RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000015829

Ensembl transcript IDs: ENSMUST00000111669.9, ENSMUST00000192069.6, ENSMUST00000192457.2, ENSMUST00000193325.2

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATAAGACACCCCAGACAGTAGCCATGGGCCCGATTAGTACACACTaGGCCCTCAAAGATAGGAGAGGACAGGGAGACAGGGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: YKTPQTVAMGPISTH*ALKDRRGQGDREKA
Trigger: TGCCTTTTCCCTGTCTCCCTGTCCTCTCCTATCTTTGAGGGCCCAGTGTGTACTAATCGGGCCCATGGCTACTGTCTGGGGTGTCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp ACAGAAAAATGGCAAGCTAACCCCAATGTCACGATGCTCAGCAGGTaGTCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGG +
Preference number: 1 (lower is better)
Translates to: TEKWQANPNVTMLSR*SSAQEDSCLWLKAW
Trigger: CCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGCATCGTGACATTGGGGTTAGCTTGCCATTTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp CAGAATCATAAGAACTATGCTGCCTCCTGCCCTACTTCTCATAAGTaGTTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: QNHKNYAASCPTSHK*FSGHLGAGSTTLPL
Trigger: GAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAGAAGTAGGGCAGGAGGCAGCATAGTTCTTATGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 90 bp GGGAATGGCTCATACAACTTCCCCCATGATTCTTCTGAAGCCACTTaGACTGAGGATAGCCTGACTGGGTATAGAGCTAGAGACCTTCAG +
Preference number: 1 (lower is better)
Translates to: GNGSYNFPHDSSEAT*TEDSLTGYRARDLQ
Trigger: CTGAAGGTCTCTAGCTCTATACCCAGTCAGGCTATCCTCAGTGCAAGTGGCTTCAGAAGAATCATGGGGGAAGTTGTATGAGCCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp ATGAGGCGAGAGTTTGAGAAGCCGATGCTGATGATGTCTTTAATGTaGCCACTCACGTGGCTTTTGTGTTTCCACTGTGGGGCCTCTAAG +
Preference number: 1 (lower is better)
Translates to: MRREFEKPMLMMSLM*PLTWLLCFHCGASK
Trigger: CTTAGAGGCCCCACAGTGGAAACACAAAAGCCACGTGAGTGGCCACATTAAAGACATCATCAGCATCGGCTTCTCAAACTCTCGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp ACCCTTCCCCAAGTCTCACCACCAAAGAAAGTTATTACACGACAATaGTTTACGACGCACAGGGCACAGCTATTGCATGACCCAGGGCAA +
Preference number: 1 (lower is better)
Translates to: TLPQVSPPKKVITRQ*FTTHRAQLLHDPGQ
Trigger: TTGCCCTGGGTCATGCAATAGCTGTGCCCTGTGCGTCGTAAATCATTGTCGTGTAATAACTTTCTTTGGTGGTGAGACTTGGGGAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp ATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGGTTAGATaGTGGCTGTTTCTATTTCAAGATGCCAACTGGTTGGCACAGGTA +
Preference number: 1 (lower is better)
Translates to: ISPGGLLLVAQSLVR*WLFLFQDANWLAQV
Trigger: TACCTGTGCCAACCAGTTGGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp TGTCCCCTTTCCTCCAGTGGAGAGGACCTTCAGTGCTTAGTTGTATaGATGAAAGAAACCACCCAGGGAGGATGGATGAAAACCAAGCAT +
Preference number: 1 (lower is better)
Translates to: CPLSSSGEDLQCLVV*MKETTQGGWMKTKH
Trigger: ATGCTTGGTTTTCATCCATCCTCCCTGGGTGGTTTCTTTCATTCATACAACTAAGCACTGAAGGTCCTCTCCACTGGAGGAAAGGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp GGCCAAGAGGGAAGCAGTAAGTCAAAGAACTTCAGAAGTTTGTTCTaGGGGCCCAGTGGGATAATAAAAGAGAAGCTACAAGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: GQEGSSKSKNFRSLF*GPSGIIKEKLQASA
Trigger: GGCTGAGGCTTGTAGCTTCTCTTTTATTATCCCACTGGGCCCTCAGAACAAACTTCTGAAGTTCTTTGACTTACTGCTTCCCTCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp ACTCTTTCCAAAGGGACCCTCATGTGTACCAACACACACATCCTCTaGAAACCGAAGCCTCCTCTCATCCCTGTGACATCTCTTCTTATC +
Preference number: 1 (lower is better)
Translates to: TLSKGTLMCTNTHIL*KPKPPLIPVTSLLI
Trigger: GATAAGAAGAGATGTCACAGGGATGAGAGGAGGCTTCGGTTTTCAGAGGATGTGTGTGTTGGTACACATGAGGGTCCCTTTGGAAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 90 bp TGTCCAAAGACTGTGAGGTTTGCCAAGGACATTTGGACAATGGGATaGTGCAAGTGCACTGAAGTCATGCTTTGGTTGAGGAGTGACCTT +
Preference number: 1 (lower is better)
Translates to: CPKTVRFAKDIWTMG*CKCTEVMLWLRSDL
Trigger: AAGGTCACTCCTCAACCAAAGCATGACTTCAGTGCACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAACCTCACAGTCTTTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp ATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTaGGGGGAGGGGACATTTAGATATCTGGGAGCTTGCTCCAACTTT +
Preference number: 1 (lower is better)
Translates to: IRSDSHLFRDRVLGS*GEGTFRYLGACSNF
Trigger: AAAGTTGGAGCAAGCTCCCAGATATCTAAATGTCCCCTCCCCCCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 90 bp AAGCTCAGTGAAGGAAGAAGTGAAGCCAGTCAAGTCCAGAAGCTTTaGGAGAAGCTCCCTGTGGATTCTGAGAAGACAGTCTCTTCAAAG +
Preference number: 1 (lower is better)
Translates to: KLSEGRSEASQVQKL*EKLPVDSEKTVSSK
Trigger: CTTTGAAGAGACTGTCTTCTCAGAATCCACAGGGAGCTTCTCTCAAAGCTTCTGGACTTGACTGGCTTCACTTCTTCCTTCACTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 90 bp CCAAAGACTGTGAGGTTTGCCAAGGACATTTGGACAATGGGATGCTaGAAGTGCACTGAAGTCATGCTTTGGTTGAGGAGTGACCTTAAA +
Preference number: 1 (lower is better)
Translates to: PKTVRFAKDIWTMGC*KCTEVMLWLRSDLK
Trigger: TTTAAGGTCACTCCTCAACCAAAGCATGACTTCAGTGCACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAACCTCACAGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp AGTGATGACACAAAATCTTGTTCCATTTCAGCTCCCTTGATGAGGTaGGCTGTTCAGGCACATCCAGTTCCTTGGCTCTGCTTTCATAGA +
Preference number: 1 (lower is better)
Translates to: SDDTKSCSISAPLMR*AVQAHPVPWLCFHR
Trigger: TCTATGAAAGCAGAGCCAAGGAACTGGATGTGCCTGAACAGCCCACCTCATCAAGGGAGCTGAAATGGAACAAGATTTTGTGTCATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp GTGGATGGAGTTAGAAACATCATGAGAATGGTAGTGAGTTCAAGATaGCAGCCGCGTGGTCAATGTGACAGCAGCTTTACAAACTGGAAG +
Preference number: 1 (lower is better)
Translates to: VDGVRNIMRMVVSSR*QPRGQCDSSFTNWK
Trigger: CTTCCAGTTTGTAAAGCTGCTGTCACATTGACCACGCGGCTGCCATCTTGAACTCACTACCATTCTCATGATGTTTCTAACTCCATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp TTTTACAAATCAGTCTCCTGTACAAATGGGTCCTGGGTCCTGGTTTaGTCTGAGGTTAACAGAATCATAAGAACTATGCTGCCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: FYKSVSCTNGSWVLV*SEVNRIIRTMLPPA
Trigger: GGCAGGAGGCAGCATAGTTCTTATGATTCTGTTAACCTCAGACCAAACCAGGACCCAGGACCCATTTGTACAGGAGACTGATTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 90 bp GAGGGGACATTTAGATATCTGGGAGCTTGCTCCAACTTTCTCTGCTaGCATGTTGCTGTTGTTTTACAAATCAGTCTCCTGTACAAATGG +
Preference number: 1 (lower is better)
Translates to: EGTFRYLGACSNFLC*HVAVVLQISLLYKW
Trigger: CCATTTGTACAGGAGACTGATTTGTAAAACAACAGCAACATGGCAGCAGAGAAAGTTGGAGCAAGCTCCCAGATATCTAAATGTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 90 bp ATGTTGCTGTTGTTTTACAAATCAGTCTCCTGTACAAATGGGTCCTaGGTCCTGGTTTGGTCTGAGGTTAACAGAATCATAAGAACTATG +
Preference number: 1 (lower is better)
Translates to: MLLLFYKSVSCTNGS*VLVWSEVNRIIRTM
Trigger: CATAGTTCTTATGATTCTGTTAACCTCAGACCAAACCAGGACCCAGGACCCATTTGTACAGGAGACTGATTTGTAAAACAACAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 90 bp GAGGTGAAAAGTGATCTTCCCTCTCTGTCTTCAGAGGGACAGAAATaGAATCAAGGAGTTAAATGCAATGATTATCAAGCAATGGATAGA +
Preference number: 1 (lower is better)
Translates to: EVKSDLPSLSSEGQK*NQGVKCNDYQAMDR
Trigger: TCTATCCATTGCTTGATAATCATTGCATTTAACTCCTTGATTGCATTTCTGTCCCTCTGAAGACAGAGAGGGAAGATCACTTTTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCAAATCACGTGGGGGTaGGGAGATCACTCCGCTCAC +
Preference number: 2 (lower is better)
Translates to: LISDSVDIWELGAPLCPSQITWG*GDHSAH
Trigger: GTGAGCGGAGTGATCTCCCCACCCCCACGTGATTTG...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTATGGACATCTGGGAGCTaGGAGCACCACTTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLWTSGS*EHHFAP
Trigger: AGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCA...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGACGATGCTCAGCAGGTaGTCATCAGCCCAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLTMLSR*SSAQED
Trigger: GTCCTCCTGGGCTGATGATCACCTGCTGAGCATCGT...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTAAAACTTGGCACAGCTTaGGCAGGTGCTGCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLKLGTA*AGAAGK
