGL
Trigger: CAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGGCAAGCGTTGTCTGTaGTGCTGCCCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQGKRCL*CCPASG
Trigger: CCCGGAAGCAGGGCAGCACCACAGACAACGCTTGCC...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTCCGGGGCTCACCTGTaGGGTGCAGCAAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSSGAHL*GAARCL
Trigger: CAGACATCTTGCTGCACCCCACAGGTGAGCCCCGGA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGGCCTCCAGGTCTTCTaGCCAGAGCATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLGLQVF*PEHAGQ
Trigger: CTGTCCTGCATGCTCTGGCCAGAAGACCTGGAGGCC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTTGGACTTCAACATCTaGGCCACTTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQLDFNI*ATSRRL
Trigger: CAACCTCCGTGAAGTGGCTCAGATGTTGAAGTCCAA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTCTGTTCAGAGAGGTTaGATAGCAGGTAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSSVQRG*IAGSCP
Trigger: GGGGCAACTACCTGCTATTCAACCTCTCTGAACAGA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGGCTTGTTGTTCATTTTaGTGGAGCCAGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILACCSF*WSQRVG
Trigger: GCCTACTCTCTGGCTCCATCAAAATGAACAACAAGC...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCCGTGCATGATCACATaGTGCAGAAACAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSPCMIT*CRNKGL
Trigger: CAAGCCTTTGTTTCTGCATCATGTGATCATGCACGG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCCGTGCATGATCACATaGTGCAGAAACAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSPCMIT*CRNKGL
Trigger: CAAGCCTTTGTTTCTGCATCATGTGATCATGCACGG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGTGGTTGGGAGTGGCTaGCAGGGCAGGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVVVGSG*QGRPCS
Trigger: ACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCAC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGAGCTCTTTCTTCTCCTaGGGACTCAGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLSSFFS*GLRAAG
Trigger: CCCTGCTGCCCTGAGTCCTCAGGAGAAGAAAGAGCT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTAGCTCTTTCTTCTCCTaGGGACTCAGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSSFFS*GLRAAG
Trigger: CCCTGCTGCCCTGAGTCCTCAGGAGAAGAAAGAGCT...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCCAGGGCCCCACCATTaGCGTGAACCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFPGPHH*REPGLG
Trigger: TCCCAGCCCAGGTTCACGTCAATGGTGGGGCCCTGG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCCAGCATCAACATATTaGGGGTTTCGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECPASTY*GFRWTA
Trigger: AGCAGTCCATCGAAACCCTCAATATGTTGATGCTGG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTTTCTGGAGAAGAGCTaGATGGTTGGAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QLAGEALGVWLPSIQGILFLEKS*MVGGSS
Trigger: ACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTGGAGGCCTGGAACTTaGTGGCTTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVWRPGT*WLPTGC
Trigger: GCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSKSGSV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGKSGSV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCTTTCTTGCCCTGCTaGGTGATGGTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPFLPC*VMVGGG
Trigger: ACCCCCTCCAACCATCACTCAGCAGGGCAAGAAAGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCTTGGAGACGAAGTTaGCGATGGCAGACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPWRRS*RWQTQA
Trigger: AGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTCTCCAGGTGTTCCATaGCTTGAATTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQSPGVP*LEFSLV
Trigger: GACCAGAGAAAATTCAAGGCATGGAACACCTGGAGA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGAATTCAGACCCCTCTaGACAGCCTCTCGGCTACTA +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSEFRPL*TASRLL
Trigger: TAGTAGCCGAGAGGCTGTGCAGAGGGGTCTGAATTC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTGGGGCTGCTGCTGTTaGCATGAATTCAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRWGCCC*HEFRPL
Trigger: GAGGGGTCTGAATTCATGGCAACAGCAGCAGCCCCA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGTGCAGCAAGATGTCTaGTGGGTTGTGGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSVQQDV*WVVGFQ
Trigger: CTGAAACCCCACAACCCAGCAGACATCTTGCTGCAC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTGGGGACCCTGGTCACTaGTCACCACTGATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCGDPGH*SPLMGN
Trigger: GTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCC...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCTGATAACTCAGTGCTaGAGGGCTCGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLLITQC*RARLPQ
Trigger: TTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTGGTGTGGGGCTCCCCTaGCGGAAGGCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFGVGLP*RKAAES
Trigger: AGACTCAGCAGCCTTCCGGCAGGGGAGCCCCACACC...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGAGAGAAGGAGACGGTaGTGCTCCCACTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRERRRR*CSHWPC
Trigger: GCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLFTLKW*VLGASR
Trigger: CCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCFTLKW*VLGASR
Trigger: CCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTATGGGCACCAGTTCATaGCTGGACGGAGGAACGCAA +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIMGTSS*LDGGTQ
Trigger: TTGCGTTCCTCCGTCCAGCCATGAACTGGTGCCCAT...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCGGTTTCCCTTGTTGTaGAGAACAACGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECRFPLL*RTTTLW
Trigger: CCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTAACCGGTCCAGAGCCTaGTCAGCACTGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVINRSRA*SALAEM
Trigger: CATTTCAGCCAGTGCTGACCAGGCTCTGGACCGGTT...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCTCCTCTGGGATGGCTaGCCAATGGGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSLLWDG*PMGTIL
Trigger: CAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQLQEQP*FNGDTD
Trigger: ATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAG...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGAGTCTACAGATACGCTaGGCCCATTCTCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCESLQIR*AHSPGV
Trigger: AACACCTGGAGAATGGGCCCAGCGTATCTGTAGACT...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCACTCTGCCCGTCCTaGATGGGCAGCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPLCPS*MGSSSS
Trigger: AGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGACCCCAAGAGGGGCTaGGAAGAGAGTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVDPKRG*EESGEA
Trigger: GGCTTCTCCACTCTCTTCCCAGCCCCTCTTGGGGTC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTAAGTGGGTGGGACTaGCGGGAAGACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCVSGWD*REDPKR
Trigger: CCTCTTGGGGTCTTCCCGCCAGTCCCACCCACTTAC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGGTTGGATCCAGCTaGATGCAGCTGATAATCGTA +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSLVGSS*MQLIIV
Trigger: TACGATTATCAGCTGCATCCAGCTGGATCCAACCAG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCTGGTTGGATCCAGCTaGATGCAGCTGATAATCGTA +
Preference number: 4 (lower is better)
Translates to: KAWRQERAEPLGWISPRSLVGSS*MQLIIV
Trigger: TACGATTATCAGCTGCATCCAGCTGGATCCAACCAG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTTTGGATGGAAACTCTaGTTGGATCCAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECFGWKL*LDPAGC
Trigger: GCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGCTTGGAAGGAAGGTaGAAGAGGCTGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGLEGR*KRLDFL
Trigger: CAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACCCCTCGTCTTCCTCTaGCTGGATCAGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSPLVFL*LDQSSG
Trigger: GCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169786.8
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRGVRGP*SLLTTD
Trigger: ATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSWRRAE*LEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRGRTVL*LALAFW
Trigger: CCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCTCCCAGGTACCATGTaGACACTGGCCGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSLPGTM*TLAALY
Trigger: GTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGCCGATGGCTCAAACTaGGACTACCAGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQADGSN*DYQGQP
Trigger: TGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGC...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTTGATGGCTTCCCACTaGGTGCCGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVLMASH*VPAQAG
Trigger: CCCAGCCTGGGCCGGCACCCAGTGGGAAGCCATCAA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSLPGQC*SSVLRG
Trigger: ACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAA...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTCAGGGAATGACGGTGTaGATGGGGCCTGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCQGMTV*MGPGSQ
Trigger: CTGGCTACCAGGCCCCATCCACACCGTCATTCCCTG...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCTGGTAAGGCTGGTGTaGGGCTCCCCTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFLVRLV*GSPAGR
Trigger: CCTTCCGGCAGGGGAGCCCCACACCAGCCTTACCAG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGACAGGGCAGGGCCAGTaGGATGACGGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLTGQGQ*DDGVLI
Trigger: TATCAGCACTCCGTCATCCCACTGGCCCTGCCCTGT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAATGGCAGACGCAGGCTaGTTGGGGTCAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRMADAG*LGSSSA
Trigger: CGCAGAGCTTGACCCCAACCAGCCTGCGTCTGCCAT...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGATGGCAGACGCAGGCTaGTTGGGGTCAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQMADAG*LGSSSA
Trigger: CGCAGAGCTTGACCCCAACCAGCCTGCGTCTGCCAT...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATCCGGGGCTCACCTGTaGGGTGCAGCAAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRSGAHL*GAARCL
Trigger: CAGACATCTTGCTGCACCCCACAGGTGAGCCCCGGA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 72 bp GTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTaGGTCATTCACACGACTCCCACATGGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VLRRKHHLLASA*VIHTTPTWLRK
Trigger: TTTCCTGAGCCATGTGGGAGTCGTGTGAATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 72 bp ATGCTTCCTAGAGACGTGCTGAGAAGGAAGCACCACTaGCTAGCATCTGCCTTGGTCATTCACACGACTCCC +
Preference number: 4 (lower is better)
Translates to: MLPRDVLRRKHH*LASALVIHTTP
Trigger: GGGAGTCGTGTGAATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCTGGTCAGCACTGGCTaGAATGTTGCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVILVSTG*NVAVVQ
Trigger: CTGCACTACAGCAACATTTCAGCCAGTGCTGACCAG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCCGTGCATGATCACATaGTGCAGAAACAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSPCMIT*CRNKGL
Trigger: CAAGCCTTTGTTTCTGCATCATGTGATCATGCACGG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGGGGATGCCGTGCATaGTCACATGATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSWGCRA*SHDAET
Trigger: TGTTTCTGCATCATGTGATCATGCACGGCATCCCCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRALVQW*YRCWPG
Trigger: GCCAGGCCAGCATCTGTATCACCATTGAACCAGGGC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCCAGCATCAACATATTaGGGGTTTCGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSPASTY*GFRWTA
Trigger: AGCAGTCCATCGAAACCCTCAATATGTTGATGCTGG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTGATAATCGTAAGGTaGATAAGGCCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLIIVR*IRPARR
Trigger: TCTTCTGGCAGGCCTTATTCACCTTACGATTATCAG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTTTCTGGAGAAGAGCTaGATGGTTGGAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQFLEKS*MVGGSS
Trigger: ACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGTGCCCGGTCTCCCACTaGCATTCTTCGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQCPVSH*HSSLLW
Trigger: CCAGAGAAGCGAAGAATGTCAGTGGGAGACCGGGCA...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCKTLSH*WWHSWG
Trigger: TCCCCAACTATGCCACCATCAATGGGAAAGTGTCTT...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVKSGSV*EKETVL
Trigger: CAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCTTTCTTGCCCTGCTaGGTGATGGTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPFLPC*VMVGGG
Trigger: ACCCCCTCCAACCATCACTCAGCAGGGCAAGAAAGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTCCTTTCTTGCCCTGCTaGGTGATGGTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCPFLPC*VMVGGG
Trigger: ACCCCCTCCAACCATCACTCAGCAGGGCAAGAAAGG...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGGTCTCGGCTTGGAATaGCCAGTTTACAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRGLGLE*PVYRAG
Trigger: CCCTGCCCTGTAAACTGGTCATTCCAAGCCGAGACC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSAETLK*TMVAAG
Trigger: ACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCCTTGGAGACGAAGTTaGCGATGGCAGACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQPWRRS*RWQTQA
Trigger: AGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGGTTTCTGGTAGGCTGTaGTTGTGGTTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEVSGRL*LWLWLY
Trigger: ATACAGCCACAACCACAATCACAGCCTACCAGAAAC...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS-3UTR GCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCAGAAGCTGCAGACTTTaGAAACACAGCCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSRSCRL*KHSLPE
Trigger: CTCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCATAGAATCTCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSIESLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTAT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTCTCCAGGTGTTCCATaGCTTGAATTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECSPGVP*LEFSLV
Trigger: GACCAGAGAAAATTCAAGGCATGGAACACCTGGAGA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGRVSMD*SISCWD
Trigger: GTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSRVSMD*SISCWD
Trigger: GTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGTAGCCACCATAAGCTaGATGCCGGTCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVVATIS*MPVQAG
Trigger: CCCAGCTTGGACCGGCATGCAGCTTATGGTGGCTAC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGGTAGCCAGAGGCACTaGTTTGCCGGGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCGSQRH*FAGTVL
Trigger: CAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCGGTTTCCCTTGTTGTaGAGAACAACGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCERFPLL*RTTTLW
Trigger: CCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCGGTTTCCCTTGTTGTaGAGAACAACGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSRFPLL*RTTTLW
Trigger: CCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSGMAGQ*ARSCPH
Trigger: ATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSGMAGQ*ARSCPH
Trigger: ATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCTCCTCTGGGATGGCTaGCCAATGGGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQLLWDG*PMGTIL
Trigger: CAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTGCACATATCTCCTCTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTGTACACAGGTTGCATaGCTTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQCTQVA*LGRCGE
Trigger: TTCTCCGCATCTACCAAGCCATGCAACCTGTGTACA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCCCCAAGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPPSHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACTTGGGGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVRVCST*LGVADR
Trigger: CCTGTCAGCCACTCCCAACCACGTGGAACACACCCT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRRVCST*LGVADR
Trigger: CCTGTCAGCCACTCCCAACCACGTGGAACACACCCT...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGCTGAGCCCGGTACATaGCGCCTTGCTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIAEPGT*RLAFLY
Trigger: ATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACCACTCTGCCCGTCCTaGATGGGCAGCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRPLCPS*MGSSSS
Trigger: AGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGT +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCWGQGL*VATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCACATCTGGAAAGGACTaGGATCTGAATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECTSGKD*DLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGT...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGACTGGGTAAGTGGGTaGGACTGGCGGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVDWVSG*DWREDP
Trigger: GGGGTCTTCCCGCCAGTCCCACCCACTTACCCAGTC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCAGAGAATGCCCACTaGGGATATAGCCAGATCGGG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPENAH*GYSQIG
Trigger: CCCGATCTGGCTATATCCCCAGTGGGCATTCTCTGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCCAGAGAATGCCCACTaGGGATATAGCCAGATCGGG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCPENAH*GYSQIG