Trigger: CTTTCCTGCAGCACCTGCCCAAGCTGTGCCAAGTTT...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGCCGATTAGTACACACTaGGCCCTCAAAGATAGGAGA +
Preference number: 2 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLPISTH*ALKDRR
Trigger: TCTCCTATCTTTGAGGGCCCAGTGTGTACTAATCGG...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp ACCCACACGCTCCCTGGTAGGTGCCCTCATTTCCACTCCTGTCCTTaGTCAGTGTCTGATACAAATGTGCTAGAAACAATACCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: THTLPGRCPHFHSCP*SVSDTNVLETIPFP
Trigger: GGGGAAGGGTATTGTTTCTAGCACATTTGTATCAGACACTGACAAAGGACAGGAGTGGAAATGAGGGCACCTACCAGGGAGCGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCCTCCTTCTCTTAGCTaGTTGAAGCCCATGATGGAT +
Preference number: 2 (lower is better)
Translates to: LISDSVDIWELGAPLCPSPPSLS*LKPMMD
Trigger: ATCCATCATGGGCTTCAAGCAGCTAAGAGAAGGAGG...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTAAGGCGCAGGGGTGAATaGATAGGCTCTTTAGATGAG +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLRRRGE*IGSLDE
Trigger: CTCATCTAAAGAGCCTATGCATTCACCCCTGCGCCT...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGGGCACAGCTATTGCATaGCCCAGGGCAAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLGTAIA*PRARFR
Trigger: TCTGAACCTTGCCCTGGGTCATGCAATAGCTGTGCC...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACAGGGAAAAGGCAGCTaGGAAACTTGGCACAGCTTG +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKQGKGS*ETWHSL
Trigger: CAAGCTGTGCCAAGTTTCTCAGCTGCCTTTTCCCTG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTAGCTCCCTGTGGATTCTaGGAAGACAGTCTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLAPCGF*EDSLFK
Trigger: TTTGAAGAGACTGTCTTCTCAGAATCCACAGGGAGC...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTGTAGCCCTGGGAAGATaGGAACTCAGTATAGAAACA +
Preference number: 2 (lower is better)
Translates to: LISDSVDIWELGAPLCPSVALGR*ELSIET
Trigger: TGTTTCTATACTGAGTTCTCATCTTCCCAGGGCTAC...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGATGAACTTGGACAGTTaGGCCAGGGTGTGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLMNLDS*ARVWWA
Trigger: TGCCCACCACACCCTGGCGCAACTGTCCAAGTTCAT...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGAGTCAGGTCTGTTTCTaGTCAGACCCACACGCTCCC +
Preference number: 2 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLSQVCF*SDPHAP
Trigger: GGGAGCGTGTGGGTCTGAGCAGAAACAGACCTGACT...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGCCAAGTAGTGCTGCCTaGTCCTCAGGGACAAAAGCA +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLPSSAA*SSGTKA
Trigger: TGCTTTTGTCCCTGAGGAGCAGGCAGCACTACTTGG...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp CAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTaGGTTAGATGGTGGCTGTTTCTATTTCAAGATGCCAACTGGTTG +
Preference number: 2 (lower is better)
Translates to: QVIISPGGLLLVAQS*VRWWLFLFQDANWL
Trigger: CAACCAGTTGGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGTTAACTGTCAGAATGTaGGAATCTTTAGCCCATTGC +
Preference number: 2 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLLTVRM*ESLAHC
Trigger: GCAATGGGCTAAAGATTCTCACATTCTGACAGTTAA...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACAAGGCCCAGAGATTTaGACAAACCCATCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKQGPEI*TNPSRA
Trigger: AGCCCTTGATGGGTTTGTTCAAATCTCTGGGCCTTG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAATTTTCTGGGATGGTGTaGTCACCTGGCCATAGTCAG +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKFSGMV*SPGHSQ
Trigger: CTGACTATGGCCAGGTGACCACACCATCCCAGAAAA...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTAGAGGTGACAGAAAAATaGCAAGCTAACCCCAATGTC +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLEVTEK*QANPNV
Trigger: GACATTGGGGTTAGCTTGCCATTTTTCTGTCACCTC...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp ACAGGGCACAGCTATTGCATGACCCAGGGCAAGGTTCAGACAGCTTaGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTAGGTCTAAT +
Preference number: 2 (lower is better)
Translates to: TGHSYCMTQGKVQTA*VTGVLNNGWVGRSN
Trigger: ATTAGACCTACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCCCTGGGTCATGCAATAGCTGTGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp GATATCTGGGAGCTTGCTCCAACTTTCTCTGCTGCCATGTTGCTGTaGTTTTACAAATCAGTCTCCTGTACAAATGGGTCCTGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: DIWELAPTFSAAMLL*FYKSVSCTNGSWVL
Trigger: CAGGACCCAGGACCCATTTGTACAGGAGACTGATTTGTAAAACAACAGCAACATGGCAGCAGAGAAAGTTGGAGCAAGCTCCCAGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGTTCCTTCAGATAGTCTaGATATGTTGTGAAGCACAT +
Preference number: 2 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLFLQIV*ICCEAH
Trigger: ATGTGCTTCACAACATATTCAGACTATCTGAAGGAA...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGGAGCATGTAGCCTGTaGGTCAGGCTCCAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVGACSL*VRLQGS
Trigger: GCTGCCTTGGAGCCTGACTCACAGGCTACATGCTCC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAAGTTTTCCTCCTCTGTaGGAAAAGAGGTGGGTGATC +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKSFPPL*EKRWVI
Trigger: GATCACCCACCTCTTTTCTCACAGAGGAGGAAAACT...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACCCGTTCAGTCATTCTaGGTCCCTTATGGGAATCTT +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKPVQSF*VPYGNL
Trigger: AAGATTCCCATAAGGGACTCAGAATGACTGAACGGG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGTCTTCTGAAGCCACTTaGACTGAGGATAGCCTGACT +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLSSEAT*TEDSLT
Trigger: AGTCAGGCTATCCTCAGTGCAAGTGGCTTCAGAAGA...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTAGGAGAGGATGGGGCTaGAAGAGAGGCCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVRRGWG*KRGHAS
Trigger: GGAGGCATGGCCTCTCTTCCAGCCCCATCCTCTCCT...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGAGAGAAGCTCCCTGTaGATTCTGAGAAGACAGTCT +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKERSSL*ILRRQS
Trigger: AGACTGTCTTCTCAGAATCCACAGGGAGCTTCTCTC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCCCTTATGGGAATCTTaGGTGATTAGGGTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWPLWES*VIRVGA
Trigger: GGCACCCACCCTAATCACCCAAGATTCCCATAAGGG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGTCCTGGGTCCTGGTTTaGTCTGAGGTTAACAGAATC +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLSWVLV*SEVNRI
Trigger: GATTCTGTTAACCTCAGACCAAACCAGGACCCAGGA...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTAATGATGTCTTTAATGTaGCCACTCACGTGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLMMSLM*PLTWLL
Trigger: CAAAAGCCACGTGAGTGGCCACATTAAAGACATCAT...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCAGATGGTGCCTAACTaGTCCCTGCTTCCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWQMVPN*SLLPSD
Trigger: ATCTGAAGGAAGCAGGGATCAGTTAGGCACCATCTG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTTTTAGCCCATTGCAATaGACTTGGACAGTTGCGCCA +
Preference number: 2 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGFSPLQ*TWTVAP
Trigger: TGGCGCAACTGTCCAAGTTCATTGCAATGGGCTAAA...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTAAGCTGGGGAAGGAATaGGGATTTCCTGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCKLGKE*GFPVWE
Trigger: TTCCCAAACAGGAAATCCTCATTCCTTCCCCAGCTT...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTCTTTGGAGTTCTAAATaGAATTTCCTCTGGCACTTT +
Preference number: 2 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFILWSSK*NFLWHF
Trigger: AAAGTGCCAGAGGAAATTGCATTTAGAACTCCAAAG...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGCCTTCACGGGGATTCTaGCTTTCCTTTAATTGCGAT +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLPSRGF*LSFNCD
Trigger: ATCGCAATTAAAGGAAAGCCAGAATCCCCGTGAAGG...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp TGCCAAAATGCTGTAGTATTATTAGGAGAGATGCATATGGGAGAGTaGGGGTGTGGAAGAAGCAAAGGCCAAGAGGGAAGCAGTAAGTCA +
Preference number: 2 (lower is better)
Translates to: CQNAVVLLGEMHMGE*GCGRSKGQEGSSKS
Trigger: TGACTTACTGCTTCCCTCTTGGCCTTTGCTTCTTCCACACCCCAACTCTCCCATATGCATCTCTCCTAATAATACTACAGCATTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp TGGCCCAGGCTTCCTGAGTACAATGTACCTACATCTCAACGAATCTaGTACTTTCTCTTCAGAGGCCATGGTAGTAACTTAGCCAATGAC +
Preference number: 2 (lower is better)
Translates to: WPRLPEYNVPTSQRI*YFLFRGHGSNLAND
Trigger: GTCATTGGCTAAGTTACTACCATGGCCTCTGAAGAGAAAGTACAAGATTCGTTGAGATGTAGGTACATTGTACTCAGGAAGCCTGGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp AGATTCCAGTCTTTGAGCTACAGCGCCATGAAAGGATGGGGCAAGTaGGCTCTCCCTCTTCAATCCTCTATAGCCTTTTGTTTGATTTCA +
Preference number: 2 (lower is better)
Translates to: RFQSLSYSAMKGWGK*ALPLQSSIAFCLIS
Trigger: TGAAATCAAACAAAAGGCTATAGAGGATTGAAGAGGGAGAGCCAACTTGCCCCATCCTTTCATGGCGCTGTAGCTCAAAGACTGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGGAAGGTTGGGTGAGCTaGTCTTTGAAGTTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: TQGGWMKTKHLCVALASLEGWVS*SLKFLS
Trigger: AGAAAGAAACTTCAAAGATCAGCTCACCCAACCTTC...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTGAAACAATCTTCATATaGTGGGGCATGCAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCETIFI*WGMQRG
Trigger: CCCTCTTTGCATGCCCCATCATATGAAGATTGTTTC...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTATTAGACAGAGACAGTaGTACTCCTCAGAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCIRQRQ*YSSEAV
Trigger: CACAGCTTCTGAGGAGTACCACTGTCTCTGTCTAAT...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAATCCTTTGTCAGTGTCTaGTACAAATGTGCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKSFVSV*YKCARN
Trigger: GTTTCTAGCACATTTGTATCAGACACTGACAAAGGA...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAATGCTGCAGGAAAGACTaGCTGGATTTTTATTTAAGG +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKCCRKD*LDFYLR
Trigger: CCTTAAATAAAAATCCAGTCAGTCTTTCCTGCAGCA...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGAATCTTTAGCCCATTaGAATGAACTTGGACAGTTG +
Preference number: 2 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKESLAH*NELGQL
Trigger: CAACTGTCCAAGTTCATTGCAATGGGCTAAAGATTC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACACAGGGCACAGCTATTaGATGACCCAGGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNTGHSY*MTQGKV
Trigger: AACCTTGCCCTGGGTCATGCAATAGCTGTGCCCTGT...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACAAAAGATTGTTTGGCTaGTGGCTGGCTGCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNKRLFG*WLAAQC
Trigger: GCACTGGGCAGCCAGCCACCAGCCAAACAATCTTTT...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTCCCCTTTCCTCCAGTaGAGAGGACCTTCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNSPFLQ*RGPSVL
Trigger: AAGCACTGAAGGTCCTCTCCACTGGAGGAAAGGGGA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACGGGAGAGTTGGGGTGTaGAAGAAGCAAAGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNGRVGV*KKQRPR
Trigger: TCTTGGCCTTTGCTTCTTCCACACCCCAACTCTCCC...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGAGTCTGAATATGTTGTaGAGCACATTACTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWSLNML*STLLLP
Trigger: GGGCAACAGTAATGTGCTTCACAACATATTCAGACT...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACCAGAGACAGGGGAGGTaGCAGAAAAATGGCAAGCTA +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNQRQGR*QKNGKL
Trigger: TAGCTTGCCATTTTTCTGTCACCTCCCCTGTCTCTG...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTTCTGATTCAACTGGGTaGAGAAACCAAGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVSDSTG*RNQGPE
Trigger: CTCTGGGCCTTGGTTTCTTCACCCAGTTGAATCAGA...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACCTTGATTCTAGGCAGTaGATCCATGGCAGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNLDSRQ*IHGSLW
Trigger: CCAGAGACTGCCATGGATTCACTGCCTAGAATCAAG...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTTCAGAGGGACAGAAATaGAATCAAGGAGTTAAATGC +
Preference number: 2 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCSEGQK*NQGVKC
Trigger: GCATTTAACTCCTTGATTGCATTTCTGTCCCTCTGA...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGAAGCTTTTCTGGGATaGTGTGGTCACCTGGCCATA +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVEAFLG*CGHLAI
Trigger: TATGGCCAGGTGACCACACCATCCCAGAAAAGCTTC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTATGTGGCCACTCACGTaGCTTTTGTGTTTCCACTGT +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVMWPLT*LLCFHC
Trigger: ACAGTGGAAACACAAAAGCCACGTGAGTGGCCACAT...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTTTCAGAAGTTTGTTCTaGGGGCCCAGTGGGATAATA +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVFRSLF*GPSGII
Trigger: TATTATCCCACTGGGCCCTCAGAACAAACTTCTGAA...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR GCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTGCTCCAACTTTCTCTaGTGCCATGTTGCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNCSNFL*CHVAVV
Trigger: AACAACAGCAACATGGCAGCAGAGAAAGTTGGAGCA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGGAAAATGTTTCTCATaGTCTCACCTCATTGAGGGG +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVGKCFS*SHLIEG
Trigger: CCCCTCAATGAGGTGAGACCATGAGAAACATTTTCC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp AGAATTGTTTCTGGGCTATTTCTTACTATTTCTGACAGTAATAGTTaGGGGCTGAGGGTTTCTCTGCAGCATAGCATGAGAAAACAAGCA +
Preference number: 2 (lower is better)
Translates to: RIVSGLFLTISDSNS*GLRVSLQHSMRKQA
Trigger: TGCTTGTTTTCTCATGCTATGCTGCAGAGAAACCCTCAGCCCCAAACTATTACTGTCAGAAATAGTAAGAAATAGCCCAGAAACAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACCTACAGGTTTCTCTGTaGGTTGTAAAAGCACTGACA +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNLQVSL*VVKALT
Trigger: TGTCAGTGCTTTTACAACCCACAGAGAAACCTGTAG...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp TGTTCTATTAAGTTAATAGAGGAGATCTTAGGAGCCAGGACCTTGTaGAATGGATATCCTGCAATAAATAGTCTTAAGCTGGGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: CSIKLIEEILGARTL*NGYPAINSLKLGKE
Trigger: TTCCTTCCCCAGCTTAAGACTATTTATTGCAGGATATCCATTCAACAAGGTCCTGGCTCCTAAGATCTCCTCTATTAACTTAATAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp AGATGTTCTATTAAGTTAATAGAGGAGATCTTAGGAGCCAGGACCTaGTTGAATGGATATCCTGCAATAAATAGTCTTAAGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: RCSIKLIEEILGART*LNGYPAINSLKLGK
Trigger: CTTCCCCAGCTTAAGACTATTTATTGCAGGATATCCATTCAACAAGGTCCTGGCTCCTAAGATCTCCTCTATTAACTTAATAGAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACAAGGAAAAGGAGAGGTaGATGGAGTTAGAAACATCA +
Preference number: 2 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNKEKER*MELETS
Trigger: TGATGTTTCTAACTCCATCCACCTCTCCTTTTCCTT...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 90 bp CTAGACATTCACAGGATATTTGCATTTTCTGCTGTTTGTAGTTGTTaGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAAC +
Preference number: 2 (lower is better)
Translates to: LDIHRIFAFSAVCSC*NTLITLPLQTLGSN
Trigger: GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACAAACAGCAGAAAATGCAAATATCCTGTGAATGTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR TCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGTATTTAAGGAGAAGCTaGAAGGTCATGGCTTCTATA +
Preference number: 2 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGYLRRS*KVMASI
Trigger: TATAGAAGCCATGACCTTTCAGCTTCTCCTTAAATA...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTCTTTTCTATTACAGATaGTTAAACCTAAAGGGGCAT +
Preference number: 2 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVLFYYR*LNLKGH
Trigger: ATGCCCCTTTAGGTTTAACCATCTGTAATAGAAAAG...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp CCCCAGACAGTAGCCATGGGCCCGATTAGTACACACTaGGCCCTCAAAGATAGGAGAGGACAGGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: PQTVAMGPISTH*ALKDRRGQGDR