Trigger: CCCGATCTGGCTATATCCCCAGTGGGCATTCTCTGG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCTGGTTGGATCCAGCTaGATGCAGCTGATAATCGTA +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLVGSS*MQLIIV
Trigger: TACGATTATCAGCTGCATCCAGCTGGATCCAACCAG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTTTGGATGGAAACTCTaGTTGGATCCAGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEFGWKL*LDPAGC
Trigger: GCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAA...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCAGCAAGATGTCTGCTaGGTTGTGGGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLQQDVC*VVGFQA
Trigger: GGCCTGAAACCCCACAACCCAGCAGACATCTTGCTG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCAGCAAGATGTCTGCTaGGTTGTGGGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCQQDVC*VVGFQA
Trigger: GGCCTGAAACCCCACAACCCAGCAGACATCTTGCTG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRYCGWP*LSGEEL
Trigger: CAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTGTACCATGTGGACACTaGCCGCACTGTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCVPCGH*PHCTVA
Trigger: AGCCACAGTACAGTGCGGCCAGTGTCCACATGGTAC...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCCCATCACCTGCCGATaGCTCAAACTGGGACTACCA +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCPITCR*LKLGLP
Trigger: TGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCA +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVAALAG*PETTLP
Trigger: TGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSTAVEA*NLMASH
Trigger: GTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTAAGGCTCCTGGCTCCTaGTCCTTTAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCKAPGS*SFRSAM
Trigger: CATCGCACTCCTAAAGGACCAGGAGCCAGGAGCCTT...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGCCTCACCAGCTCATaGGTCATGTCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSCLTSS*VMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTAGCTCTGCGAAGAGGTaGCAAGCGTTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGSSAKR*QALSVV
Trigger: CACCACAGACAACGCTTGCCACCTCTTCGCAGAGCT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCAWHFR*QEKLQT
Trigger: AGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGAGACTGGTAGGCTGTaGTTGTGGTTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIETGRL*LWLWLY
Trigger: ATACAGCCACAACCACAATCACAGCCTACCAGTCTC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTTTGGACTTCAACATCTaGGCCACTTCACGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVILDFNI*ATSRRL
Trigger: CAACCTCCGTGAAGTGGCTCAGATGTTGAAGTCCAA...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVCGGLH*ARCPWP
Trigger: AGGCCATGGACACCTGGCTCAATGCAGACCCCCACA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGCTTGTTGTTCATTTTaGTGGAGCCAGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSACCSF*WSQRVG
Trigger: GCCTACTCTCTGGCTCCATCAAAATGAACAACAAGC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACTTCACGGAGGTTGCTaGGGAAGTTCTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSLHGGC*GSSPHW
Trigger: CCAATGAGGAGAACTTCCGCAGCAACCTCCGTGAAG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCTTCACGGAGGTTGCTaGGGAAGTTCTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSLHGGC*GSSPHW
Trigger: CCAATGAGGAGAACTTCCGCAGCAACCTCCGTGAAG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTCCACTTCACGGAGGTTaGTGCGGAAGTTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCPLHGG*CGSSPH
Trigger: ATGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGG...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTCCAGGACCTTAGCATaGAGCTTGGTGATGTCAGGC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLSRTLA*SLVMSG
Trigger: GCCTGACATCACCAAGCTGCATGCTAAGGTCCTGGA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCAGGGATGTTGTAAATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: SWRGFGGVASIHTGDSECQGCCK*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATTTACAACATCCCTG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCGGTACATGGCGCCTTaGTTTTCTCTATCCACACCA +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIRYMAP*FSLSTP
Trigger: TGGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGAATTCAGACCCCTCTaGACAGCCTCTCGGCTACTA +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSEFRPL*TASRLL
Trigger: TAGTAGCCGAGAGGCTGTGCAGAGGGGTCTGAATTC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGAATTCAGACCCCTCTaGACAGCCTCTCGGCTACTA +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLEFRPL*TASRLL
Trigger: TAGTAGCCGAGAGGCTGTGCAGAGGGGTCTGAATTC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTGGGGCTGCTGCTGTTaGCATGAATTCAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVWGCCC*HEFRPL
Trigger: GAGGGGTCTGAATTCATGGCAACAGCAGCAGCCCCA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATGGGGCTGCTGCTGTTaGCATGAATTCAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRWGCCC*HEFRPL
Trigger: GAGGGGTCTGAATTCATGGCAACAGCAGCAGCCCCA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVHCPVS*LRAPRY
Trigger: GTACCTGGGAGCCCTCAGGCACGACACAGGACAGTG...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGATGGACCCATCACCTaGCGATGGCTCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRDGPIT*RWLKLG
Trigger: TCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCPRADD*IAVETG
Trigger: TCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGG...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCCAGAGGCACTGCTTTaGCGGGACAGTGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQPEALL*RDSVGL
Trigger: AAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTGAGGCACTTTCTGATCGAGAC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSVSIRK*LTSSWV
Trigger: GACCCATGAGCTGGTGAGGCACTTTCTGATCGAGAC...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTATGGGCACCAGTTCATaGCTGGACGGAGGAACGCAA +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVMGTSS*LDGGTQ
Trigger: TTGCGTTCCTCCGTCCAGCCATGAACTGGTGCCCAT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCACAACTGTCTTCCATaGCTCGGCTCACACTCGTGT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGHNCLP*LGSHSC
Trigger: ACACGAGTGTGAGCCGAGCCATGGAAGACAGTTGTG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCACAACTGTCTTCCATaGCTCGGCTCACACTCGTGT +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSHNCLP*LGSHSC
Trigger: ACACGAGTGTGAGCCGAGCCATGGAAGACAGTTGTG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQGMAGQ*ARSCPH
Trigger: ATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCC...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAATATCTCCTCTGGGATaGCTGGCCAATGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSISPLG*LANGHD
Trigger: ATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATAT...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTGCACATATCTCCTCTaGGATGGCTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCCTYLL*DGWPMG
Trigger: GCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGATACAGATGCTGGCCTaGCTGTCTCCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLIQMLA*LSPGML
Trigger: CAACATCCCTGGAGACAGCCAGGCCAGCATCTGTAT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: LAGEALGVWLPSIQGILSLQEQP*FNGDTD
Trigger: ATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGGATGGCACAGGTGTaGAACTGCACTCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLWMAQV*NCTRKM
Trigger: CATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTGGATGGCACAGGTGTaGAACTGCACTCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSWMAQV*NCTRKM
Trigger: CATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCCCCAAGTCATGGATaGCACAGGTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPPSHG*HRCGTA
Trigger: TGCAGTTCCACACCTGTGCCATCCATGACTTGGGGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPSSSP*RTGSHP
Trigger: TGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGCTGAGCCCGGTACATaGCGCCTTGCTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLAEPGT*RLAFLY
Trigger: ATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGTAAGTGGGTGGGACTaGCGGGAAGACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVVSGWD*REDPKR
Trigger: CCTCTTGGGGTCTTCCCGCCAGTCCCACCCACTTAC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACCAGAGAATGCCCACTaGGGATATAGCCAGATCGGG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRPENAH*GYSQIG
Trigger: CCCGATCTGGCTATATCCCCAGTGGGCATTCTCTGG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLFWQHL*GAARCL
Trigger: CAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCTGGATCAGTCTTCTaGCAACACCTGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRAGSVF*QHLWGA
Trigger: TGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169786.8
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRKTRAR*SVGTHC
Trigger: ACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGTCTCAGATGTGGCTTTaGAAATGGCCTGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQSQMWL*KWPVAR
Trigger: CCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGA...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 72 bp TGGAAAACAACCGAGACCCTCCAAGTTTTCAGCCATTaGAGGAGACAGGAGACAACAAGCAAGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: WKTTETLQVFSH*RRQETTSKRPT
Trigger: GGTGGGCCTCTTGCTTGTTGTCTCCTGTCTCCTCAAATGGCTGAAAACTTGGAGGGTCTCGGTTGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGAGACTGGTAGGCTGTaGTTGTGGTTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSETGRL*LWLWLY
Trigger: ATACAGCCACAACCACAATCACAGCCTACCAGTCTC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCCGTGCATGATCACATaGTGCAGAAACAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRPCMIT*CRNKGL
Trigger: CAAGCCTTTGTTTCTGCATCATGTGATCATGCACGG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTGGGGATGCCGTGCATaGTCACATGATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSWGCRA*SHDAET
Trigger: TGTTTCTGCATCATGTGATCATGCACGGCATCCCCA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTACACTCTGGGACTTATaGAGAGGGGCAGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFTLWDL*RGAAAE
Trigger: CTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGT...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGAAGTGCTGTCAGCACTaGGGATGGGGCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVKCCQH*GWGCLW
Trigger: CCACAAGCAGCCCCATCCTCAGTGCTGACAGCACTT...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCCTTTCTTGCCCTGCTaGGTGATGGTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFPFLPC*VMVGGG
Trigger: ACCCCCTCCAACCATCACTCAGCAGGGCAAGAAAGG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCTTGGGCAGAGACCTTaGAGTGAACAATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLGQRP*SEQWWQ
Trigger: CTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGATTGTCAGTCAGTGTaGTTCCTTGGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSDCQSV*FLGQRP
Trigger: AGGTCTCTGCCCAAGGAATCACACTGACTGACAATC...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGGATGACAGGAGAAGCTaGAGACTTTGCAAACACAGC +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRDDRRS*RLCKHS
Trigger: GCTGTGTTTGCAAAGTCTGCAGCTTCTCCTGTCATC...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACTTCACGGAGGTTGCTaGGGAAGTTCTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLHGGC*GSSPHW
Trigger: CCAATGAGGAGAACTTCCGCAGCAACCTCCGTGAAG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCAGACAAACTCCACTTTaGCATAGTCAGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSRQTPL*HSQEID
Trigger: ATCGATTTCCTGACTATGGCAAAGTGGAGTTTGTCT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTGGAGGCTGTGGAGTTaGCAGAGTCGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFWRLWS*QSRCSQ
Trigger: CTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGAATTCAGACCCCTCTaGACAGCCTCTCGGCTACTA +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCEFRPL*TASRLL
Trigger: TAGTAGCCGAGAGGCTGTGCAGAGGGGTCTGAATTC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVRRRRC*SHWPCH
Trigger: ATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCT...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCTTCTGGCCAGAGCATaGAGGACAGACAAATCCACG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQLLARA*RTDKST
Trigger: CGTGGATTTGTCTGTCCTGCATGCTCTGGCCAGAAG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTATATCTCCTCTGGGATaGCTGGCCAATGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVISPLG*LANGHD
Trigger: ATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATAT...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGACAACCCCCAAGTCATaGATGGCACAGGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQTTPKS*MAQVWN
Trigger: GTTCCACACCTGTGCCATCCATGACTTGGGGGTTGT...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTAGTCTACAGATACGCTaGGCCCATTCTCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSLQIR*AHSPGV
Trigger: AACACCTGGAGAATGGGCCCAGCGTATCTGTAGACT...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGCTGAGCCCGGTACATaGCGCCTTGCTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCAEPGT*RLAFLY
Trigger: ATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCACATCTGGAAAGGACTaGGATCTGAATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: FGGVASIHTGDSECLSSSTSGKD*DLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGT...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTGTAGTTTCCTTTGGTaGGAGCTGGGGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCCSFLW*ELGLSD
Trigger: ATCGCTCAGCCCCAGCTCCCACCAAAGGAAACTACA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRALYCG*PWLSGE
Trigger: TTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGKTRAR*SVGTHC
Trigger: ACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLMTALL*RLEARF
Trigger: GAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCAT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTACTTGGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCCAAGTA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGTACTTGGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCCAAGTA...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGCCTCACCAGCTCATaGGTCATGTCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLCLTSS*VMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGCTTCAGCAGGTCAGTaGTTGAGTTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVASAGQ*LSWQGL
Trigger: CAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATCTGTTCAGAGAGGTTaGATAGCAGGTAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRSVQRG*IAGSCP
Trigger: GGGGCAACTACCTGCTATTCAACCTCTCTGAACAGA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGCTTGTTGTTCATTTTaGTGGAGCCAGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LTSREEASVRFLLSEQEGACCSF*WSQRVG
Trigger: GCCTACTCTCTGGCTCCATCAAAATGAACAACAAGC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCGCTTGTTGTTCATTTTaGTGGAGCCAGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSACCSF*WSQRVG
Trigger: GCCTACTCTCTGGCTCCATCAAAATGAACAACAAGC...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGTGGGGATGCCGTGCATaGTCACATGATGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQWGCRA*SHDAET
Trigger: TGTTTCTGCATCATGTGATCATGCACGGCATCCCCA...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCTGCTGCTGTTGCCATaGATTCAGACCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFLLLLP*IQTPLH
Trigger: GTGCAGAGGGGTCTGAATTCATGGCAACAGCAGCAG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCTGATAATCGTAAGGTaGATAAGGCCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRLIIVR*IRPARR
Trigger: TCTTCTGGCAGGCCTTATTCACCTTACGATTATCAG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCATATCCACAGAGTTaGCGAAGAGCACATTGCAAG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPYPQS*RRAHCK
Trigger: CTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGAGAAGCTGCAGACTTTaGAAACACAGCCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQRSCRL*KHSLPE
Trigger: CTCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCT...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAGACAAACTCCACTTTaGCATAGTCAGGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQRQTPL*HSQEID
Trigger: ATCGATTTCCTGACTATGGCAAAGTGGAGTTTGTCT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACGGTACATGGCGCCTTaGTTTTCTCTATCCACACCA +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRRYMAP*FSLSTP
Trigger: TGGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATTGCAAGCTGCTCCTTaGTTCAGCAGGTCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLQAAP*FSRSVV
Trigger: AACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTGTTGGGGTCAAGCTCTaGGAAGAGGTGGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFVGVKL*EEVASV
Trigger: AACGCTTGCCACCTCTTCGCAGAGCTTGACCCCAAC...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTTGTGGCTGTATGCTTaGAGAAACTCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSLWLYA*RNSHGA