Trigger: CCTGTCTCCCTGTCCTCTCCTATCTTTGAGGGCCCAGTGTGTACTAATCGGGCCCATGGCTACTGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTAATGAACTTGGACAGTaGCGCCAGGGTGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LISDSVDIWELGAPLCPSNELGQ*RQGVVG
Trigger: GCCCACCACACCCTGGCGCAACTGTCCAAGTTCATT...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp TGGCAAGCTAACCCCAATGTCACGATGCTCAGCAGGTaGTCATCAGCCCAGGAGGACTCTTGCTTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: WQANPNVTMLSR*SSAQEDSCLWL
Trigger: GAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGCATCGTGACATTGGGGTTAGCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp TCTGTTTCTGCTCAGACCCACACGCTCCCTGGTAGGTaGCCTCATTTCCACTCCTGTCCTTTGTCAGTGTCT +
Preference number: 3 (lower is better)
Translates to: SVSAQTHTLPGR*PHFHSCPLSVS
Trigger: AGACACTGACAAAGGACAGGAGTGGAAATGAGGGCACCTACCAGGGAGCGTGTGGGTCTGAGCAGAAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp CCTGCCCTACTTCTCATAAGTGATTCAGTGGACATCTaGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAA +
Preference number: 3 (lower is better)
Translates to: PALLLISDSVDI*ELGAPLCPSHQ
Trigger: TTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAGAAGTAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTCCAAGGCCCAGAGATTaGAACAAACCCATCAAGGGC +
Preference number: 3 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIPRPRD*NKPIKG
Trigger: GCCCTTGATGGGTTTGTTCAAATCTCTGGGCCTTGG...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACACAGGGCACAGCTATaGCATGACCCAGGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKHRAQL*HDPGQG
Trigger: ACCTTGCCCTGGGTCATGCAATAGCTGTGCCCTGTG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCATGGTCTCACCTCATaGAGGGGGTCAGTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: LISDSVDIWELGAPLCPSHGLTS*RGSVLF
Trigger: AAACAGAACTGACCCCCTCAATGAGGTGAGACCATG...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAAGGCAGCTGAGAAACTaGGCACAGCTTGGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKRQLRN*AQLGQV
Trigger: CACCTGCCCAAGCTGTGCCAAGTTTCTCAGCTGCCT...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTCCACTCACGTGGCTTTaGTGTTTCCACTGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCPLTWL*CFHCGA
Trigger: GGCCCCACAGTGGAAACACAAAAGCCACGTGAGTGG...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp AAGAACTATGCTGCCTCCTGCCCTACTTCTCATAAGTaGTTCAGTGGACATCTGGGAGCTGGGAGCACCACT +
Preference number: 3 (lower is better)
Translates to: KNYAASCPTSHK*FSGHLGAGSTT
Trigger: AGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAGAAGTAGGGCAGGAGGCAGCATAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp CACGACAATGATTTACGACGCACAGGGCACAGCTATTaGATGACCCAGGGCAAGGTTCAGACAGCTTTGGTA +
Preference number: 3 (lower is better)
Translates to: HDNDLRRTGHSY*MTQGKVQTALV
Trigger: TACCAAAGCTGTCTGAACCTTGCCCTGGGTCATGCAATAGCTGTGCCCTGTGCGTCGTAAATCATTGTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp CTTCCCTCCCTTTCCCCATGTCCTTCACGGGGATTCTaGCTTTCCTTTAATTGCGATGACTCACCAAGACCA +
Preference number: 3 (lower is better)
Translates to: LPSLSPCPSRGF*LSFNCDDSPRP
Trigger: TGGTCTTGGTGAGTCATCGCAATTAAAGGAAAGCCAGAATCCCCGTGAAGGACATGGGGAAAGGGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTaGGGGGAGGGGACATTTAGATATCTGGGAGCTTGC +
Preference number: 3 (lower is better)
Translates to: DSHLFRDRVLGS*GEGTFRYLGAC
Trigger: GCAAGCTCCCAGATATCTAAATGTCCCCTCCCCCCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp AAAGGGACCCTCATGTGTACCAACACACACATCCTCTaGAAACCGAAGCCTCCTCTCATCCCTGTGACATCT +
Preference number: 3 (lower is better)
Translates to: KGTLMCTNTHIL*KPKPPLIPVTS
Trigger: AGATGTCACAGGGATGAGAGGAGGCTTCGGTTTTCAGAGGATGTGTGTGTTGGTACACATGAGGGTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGCAGGAGGACTCTTGCTaGTGGCTCAAAGCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: TQGGWMKTKHLCVALASLQEDSC*WLKAWL
Trigger: TAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTG...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp AACTGTCAGAATGTGAGAATCTTTAGCCCATTGCAATaGACTTGGACAGTTGCGCCAGGGTGTGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: NCQNVRIFSPLQ*TWTVAPGCGGH
Trigger: ATGCCCACCACACCCTGGCGCAACTGTCCAAGTTCATTGCAATGGGCTAAAGATTCTCACATTCTGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp GAAGGAAGAAGTGAAGCCAGTCAAGTCCAGAAGCTTTaGGAGAAGCTCCCTGTGGATTCTGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: EGRSEASQVQKL*EKLPVDSEKTV
Trigger: GACTGTCTTCTCAGAATCCACAGGGAGCTTCTCTCAAAGCTTCTGGACTTGACTGGCTTCACTTCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp ACTGTGAGGTTTGCCAAGGACATTTGGACAATGGGATaGTGCAAGTGCACTGAAGTCATGCTTTGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: TVRFAKDIWTMG*CKCTEVMLWLR
Trigger: CCTCAACCAAAGCATGACTTCAGTGCACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAACCTCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp TCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTaGTTAGATGGTGGCTGTTTCTATTTCAAGATGCCA +
Preference number: 3 (lower is better)
Translates to: SAQEDSCLWLKA*LDGGCFYFKMP
Trigger: TGGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp TTGATGAGGTGGGCTGTTCAGGCACATCCAGTTCCTTaGCTCTGCTTTCATAGACATAATGGCTTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LMRWAVQAHPVP*LCFHRHNGFSF
Trigger: GAAGCTGAAGCCATTATGTCTATGAAAGCAGAGCCAAGGAACTGGATGTGCCTGAACAGCCCACCTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GAGTTTGAGAAGCCGATGCTGATGATGTCTTTAATGTaGCCACTCACGTGGCTTTTGTGTTTCCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: EFEKPMLMMSLM*PLTWLLCFHCG
Trigger: CCCACAGTGGAAACACAAAAGCCACGTGAGTGGCCACATTAAAGACATCATCAGCATCGGCTTCTCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp CACTGTCCAAAGACTGTGAGGTTTGCCAAGGACATTTaGACAATGGGATGCTGCAAGTGCACTGAAGTCATG +
Preference number: 3 (lower is better)
Translates to: HCPKTVRFAKDI*TMGCCKCTEVM
Trigger: CATGACTTCAGTGCACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAACCTCACAGTCTTTGGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTaGGAGGTGGTCGTGTTAATTTTCCCTGCAATCTGT +
Preference number: 3 (lower is better)
Translates to: MSCHVPSGNSGI*EVVVLIFPAIC
Trigger: ACAGATTGCAGGGAAAATTAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp TGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTaGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: WAPGNFYRLEGT*GLCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACCCTCTTACAGAAGGTaGGGTGAGCTGATCTTTGAA +
Preference number: 3 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKPSYRR*GELIFE
Trigger: TTCAAAGATCAGCTCACCCAACCTTCTGTAAGAGGG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACGCTGGGAGCACCACTTaGCCCCTCTCACCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNAGSTT*PLSPSL
Trigger: GAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGC...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGCTGCCATGTTGCTGTaGTTTTACAAATCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKAAMLL*FYKSVS
Trigger: GGAGACTGATTTGTAAAACAACAGCAACATGGCAGC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp AAAGAGAGGCAGGAAGGACTAGACTCTTACAGATTCTaGCCCTTGTTTGTGAGTCCCTGTAGCATCGCTATG +
Preference number: 3 (lower is better)
Translates to: KERQEGLDSYRF*PLFVSPCSIAM
Trigger: CATAGCGATGCTACAGGGACTCACAAACAAGGGTCAGAATCTGTAAGAGTCTAGTCCTTCCTGCCTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp TTTGCCAAGGACATTTGGACAATGGGATGCTGCAAGTaGACTGAAGTCATGCTTTGGTTGAGGAGTGACCTT +
Preference number: 3 (lower is better)
Translates to: FAKDIWTMGCCK*TEVMLWLRSDL
Trigger: AAGGTCACTCCTCAACCAAAGCATGACTTCAGTGCACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GGACTCTTGCTTGTGGCTCAAAGCTTGGTTAGATGGTaGCTGTTTCTATTTCAAGATGCCAACTGGTTGGCA +
Preference number: 3 (lower is better)
Translates to: GLLLVAQSLVRW*LFLFQDANWLA
Trigger: TGCCAACCAGTTGGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GGAGGACTCTTGCTTGTGGCTCAAAGCTTGGTTAGATaGTGGCTGTTTCTATTTCAAGATGCCAACTGGTTG +
Preference number: 3 (lower is better)
Translates to: GGLLLVAQSLVR*WLFLFQDANWL
Trigger: CAACCAGTTGGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp CCAGTCAAGTCCAGAAGCTTTGAGAGAAGCTCCCTGTaGATTCTGAGAAGACAGTCTCTTCAAAGCATAGAG +
Preference number: 3 (lower is better)
Translates to: PVKSRSFERSSL*ILRRQSLQSIE
Trigger: CTCTATGCTTTGAAGAGACTGTCTTCTCAGAATCCACAGGGAGCTTCTCTCAAAGCTTCTGGACTTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTCAGAGAACTCCTCTCTaGACTTCTTGTAGTTCCAGT +
Preference number: 3 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCQRTPL*TSCSSS
Trigger: ACTGGAACTACAAGAAGTCAAGAGAGGAGTTCTCTG...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp TCTGGGATGGTGTGGTCACCTGGCCATAGTCAGTGGTaGCCAGATTACTATTACTTAGAACTTGGAAGGTAT +
Preference number: 3 (lower is better)
Translates to: SGMVWSPGHSQW*PDYYYLELGRY
Trigger: ATACCTTCCAAGTTCTAAGTAATAGTAATCTGGTCACCACTGACTATGGCCAGGTGACCACACCATCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp GTGCCCTCATTTCCACTCCTGTCCTTTGTCAGTGTCTaGTACAAATGTGCTAGAAACAATACCCTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: VPSFPLLSFVSV*YKCARNNTLPQ
Trigger: TTGGGGAAGGGTATTGTTTCTAGCACATTTGTATCAGACACTGACAAAGGACAGGAGTGGAAATGAGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp AAACTCCACCTGTGTTTTTGGCCTTGTGTAGGTCAGTaGTTCTATATCACAGAGACAGGGGAGGTGACAGAA +
Preference number: 3 (lower is better)
Translates to: KLHLCFWPCVGQ*FYITETGEVTE
Trigger: TTCTGTCACCTCCCCTGTCTCTGTGATATAGAATCACTGACCTACACAAGGCCAAAAACACAGGTGGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp TGTATATGGTGTGTGTGTGTGTGTGTGTGGTGTCTATaGGAGACACAGAGAGTTCTGAGTCAGTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: CIWCVCVCVWCL*ETQRVLSQSLS
Trigger: GGAAAGAGACTGACTCAGAACTCTCTGTGTCTCTCATAGACACCACACACACACACACACACACCATATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GACAAAAGCAGGCGTGAGAAGGAGCAGATTAACAACTaGAATCAGTTAGGAAGCTCAGTGAAGGAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: DKSRREKEQINN*NQLGSSVKEEV
Trigger: CACTTCTTCCTTCACTGAGCTTCCTAACTGATTCCAGTTGTTAATCTGCTCCTTCTCACGCCTGCTTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp TCAGTCTCCTGTACAAATGGGTCCTGGGTCCTGGTTTaGTCTGAGGTTAACAGAATCATAAGAACTATGCTG +
Preference number: 3 (lower is better)
Translates to: SVSCTNGSWVLV*SEVNRIIRTML
Trigger: CAGCATAGTTCTTATGATTCTGTTAACCTCAGACCAAACCAGGACCCAGGACCCATTTGTACAGGAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp GTTAGAAACATCATGAGAATGGTAGTGAGTTCAAGATaGCAGCCGCGTGGTCAATGTGACAGCAGCTTTACA +
Preference number: 3 (lower is better)
Translates to: VRNIMRMVVSSR*QPRGQCDSSFT
Trigger: TGTAAAGCTGCTGTCACATTGACCACGCGGCTGCCATCTTGAACTCACTACCATTCTCATGATGTTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTGTCTCTGGTGACTGGTaGTTACTGTTATTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCVSGDW*LLLLLL
Trigger: CAACAACAATAACAGTAACAACCAGTCACCAGAGAC...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTGTGGTCTCTCCTTCCTaGATACTGGTTCTATCTTTT +
Preference number: 3 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCVVSPS*ILVLSF
Trigger: AAAAGATAGAACCAGTATCAAGGAAGGAGAGACCAC...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTCTCATAACTCTTCCTTaGCAAACTCTAGGGTCAAAC +
Preference number: 3 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCLITLP*QTLGSN
Trigger: GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAG...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp CTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTaGTACCCTAGGTGCTTACACAGTGTTATCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LITLPLQTLGSN*YPRCLHSVILW
Trigger: CCACAGGATAACACTGTGTAAGCACCTAGGGTATCAGTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp GAAGAAAACATAACACTGTCCAAAGACTGTGAGGTTTaGCAAGGACATTTGGACAATGGGATGCTGCAAGTG +
Preference number: 3 (lower is better)
Translates to: EENITLSKDCEV*QGHLDNGMLQV
Trigger: CACTTGCAGCATCCCATTGTCCAAATGTCCTTGGCAAACCTCACAGTCTTTGGACAGTGTTATGTTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTCAAGTCCAGAAGCTTaGAGAGAAGCTCCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNSSPEA*REAPCG
Trigger: TCCACAGGGAGCTTCTCTCAAAGCTTCTGGACTTGA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp ATTAGACAGAGACAGTGGTACTCCTCAGAAGCTGTGTaGCTTCACACATGCCATTTAACAATCCCATGCTTT +
Preference number: 3 (lower is better)
Translates to: IRQRQWYSSEAV*LHTCHLTIPCF
Trigger: AAAGCATGGGATTGTTAAATGGCATGTGTGAAGTCACACAGCTTCTGAGGAGTACCACTGTCTCTGTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGTCACCAAGACCAACTTaGATTCTGCTTTTCTATTAC +
Preference number: 3 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLSPRPT*ILLFYY
Trigger: GTAATAGAAAAGCAGAATCAAAGTTGGTCTTGGTGA...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTTAGGAGCCAGGACCTaGTTGAATGGATATCCTGCA +
Preference number: 3 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNLGART*LNGYPA
Trigger: TGCAGGATATCCATTCAACAAGGTCCTGGCTCCTAA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR TCA 72 bp GGAAGCAGTAAGTCAAAGAACTTCAGAAGTTTGTTCTaGGGGCCCAGTGGGATAATAAAAGAGAAGCTACAA +
Preference number: 3 (lower is better)
Translates to: GSSKSKNFRSLF*GPSGIIKEKLQ
Trigger: TTGTAGCTTCTCTTTTATTATCCCACTGGGCCCTCAGAACAAACTTCTGAAGTTCTTTGACTTACTGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp ACATTTAGATATCTGGGAGCTTGCTCCAACTTTCTCTaGTGCCATGTTGCTGTTGTTTTACAAATCAGTCTC +
Preference number: 3 (lower is better)
Translates to: TFRYLGACSNFL*CHVAVVLQISL
Trigger: GAGACTGATTTGTAAAACAACAGCAACATGGCAGCAGAGAAAGTTGGAGCAAGCTCCCAGATATCTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CCA 72 bp TTGTTTTACAAATCAGTCTCCTGTACAAATGGGTCCTaGGTCCTGGTTTGGTCTGAGGTTAACAGAATCATA +
Preference number: 3 (lower is better)
Translates to: LFYKSVSCTNGS*VLVWSEVNRII
Trigger: TATGATTCTGTTAACCTCAGACCAAACCAGGACCCAGGACCCATTTGTACAGGAGACTGATTTGTAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTACGCTTTCTACATGGTaGTCATCCCTAACAAAGAGT +
Preference number: 3 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVTLSTW*SSLTKS
Trigger: ACTCTTTGTTAGGGATGACAACCATGTAGAAAGCGT...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGAAAACCAAGCATCTTaGTGTAGCCTTGGCAAGTTT +
Preference number: 3 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVENQAS*CSLGKF
Trigger: AAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR GCA 72 bp AGTGATCTTCCCTCTCTGTCTTCAGAGGGACAGAAATaGAATCAAGGAGTTAAATGCAATGATTATCAAGCA +
Preference number: 3 (lower is better)
Translates to: SDLPSLSSEGQK*NQGVKCNDYQA
Trigger: TGCTTGATAATCATTGCATTTAACTCCTTGATTGCATTTCTGTCCCTCTGAAGACAGAGAGGGAAGATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTTCTACAATGTCCTCTaGCCCCATAATCTATATCTC +
Preference number: 3 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNFYNVL*PHNLYL
Trigger: GAGATATAGATTATGGGGCAAGAGGACATTGTAGAA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR-3UTR CAA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTTACTGTTATTGTTGTaGTTGGGGATTTTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNLLLLL*LGILWK
Trigger: CTTCCACAAAATCCCCAACAACAACAATAACAGTAA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGGACTCCAGGCTCTGCTaGCGACCCCTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLDSRLC*RPLSAV
Trigger: CACTGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTC...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTACATTGCCCCTTCCCTaGACAGTCCCCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LISDSVDIWELGAPLCPSTLPLP*TVPRAA