Trigger: GGCTCCATGAGAGTTTCTCCAAGCATACAGCCACAA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRRTTTL*GSALSQ
Trigger: CTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCT...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACGGTTTCCCTTGTTGTaGAGAACAACGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSRFPLL*RTTTLW
Trigger: CCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGTTTGTCCAGGCCATTaGTCAGTGGGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVVCPGH*SVGTGS
Trigger: AGACCCTGTCCCCACTGACCAATGGCCTGGACAAAC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVDGNSG*IQLDAA
Trigger: AGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGACTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLALAF*RRAEWL
Trigger: CAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAG...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTACCATGGAAACCTaGACCAGATGGACCCATCAC +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCVTMET*TRWTHH
Trigger: GTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAAC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGAAGGCTCCTGGCTCCTaGTCCTTTAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVKAPGS*SFRSAM
Trigger: CATCGCACTCCTAAAGGACCAGGAGCCAGGAGCCTT...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTGCCTCACCAGCTCATaGGTCATGTCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCCLTSS*VMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCAGAGTCTCAGATGTaGCTTTGGAAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPESQM*LWKWPV
Trigger: CACAGGCCATTTCCAAAGCCACATCTGAGACTCTGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGAAATCGATCATCTTTaGAGGCCTCATCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: PRDVLRRKHHLLASALVIEIDHL*RPHPDL
Trigger: AAGATCTGGATGAGGCCTTCAAAGATGATCGATTTC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCAGCATCAACATATTaGGGGTTTCGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPASTY*GFRWTA
Trigger: AGCAGTCCATCGAAACCCTCAATATGTTGATGCTGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGATGACAGGAGAAGCTaGAGACTTTGCAAACACAGC +
Preference number: 4 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRDDRRS*RLCKHS
Trigger: GCTGTGTTTGCAAAGTCTGCAGCTTCTCCTGTCATC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVDIVGV*IEPGVH
Trigger: ATGGACACCTGGCTCAATGCAGACCCCCACAATGTC...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTATAGAATCTCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSIESLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTAT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTCAGGGATGTTGTAAATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIQGCCK*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATTTACAACATCCCTG...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTCTCCAGGTGTTCCATaGCTTGAATTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLSPGVP*LEFSLV
Trigger: GACCAGAGAAAATTCAAGGCATGGAACACCTGGAGA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTTGTGGCTGTATGCTTaGAGAAACTCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLWLYA*RNSHGA
Trigger: GGCTCCATGAGAGTTTCTCCAAGCATACAGCCACAA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLLQEQP*FNGDTD
Trigger: ATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGATGGCACAGGTGTaGAACTGCACTCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVWMAQV*NCTRKM
Trigger: CATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTACATCTGGAAAGGACTaGGATCTGAATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: GKNTELHMECCVHVWSVCTSGKD*DLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGT...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCTGGGGCTCCACATCTaGAAAGGACTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFLGLHI*KGLGSE
Trigger: TTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCTGGTTGGATCCAGCTaGATGCAGCTGATAATCGTA +
Preference number: 4 (lower is better)
Translates to: SNLTSREEASVRFLLSEQLVGSS*MQLIIV
Trigger: TACGATTATCAGCTGCATCCAGCTGGATCCAACCAG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCACCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCAGGGATGTTGTAAATaGCAGATGTGTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLQGCCK*QMCTQV
Trigger: AACCTGTGTACACATCTGGCATTTACAACATCCCTG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTCTCCAGGTGTTCCATaGCTTGAATTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCSPGVP*LEFSLV
Trigger: GACCAGAGAAAATTCAAGGCATGGAACACCTGGAGA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLQEQP*FNGDTD
Trigger: ATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFKTRAR*SVGTHC
Trigger: ACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCCACTTTCTTTCTTGTaGATCCAGGTCACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVPLSFL*IQVTEG
Trigger: ACCTTCTGTGACCTGGATCCACAAGAAAGAAAGTGG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
3UTR CAA 72 bp AAAGAAAACCCAGAGCTGGATGGACACTGCATTCATTaGTCTCCCCTGCACTTCTCAGACAGCACAAGAACT +
Preference number: 4 (lower is better)
Translates to: KENPELDGHCIH*SPLHFSDSTRT
Trigger: AGTTCTTGTGCTGTCTGAGAAGTGCAGGGGAGACAAATGAATGCAGTGTCCATCCAGCTCTGGGTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGAAATCGATCATCTTTaGAGGCCTCATCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVEIDHL*RPHPDL
Trigger: AAGATCTGGATGAGGCCTTCAAAGATGATCGATTTC...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTTTCTGGAGAAGAGCTaGATGGTTGGAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFFLEKS*MVGGSS
Trigger: ACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTTGTGGCTGTATGCTTaGAGAAACTCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVLWLYA*RNSHGA
Trigger: GGCTCCATGAGAGTTTCTCCAAGCATACAGCCACAA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTGTACACAGGTTGCATaGCTTGGTAGATGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFCTQVA*LGRCGE
Trigger: TTCTCCGCATCTACCAAGCCATGCAACCTGTGTACA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR TCA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAAAGAAGAGCTTTCTTTaGTTGTCAGTCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: ATSNLTSREEASVRFLLSKKSFL*LSVSVI
Trigger: AATCACACTGACTGACAATCAAAGAAAGCTCTTCTT...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR GCA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGATAGAATCTCTTCATTaGAAACCGGTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KEIFGKNTELHMECCVHVIESLH*KPVQSL
Trigger: CAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTAT...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CCA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTACTTGGAAGTGTCCTaGACAAACTTCACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFYLEVS*TNFTLA
Trigger: GGCTAAAGTGAAGTTTGTCCAGGACACTTCCAAGTA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
3UTR CAA 72 bp TCTTGTTTAAAGGAAATCTTTGGCAAGAATACAGAGTaGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SCLKEIFGKNTE*HMECCVHVWSV
Trigger: CACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTTTAAACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS CCA 90 bp GGCCTTCACCTTGAAGTGGTGGGTCTTGGGGGCCTCCAGGTCTTCTaGCTGAAGCAGCAGCCGCCTCCTCGGGTCGGGCGCCGCACCCCC +
Preference number: 5 (lower is better)
Translates to: GLHLEVVGLGGLQVF*LKQQPPPRVGRRTP
Trigger: GGGGGTGCGGCGCCCGACCCGAGGAGGCGGCTGCTGCTTCAGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000191104.7
ENSMUST00000212888.2
CDS-3UTR CAA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCCACGGGTTGGAGCTaGGGGCAGCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPTGWS*GQLGLH
Trigger: GTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCCCACGGGTTGGAGCTaGGGGCAGCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASPTGWS*GQLGLH
Trigger: GTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS CCA 90 bp TGGGACAATGTGGCGGCCAGGGGAGGGCACAGTCGGGCCCCCGCCTaGATGGGATCTGAGTTGCTGAGCCCGGTACATGGCGCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: WDNVAARGGHSRAPA*MGSELLSPVHGALL
Trigger: AAGCAAGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCATCCAGGCGGGGGCCCGACTGTGCCCTCCCCTGGCCGCCACATTGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCAC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLSAGQW*SWQGLS
Trigger: GCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp CGCTGCCCTTGGGAACTCTGGGAGAGCAGCTACGGGGGTCTCTGCTaGCAGCTGGGGGCTAGGCTTGCTGCGGGCAAGACTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RCPWELWESSYGGLC*QLGARLAAGKTLQW
Trigger: CCACTGCAGAGTCTTGCCCGCAGCAAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTAGCTGCTCTCCCAGAGTTCCCAAGGGCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 90 bp GGTGGGCACCAGGGTGTCGGCCCAGGCTTGGGCTTCCCGGAGTGGTaGCCACACTGCTGTGGAGGCCTGGAACTTGATGGCTTCCCACTG +
Preference number: 5 (lower is better)
Translates to: GGHQGVGPGLGFPEW*PHCCGGLELDGFPL
Trigger: CAGTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGTGTGGTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp TGGTGCGCTGAAGCTCTTAGGCTCAACGTCCTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCACGGACTCCACATAGCTCCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: WCAEALRLNVLSSRP*HRCPRHGLHIAPGL
Trigger: GAGCCCCGGAGCTATGTGGAGTCCGTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAGGACGTTGAGCCTAAGAGCTTCAGCGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp CCCACCCAGGTGCCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGAGGCCAGATTCCCTTGGTGGGCACC +
Preference number: 5 (lower is better)
Translates to: PTQVPAQAWAPRADD*IAVETGGQIPLVGT
Trigger: GGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCACCTGGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGCTGCCCCAAGCTGCCTGAGCGGATGCTGGAGTCCAGCATAGGCTaGAAGGGTGTCCGGGGACCCTGGTCACTGCTCACCACTGATGGG +
Preference number: 5 (lower is better)
Translates to: GCPKLPERMLESSIG*KGVRGPWSLLTTDG
Trigger: CCCATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACCCTTCCAGCCTATGCTGGACTCCAGCATCCGCTCAGGCAGCTTGGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp AGCCATGGTGGGGTTGACGGCCCGCCGGCCAAAACCAGGGCTAGGTaGAGTGTTGGTACCCACTGTCCTGTGTCGTGCCTGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SHGGVDGPPAKTRAR*SVGTHCPVSCLRAP
Trigger: GGGAGCCCTCAGGCACGACACAGGACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTTGGCCGGCGGGCCGTCAACCCCACCATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGCCACTTCACGGAGGTaGCTGCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGGC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCCCACTTTCACTGGTGTaGGTGACCCCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLPLSLV*VTPSRE
Trigger: CTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGG...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCACTGGCCATGCCATaGGCGACAGGCGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPLAMP*ATGEED
Trigger: GTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCACTGGCCATGCCATaGGCGACAGGCGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPLAMP*ATGEED
Trigger: GTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp GCTCTGATAACTCAGTGCTGCAGGGCTCGGCTGCCCCAAGCTGCCTaGGCGGATGCTGGAGTCCAGCATAGGCTGGAAGGGTGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: ALITQCCRARLPQAA*ADAGVQHRLEGCPG
Trigger: CCCCGGACACCCTTCCAGCCTATGCTGGACTCCAGCATCCGCTCAGGCAGCTTGGGGCAGCCGAGCCCTGCAGCACTGAGTTATCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp TCTTGGCCAGACCTGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCATCTCCTCAAAGGCCTCCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: SWPDLEESAPHCVAG*LGRSPPSPQRPPCS
Trigger: GCTACAAGGAGGCCTTTGAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp CCCGTTCCTCAGGGGTGTCTCGTGCCCATAGGCGTGAGCAGCTGGTaGGCTGAAGCTCTTAGGCTCAACGTCCTGAGCTCGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PVPQGCLVPIGVSSW*AEALRLNVLSSRPC
Trigger: GCAGGGCCTCGAGCTCAGGACGTTGAGCCTAAGAGCTTCAGCGCACCAGCTGCTCACGCCTATGGGCACGAGACACCCCTGAGGAACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp TCCAAGCTGGGGCTTCCAGGAACCACGGATCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTGCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SKLGLPGTTDPDPPR*RPKLGLPGLMTALL
Trigger: CAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGGATCCGTGGTTCCTGGAAGCCCCAGCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGCCAGACCTGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTCCTCAAAGGCCTCCTTGTAGCTATG +
Preference number: 5 (lower is better)
Translates to: GQTWRRARHTVWRAA*GGPLHLLKGLLVAM
Trigger: CATAGCTACAAGGAGGCCTTTGAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGTCCCGTTCCTCAGGGGTGTCTCGTGCCCATAGGCGTGAGCAGCTaGTGCGCTGAAGCTCTTAGGCTCAACGTCCTGAGCTCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPVPQGCLVPIGVSS*CAEALRLNVLSSRP
Trigger: GGGCCTCGAGCTCAGGACGTTGAGCCTAAGAGCTTCAGCGCACCAGCTGCTCACGCCTATGGGCACGAGACACCCCTGAGGAACGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGGCTGATGACTGCATTGCTGTGGAGACTGGAGGCCAGATTCCCTTaGTGGGCACCAGGGTGTCGGCCCAGGCTTGGGCTTCCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: GLMTALLWRLEARFP*WAPGCRPRLGLPGV
Trigger: CACTCCGGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp TGCCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTCCCTTGGTGGGCACCAGGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: CRPKLGLPGLMTALL*RLEARFPWWAPGCR
Trigger: CCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp TCCTTGCGGCCCCTAAGACAGCTCCACTCCTTATTGCTGGGCCTATaGCGGCCCAGGATGGTACAGCAGTGTCGGTGGGCCACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: SLRPLRQLHSLLLGL*RPRMVQQCRWATLG
Trigger: CCCGAGGGTGGCCCACCGACACTGCTGTACCATCCTGGGCCGCCATAGGCCCAGCAATAAGGAGTGGAGCTGTCTTAGGGGCCGCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190389.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGVCSTW*GVADRA
Trigger: TGCCCTGTCAGCCACTCCCAACCACGTGGAACACAC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp CCAGGGCTAGGTGGAGTGTTGGTACCCACTGTCCTGTGTCGTGCCTaGGGGCTCCCAGGTACCATGTGGACACTGGAGGAGAGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: PGLGGVLVPTVLCRA*GLPGTMWTLEESAP
Trigger: TGGCGCGCTCTCCTCCAGTGTCCACATGGTACCTGGGAGCCCTCAGGCACGACACAGGACAGTGGGTACCAACACTCCACCTAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189228.2
CDS CCA 90 bp CACCGCTGTCCTCGCCACGGACTCCACATAGCTCCGGGGCTCTTCTaGAGGCTTAGTCACCTCCTCCCCCTCGTCTTCCTCTGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: HRCPRHGLHIAPGLF*RLSHLLPLVFLWLD
Trigger: ATCCAGCCAGAGGAAGACGAGGGGGAGGAGGTGACTAAGCCTCCAGAAGAGCCCCGGAGCTATGTGGAGTCCGTGGCGAGGACAGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 90 bp CTGATGACTGCATTGCTGTGGAGACTGGAGGCCAGATTCCCTTGGTaGGCACCAGGGTGTCGGCCCAGGCTTGGGCTTCCCGGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LMTALLWRLEARFPW*APGCRPRLGLPGVV
Trigger: CACCACTCCGGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQLWGSA*SQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLWRTTT*WGSALS
Trigger: GCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCA...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASVCSTW*GVADRA
Trigger: TGCCCTGTCAGCCACTCCCAACCACGTGGAACACAC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGVCSTW*GVADRA
Trigger: TGCCCTGTCAGCCACTCCCAACCACGTGGAACACAC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASVCSTW*GVADRA
Trigger: TGCCCTGTCAGCCACTCCCAACCACGTGGAACACAC...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQVCSTW*GVADRA
Trigger: TGCCCTGTCAGCCACTCCCAACCACGTGGAACACAC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGGTTTGTCCAGGCCATaGGTCAGTGGGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRGLSRP*VSGDRV
Trigger: GACCCTGTCCCCACTGACCAATGGCCTGGACAAACC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGGTTTGTCCAGGCCATaGGTCAGTGGGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASGLSRP*VSGDRV
Trigger: GACCCTGTCCCCACTGACCAATGGCCTGGACAAACC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTTTGCCGGGACAGTGTaGGTCTTCGGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASFAGTV*VFGPQG
Trigger: CCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRVSDVA*EMACGP
Trigger: CGGGCCACAGGCCATTTCCAAAGCCACATCTGAGAC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: GPPPPRRPVCSLRERKSLALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...GAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp GTCGCTGCTCACAGACAGGGTGTGTTCCACGTGGTTGGGAGTGGCTaGCAGGGCAGGCCGTGCAGTAGTGACAGGCCCCGAACTGCCATT +
Preference number: 5 (lower is better)
Translates to: VAAHRQGVFHVVGSG*QGRPCSSDRPRTAI
Trigger: AATGGCAGTTCGGGGCCTGTCACTACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGGAACACACCCTGTCTGTGAGCAGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 90 bp GAGGGGCAGCTGCGGAGGCTGGCTCCAGGTCCAGCATCAACATATTaGGGGTTTCGATGGACTGCTCGATCTCCTGCTGGGACGCTGCCC +
Preference number: 5 (lower is better)
Translates to: EGQLRRLAPGPASTY*GFRWTARSPAGTLP