Trigger: CGCTGCCCTGGGGACTGTTCAGGGAAGGGGCAATGT...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTTGGAGGGGCAACTGCTaGGCAGTCAGGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIWRGNC*AVRALV
Trigger: TACCAGGGCCCTGACTGCTCAGCAGTTGCCCCTCCA...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGGTAGACTCCAGGCTCTaGTGCCGACCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLVDSRL*CRPLSA
Trigger: TGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTCTAC...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGGCACCAGGGTGCAGATaGGTTCACTCTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLAPGCR*VHSPPC
Trigger: GCAGGGAGGAGAGTGAACGCATCTGCACCCTGGTGC...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGGCAGCGCAGCTCCCTaGAGTCCTCGCCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKGSAAP*SPRLCR
Trigger: CCTACACAGGCGAGGACTGCAGGGAGCTGCGCTGCC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGCACATATTCCGTCACTaGCATCGGCCCGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLHIFRH*HRPVPF
Trigger: GAATGGGACGGGCCGATGGCAGTGACGGAATATGTG...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTGAGGGTCCAGGAGGGTaGAGAAGTTGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIEGPGG*RSWWQW
Trigger: CCATTGCCACCAACTTCTCCACCCTCCTGGACCCTC...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTATGGGCACCGGAGCTCTaGACAGTCATCTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLWAPEL*TVISAV
Trigger: TACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCA...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGCCCCTCCTGGCAGTaGCCTCGCCCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSPSWQ*PRPLQA
Trigger: TGCCTGCAGTGGGCGAGGTCACTGCCAGGAGGGGCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTAGGAGGCTGTTACCATaGGGTCTCGGGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LISDSVDIWELGAPLCPSRRLLP*GLGDCQ
Trigger: TTGACAGTCCCCGAGACCTCATGGTAACAGCCTCCT...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTGGCTTAGCTCCCCATTaGGGAAGATGGTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIGLAPH*GRWCKR
Trigger: GCGTTTACACCATCTTCCTCAATGGGGAGCTAAGCC...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGCCCCGTACTTCCCGTTaGGGTTGGTCCGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLPRTSR*GWSGGS
Trigger: ACTGCCACCGGACCAACCTCAACGGGAAGTACGGGG...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGAGAGCCCTCGGGAACTaGAGTCTGTTGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: TQGGWMKTKHLCVALASLRALGN*SLLGTG
Trigger: TCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCT...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGCAGCGCAGCTCCCTaGAGTCCTCGCCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGSAAP*SPRLCR
Trigger: CCTACACAGGCGAGGACTGCAGGGAGCTGCGCTGCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTACAGGTCAAGGCTAGTTaGTGTGCGGGAACCCACTCG +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVQVKAS*CAGTHS
Trigger: CGAGTGGGTTCCCGCACAGCAACTAGCCTTGACCTG...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTGTCTGCTGGGGGAGATaGGTCACTCCAGGTGATATT +
Preference number: 4 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIVCWGR*VTPGDI
Trigger: AATATCACCTGGAGTGACCCATCTCCCCCAGCAGAC...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGACATTGCCCCTTCCCTaGACAGTCCCCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVTLPLP*TVPRAA
Trigger: CGCTGCCCTGGGGACTGTTCAGGGAAGGGGCAATGT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGAGGGGCAACTGCTaGGCAGTCAGGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWRGNC*AVRALV
Trigger: TACCAGGGCCCTGACTGCTCAGCAGTTGCCCCTCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTGTGGGCCCGTCAATaGCAGTGGAGACGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVWARQ*QWRRWQ
Trigger: CTGCCAGCGTCTCCACTGTCATTGACGGGCCCACAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCCCGTACTTCCCGTTaGGGTTGGTCCGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPRTSR*GWSGGS
Trigger: ACTGCCACCGGACCAACCTCAACGGGAAGTACGGGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGACTCCAGGCTCTGCTaGCGACCCCTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVDSRLC*RPLSAV
Trigger: CACTGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTACCCATCAAGACAGCGTaGCTCTTGGTGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVPIKTA*LLVASK
Trigger: CTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGG...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTACACTTCACCCATGGGTaGTTTCCACTGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVHFTHG*FPLEQG
Trigger: GCCTTGCTCCAGTGGAAAGCACCCATGGGTGAAGTG...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCACACACACCCCGACTaGAGCAGCCCAGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVHTHPD*SSPVGS
Trigger: ACTGCCCACTGGGCTGCTCCAGTCGGGGTGTGTGTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTTGGGCTGTTATCCTGTaGATGTTGTCTAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIWAVIL*MLSSPS
Trigger: GCTAGGGCTAGACAACATCCACAGGATAACAGCCCA...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGTGGCAGCGCTTTCCTaGCAGCAGTTGGTATTGCAC +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKVAALS*QQLVLH
Trigger: GTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCAC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTAGCCCCTCCTGGCAGTaGCCTCGCCCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVSPSWQ*PRPLQA
Trigger: TGCCTGCAGTGGGCGAGGTCACTGCCAGGAGGGGCT...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTGTGCGCTTTGCCTGGTaGCTTCACTGGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCVRFAW*LHWLSG
Trigger: ACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCAC...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTACCAGTTGATCCCCTaGCTGTGCCTGGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVYQLIP*LCLDSP
Trigger: CGGGGAGTCCAGGCACAGTCAGGGGATCAACTGGTA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGTACCAGTTGATCCCCTaGCTGTGCCTGGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWYQLIP*LCLDSP
Trigger: CGGGGAGTCCAGGCACAGTCAGGGGATCAACTGGTA...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACGGCTCAGCAGTTCCTaGAGTACCTGGGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKRLSSS*STWEEL
Trigger: AAGCTCTTCCCAGGTACTGCAGGAACTGCTGAGCCG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGAGCCCTCGGGAACTaGAGTCTGTTGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRALGN*SLLGTG
Trigger: TCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTAGACTCCAGGCTCTaGTGCCGACCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVDSRL*CRPLSA
Trigger: TGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTCTAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGCACCAGGGTGCAGATaGGTTCACTCTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVAPGCR*VHSPPC
Trigger: GCAGGGAGGAGAGTGAACGCATCTGCACCCTGGTGC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGCTATCCATGGCTGTGTaGACCAGGGTGCAGATGCGT +
Preference number: 4 (lower is better)
Translates to: TQGGWMKTKHLCVALASLLSMAV*TRVQMR
Trigger: ACGCATCTGCACCCTGGTGCACACAGCCATGGATAG...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAGTAGCCCTTGAGGAGTaGAGAGATGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKVALEE*RDEWPP
Trigger: AGGTGGCCACTCATCTCTCCACTCCTCAAGGGCTAC...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGAGGACGTCACATCGCTaGGGAGCTGAGCAATCACCC +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLRTSHR*GAEQSP
Trigger: GGGTGATTGCTCAGCTCCCCAGCGATGTGACGTCCT...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCATGGGGCTATCCATaGCTGTGTGCACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPWGYP*LCAPGC
Trigger: GCACCCTGGTGCACACAGCCATGGATAGCCCCATGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTATACACTTGCAGCTTGTaGCTTAGCTCCCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLYTCSL*LSSPLR
Trigger: CCTCAATGGGGAGCTAAGCCACAAGCTGCAAGTGTA...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCCCCTGACTGTGCCTaGACTCCCCGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSPDCA*TPRTSR
Trigger: ACGGGAAGTACGGGGAGTCCAGGCACAGTCAGGGGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGGCACCGGAGCTCTaGACAGTCATCTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWAPEL*TVISAV
Trigger: TACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGACATCGCTGGGGAGCTaGGCAATCACCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVTSLGS*AITPPS
Trigger: TGAAGGAGGGGTGATTGCTCAGCTCCCCAGCGATGT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAAACAACCTTGTACTCCTaGGCTTCGGCCTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKTTLYS*ASASLL
Trigger: TAACAGCGAGGCCGAAGCTCAGGAGTACAAGGTTGT...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTATCCCTGGGCACAGTaGCTTCGGAGGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVYPWAQ*LRRRSQ
Trigger: CTGGGATCTCCTCCGAAGTCACTGTGCCCAGGGATA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTGGCTGTAGTTCAGAATaGGTCTGTCTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGGCSSE*VCLLGE
Trigger: CTCCCCCAGCAGACAGACTCATTCTGAACTACAGCC...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAATGGTGCCACTCATaGGAGGCCCACTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQWCHS*EAHWWH
Trigger: ATGCCACCAGTGGGCCTCTCATGAGTGGCACCATTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTGCGCTTTGCCTGGTaGCTTCACTGGCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVRFAW*LHWLSG
Trigger: ACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTAGCTCTGAGCAGTTCTTaGCAAACCAGCCTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVALSSS*QTSLHC
Trigger: GCAATGAAGGCTGGTTTGGCAAGAACTGCTCAGAGC...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGTGACCTCGCCCACTaGAGGCATTCAGACACCGTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSDLAH*RHSDTV
Trigger: GACGGTGTCTGAATGCCTGCAGTGGGCGAGGTCACT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGCTTAAGGGAGGCTaGAGCCGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWLKGG*SRKVVF
Trigger: GAAGACGACCTTCCGGCTGCAGCCTCCCTTAAGCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGGTCAAGGCTAGTTaGTGTGCGGGAACCCACTCG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQVKAS*CAGTHS
Trigger: CGAGTGGGTTCCCGCACAGCAACTAGCCTTGACCTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGGACGTCACATCGCTaGGGAGCTGAGCAATCACCC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRTSHR*GAEQSP
Trigger: GGGTGATTGCTCAGCTCCCCAGCGATGTGACGTCCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGCTTGCACGGAGTACTaGCTTAAGGGAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVACTEY*LKGGCS
Trigger: GCTGCAGCCTCCCTTAAGCCAGTACTCCGTGCAAGC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGGCTTGCACGGAGTACTaGCTTAAGGGAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWACTEY*LKGGCS
Trigger: GCTGCAGCCTCCCTTAAGCCAGTACTCCGTGCAAGC...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGCGTGCCTCTTGGTaGCATCCAAGAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQRASW*HPRGPP
Trigger: TGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTGGAGGGTGGAGAAGTTaGTGGCAATGGTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGGGWRS*WQWCHS
Trigger: TGAGTGGCACCATTGCCACCAACTTCTCCACCCTCC...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGAGGGTCCAGGAGGGTaGAGAAGTTGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVEGPGG*RSWWQW
Trigger: CCATTGCCACCAACTTCTCCACCCTCCTGGACCCTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTTTTCAATCGCAGCTCTaGGCGGCTGCCAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGFQSQL*AAARRS
Trigger: TGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAA...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTATGCGGCTTCCATCGGTaGACTTGTATGTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLCGFHR*TCMSRH
Trigger: ATGTCTTGACATACAAGTCCACCGATGGAAGCCGCA...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGGACACTCAGAAGGCTTaGGCATGGATCCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLDTQKA*AWIPTG
Trigger: TCCTGTTGGGATCCATGCTCAAGCCTTCTGAGTGTC...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTGGCAGCGCTTTCCTaGCAGCAGTTGGTATTGCAC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVAALS*QQLVLH
Trigger: GTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAATGGACCTGTCGCTaGTACCAGCCACTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQWTCR*YQPLAS
Trigger: ACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCAATGGACCTGTCGCTaGTACCAGCCACTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWQWTCR*YQPLAS
Trigger: ACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGGAGGCTGTTACCATaGGGTCTCGGGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRRLLP*GLGDCQ
Trigger: TTGACAGTCCCCGAGACCTCATGGTAACAGCCTCCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGCTGTAGTTCAGAATaGGTCTGTCTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGCSSE*VCLLGE
Trigger: CTCCCCCAGCAGACAGACTCATTCTGAACTACAGCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCGGCTCAGCAGTTCCTaGAGTACCTGGGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRLSSS*STWEEL
Trigger: AAGCTCTTCCCAGGTACTGCAGGAACTGCTGAGCCG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTGACAGCAGTTGGTATTaGACTGGTCTCGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCDSSWY*TGLAAR
Trigger: CCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTC...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGTTGCCATGGCCGCTaGAGTGAGGGACATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSCHGR*SEGHSP
Trigger: TGGACTATGTCCCTCACTGCAGCGGCCATGGCAACT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGAGCCTTCATTGCAGATaGAGCCACAGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLSLHCR*SHRTRS
Trigger: GCTTCGAGTCCTGTGGCTGCATCTGCAATGAAGGCT...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCACATATTCCGTCACTaGCATCGGCCCGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVHIFRH*HRPVPF
Trigger: GAATGGGACGGGCCGATGGCAGTGACGGAATATGTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCCATCAAGACAGCGTaGCTCTTGGTGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPIKTA*LLVASK
Trigger: CTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTATCCATGGCTGTGTaGACCAGGGTGCAGATGCGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLSMAV*TRVQMR
Trigger: ACGCATCTGCACCCTGGTGCACACAGCCATGGATAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCACTTCACCCATGGGTaGTTTCCACTGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVHFTHG*FPLEQG
Trigger: GCCTTGCTCCAGTGGAAAGCACCCATGGGTGAAGTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTAGGTCTCTCCAGCAATTaGAAAGTGTGTGAGGACGAT +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVGLSSN*KVCEDD
Trigger: ATCGTCCTCACACACTTTGCAATTGCTGGAGAGACC...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTGAGATCAGTGCGCTTTaGCTGGTGACTTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGEISAL*LVTSLA
Trigger: AGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTC...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAATCTTGTACAGGCTTCTaGTGTCCTCCACAGCGAACT +
Preference number: 4 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKSCTGF*CPPQRT
Trigger: AGTTCGCTGTGGAGGACAGCAGAAGCCTGTACAAGA...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGCAGTTGGTATTGCACTaGTCTCGCAGCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLQLVLH*SRSKDT