Trigger: GGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GTGGAGTTGCCAGAGTCGCTGCTCACAGACAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGGGCAGGCCGTGCAGTAGTGACAGGC +
Preference number: 5 (lower is better)
Translates to: VELPESLLTDRVCST*LGVADRAGRAVVTG
Trigger: GCCTGTCACTACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGGAACACACCCTGTCTGTGAGCAGCGACTCTGGCAACTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp CGGATGCTGGAGTCCAGCATAGGCTGGAAGGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGATGGGAAACTGCCCACGGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RMLESSIGWKGVRGP*SLLTTDGKLPTEVL
Trigger: CAGCACTTCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACCCTTCCAGCCTATGCTGGACTCCAGCATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp ATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGGTCTTCTGGCTGGTCCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: MPQGFTFLKAFTLKW*VLGASRSSGWSRLA
Trigger: GGCCAGCCGGGACCAGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188208.2
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQLKWWV*GASRSS
Trigger: AGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTTGAAGGCCTTCACCTaGAAGTGGTGGGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPLKAFT*KWWVLG
Trigger: CCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACGGAAGTTCTCCTCATaGGCTGTGCTAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRRKFSS*AVLGKD
Trigger: GTCCTTCCCTAGCACAGCCAATGAGGAGAACTTCCG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGCCACTTCACGGAGGTaGCTGCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGGC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCGCCACTTCACGGAGGTaGCTGCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGGC...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACACAGGTTGCATGGCTaGGTAGATGCGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRHRLHG*VDAEKG
Trigger: CCCTTTCTCCGCATCTACCAAGCCATGCAACCTGTG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCCACTTTCACTGGTGTaGGTGACCCCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASPLSLV*VTPSRE
Trigger: CTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCACTTTCACTGGTGTaGGTGACCCCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPLSLV*VTPSRE
Trigger: CTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCCCACGGGTTGGAGCTaGGGGCAGCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSPTGWS*GQLGLH
Trigger: GTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACAGAGCTATGAGGGCTaGGAAGGAAGGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRQSYEG*EGRWKR
Trigger: CCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCAGAGCTATGAGGGCTaGGAAGGAAGGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGQSYEG*EGRWKR
Trigger: CCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRSAGQW*SWQGLS
Trigger: GCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGC +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASTLETK*TMADAG
Trigger: GCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGC +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRTLETK*TMADAG
Trigger: GCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp CCAGGGCTAGGTGGAGTGTTGGTACCCACTGTCCTGTGTCGTGCCTaGGGGCTCCCAGGTACCATGTGGACACTGGCCGCACTGTACTGT +
Preference number: 5 (lower is better)
Translates to: PGLGGVLVPTVLCRA*GLPGTMWTLAALYC
Trigger: ACAGTACAGTGCGGCCAGTGTCCACATGGTACCTGGGAGCCCTCAGGCACGACACAGGACAGTGGGTACCAACACTCCACCTAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 90 bp CACTGGCCATGCCATTGGCGACAGGCGAGGAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGAGGCTGCCTGCCCGGTCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: HWPCHWRQARKTLSH*WWHSWGGCLPGLPL
Trigger: CAGTGGGAGACCGGGCAGGCAGCCTCCCCAACTATGCCACCATCAATGGGAAAGTGTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp AACCCTCCTGAGCAGAGTAGGAGGGTCGAATGGGGGCCGAGTGACTaGTGTGGACAGGAATCACCCGGTTGGCAGCCTCATAGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: NPPEQSRRVEWGPSD*CGQESPGWQPHRGS
Trigger: GCTACCCCTATGAGGCTGCCAACCGGGTGATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCGACCCTCCTACTCTGCTCAGGAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GCTGGTAGCCAGCTAAACCCTCCTGAGCAGAGTAGGAGGGTCGAATaGGGGCCGAGTGACTGCTGTGGACAGGAATCACCCGGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGSQLNPPEQSRRVE*GPSDCCGQESPGWQ
Trigger: CTGCCAACCGGGTGATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCGACCCTCCTACTCTGCTCAGGAGGGTTTAGCTGGCTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGCCTTCACCTTGAAGTGGTGGGTCTTGGGGGCCTCCAGGTCTTCTaGCCTGCAGATGAAGAAGGGGAATGGCTGGACGGCTGGATCCAC +
Preference number: 5 (lower is better)
Translates to: GLHLEVVGLGGLQVF*PADEEGEWLDGWIH
Trigger: GTGGATCCAGCCGTCCAGCCATTCCCCTTCTTCATCTGCAGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191204.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATTGAAGGCCTTCACCTaGAAGTGGTGGGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGLKAFT*KWWVLG
Trigger: CCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACAGGGCTTCACCTTCTaGAAGGCCTTCACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRQGFTF*KAFTLK
Trigger: CTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAACCTTAGCATGCAGCTaGGTGATGTCAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRTLACS*VMSGLC
Trigger: ACAGAGGCCTGACATCACCAAGCTGCATGCTAAGGT...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPWRTTT*WGSALS
Trigger: GCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCA...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCACAGGTTGCATGGCTaGGTAGATGCGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASHRLHG*VDAEKG
Trigger: CCCTTTCTCCGCATCTACCAAGCCATGCAACCTGTG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGCCGGTACATGGCGCCTaGCTTTTCTCTATCCACACC +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRPVHGA*LFSIHT
Trigger: GGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCGG...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS GCA 90 bp TGGCCAGGCCCCAGGGACACTCTGGGACTTATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTCCAGCATCAACATATTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: WPGPRDTLGLMKRGS*GGWLQVQHQHIEGF
Trigger: GAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGTCCCTGGGGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp AAAACCAGGGCTAGGTGGAGTGTTGGTACCCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTACCATGTGGACACTGGAGGAGAGCGC +
Preference number: 5 (lower is better)
Translates to: KTRARWSVGTHCPVS*LRAPRYHVDTGGER
Trigger: GCGCTCTCCTCCAGTGTCCACATGGTACCTGGGAGCCCTCAGGCACGACACAGGACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189228.2
CDS CCA 90 bp GGAAAGGACTGGGATCTGAATAGACCACTGGGGTCACAGCCACAGTaGGCACTGGTCACTTGCTGTGACCAGGCTGGGTGGGGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GKDWDLNRPLGSQPQ*ALVTCCDQAGWGPS
Trigger: TGAGGGACCCCACCCAGCCTGGTCACAGCAAGTGACCAGTGCCCACTGTGGCTGTGACCCCAGTGGTCTATTCAGATCCCAGTCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp ACAGCCTCTCGGCTACTACCCCCACGGGTTGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAGGACTGGGATCTGAATAGACCACTG +
Preference number: 5 (lower is better)
Translates to: TASRLLPPRVGAWGS*GSTSGKDWDLNRPL
Trigger: CAGTGGTCTATTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGTAGCCGAGAGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp CTTCTGGCAACACCTGTGGGGTGCAGCAAGATGTCTGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: LLATPVGCSKMSAGL*GFRPRADRGVLARP
Trigger: AGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS CCA 90 bp CCCCCTCGTCTTCCTCTGGCTGGATCAGTCTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTGCTGGGTTGTGGGGTTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PPRLPLAGSVFWQHL*GAARCLLGCGVSGP
Trigger: TGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 90 bp GGCTGGGTGGCCAGAAACCACGTTACCATGGAAACCTGGACCAGATaGACCCATCACCTGCCGATGGCTCAAACTGGGACTACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GWVARNHVTMETWTR*THHLPMAQTGTTRG
Trigger: GCCCCTGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGATGGGGCCTGGTAGCCAGAGGCACTGCTTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGTAGAGTAGCCACCATAAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: GWGLVARGTALPGQC*SSVLRGRVATISCM
Trigger: CATGCAGCTTATGGTGGCTACTCTACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACCAGGCCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp CATAGCTCCGGGGCTCTGGCTGGATCAGTCTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTGCTGGGTTGTGGGGTTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: HSSGALAGSVFWQHL*GAARCLLGCGVSGP
Trigger: TGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGCCCCGGAGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185331.7
CDS CCA 90 bp TCGTCTTCCTCACCTGTGGGGTGCAGCAAGATGTCTGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTGGCCAGACCT +
Preference number: 5 (lower is better)
Translates to: SSSSPVGCSKMSAGL*GFRPRADRGVLARP
Trigger: AGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGAGGAAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212888.2
CDS CCA 90 bp ATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGGTCTTCTGGCTGGCTGCGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: MPQGFTFLKAFTLKW*VLGASRSSGWLRRQ
Trigger: CTGCCTTCGCAGCCAGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCGGAAGTTCTCCTCATaGGCTGTGCTAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRRKFSS*AVLGKD
Trigger: GTCCTTCCCTAGCACAGCCAATGAGGAGAACTTCCG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGACCTTAGCATGCAGCTaGGTGATGTCAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRTLACS*VMSGLC
Trigger: ACAGAGGCCTGACATCACCAAGCTGCATGCTAAGGT...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCCTCGGTTTCCCTTGTaGTGGAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPPRFPL*WRTTTL
Trigger: CAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCACCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: GLCVPCGSASLSEGGGAPPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...TGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCAC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGGTTTGTCCAGGCCATaGGTCAGTGGGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPGLSRP*VSGDRV
Trigger: GACCCTGTCCCCACTGACCAATGGCCTGGACAAACC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCTTTGCCGGGACAGTGTaGGTCTTCGGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAFAGTV*VFGPQG
Trigger: CCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAA...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCCACTGGCCATGCCATaGGCGACAGGCGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSPLAMP*ATGEED
Trigger: GTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGSLGQP*SFTPLG
Trigger: CCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS GCA 90 bp AAAACCAGGGCTAGGTGGAGTGTTGGTACCCACTGTCCTGTGTCGTaGCTGAGGGCTCCCAGGTACCATGTGGACACTGGCCGCACTGTA +
Preference number: 5 (lower is better)
Translates to: KTRARWSVGTHCPVS*LRAPRYHVDTGRTV
Trigger: TACAGTGCGGCCAGTGTCCACATGGTACCTGGGAGCCCTCAGGCACGACACAGGACAGTGGGTACCAACACTCCACCTAGCCCTGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp GAAACCACGTTACCATGGAAACCTGGACCAGATGGACCCATCACCTaGCGATGGCTCAAACTGGGACTACCAGGGGCAGCCATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ETTLPWKPGPDGPIT*RWLKLGLPGAAMVG
Trigger: CCCCACCATGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp TCCTTCTTCTTCACCTTGGCGTACAGGCTCCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCTTCCATGCCATCCTCACGATGCCCA +
Preference number: 5 (lower is better)
Translates to: SFFFTLAYRLPSSGP*VCPTTSSMPSSRCP
Trigger: TGGGCATCGTGAGGATGGCATGGAAGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGGCTCTTCTGGAGGCTTAGTCACCTCCTCCCCCTCGTCTTCCTCTaGCTGGATCAGTCTTCTGGCAACACCTGTGGGGTGCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GLFWRLSHLLPLVFL*LDQSSGNTCGVQQD
Trigger: ATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGGGAGGAGGTGACTAAGCCTCCAGAAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 90 bp ACGTTACCATGGAAACCTGGACCAGATGGACCCATCACCTGCCGATaGCTCAAACTGGGACTACCAGGGGCAGCCATGGTGGGGTTGACG +
Preference number: 5 (lower is better)
Translates to: TLPWKPGPDGPITCR*LKLGLPGAAMVGLT
Trigger: CGTCAACCCCACCATGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp ATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGGTCTTCTGGCCAGAGCATGCAGGAC +
Preference number: 5 (lower is better)
Translates to: MPQGFTFLKAFTLKW*VLGASRSSGQSMQD
Trigger: GTCCTGCATGCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS CCA 90 bp CAGATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTaGTGGGTCTTGGGGGCCTCCAGGTCTTCTGGCCAGAGCATGCAG +
Preference number: 5 (lower is better)
Translates to: QMPQGFTFLKAFTLK*WVLGASRSSGQSMQ
Trigger: CTGCATGCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCTTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECLWGSA*SQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAA...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAACCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCAC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCCACGGGTTGGAGCTaGGGGCAGCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPTGWS*GQLGLH
Trigger: GTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGAAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRKRLDF*DGNSGW
Trigger: CCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTT...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGTTTGCCGGGACAGTGTaGGTCTTCGGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QLAGEALGVWLPSIQGILFAGTV*VFGPQG
Trigger: CCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAA...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAGACTGGAGATCTCAGGCTaGTACCAATACTTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: PCGSASLSEGGGAPASWRLEISG*YQYLEV
Trigger: CACTTCCAAGTATTGGTACAAGCCTGAGATCTCCAG...TCTCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PRRPVCSLRERKSLRRGRGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...CCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGATTGACGAAGAGCACATaGCAAGCTGCTCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGLTKST*QAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAA...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATTGACGAAGAGCACATaGCAAGCTGCTCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQLTKST*QAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGC +
Preference number: 5 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLTLETK*TMADAG
Trigger: GCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp CTCCTTCCCCCACATCTACTACATTCTTGGGTACGGTCTCTGTGGTaGTGGGCACCAGTTCATGGCTGGACGGAGGAACGCAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPPHLLHSWVRSLW*WAPVHGWTEERKGQ
Trigger: CTGCCCCTTGCGTTCCTCCGTCCAGCCATGAACTGGTGCCCATCACCACAGAGACCGTACCCAAGAATGTAGTAGATGTGGGGGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000187281.7
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 90 bp CAGGAATCACCCGGTTGGCAGCCTCATAGGGGTAGCCTCCGCCGTTaGGCACAGGTTCTGTGGAATAGGGTTTGTCCAGGCCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: QESPGWQPHRGSLRR*AQVLWNRVCPGHWS
Trigger: TGACCAATGGCCTGGACAAACCCTATTCCACAGAACCTGTGCTCAACGGCGGAGGCTACCCCTATGAGGCTGCCAACCGGGTGATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp GAGAAGCTGCAGACTTTGCAAACACAGCCTTCCCGAGTGATGGCCTaGCGGCAGATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: EKLQTLQTQPSRVMA*RQMPQGFTFLKAFT
Trigger: GGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCATCACTCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp GCTGGCTCCAGGTCCAGCATCAACATATTGAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGACGCTGCCCTTGGGAACTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: AGSRSSINILRVSMD*SISCWDAALGNSGR
Trigger: TCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 90 bp TCGTCTTCCTCTGGCTGGATCAGTCTTCTGGCAACACCTGTGGGGTaGAGCAAGATGTCTGCTGGGTTGTGGGGTTTCAGGCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SSSSGWISLLATPVG*SKMSAGLWGFRPRA
Trigger: TGCTCTGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 90 bp GGAATAGGGTTTGTCCAGGCCATTGGTCAGTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGTGTTGGTGACCCCATCCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GIGFVQAIGQWGQGL*VATFTGVGDPIQGG
Trigger: TCCTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCACTGACCAATGGCCTGGACAAACCCTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp AGCATCAACATATTGAGGGTTTCGATGGACTGCTCGATCTCCTGCTaGGACGCTGCCCTTGGGAACTCTGGGAGAGCAGCTACGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SINILRVSMDCSISC*DAALGNSGRAATGV
Trigger: GACCCCCGTAGCTGCTCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATATGTTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp CCCAGGGACACTCTGGGACTTATGAAGAGGGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAACATATTGAGGGTTTCGATGGACTG +
Preference number: 5 (lower is better)
Translates to: PRDTLGLMKRGSCGG*LQVQHQHIEGFDGL
Trigger: CAGTCCATCGAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp AGCTGCACTGGCTGGGTGGCCAGAAACCACGTTACCATGGAAACCTaGACCAGATGGACCCATCACCTGCCGATGGCTCAAACTGGGACT +
Preference number: 5 (lower is better)
Translates to: SCTGWVARNHVTMET*TRWTHHLPMAQTGT
Trigger: AGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GGAGTGGTAGCTGCACTGGCTGGGTGGCCAGAAACCACGTTACCATaGAAACCTGGACCAGATGGACCCATCACCTGCCGATGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: GVVAALAGWPETTLP*KPGPDGPITCRWLK
Trigger: TTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGCTACCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCCGGAAGTTCTCCTCATaGGCTGTGCTAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPRKFSS*AVLGKD
Trigger: GTCCTTCCCTAGCACAGCCAATGAGGAGAACTTCCG...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGCCACTTCACGGAGGTaGCTGCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGGC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGGCTTGTTGTTCATTTaGATGGAGCCAGAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQGLLFI*MEPESR
Trigger: CCTACTCTCTGGCTCCATCAAAATGAACAACAAGCC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQSFFFT*AYRLPS
Trigger: GGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCAC...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGCCGGTACATGGCGCCTaGCTTTTCTCTATCCACACC +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQPVHGA*LFSIHT
Trigger: GGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCGG...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGCCCACGGGTTGGAGCTaGGGGCAGCTGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SNLTSREEASVRFLLSEQPTGWS*GQLGLH
Trigger: GTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGG...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTTCCAGCATCAACATATaGAGGGTTTCGATGGACTGC +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASSSINI*RVSMDC
Trigger: GCAGTCCATCGAAACCCTCAATATGTTGATGCTGGA...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGKRLDF*DGNSGW
Trigger: CCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASKRLDF*DGNSGW
Trigger: CCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTT...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTTTGCCGGGACAGTGTaGGTCTTCGGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQFAGTV*VFGPQG
Trigger: CCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTGGAGATCTCAGGCTaGTACCAATACTTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: NMVPRPQGGLCVPCGSASLEISG*YQYLEV
Trigger: CACTTCCAAGTATTGGTACAAGCCTGAGATCTCCAG...ACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTGGAAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: FPAGAQVSQKGEEPQLAGKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...TCCAGCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCG +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSVSDVA*EMACGP
Trigger: CGGGCCACAGGCCATTTCCAAAGCCACATCTGAGAC...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: RPVCSLRERKSLRRGRSPHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...GGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PPRRPVCSLRERKSLRRGHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...CCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS CCA 90 bp TCTTCTGGAGGCTTAGTCACCTCCTCCCCCTCGTCTTCCTCTGGCTaGATCAGTCTTCTGGCAACACCTGTGGGGTGCAGCAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: SSGGLVTSSPSSSSG*ISLLATPVGCSKMS
Trigger: AGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGGGAGGAGGTGACTAAGCCTCCAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 90 bp CGCACTGTACTGTGGCTGGCCTTGGCTTTCTGGAGAAGAGCTGAATaGTTGGAGGGAGTAGTCAGGGCTGTTGTAGCTGCTGCCACCAAC +
Preference number: 5 (lower is better)
Translates to: RTVLWLALAFWRRAE*LEGVVRAVVAAATN
Trigger: GTTGGTGGCAGCAGCTACAACAGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCAGGGCTTCACCTTCTaGAAGGCCTTCACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLQGFTF*KAFTLK
Trigger: CTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCCAGGGCTTCACCTTCTaGAAGGCCTTCACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAQGFTF*KAFTLK
Trigger: CTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTG...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCGGAAGTTCTCCTCATaGGCTGTGCTAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSRKFSS*AVLGKD
Trigger: GTCCTTCCCTAGCACAGCCAATGAGGAGAACTTCCG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCACCTTAGCATGCAGCTaGGTGATGTCAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPTLACS*VMSGLC
Trigger: ACAGAGGCCTGACATCACCAAGCTGCATGCTAAGGT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSLWGSA*SQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAAGGAAATCGATCATCTTaGAAGGCCTCATCCAGATCT +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQGNRSS*KASSRS
Trigger: AGATCTGGATGAGGCCTTCAAAGATGATCGATTTCC...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCCAGGTGTTCCATGCCTaGAATTTTCTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASQVFHA*NFLWSI
Trigger: TATGGACCAGAGAAAATTCAAGGCATGGAACACCTG...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCAGAGCTATGAGGGCTaGGAAGGAAGGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECQSYEG*EGRWKR
Trigger: CCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGTGTTCCCTGCGGGAGCGCAAGTCTCTCAGAAGGGGGAGGAGCCCCAGCTAGCTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: CVPCGSASLSEGGGAPASSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...GCTAGCTGGGGCTCCTCCCCCTTCTGAGAGACTTGCGCTCCCGCAGGGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCG +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSVSDVA*EMACGP
Trigger: CGGGCCACAGGCCATTTCCAAAGCCACATCTGAGAC...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS GCA 90 bp TGGATCCAGCTGGATGCAGCTGATAATCGTAAGGTGAATAAGGCCTaGCAGAAGAGACCAGCTCCGGGGTTCCCAGAGAATGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: WIQLDAADNRKVNKA*QKRPAPGFPENAHW
Trigger: CCAGTGGGCATTCTCTGGGAACCCCGGAGCTGGTCTCTTCTGGCAGGCCTTATTCACCTTACGATTATCAGCTGCATCCAGCTGGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GAGCACAGGTTCTGTGGAATAGGGTTTGTCCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTAGCCACTTTCACTGGTGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: EHRFCGIGFVQAIGQ*GQGLWVATFTGVGD
Trigger: GTCACCAACACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCACTGACCAATGGCCTGGACAAACCCTATTCCACAGAACCTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp AGGCCCCGCAGAGCTATGAGGGCTTGGAAGGAAGGTGGAAGAGGCTaGACTTTTTGGATGGAAACTCTGGTTGGATCCAGCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: RPRRAMRAWKEGGRG*TFWMETLVGSSWMQ
Trigger: CTGCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTACCTTAGCATGCAGCTaGGTGATGTCAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSTLACS*VMSGLC
Trigger: ACAGAGGCCTGACATCACCAAGCTGCATGCTAAGGT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGCCTCGGTTTCCCTTGTaGTGGAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQPRFPL*WRTTTL
Trigger: CAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GTTCTTCGGCAGCATTCCCAGAGGTGCTATGATGTCACCCTGAGCAGCCCAGCCCCTCGGTTTCCCTTGTaGTGGAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: VLRQHSQRCYDVTLSSPAPRFPL*WRTTTL
Trigger: CAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG...GGCTGGGCTGCTCAGGGTGACATCATAGCACCTCTGGGAATGCTGCCGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCACAGGTTGCATGGCTaGGTAGATGCGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQHRLHG*VDAEKG
Trigger: CCCTTTCTCCGCATCTACCAAGCCATGCAACCTGTG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGGAAATCGATCATCTTaGAAGGCCTCATCCAGATCT +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRGNRSS*KASSRS
Trigger: AGATCTGGATGAGGCCTTCAAAGATGATCGATTTCC...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSSFFFT*AYRLPS
Trigger: GGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PRDVLRRKHHLLASALVIVEAVE*PESLLT
Trigger: TGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCAC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCCACTTTCACTGGTGTaGGTGACCCCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSPLSLV*VTPSRE
Trigger: CTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTCAGAGCTATGAGGGCTaGGAAGGAAGGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSQSYEG*EGRWKR
Trigger: CCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTG...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGGGCGCCCTCCAGGATaGAGGGCAATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLGRPPG*RAMVRA
Trigger: GGCTCTTACCATTGCCCTCAATCCTGGAGGGCGCCC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PRDVLRRKHHLLASALVIGLMTA*LWRLEA
Trigger: GGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGGCCAGAGGCACTGCTTaGCCGGGACAGTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRARGTA*PGQCWS
Trigger: AGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGC...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCACTGGCCATGCCATaGGCGACAGGCGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPLAMP*ATGEED
Trigger: GTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCCACTGGCCATGCCATaGGCGACAGGCGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLPLAMP*ATGEED
Trigger: GTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRSAGQW*SWQGLS
Trigger: GCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGTTGACGAAGAGCACATaGCAAGCTGCTCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: HCSVKYGPPPPRRPVCSLLTKST*QAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAA...CAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTTGACGAAGAGCACATaGCAAGCTGCTCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPLTKST*QAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCG +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSVSDVA*EMACGP
Trigger: CGGGCCACAGGCCATTTCCAAAGCCACATCTGAGAC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: CSVKYGPPPPRRPVCSLRHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...CCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTAAGAGGTGGCAAGCGTaGTCTGTGGTGCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIKRWQA*SVVLPC
Trigger: GCAGGGCAGCACCACAGACAACGCTTGCCACCTCTT...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp GGACTATTGTCTGGCATCGAATACTTAGAAAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTGCTCCCACTGGCCATGCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: GLLSGIEYLEKSGSV*EKETVLLPLAMPLA
Trigger: CGCCAATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTTTTCTAAGTATTCGATGCCAGACAATAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp CCAATCCTGCCTCGGTTTCCCTTGTTGTGGAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAGGTGTCCATGGCCTTACAGACACTG +
Preference number: 5 (lower is better)
Translates to: PILPRFPLLWRTTTL*GSALSQVSMALQTL
Trigger: CAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGGCAGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp GCACATTGCAAGCTGCTCCTTGCTTCAGCAGGTCAGTGGTTGAGTTaGCAGGGCCTGAGCTATCTTTTGATTCATCTGTGGGGTCTCGGC +
Preference number: 5 (lower is better)
Translates to: AHCKLLLASAGQWLS*QGLSYLLIHLWGLG
Trigger: GCCGAGACCCCACAGATGAATCAAAAGATAGCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCATTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: ATSNLTSREEASVRFLLSLWGSA*SQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAA...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTCCTCGGTTTCCCTTGTaGTGGAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSPRFPL*WRTTTL
Trigger: CAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCTGCGGGAGCGCAATGCAGAAACAAAGGCTaGTTGTTCATTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: EIWSPAPKEACVFPAGAQCRNKG*LFILME
Trigger: CTCCATCAAAATGAACAACAAGCCTTTGTTTCTGCA...TTGCGCTCCCGCAGGGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTGGTTTGTCCAGGCCATaGGTCAGTGGGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: GKNTELHMECCVHVWSVCGLSRP*VSGDRV
Trigger: GACCCTGTCCCCACTGACCAATGGCCTGGACAAACC...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGGGCGCCCTCCAGGATaGAGGGCAATGGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCGRPPG*RAMVRA
Trigger: GGCTCTTACCATTGCCCTCAATCCTGGAGGGCGCCC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGCTGGAGATCTCAGGCTaGTACCAATACTTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQLEISG*YQYLEV
Trigger: CACTTCCAAGTATTGGTACAAGCCTGAGATCTCCAG...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGTCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQSLGQP*SFTPLG
Trigger: CCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGA...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVLWGSA*SQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSWRTTT*WGSALS
Trigger: GCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCA...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECHRISS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGCACAGGTTGCATGGCTaGGTAGATGCGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRHRLHG*VDAEKG
Trigger: CCCTTTCTCCGCATCTACCAAGCCATGCAACCTGTG...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCGGAAATCGATCATCTTaGAAGGCCTCATCCAGATCT +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPGNRSS*KASSRS
Trigger: AGATCTGGATGAGGCCTTCAAAGATGATCGATTTCC...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTCCGGTACATGGCGCCTaGCTTTTCTCTATCCACACC +
Preference number: 5 (lower is better)
Translates to: PRDVLRRKHHLLASALVIPVHGA*LFSIHT
Trigger: GGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCGG...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCCACTTTCACTGGTGTaGGTGACCCCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGPLSLV*VTPSRE
Trigger: CTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGGTTTGTCCAGGCCATaGGTCAGTGGGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: SNLTSREEASVRFLLSEQGLSRP*VSGDRV
Trigger: GACCCTGTCCCCACTGACCAATGGCCTGGACAAACC...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCTCCAGCATCAACATATaGAGGGTTTCGATGGACTGC +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSSSINI*RVSMDC
Trigger: GCAGTCCATCGAAACCCTCAATATGTTGATGCTGGA...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSKRLDF*DGNSGW
Trigger: CCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTTTTGCCGGGACAGTGTaGGTCTTCGGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCFAGTV*VFGPQG
Trigger: CCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAA...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAGCTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGCTGGAGATCTCAGGCTaGTACCAATACTTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: QLAGEALGVWLPSIQGILLEISG*YQYLEV
Trigger: CACTTCCAAGTATTGGTACAAGCCTGAGATCTCCAG...CAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVSAGQW*SWQGLS
Trigger: GCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTGGTTCTGGATTCAAGGTGGTCAGGATTCACAGGTCCCCTCCCCACACACCCTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: PGSGFKVVRIHRSPPHTPSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...GGGTGTGTGGGGAGGGGACCTGTGAATCCTGACCACCTTGAATCCAGAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGC +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSTLETK*TMADAG
Trigger: GCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS TCA 90 bp CATGGCTCGGCTCACACTCGTGTTTCTAGAGAGACTGGTAGGCTGTaGTTGTGGTTGTGGCTGTATGCTTGGAGAAACTCTCATGGAGCC +
Preference number: 5 (lower is better)
Translates to: HGSAHTRVSRETGRL*LWLWLYAWRNSHGA
Trigger: GGCTCCATGAGAGTTTCTCCAAGCATACAGCCACAACCACAATCACAGCCTACCAGTCTCTCTAGAAACACGAGTGTGAGCCGAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000187281.7
ENSMUST00000190389.7
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
CDS TCA 90 bp ACTGTCTTCCATGGCTCGGCTCACACTCGTGTTTCTGGTAGGCTGTaGTTGTGGTTGTGGCTGTATGCTTGGAGAAACTCTCATGGAGCC +
Preference number: 5 (lower is better)
Translates to: TVFHGSAHTRVSGRL*LWLWLYAWRNSHGA
Trigger: GGCTCCATGAGAGTTTCTCCAAGCATACAGCCACAACCACAATCACAGCCTACCAGAAACACGAGTGTGAGCCGAGCCATGGAAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187584.7
ENSMUST00000239451.2
CDS GCA 90 bp GCCTCGGTTTCCCTTGTTGTGGAGAACAACGACATTGTGGGGGTCTaGATTGAGCCAGGTGTCCATGGCCTTACAGACACTGCATATCTT +
Preference number: 5 (lower is better)
Translates to: ASVSLVVENNDIVGV*IEPGVHGLTDTAYL
Trigger: AAGATATGCAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRLKWWV*GASRSS
Trigger: AGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCACTTCACGGAGGTaGCTGCGGAAGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRATSRR*LRKFSS
Trigger: TGAGGAGAACTTCCGCAGCAACCTCCGTGAAGTGGC...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGACCTTAGCATGCAGCTaGGTGATGTCAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRTLACS*VMSGLC
Trigger: ACAGAGGCCTGACATCACCAAGCTGCATGCTAAGGT...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCCTCGGTTTCCCTTGTaGTGGAGAACAACGACATTG +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSPRFPL*WRTTTL
Trigger: CAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTGAGCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RTLTHTGCVALQWPRCCEHRISS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATG...CTCACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCHRISS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCCTTTAGACTCAAAGTaGGGGATGCCGTGCATGATC +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSPLDSK*GMPCMI
Trigger: GATCATGCACGGCATCCCCAACTTTGAGTCTAAAGG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTCCATTGCTCTGTGAAATATGGTCCCCCGCCCCCAAGGAGGCCTGTGTGTTCCCAGGTGTTCCATGCCTaGAATTTTCTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: FHCSVKYGPPPPRRPVCSQVFHA*NFLWSI
Trigger: TATGGACCAGAGAAAATTCAAGGCATGGAACACCTG...GGAACACACAGGCCTCCTTGGGGGCGGGGGACCATATTTCACAGAGCAATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTTCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSSFFFT*AYRLPS
Trigger: GGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGA...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCCGGTACATGGCGCCTaGCTTTTCTCTATCCACACC +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSPVHGA*LFSIHT
Trigger: GGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCGG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCCGGTACATGGCGCCTaGCTTTTCTCTATCCACACC +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLPVHGA*LFSIHT
Trigger: GGTGTGGATAGAGAAAAGCAAGGCGCCATGTACCGG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTAGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTTCCAGCATCAACATATaGAGGGTTTCGATGGACTGC +
Preference number: 5 (lower is better)
Translates to: LAGEALGVWLPSIQGILSSSINI*RVSMDC
Trigger: GCAGTCCATCGAAACCCTCAATATGTTGATGCTGGA...ACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRRRAEW*EGVVRA
Trigger: AGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCT...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGATTCAAGGTGGTCAGAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: LSFSTGDPKSWFWIQGGQKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...CTGACCACCTTGAATCCAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCTGGAGAGGCTTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: SWRGFGGVASIHTGDSECHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...GCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAAGCCTCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGC +
Preference number: 5 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCTLETK*TMADAG
Trigger: GCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGT...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS TCA 90 bp GGTTTCCCTTGTTGTGGAGAACAACGACATTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCTTACAGACACTGCATATCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GFPCCGEQRHCGGLH*ARCPWPYRHCISSP
Trigger: TGGAGAAGATATGCAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 90 bp ACTTCAGCAAGATGTCTCCCTTCAAGAGCAGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGCTGTCTCCAGGGATGTTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: TSARCLPSRAALVQW*YRCWPGCLQGCCKC
Trigger: GCATTTACAACATCCCTGGAGACAGCCAGGCCAGCATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAGGGAGACATCTTGCTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGAAGCTGCAGACTTaGCAAACACAGCCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: ATSNLTSREEASVRFLLSEKLQT*QTQPSR
Trigger: TCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCTC...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGAGAAGCTGCAGACTTaGCAAACACAGCCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGEKLQT*QTQPSR
Trigger: TCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCTC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTCGGAAGTTCTCCTCATaGGCTGTGCTAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVRKFSS*AVLGKD
Trigger: GTCCTTCCCTAGCACAGCCAATGAGGAGAACTTCCG...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGWRTTT*WGSALS
Trigger: GCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCA...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCGGCTTGTTGTTCATTTaGATGGAGCCAGAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSGLLFI*MEPESR
Trigger: CCTACTCTCTGGCTCCATCAAAATGAACAACAAGCC...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCAGCATGGGAAGGTGAAACCATACACGAAGGCCGATCCCAGGGCTGGATGCAGTGCAGAAACAAAGGCTaGTTGTTCATTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAWEGETIHEGRSQGWMQCRNKG*LFILME
Trigger: CTCCATCAAAATGAACAACAAGCCTTTGTTTCTGCA...CTGCATCCAGCCCTGGGATCGGCCTTCGTGTATGGTTTCACCTTCCCATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTGAGAACACTGACACACACTGGGTGTGTTGCTCTTCAGTGGCCTCGCTGCTGTCAGGTGTTCCATGCCTaGAATTTTCTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: LRTLTHTGCVALQWPRCCQVFHA*NFLWSI
Trigger: TATGGACCAGAGAAAATTCAAGGCATGGAACACCTG...ACAGCAGCGAGGCCACTGAAGAGCAACACACCCAGTGTGTGTCAGTGTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTTTCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: LPPEKKPQFDFFSQSRRVSFFFT*AYRLPS
Trigger: GGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGA...AACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGTTCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: GKNTELHMECCVHVWSVCSLGQP*SFTPLG
Trigger: CCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGA...ACACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCGATCTTCTTTCTAGCTCCTCAAACAATGTCCACACAGTCAATGCTCCCCGGTTGACGAAGAGCACATaGCAAGCTGCTCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: ADLLSSSSNNVHTVNAPRLTKST*QAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAA...CCGGGGAGCATTGACTGTGTGGACATTGTTTGAGGAGCTAGAAAGAAGATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGCACTCAGCATGACCTaGGAGACGAAGTTGACGATG +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGALSMT*ETKLTM
Trigger: CATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS CCA 90 bp CTTATGATAACACTTCAGCAAGATGTCTCCCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGATGCTGGCCTGGCTGTCTCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LMITLQQDVSLQEQP*FNGDTDAGLAVSRD
Trigger: ATCCCTGGAGACAGCCAGGCCAGCATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAGGGAGACATCTTGCTGAAGTGTTATCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 90 bp AGAGCTATGAGGGCTTGGAAGGAAGGTGGAAGAGGCTGGACTTTTTaGATGGAAACTCTGGTTGGATCCAGCTGGATGCAGCTGATAATC +
Preference number: 5 (lower is better)
Translates to: RAMRAWKEGGRGWTF*METLVGSSWMQLII
Trigger: GATTATCAGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFLKWWV*GASRSS
Trigger: AGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTGGTCTGTGTGAGAAGCTGCAGACTTaGCAAACACAGCCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: LARIQSCIWSAVCTCGLCEKLQT*QTQPSR
Trigger: TCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCTC...ACACAGACCACACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: SNLTSREEASVRFLLSEQWRTTT*WGSALS
Trigger: GCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCA...CTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTGGCTTGTTGTTCATTTaGATGGAGCCAGAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: PRDVLRRKHHLLASALVIGLLFI*MEPESR
Trigger: CCTACTCTCTGGCTCCATCAAAATGAACAACAAGCC...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TCATACGCTGGCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTGGCTTGTTGTTCATTTaGATGGAGCCAGAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: SYAGHQQPYLQRRSLSSIGLLFI*MEPESR
Trigger: CCTACTCTCTGGCTCCATCAAAATGAACAACAAGCC...AATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGCCAGCGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGCATGGAGGCAGGAGAGGGCTGAACCCCTTGGATGGATCTCCCCAAGATCTTGCAGAAACAAAGGCTaGTTGTTCATTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: KAWRQERAEPLGWISPRSCRNKG*LFILME
Trigger: CTCCATCAAAATGAACAACAAGCCTTTGTTTCTGCA...AGATCTTGGGGAGATCCATCCAAGGGGTTCAGCCCTCTCCTGCCTCCATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCAGGTGTTCCATGCCTaGAATTTTCTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSQVFHA*NFLWSI
Trigger: TATGGACCAGAGAAAATTCAAGGCATGGAACACCTG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCTAGAGACGTGCTGAGAAGGAAGCACCACTTGCTAGCATCTGCCTTGGTCATTAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PRDVLRRKHHLLASALVIKRLDF*DGNSGW
Trigger: CCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTT...AATGACCAAGGCAGATGCTAGCAAGTGGTGCTTCCTTCTCAGCACGTCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGATCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: HQQPYLQRRSLSSISSLRSLGQP*SFTPLG
Trigger: CCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGA...TCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCCCAAAGTTTGGCTCATaGGGACAACCCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PATLPPEKKPQFDFFSQSPKFGS*GQPLSF
Trigger: GAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGG...GCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTGGCCTGAGCTATCTTTaGATTCATCTGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGGLSYL*IHLWGL
Trigger: GAGACCCCACAGATGAATCAAAAGATAGCTCAGGCC...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp TTTGGGGGTGTGGCTTCCATCCATACAGGGGATTCTGAGTGCCTCTCTTCTTCCCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: FGGVASIHTGDSECLSSSHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...GGAAGAAGAGAGGCACTCAGAATCCCCTGTATGGATGGAAGCCACACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS CCA 90 bp GTCCTGGACAAACTTCACTTTAGCCCGAGTCTCCGGACTATTGTCTaGCATCGAATACTTAGAAAAGTCCGGAAGCGTGTGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: VLDKLHFSPSLRTIV*HRILRKVRKRVREG
Trigger: TCCTTCTCTCACACGCTTCCGGACTTTTCTAAGTATTCGATGCCAGACAATAGTCCGGAGACTCGGGCTAAAGTGAAGTTTGTCCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS-3UTR CAA 90 bp CTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGAGCAGGAGGGTCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LTSREEASVRFLLSEQEGHRISS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATG...ACCCTCCTGCTCTGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTCCAGCATCAACATATaGAGGGTTTCGATGGACTGC +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLSSINI*RVSMDC
Trigger: GCAGTCCATCGAAACCCTCAATATGTTGATGCTGGA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCTGGAGATCTCAGGCTaGTACCAATACTTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSLEISG*YQYLEV
Trigger: CACTTCCAAGTATTGGTACAAGCCTGAGATCTCCAG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp GCCACCAGCAACCTTACCTCCAGAGAAGAAGCCTCAGTTCGATTTCTTCTCTCAGGAAATCGATCATCTTaGAAGGCCTCATCCAGATCT +
Preference number: 5 (lower is better)
Translates to: ATSNLTSREEASVRFLLSGNRSS*KASSRS
Trigger: AGATCTGGATGAGGCCTTCAAAGATGATCGATTTCC...TGAGAGAAGAAATCGAACTGAGGCTTCTTCTCTGGAGGTAAGGTTGCTGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp CAACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTCAGGTGTTCCATGCCTaGAATTTTCTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: QHCTFFFPSPRATQSPGSQVFHA*NFLWSI
Trigger: TATGGACCAGAGAAAATTCAAGGCATGGAACACCTG...AGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFSLGQP*SFTPLG
Trigger: CCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGATTGCAAGCTGCTCCTaGCTTCAGCAGGTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: KEIFGKNTELHMECCVHVIASCS*LQQVSG
Trigger: ACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAAT...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFHRISS*QTGPEP
Trigger: AGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AACATTGCACTTTCTTCTTTCCTTCTCCACGGGCGACCCAAAGTCCTGGTTCTGTGCAGAAACAAAGGCTaGTTGTTCATTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: NIALSSFLLHGRPKVLVLCRNKG*LFILME
Trigger: CTCCATCAAAATGAACAACAAGCCTTTGTTTCTGCA...CAGAACCAGGACTTTGGGTCGCCCGTGGAGAAGGAAAGAAGAAAGTGCAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAGGAAATCTTTGGCAAGAATACAGAGTTGCATATGGAGTGCTGTGTGCACGTGTCCAGCATCAACATATaGAGGGTTTCGATGGACTGC +
Preference number: 5 (lower is better)
Translates to: KEIFGKNTELHMECCVHVSSINI*RVSMDC
Trigger: GCAGTCCATCGAAACCCTCAATATGTTGATGCTGGA...CACGTGCACACAGCACTCCATATGCAACTCTGTATTCTTGCCAAAGATTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTAAAGGGAACCAAAGTTaGGCTCATTGGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFKGNQS*AHWDNP
Trigger: AGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTT...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTCCATATCCACAGAGTaGACGAAGAGCACATTGCAA +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFSISTE*TKSTLQ
Trigger: TTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTCATCCACTTTCTTTCTaGTGGATCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFHPLSF*WIQVTE
Trigger: TTCTGTGACCTGGATCCACAAGAAAGAAAGTGGATG...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS-3UTR CAA 90 bp AAAAGATGCCATCCTTCCCAGCAGGTATTTTTCCCAAGACTGTGGGCATCATTTTGCAGAAACAAAGGCTaGTTGTTCATTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: KRCHPSQQVFFPRLWASFCRNKG*LFILME
Trigger: CTCCATCAAAATGAACAACAAGCCTTTGTTTCTGCA...AAATGATGCCCACAGTCTTGGGAAAAATACCTGCTGGGAAGGATGGCATCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000191104.7
CDS CCA 72 bp GTGGCGGCCAGGGGAGGGCACAGTCGGGCCCCCGCCTaGATGGGATCTGAGTTGCTGAGCCCGGTACATGGC +
Preference number: 6 (lower is better)
Translates to: VAARGGHSRAPA*MGSELLSPVHG
Trigger: GCCATGTACCGGGCTCAGCAACTCAGATCCCATCCAGGCGGGGGCCCGACTGTGCCCTCCCCTGGCCGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CTTGGCCAGACCTGGAGGAGAGCGCGCCACACTGTGTaGCGGGCTGCTTGGGGAGGTCCCCTCCATCTCCTC +
Preference number: 6 (lower is better)
Translates to: LGQTWRRARHTV*RAAWGGPLHLL
Trigger: GAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CAGGCCCAGAGCAGACAGGGGTGTCTTGGCCAGACCTaGAGGAGAGCGCGCCACACTGTGTGGCGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: QAQSRQGCLGQT*RRARHTVWRAA
Trigger: AGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp GCAGCTGGTGCGCTGAAGCTCTTAGGCTCAACGTCCTaGGCTCGAGGCCCTGCCACCGCTGTCCTCGCCACG +
Preference number: 6 (lower is better)
Translates to: AAGALKLLGSTS*ARGPATAVLAT
Trigger: CGTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAGGACGTTGAGCCTAAGAGCTTCAGCGCACCAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GACCTGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTaGTTGGGGAGGTCCCCTCCATCTCCTCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: DLEESAPHCVAG*LGRSPPSPQRP
Trigger: AGGCCTTTGAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GGGCTTCCAGGAACCACGGATCCAGACCCACCCAGGTaGCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACT +
Preference number: 6 (lower is better)
Translates to: GLPGTTDPDPPR*RPKLGLPGLMT
Trigger: AGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCACCTGGGTGGGTCTGGATCCGTGGTTCCTGGAAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CATGGCTGGACGGAGGAACGCAAGGGGCAGCCACCTTaGCAAACGAGGAGCCACTGGGTGGCAGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: HGWTEERKGQPP*QTRSHWVAGQG
Trigger: GCCCTGGCCTGCCACCCAGTGGCTCCTCGTTTGCAAAGGTGGCTGCCCCTTGCGTTCCTCCGTCCAGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187281.7
CDS CAA 90 bp TCTGCTGGGTTGTGGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTaGGCCAGACCTGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: SAGLWGFRPRADRGV*ARPGGERATLCGGL
Trigger: CAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCCAAGACACCCCTGTCTGCTCTGGGCCTGAAACCCCACAACCCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp CCCAGGTGCCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCCAGATTCCCTTGGTGGGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: PRCRPKLGLPGLMTA*LWRLEARFPWWAPG
Trigger: CCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCACCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp GGGAGGGCACAGTCGGGCCCCCGCCTGGATGGGATCTaGGTTGCTGAGCCCGGTACATGGCGCCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: GRAQSGPRLDGI*VAEPGTWRLAF
Trigger: AAAAGCAAGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCATCCAGGCGGGGGCCCGACTGTGCCCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp CTCCGGAGACTGGTTTTCATACTGTCCATCACTGGCTaGCCGCCTCCGGAGTGGGCCTGGGGGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LRRLVFILSITG*PPPEWAWGLCR
Trigger: CCTGCAGAGCCCCCAGGCCCACTCCGGAGGCGGGCAGCCAGTGATGGACAGTATGAAAACCAGTCTCCGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTGCTTaGGGAGGTCCCCTCCATCTCCTCAAAGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: WRRARHTVWRAA*GGPLHLLKGLL
Trigger: AAGGAGGCCTTTGAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GCTTCCCGGAGTGGTGACCACACTGCTGTGGAGGCCTaGAACTTGATGGCTTCCCACTGGGTGCCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ASRSGDHTAVEA*NLMASHWVPAQ
Trigger: CTGGGCCGGCACCCAGTGGGAAGCCATCAAGTTCCAGGCCTCCACAGCAGTGTGGTCACCACTCCGGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ATTCCCTTGGTGGGCACCAGGGTGTCGGCCCAGGCTTaGGCTTCCCGGAGTGGTGACCACACTGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: IPLVGTRVSAQA*ASRSGDHTAVE
Trigger: CTCCACAGCAGTGTGGTCACCACTCCGGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GCATTGCTGTGGAGACTGGAGGCCAGATTCCCTTGGTaGGCACCAGGGTGTCGGCCCAGGCTTGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: ALLWRLEARFPW*APGCRPRLGLP
Trigger: GGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TCTGGGAGAGCAGCTACGGGGGTCTCTGCTGACAGCTaGGGGCTAGGCTTGCTGCGGGCAAGACTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SGRAATGVSADS*GLGLLRARLCS
Trigger: ACTGCAGAGTCTTGCCCGCAGCAAGCCTAGCCCCCAGCTGTCAGCAGAGACCCCCGTAGCTGCTCTCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GATGGACTGCTCGATCTCCTGCTGGGACGCTGCCCTTaGGAACTCTGGGAGAGCAGCTACGGGGGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: DGLLDLLLGRCP*ELWESSYGGLC
Trigger: GCAGAGACCCCCGTAGCTGCTCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp AAGCTGCCTGAGCGGATGCTGGAGTCCAGCATAGGCTaGAAGGGTGTCCGGGGACCCTGGTCACTGCTCACC +
Preference number: 6 (lower is better)
Translates to: KLPERMLESSIG*KGVRGPWSLLT
Trigger: GGTGAGCAGTGACCAGGGTCCCCGGACACCCTTCCAGCCTATGCTGGACTCCAGCATCCGCTCAGGCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GGGCACAGTCGGGCCCCCGCCTGGATGGGATCTGAGTaGCTGAGCCCGGTACATGGCGCCTTGCTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: GHSRAPAWMGSE*LSPVHGALLFS
Trigger: AGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCATCCAGGCGGGGGCCCGACTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CGATGGACTGCTCGATCTCCTGCTGGGACGCTGCCCTaGGGAACTCTGGGAGAGCAGCTACGGGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: RWTARSPAGTLP*GTLGEQLRGSL
Trigger: CAGAGACCCCCGTAGCTGCTCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp GAGTTGCCAGAGTCGCTGCTCACAGACAGGGTGTGTTCCACGTGGTaGGGAGTGGCTGACAGGGCAGGCCGTGCAGTAGTGACAGGCCCC +
Preference number: 6 (lower is better)
Translates to: ELPESLLTDRVCSTW*GVADRAGRAVVTGP
Trigger: GGGGCCTGTCACTACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGGAACACACCCTGTCTGTGAGCAGCGACTCTGGCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp TGGCCAGACCTGGAGGAGAGCGCGCCACACTGTGTGGCGGGCTGCTaGGGGAGGTCCCCTCCATCTCCTCAAAGGCCTCCTTGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: WPDLEESAPHCVAGC*GRSPPSPQRPPCSY
Trigger: ATAGCTACAAGGAGGCCTTTGAGGAGATGGAGGGGACCTCCCCAAGCAGCCCGCCACACAGTGTGGCGCGCTCTCCTCCAGGTCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp AGGGCTGATGACTGCATTGCTGTGGAGACTGGAGGCCAGATTCCCTaGGTGGGCACCAGGGTGTCGGCCCAGGCTTGGGCTTCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: RADDCIAVETGGQIP*VGTRVSAQAWASRS
Trigger: ACTCCGGGAAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp TCCCGAGTGATGGCCTGCCGGCAGATGCCACAGGGCTTCACCTTCTaGAAGGCCTTCACCTTGAAGTGGTGGGTCTTGGGGGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRVMACRQMPQGFTF*KAFTLKWWVLGASR
Trigger: CCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCATCACTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GGTTTCGATGGACTGCTCGATCTCCTGCTGGGACGCTaGCCTTGGGAACTCTGGGAGAGCAGCTACGGGGGT +
Preference number: 6 (lower is better)
Translates to: GFDGLLDLLLGR*PWELWESSYGG
Trigger: ACCCCCGTAGCTGCTCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GAAGCTCTTAGGCTCAACGTCCTGAGCTCGAGGCCCTaGCACCGCTGTCCTCGCCACGGACTCCACATAGCT +
Preference number: 6 (lower is better)
Translates to: EALRLNVLSSRP*HRCPRHGLHIA
Trigger: AGCTATGTGGAGTCCGTGGCGAGGACAGCGGTGGCAGGGCCTCGAGCTCAGGACGTTGAGCCTAAGAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp CAGGGGTGTCTCGTGCCCATAGGCGTGAGCAGCTGGTaGGCTGAAGCTCTTAGGCTCAACGTCCTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: QGCLVPIGVSSW*AEALRLNVLSS
Trigger: CGAGCTCAGGACGTTGAGCCTAAGAGCTTCAGCGCACCAGCTGCTCACGCCTATGGGCACGAGACACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GTGCCGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTaGATTGCTGTGGAGACTGGAGGCCAGATTCCCTTG +
Preference number: 6 (lower is better)
Translates to: VPAQAWAPRADD*IAVETGGQIPL
Trigger: CAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CCAGAGTCGCTGCTCACAGACAGGGTGTGTTCCACGTaGTTGGGAGTGGCTGACAGGGCAGGCCGTGCAGTA +
Preference number: 6 (lower is better)
Translates to: PESLLTDRVCST*LGVADRAGRAV
Trigger: TACTGCACGGCCTGCCCTGTCAGCCACTCCCAACCACGTGGAACACACCCTGTCTGTGAGCAGCGACTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GAGTCCAGCATAGGCTGGAAGGGTGTCCGGGGACCCTaGTCACTGCTCACCACTGATGGGAAACTGCCCACG +
Preference number: 6 (lower is better)
Translates to: ESSIGWKGVRGP*SLLTTDGKLPT
Trigger: CGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACCCTTCCAGCCTATGCTGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ACTGCATTGCTGTGGAGACTGGAGGCCAGATTCCCTTaGTGGGCACCAGGGTGTCGGCCCAGGCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: TALLWRLEARFP*WAPGCRPRLGL
Trigger: AAGCCCAAGCCTGGGCCGACACCCTGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TGTCCTCGCCACGGACTCCACATAGCTCCGGGGCTCTaGCTGGATCAGTCTTCTGGCAACACCTGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: CPRHGLHIAPGL*LDQSSGNTCGV
Trigger: CACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGCCCCGGAGCTATGTGGAGTCCGTGGCGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185331.7
CDS CCA 72 bp AGGTCTTCTGGCCTGCAGATGAAGAAGGGGAATGGCTaGACGGCTGGATCCACTGACCTGGTCCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: RSSGLQMKKGNG*TAGSTDLVPAG
Trigger: GCCAGCCGGGACCAGGTCAGTGGATCCAGCCGTCCAGCCATTCCCCTTCTTCATCTGCAGGCCAGAAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191204.7
CDS CAA 72 bp CGGCCCAAGCTTGGGCTCCCAGGGCTGATGACTGCATaGCTGTGGAGACTGGAGGCCAGATTCCCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RPKLGLPGLMTA*LWRLEARFPWW
Trigger: CCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp GTGACAGGCCCCGAACTGCCATTCAGGGAATCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCCAGCGGCCCTTGGGTGTGTCCCACC +
Preference number: 6 (lower is better)
Translates to: VTGPELPFRESFFFT*AYRLPSSGPWVCPT
Trigger: GGTGGGACACACCCAAGGGCCGCTGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGATTCCCTGAATGGCAGTTCGGGGCCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp GTGGCAGCCGGTGTGGGGTCGGCAGCCAGAGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCGGTGAGTGACTCCATATCCACAGAG +
Preference number: 6 (lower is better)
Translates to: VAAGVGSAARVSDVA*EMACGPVSDSISTE
Trigger: CTCTGTGGATATGGAGTCACTCACCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGACTCTGGCTGCCGACCCCACACCGGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp TGCCGGCAGATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTaGAAGTGGTGGGTCTTGGGGGCCTCCAGGTCTTCTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: CRQMPQGFTFLKAFT*KWWVLGASRSSGLQ
Trigger: CTGCAGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191204.7
CDS CAA 90 bp TGCCGGCAGATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTaGAAGTGGTGGGTCTTGGGGGCCTCCAGGTCTTCTGGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: CRQMPQGFTFLKAFT*KWWVLGASRSSGQS
Trigger: GCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS TCA 72 bp ACAGTCGGGCCCCCGCCTGGATGGGATCTGAGTTGCTaGGCCCGGTACATGGCGCCTTGCTTTTCTCTATCC +
Preference number: 6 (lower is better)
Translates to: TVGPPPGWDLSC*ARYMAPCFSLS
Trigger: GGATAGAGAAAAGCAAGGCGCCATGTACCGGGCTCAGCAACTCAGATCCCATCCAGGCGGGGGCCCGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp CCCGGTTGGCAGCCTCATAGGGGTAGCCTCCGCCGTTaGGCACAGGTTCTGTGGAATAGGGTTTGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PGWQPHRGSLRR*AQVLWNRVCPG
Trigger: GCCTGGACAAACCCTATTCCACAGAACCTGTGCTCAACGGCGGAGGCTACCCCTATGAGGCTGCCAACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp GAAGGGTGTCCGGGGACCCTGGTCACTGCTCACCACTaGTGGGAAACTGCCCACGGAAGTGCTGTCAGCACT +
Preference number: 6 (lower is better)
Translates to: EGCPGTLVTAHH*WETAHGSAVST
Trigger: AGTGCTGACAGCACTTCCGTGGGCAGTTTCCCATCAGTGGTGAGCAGTGACCAGGGTCCCCGGACACCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp TCCAGGGAGGACAGCGTTCCCATGCTGCCCCCACTCTaGCCGTCCTGGATGGGCAGCTCATCATCTAGAATG +
Preference number: 6 (lower is better)
Translates to: SREDSVPMLPPL*PSWMGSSSSRM
Trigger: CATTCTAGATGATGAGCTGCCCATCCAGGACGGGCAGAGTGGGGGCAGCATGGGAACGCTGTCCTCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000191367.2
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp GAGCAGAGTAGGAGGGTCGAATGGGGGCCGAGTGACTaGTGTGGACAGGAATCACCCGGTTGGCAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: EQSRRVEWGPSD*CGQESPGWQPH
Trigger: ATGAGGCTGCCAACCGGGTGATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCGACCCTCCTACTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp AAAAGTCCGGAAGCGTGTGAGAGAAGGAGACGGTGCTaGTCCCACTGGCCATGCCATTGGCGACAGGCGAGG +
Preference number: 6 (lower is better)
Translates to: KSPEACERRRRC*SHWPCHWRQAR
Trigger: CCTCGCCTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CGGCTACTACCCCCACGGGTTGGAGCTTGGGGCAGCTaGGGCTCCACATCTGGAAAGGACTGGGATCTGAAT +
Preference number: 6 (lower is better)
Translates to: RLLPPRVGAWGS*GSTSGKDWDLN
Trigger: ATTCAGATCCCAGTCCTTTCCAGATGTGGAGCCCCAGCTGCCCCAAGCTCCAACCCGTGGGGGTAGTAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp ACCTTCTTGAAGGCCTTCACCTTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCTGGCTGGTCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: TFLKAFTLKWWV*GASRSSGWSRL
Trigger: CAGCCGGGACCAGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188208.2
CDS TCA 72 bp ACAGGGTCTCTGGGTAGCCACTTTCACTGGTGTTGGTaGCCCCATCCAGGGAGGACAGCGTTCCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: TGSLGSHFHWCW*PHPGRTAFPCC
Trigger: GCAGCATGGGAACGCTGTCCTCCCTGGATGGGGTCACCAACACCAGTGAAAGTGGCTACCCAGAGACCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000191367.2
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp TGCCATTGGCGACAGGCGAGGAAGACACTTTCCCATTaGTGGTGGCATAGTTGGGGAGGCTGCCTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: CHWRQARKTLSH*WWHSWGGCLPG
Trigger: ACCGGGCAGGCAGCCTCCCCAACTATGCCACCATCAATGGGAAAGTGTCTTCCTCGCCTGTCGCCAATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TTCACCTTGGCGTACAGGCTCCCATCCAGCGGCCCTTaGGTGTGTCCCACCACTTCTTCCATGCCATCCTCA +
Preference number: 6 (lower is better)
Translates to: FTLAYRLPSSGP*VCPTTSSMPSS
Trigger: TGAGGATGGCATGGAAGAAGTGGTGGGACACACCCAAGGGCCGCTGGATGGGAGCCTGTACGCCAAGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CAGCTAAACCCTCCTGAGCAGAGTAGGAGGGTCGAATaGGGGCCGAGTGACTGCTGTGGACAGGAATCACCC +
Preference number: 6 (lower is better)
Translates to: QLNPPEQSRRVE*GPSDCCGQESP
Trigger: GGGTGATTCCTGTCCACAGCAGTCACTCGGCCCCCATTCGACCCTCCTACTCTGCTCAGGAGGGTTTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ACACCTGTGGGGTGCAGCAAGATGTCTGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: TPVGCSKMSAGL*GFRPRADRGVL
Trigger: CAAGACACCCCTGTCTGCTCTGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS CCA 72 bp TGGAGGCTTAGTCACCTCCTCCCCCTCGTCTTCCTCTaGCTGGATCAGTCTTCTGGCAACACCTGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: WRLSHLLPLVFL*LDQSSGNTCGV
Trigger: CACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAGACGAGGGGGAGGAGGTGACTAAGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 72 bp TGGAAACCTGGACCAGATGGACCCATCACCTGCCGATaGCTCAAACTGGGACTACCAGGGGCAGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: WKPGPDGPITCR*LKLGLPGAAMV
Trigger: CACCATGGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GCTGCACTGGCTGGGTGGCCAGAAACCACGTTACCATaGAAACCTGGACCAGATGGACCCATCACCTGCCGA +
Preference number: 6 (lower is better)
Translates to: AALAGWPETTLP*KPGPDGPITCR
Trigger: TCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CTGGGGCTTCCAGGAGTGGTAGCTGCACTGGCTGGGTaGCCAGAAACCACGTTACCATGGAAACCTGGACCA +
Preference number: 6 (lower is better)
Translates to: LGLPGVVAALAG*PETTLPWKPGP
Trigger: TGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCCAGTGCAGCTACCACTCCTGGAAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp AAGCTTGGGCTCCCAGGGCTGATGACTGCATTGCTGTaGAGACTGGAGGCCAGATTCCCTTGGTGGGCACCA +
Preference number: 6 (lower is better)
Translates to: KLGLPGLMTALL*RLEARFPWWAP
Trigger: TGGTGCCCACCAAGGGAATCTGGCCTCCAGTCTCCACAGCAATGCAGTCATCAGCCCTGGGAGCCCAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GAAGCGTGTGAGAGAAGGAGACGGTGCTGCTCCCACTaGCCATGCCATTGGCGACAGGCGAGGAAGACACTT +
Preference number: 6 (lower is better)
Translates to: EACERRRRCCSH*PCHWRQARKTL
Trigger: AAGTGTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTCACACGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GGGGCTCTGGCTGGATCAGTCTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTGCTGGGTTGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: GALAGSVFWQHL*GAARCLLGCGV
Trigger: AACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185331.7
CDS CCA 72 bp GGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGGTCTTCTGGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: GFTFLKAFTLKW*VLGASRSSGWS
Trigger: GGACCAGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188208.2
CDS CCA 72 bp TCACCTGTGGGGTGCAGCAAGATGTCTGCTGGGTTGTaGGGTTTCAGGCCCAGAGCAGACAGGGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: SPVGCSKMSAGL*GFRPRADRGVL
Trigger: CAAGACACCCCTGTCTGCTCTGGGCCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTaGGTCTTGGGGGCCTCCAGGTCTTCTGGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: GFTFLKAFTLKW*VLGASRSSGQS
Trigger: GCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS CAA 72 bp ATGGCCTGCCGGCAGATGCCACAGGGCTTCACCTTCTaGAAGGCCTTCACCTTGAAGTGGTGGGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: MACRQMPQGFTF*KAFTLKWWVLG
Trigger: CCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CCCGAACTGCCATTCAGGGAATCCTTCTTCTTCACCTaGGCGTACAGGCTCCCATCCAGCGGCCCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: PELPFRESFFFT*AYRLPSSGPWV
Trigger: CACCCAAGGGCCGCTGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGATTCCCTGAATGGCAGTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GGGGCAGTGGTAGCCCCAGAGACTGGCTCATCGGTCTaGTCTGTCTTAGTGGAGGCTGTGGAGTTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GAVVAPETGSSV*SVLVEAVELPE
Trigger: CTCTGGCAACTCCACAGCCTCCACTAAGACAGACAAGACCGATGAGCCAGTCTCTGGGGCTACCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GGTGTGGGGTCGGCAGCCAGAGTCTCAGATGTGGCTTaGGAAATGGCCTGTGGCCCGGTGAGTGACTCCATA +
Preference number: 6 (lower is better)
Translates to: GVGSAARVSDVA*EMACGPVSDSI
Trigger: TATGGAGTCACTCACCGGGCCACAGGCCATTTCCAAAGCCACATCTGAGACTCTGGCTGCCGACCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp CAGGGCTTCACCTTCTTGAAGGCCTTCACCTTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCTGGCCAGAGCATGCAGGACAGACAA +
Preference number: 6 (lower is better)
Translates to: QGFTFLKAFTLKWWV*GASRSSGQSMQDRQ
Trigger: TTGTCTGTCCTGCATGCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS TCA 72 bp AGAAGCTGCAGACTTTGCAAACACAGCCTTCCCGAGTaGTGGCCTGCCGGCAGATGCCACAGGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: RSCRLCKHSLPE*WPAGRCHRASP
Trigger: AGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCATCACTCGGGAAGGCTGTGTTTGCAAAGTCTGCAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp CTGCGGAGGCTGGCTCCAGGTCCAGCATCAACATATTaGGGGTTTCGATGGACTGCTCGATCTCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LRRLAPGPASTY*GFRWTARSPAG
Trigger: CCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp TCAGTCAGTGTGATTCCTTGGGCAGAGACCTTGAAGTaGACAATGGTGGCAGCCGGTGTGGGGTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SVSVIPWAETLK*TMVAAGVGSAA
Trigger: GGCTGCCGACCCCACACCGGCTGCCACCATTGTTCACTTCAAGGTCTCTGCCCAAGGAATCACACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp CCCAGGGACACTCTGGGACTTATGAAGAGGGGCAGCTaGGGAGGCTGGCTCCAGGTCCAGCATCAACATATT +
Preference number: 6 (lower is better)
Translates to: PRDTLGLMKRGS*GGWLQVQHQHI
Trigger: AATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGTGTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp TTACCATGGAAACCTGGACCAGATGGACCCATCACCTaGCGATGGCTCAAACTGGGACTACCAGGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LPWKPGPDGPIT*RWLKLGLPGAA
Trigger: GGCTGCCCCTGGTAGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp TGTGAGAGAAGGAGACGGTGCTGCTCCCACTGGCCATaGCATTGGCGACAGGCGAGGAAGACACTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: CERRRRCCSHWP*HWRQARKTLSH
Trigger: ATGGGAAAGTGTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CCGAACTGCCATTCAGGGAATCCTTCTTCTTCACCTTaGCGTACAGGCTCCCATCCAGCGGCCCTTGGGTGT +
Preference number: 6 (lower is better)
Translates to: PNCHSGNPSSSP*RTGSHPAALGC
Trigger: ACACCCAAGGGCCGCTGGATGGGAGCCTGTACGCCAAGGTGAAGAAGAAGGATTCCCTGAATGGCAGTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CCCAGGTACCATGTGGACACTGGCCGCACTGTACTGTaGCTGGCCTTGGCTTTCTGGAGAAGAGCTGAATGG +
Preference number: 6 (lower is better)
Translates to: PRYHVDTGRTVL*LALAFWRRAEW
Trigger: CCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCCAGTGTCCACATGGTACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GGCTGGGTGGCCAGAAACCACGTTACCATGGAAACCTaGACCAGATGGACCCATCACCTGCCGATGGCTCAA +
Preference number: 6 (lower is better)
Translates to: GWVARNHVTMET*TRWTHHLPMAQ
Trigger: TTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGCCACCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CTGGTAGCCAGAGGCACTGCTTTGCCGGGACAGTGTTaGTCTTCGGTCCTCAGGGGTAGAGTAGCCACCATA +
Preference number: 6 (lower is better)
Translates to: LVARGTALPGQC*SSVLRGRVATI
Trigger: TATGGTGGCTACTCTACCCCTGAGGACCGAAGACCAACACTGTCCCGGCAAAGCAGTGCCTCTGGCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GAGAAGGAGACGGTGCTGCTCCCACTGGCCATGCCATaGGCGACAGGCGAGGAAGACACTTTCCCATTGATG +
Preference number: 6 (lower is better)
Translates to: EKETVLLPLAMP*ATGEEDTFPLM
Trigger: CATCAATGGGAAAGTGTCTTCCTCGCCTGTCGCCAATGGCATGGCCAGTGGGAGCAGCACCGTCTCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp TTCTGGCCAGCACTCAGCATGACCTTGGAGACGAAGTaGACGATGGCAGACGCAGGCTGGTTGGGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: FWPALSMTLETK*TMADAGWLGSS
Trigger: GCTTGACCCCAACCAGCCTGCGTCTGCCATCGTCAACTTCGTCTCCAAGGTCATGCTGAGTGCTGGCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp ACCTTCTTGAAGGCCTTCACCTTGAAGTGGTGGGTCTaGGGGGCCTCCAGGTCTTCTGGCCAGAGCATGCAG +
Preference number: 6 (lower is better)
Translates to: TFLKAFTLKWWV*GASRSSGQSMQ
Trigger: CTGCATGCTCTGGCCAGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187584.7
CDS CAA 90 bp GAGACTGGCTCATCGGTCTTGTCTGTCTTAGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACAGACAGGGTGTGTTCCACGTGGTTG +
Preference number: 6 (lower is better)
Translates to: ETGSSVLSVLVEAVE*PESLLTDRVCSTWL
Trigger: CAACCACGTGGAACACACCCTGTCTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCACTAAGACAGACAAGACCGATGAGCCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp ACGCAAGGGGCAGCCACCTTGGCCTGGCATTTCCGATaGCAGGAGAAGCTGCAGACTTTGCAAACACAGCCT +
Preference number: 6 (lower is better)
Translates to: TQGAATLAWHFR*QEKLQTLQTQP
Trigger: AGGCTGTGTTTGCAAAGTCTGCAGCTTCTCCTGTCATCGGAAATGCCAGGCCAAGGTGGCTGCCCCTTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp CAGACTTTGCAAACACAGCCTTCCCGAGTGATGGCCTaGCGGCAGATGCCACAGGGCTTCACCTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: QTLQTQPSRVMA*RQMPQGFTFLK
Trigger: CTTCAAGAAGGTGAAGCCCTGTGGCATCTGCCGGCAGGCCATCACTCGGGAAGGCTGTGTTTGCAAAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp TCTGGCTGGATCAGTCTTCTGGCAACACCTGTGGGGTaGAGCAAGATGTCTGCTGGGTTGTGGGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: SGWISLLATPVG*SKMSAGLWGFR
Trigger: CCTGAAACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
CDS GCA 72 bp ATGGTTGGAGGGAGTAGTCAGGGCTGTTGTAGCTGCTaGCACCAACAGGGACAGGCGAGGAGCTCTGATAAC +
Preference number: 6 (lower is better)
Translates to: MVGGSSQGCCSC*HQQGQARSSDN
Trigger: GTTATCAGAGCTCCTCGCCTGTCCCTGTTGGTGGCAGCAGCTACAACAGCCCTGACTACTCCCTCCAACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CCAAAAACAACCCCCAAGTCATGGATGGCACAGGTGTaGAACTGCACTCGGAAGATGACGTCTCGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: PKTTPKSWMAQV*NCTRKMTSRAG
Trigger: CCCGGCTCGAGACGTCATCTTCCGAGTGCAGTTCCACACCTGTGCCATCCATGACTTGGGGGTTGTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TTTGTCCAGGCCATTGGTCAGTGGGGACAGGGTCTCTaGGTAGCCACTTTCACTGGTGTTGGTGACCCCATC +
Preference number: 6 (lower is better)
Translates to: FVQAIGQWGQGL*VATFTGVGDPI
Trigger: GATGGGGTCACCAACACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCACTGACCAATGGCCTGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ATATTGAGGGTTTCGATGGACTGCTCGATCTCCTGCTaGGACGCTGCCCTTGGGAACTCTGGGAGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: ILRVSMDCSISC*DAALGNSGRAA
Trigger: AGCTGCTCTCCCAGAGTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp CTTCCTCTGGCTGGATCAGTCTTCTGGCAACACCTGTaGGGTGCAGCAAGATGTCTGCTGGGTTGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: LPLAGSVFWQHL*GAARCLLGCGV
Trigger: AACCCCACAACCCAGCAGACATCTTGCTGCACCCCACAGGTGTTGCCAGAAGACTGATCCAGCCAGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
CDS CCA 72 bp ACTGGCCGCACTGTACTGTGGCTGGCCTTGGCTTTCTaGAGAAGAGCTGAATGGTTGGAGGGAGTAGTCAGG +
Preference number: 6 (lower is better)
Translates to: TGRTVLWLALAF*RRAEWLEGVVR
Trigger: CCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ATGTGGACACTGGCCGCACTGTACTGTGGCTGGCCTTaGCTTTCTGGAGAAGAGCTGAATGGTTGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: MWTLAALYCGWP*LSGEELNGWRE
Trigger: CTCCCTCCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCCAGTGTCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GGTACCATGTGGACACTGGCCGCACTGTACTGTGGCTaGCCTTGGCTTTCTGGAGAAGAGCTGAATGGTTGG +
Preference number: 6 (lower is better)
Translates to: GTMWTLAALYCG*PWLSGEELNGW
Trigger: CCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGTGCGGCCAGTGTCCACATGGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp ATGCCACAGGGCTTCACCTTCTTGAAGGCCTTCACCTaGAAGTGGTGGGTCTTGGGGGCCTCCAGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: MPQGFTFLKAFT*KWWVLGASRSS
Trigger: AGAAGACCTGGAGGCCCCCAAGACCCACCACTTCAAGGTGAAGGCCTTCAAGAAGGTGAAGCCCTGTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CTGCCTCGGTTTCCCTTGTTGTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGCCAGGTGTCCATGGCC +
Preference number: 6 (lower is better)
Translates to: LPRFPLLWRTTT*WGSALSQVSMA
Trigger: GGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp TGGCTGGCCTTGGCTTTCTGGAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCTGTTGTAGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: WLALAFWRRAEW*EGVVRAVVAAA
Trigger: GGCAGCAGCTACAACAGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp ACTGTACTGTGGCTGGCCTTGGCTTTCTGGAGAAGAGCTGAATGGTaGGAGGGAGTAGTCAGGGCTGTTGTAGCTGCTGCCACCAACAGG +
Preference number: 6 (lower is better)
Translates to: TVLWLALAFWRRAEW*EGVVRAVVAAATNR
Trigger: CCTGTTGGTGGCAGCAGCTACAACAGCCCTGACTACTCCCTCCAACCATTCAGCTCTTCTCCAGAAAGCCAAGGCCAGCCACAGTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp CCACATCTACTACATTCTTGGGTACGGTCTCTGTGGTaGTGGGCACCAGTTCATGGCTGGACGGAGGAACGC +
Preference number: 6 (lower is better)
Translates to: PHLLHSWVRSLW*WAPVHGWTEER
Trigger: GCGTTCCTCCGTCCAGCCATGAACTGGTGCCCATCACCACAGAGACCGTACCCAAGAATGTAGTAGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000187281.7
ENSMUST00000187584.7
ENSMUST00000188208.2
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp AGGTCCAGCATCAACATATTGAGGGTTTCGATGGACTaGTCGATCTCCTGCTGGGACGCTGCCCTTGGGAAC +
Preference number: 6 (lower is better)
Translates to: RSSINILRVSMD*SISCWDAALGN
Trigger: GTTCCCAAGGGCAGCGTCCCAGCAGGAGATCGAGCAGTCCATCGAAACCCTCAATATGTTGATGCTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ACTCTGGGACTTATGAAGAGGGGCAGCTGCGGAGGCTaGCTCCAGGTCCAGCATCAACATATTGAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: TLGLMKRGSCGG*LQVQHQHIEGF
Trigger: GAAACCCTCAATATGTTGATGCTGGACCTGGAGCCAGCCTCCGCAGCTGCCCCTCTTCATAAGTCCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GAGGCCCCGCAGAGCTATGAGGGCTTGGAAGGAAGGTaGAAGAGGCTGGACTTTTTGGATGGAAACTCTGGT +
Preference number: 6 (lower is better)
Translates to: EAPQSYEGLEGR*KRLDFLDGNSG
Trigger: ACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTGCGGGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp GCCAGAAACCACGTTACCATGGAAACCTGGACCAGATaGACCCATCACCTGCCGATGGCTCAAACTGGGACT +
Preference number: 6 (lower is better)
Translates to: ARNHVTMETWTR*THHLPMAQTGT
Trigger: AGTCCCAGTTTGAGCCATCGGCAGGTGATGGGTCCATCTGGTCCAGGTTTCCATGGTAACGTGGTTTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000189228.2
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp TCATCGGTCTTGTCTGTCTTAGTGGAGGCTGTGGAGTaGCCAGAGTCGCTGCTCACAGACAGGGTGTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSVLSVLVEAVE*PESLLTDRVCS
Trigger: GGAACACACCCTGTCTGTGAGCAGCGACTCTGGCAACTCCACAGCCTCCACTAAGACAGACAAGACCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GCCTGTGGCCCGGTGAGTGACTCCATATCCACAGAGTaGACGAAGAGCACATTGCAAGCTGCTCCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: ACGPVSDSISTE*TKSTLQAAPCF
Trigger: GAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGAGTCACTCACCGGGCCACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp ACCCCAATCCTGCCTCGGTTTCCCTTGTTGTGGAGAACAACGACATaGTGGGGGTCTGCATTGAGCCAGGTGTCCATGGCCTTACAGACA +
Preference number: 6 (lower is better)
Translates to: TPILPRFPLLWRTTT*WGSALSQVSMALQT
Trigger: TGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGGCAGGATTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp AGATGTCTCCCTTCAAGAGCAGCCCTGGTTCAATGGTaGTACAGATGCTGGCCTGGCTGTCTCCAGGGATGT +
Preference number: 6 (lower is better)
Translates to: RCLPSRAALVQW*YRCWPGCLQGC
Trigger: ACATCCCTGGAGACAGCCAGGCCAGCATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAGGGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp TCTGGCATCGAATACTTAGAAAAGTCCGGAAGCGTGTaGGAGAAGGAGACGGTGCTGCTCCCACTGGCCATG +
Preference number: 6 (lower is better)
Translates to: SGIEYLEKSGSV*EKETVLLPLAM
Trigger: CATGGCCAGTGGGAGCAGCACCGTCTCCTTCTCTCACACGCTTCCGGACTTTTCTAAGTATTCGATGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp AGCTTCACTCCTCTAGGGCCTGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTCATGTCTTTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SFTPLGPVSIRK*LTSSWVMSFLP
Trigger: GGGCAAGAAAGACATGACCCATGAGCTGGTGAGGCACTTTCTGATCGAGACAGGCCCTAGAGGAGTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185331.7
CDS CCA 72 bp CCTCGGTTTCCCTTGTTGTGGAGAACAACGACATTGTaGGGGTCTGCATTGAGCCAGGTGTCCATGGCCTTA +
Preference number: 6 (lower is better)
Translates to: PRFPLLWRTTTL*GSALSQVSMAL
Trigger: TAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TTCTGTGGAATAGGGTTTGTCCAGGCCATTGGTCAGTaGGGACAGGGTCTCTGGGTAGCCACTTTCACTGGT +
Preference number: 6 (lower is better)
Translates to: FCGIGFVQAIGQ*GQGLWVATFTG
Trigger: ACCAGTGAAAGTGGCTACCCAGAGACCCTGTCCCCACTGACCAATGGCCTGGACAAACCCTATTCCACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp ACCAGGGCAGAAAGGGAACCAAAGTTTGGCTCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGGCCTGTCTCGATCAGAAAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: TRAEREPKFGSLGQP*SFTPLGPVSIRKCL
Trigger: GAGGCACTTTCTGATCGAGACAGGCCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTTCTGCCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp AGCACATTGCAAGCTGCTCCTTGCTTCAGCAGGTCAGTGGTTGAGTaGGCAGGGCCTGAGCTATCTTTTGATTCATCTGTGGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: STLQAAPCFSRSVVE*AGPELSFDSSVGSR
Trigger: CCGAGACCCCACAGATGAATCAAAAGATAGCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp TTGGAAATGGCCTGTGGCCCGGTGAGTGACTCCATATCCACAGAGTaGACGAAGAGCACATTGCAAGCTGCTCCTTGCTTCAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LEMACGPVSDSISTE*TKSTLQAAPCFSRS
Trigger: TGACCTGCTGAAGCAAGGAGCAGCTTGCAATGTGCTCTTCGTCAACTCTGTGGATATGGAGTCACTCACCGGGCCACAGGCCATTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS GCA 72 bp AGCTTCACTCCTCTAGGGCCTGTCTCGATCAGAAAGTaGCTCACCAGCTCATGGGTCATGTCTCCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: SFTPLGPVSIRK*LTSSWVMSPFL
Trigger: CAAGAAAGGAGACATGACCCATGAGCTGGTGAGGCACTTTCTGATCGAGACAGGCCCTAGAGGAGTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp ACACTTCAGCAAGATGTCTCCCTTCAAGAGCAGCCCTaGTTCAATGGTGATACAGATGCTGGCCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: TLQQDVSLQEQP*FNGDTDAGLAV
Trigger: GACAGCCAGGCCAGCATCTGTATCACCATTGAACCAGGGCTGCTCTTGAAGGGAGACATCTTGCTGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp AGGGCTTGGAAGGAAGGTGGAAGAGGCTGGACTTTTTaGATGGAAACTCTGGTTGGATCCAGCTGGATGCAG +
Preference number: 6 (lower is better)
Translates to: RAWKEGGRGWTF*METLVGSSWMQ
Trigger: CTGCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CAATGGGCACGATCTTGTCCTCATAGAATCTCTTCATaGCAAACCGGTCCAGAGCCTGGTCAGCACTGGCTG +
Preference number: 6 (lower is better)
Translates to: QWARSCPHRISS*QTGPEPGQHWL
Trigger: CAGCCAGTGCTGACCAGGCTCTGGACCGGTTTGCAATGAAGAGATTCTATGAGGACAAGATCGTGCCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp CGGTTTCCCTTGTTGTGGAGAACAACGACATTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCCTTACAGACACTGCATATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RFPLLWRTTTLWGSA*SQVSMALQTLHIFS
Trigger: GGAGAAGATATGCAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAAGGGAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp CGAAGAGCACATTGCAAGCTGCTCCTTGCTTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGCTATCTTTTGATTCATCTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RRAHCKLLLASAGQW*SWQGLSYLLIHLWG
Trigger: ACCCCACAGATGAATCAAAAGATAGCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAATGTGCTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp TGTTGTGGAGAACAACGACATTGTGGGGGTCTGCATTaGGCCAGGTGTCCATGGCCTTACAGACACTGCATA +
Preference number: 6 (lower is better)
Translates to: CCGEQRHCGGLH*ARCPWPYRHCI
Trigger: TATGCAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp AAGCTGCTCCTTGCTTCAGCAGGTCAGTGGTTGAGTTaGCAGGGCCTGAGCTATCTTTTGATTCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: KLLLASAGQWLS*QGLSYLLIHLW
Trigger: CCACAGATGAATCAAAAGATAGCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGCAAGGAGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp TTGTTGTGGAGAACAACGACATTGTGGGGGTCTGCATaGAGCCAGGTGTCCATGGCCTTACAGACACTGCAT +
Preference number: 6 (lower is better)
Translates to: LLWRTTTLWGSA*SQVSMALQTLH
Trigger: ATGCAGTGTCTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTGTTCTCCACAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp GAAAGGGAACCAAAGTTTGGCTCATTGGGACAACCCTaGAGCTTCACTCCTCTAGGGCCTGTCTCGATCAGA +
Preference number: 6 (lower is better)
Translates to: EREPKFGSLGQP*SFTPLGPVSIR
Trigger: TCTGATCGAGACAGGCCCTAGAGGAGTGAAGCTCAAGGGTTGTCCCAATGAGCCAAACTTTGGTTCCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 90 bp CAGAGCTATGAGGGCTTGGAAGGAAGGTGGAAGAGGCTGGACTTTTaGGATGGAAACTCTGGTTGGATCCAGCTGGATGCAGCTGATAAT +
Preference number: 6 (lower is better)
Translates to: QSYEGLEGRWKRLDF*DGNSGWIQLDAADN
Trigger: ATTATCAGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCACCTTCCTTCCAAGCCCTCATAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp CATTGCAAGCTGCTCCTTGCTTCAGCAGGTCAGTGGTaGAGTTGGCAGGGCCTGAGCTATCTTTTGATTCAT +
Preference number: 6 (lower is better)
Translates to: HCKLLLASAGQW*SWQGLSYLLIH
Trigger: ATGAATCAAAAGATAGCTCAGGCCCTGCCAACTCAACCACTGACCTGCTGAAGCAAGGAGCAGCTTGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS TCA 72 bp GCTCACACTCGTGTTTCTAGAGAGACTGGTAGGCTGTaGTTGTGGTTGTGGCTGTATGCTTGGAGAAACTCT +
Preference number: 6 (lower is better)
Translates to: AHTRVSRETGRL*LWLWLYAWRNS
Trigger: AGAGTTTCTCCAAGCATACAGCCACAACCACAATCACAGCCTACCAGTCTCTCTAGAAACACGAGTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000169786.8
ENSMUST00000187281.7
ENSMUST00000190389.7
ENSMUST00000191104.7
ENSMUST00000191204.7
ENSMUST00000212888.2
CDS CCA 72 bp AGTAGTGCACATATCTCCTCTGGGATGGCTGGCCAATaGGCACGATCTTGTCCTCATAGAATCTCTTCATTG +
Preference number: 6 (lower is better)
Translates to: SSAHISSGMAGQ*ARSCPHRISSL
Trigger: CAATGAAGAGATTCTATGAGGACAAGATCGTGCCCATTGGCCAGCCATCCCAGAGGAGATATGTGCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp TGGAAGAGGCTGGACTTTTTGGATGGAAACTCTGGTTaGATCCAGCTGGATGCAGCTGATAATCGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: WKRLDFLDGNSG*IQLDAADNRKV
Trigger: CACCTTACGATTATCAGCTGCATCCAGCTGGATCCAACCAGAGTTTCCATCCAAAAAGTCCAGCCTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CCA 72 bp AAACTTCACTTTAGCCCGAGTCTCCGGACTATTGTCTaGCATCGAATACTTAGAAAAGTCCGGAAGCGTGTG +
Preference number: 6 (lower is better)
Translates to: KLHFSPSLRTIV*HRILRKVRKRV
Trigger: CACACGCTTCCGGACTTTTCTAAGTATTCGATGCCAGACAATAGTCCGGAGACTCGGGCTAAAGTGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2
CDS CAA 72 bp TGGACAAACTTCACTTTAGCCCGAGTCTCCGGACTATaGTCTGGCATCGAATACTTAGAAAAGTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: WTNFTLARVSGL*SGIEYLEKSGS
Trigger: GCTTCCGGACTTTTCTAAGTATTCGATGCCAGACAATAGTCCGGAGACTCGGGCTAAAGTGAAGTTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000169786.8
ENSMUST00000185331.7
ENSMUST00000185702.7
ENSMUST00000187584.7
ENSMUST00000187691.7
ENSMUST00000191104.7
ENSMUST00000212888.2
ENSMUST00000239451.2