Trigger: GGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTG...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTCACACACACCCCGACTaGAGCAGCCCAGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVHTHPD*SSPVGS
Trigger: ACTGCCCACTGGGCTGCTCCAGTCGGGGTGTGTGTG...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTAGCCCTTGAGGAGTaGAGAGATGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVALEE*RDEWPP
Trigger: AGGTGGCCACTCATCTCTCCACTCCTCAAGGGCTAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTAATGAGTCTGTCTGCTaGGGGAGATGGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGNESVC*GRWVTP
Trigger: TGGAGTGACCCATCTCCCCCAGCAGACAGACTCATT...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTCCCCGTCAACCAGGATaGTCTCTCCAGCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCPRQPG*SLQQLQ
Trigger: TTGCAATTGCTGGAGAGACCATCCTGGTTGACGGGG...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGAGGGTGGAGAAGTTaGTGGCAATGGTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGGWRS*WQWCHS
Trigger: TGAGTGGCACCATTGCCACCAACTTCTCCACCCTCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTTTCAATCGCAGCTCTaGGCGGCTGCCAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVFQSQL*AAARRS
Trigger: TGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
3UTR CAA 72 bp ATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTaGGTTAGATGGTGGCTGTTTCTATTTCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: ISPGGLLLVAQS*VRWWLFLFQDA
Trigger: GGCATCTTGAAATAGAAACAGCCACCATCTAACCAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp TCTTTGAGCTACAGCGCCATGAAAGGATGGGGCAAGTaGGCTCTCCCTCTTCAATCCTCTATAGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLSYSAMKGWGK*ALPLQSSIAFC
Trigger: ACAAAAGGCTATAGAGGATTGAAGAGGGAGAGCCAACTTGCCCCATCCTTTCATGGCGCTGTAGCTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGACACTCAGAAGGCTTaGGCATGGATCCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVDTQKA*AWIPTG
Trigger: TCCTGTTGGGATCCATGCTCAAGCCTTCTGAGTGTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGACAACCTTGTACTCCTaGGCTTCGGCCTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVTTLYS*ASASLL
Trigger: TAACAGCGAGGCCGAAGCTCAGGAGTACAAGGTTGT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGCTTAGCTCCCCATTaGGGAAGATGGTGTAAACGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGLAPH*GRWCKR
Trigger: GCGTTTACACCATCTTCCTCAATGGGGAGCTAAGCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGACAGCAGTTGGTATTaGACTGGTCTCGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVDSSWY*TGLAAR
Trigger: CCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGCCTTCATTGCAGATaGAGCCACAGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSLHCR*SHRTRS
Trigger: GCTTCGAGTCCTGTGGCTGCATCTGCAATGAAGGCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGAATGAGTCTGTCTaGTGGGGGAGATGGGTCACT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQNESV*WGRWVT
Trigger: AGTGACCCATCTCCCCCAGCAGACAGACTCATTCTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGAGATCAGTGCGCTTTaGCTGGTGACTTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVEISAL*LVTSLA
Trigger: AGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGTTGGTATTGCACTaGTCTCGCAGCAAGGACACC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQLVLH*SRSKDT
Trigger: GGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: TQGGWMKTKHLCVALASLFPDSS*YCTGLA
Trigger: TGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAA...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTTGTAGGTGAGACCTaGCTCCAGCTCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVVGET*LQLHDG
Trigger: ACCATCATGGAGCTGGAGCCAGGTCTCACCTACAAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGGGTTTCAGTCCTGTCTaGTTAAAGGACGTCACATCG +
Preference number: 4 (lower is better)
Translates to: TQGGWMKTKHLCVALASLGFSPV*LKDVTS
Trigger: CGATGTGACGTCCTTTAACCAGACAGGACTGAAACC...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTTTCTGTAGTGATCAATaGGACCACTGGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGFCSDQ*DHWPWS
Trigger: GGACCAAGGCCAGTGGTCCCATTGATCACTACAGAA...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTCTGCTGGGGGAGATaGGTCACTCCAGGTGATATT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVCWGR*VTPGDI
Trigger: AATATCACCTGGAGTGACCCATCTCCCCCAGCAGAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAATGAGTCTGTCTGCTaGGGGAGATGGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVNESVC*GRWVTP
Trigger: TGGAGTGACCCATCTCCCCCAGCAGACAGACTCATT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGGAGGTTACCGTCCCATaGACAGCTACAAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLEVTVP*TATRFT
Trigger: AGTGAACCTTGTAGCTGTCCATGGGACGGTAACCTC...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGCCATGGGGCTATCCATaGCTGTGTGCACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGPWGYP*LCAPGC
Trigger: GCACCCTGGTGCACACAGCCATGGATAGCCCCATGG...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCCCGTCAACCAGGATaGTCTCTCCAGCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPRQPG*SLQQLQ
Trigger: TTGCAATTGCTGGAGAGACCATCCTGGTTGACGGGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGTCTCTGTCCTCAGTaGAGAAAGGACGTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVCLCPQ*RKDVPG
Trigger: ACCAGGGACGTCCTTTCTCCACTGAGGACAGAGACA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGTGTCTCTGTCCTCAGTaGAGAAAGGACGTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWCLCPQ*RKDVPG
Trigger: ACCAGGGACGTCCTTTCTCCACTGAGGACAGAGACA...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTCCCCTGACTGTGCCTaGACTCCCCGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNSPDCA*TPRTSR
Trigger: ACGGGAAGTACGGGGAGTCCAGGCACAGTCAGGGGA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCCACAGTTTGTCTCTaGGCCCTTTCTGTAGTCACC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSTVCL*ALSVVT
Trigger: GGTGACTACAGAAAGGGCTCAGAGACAAACTGTGGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTCTGGCTTTCATGGTCTaGGGTTTGGCCTATGTATTC +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGLAFMV*GLAYVF
Trigger: GAATACATAGGCCAAACCTCAGACCATGAAAGCCAG...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTACATCGCTGGGGAGCTaGGCAATCACCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVTSLGS*AITPPS
Trigger: TGAAGGAGGGGTGATTGCTCAGCTCCCCAGCGATGT...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGAGATAGAGGTCTCTaGGGAGGCTGTTACCATGAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRDRGL*GGCYHE
Trigger: CTCATGGTAACAGCCTCCTCAGAGACCTCTATCTCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTGGAGGAGGTCACATaGGAAAAGTGCAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLEEVT*EKCKWE
Trigger: CTCCCATTTGCACTTTTCTCATGTGACCTCCTCCAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCTGGAGGAGGTCACATaGGAAAAGTGCAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWLEEVT*EKCKWE
Trigger: CTCCCATTTGCACTTTTCTCATGTGACCTCCTCCAG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTCAATGGTGCCACTCATaGGAGGCCCACTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVQWCHS*EAHWWH
Trigger: ATGCCACCAGTGGGCCTCTCATGAGTGGCACCATTG...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTACATGGCACAGTTGGTaGCTGCAACATCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGTWHSW*LQHHCL
Trigger: GAGACAATGATGTTGCAGTCACCAACTGTGCCATGT...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGCTCTGAGCAGTTCTTaGCAAACCAGCCTTCATTGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVALSSS*QTSLHC
Trigger: GCAATGAAGGCTGGTTTGGCAAGAACTGCTCAGAGC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGTGGCTTAAGGGAGGCTaGAGCCGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGWLKGG*SRKVVF
Trigger: GAAGACGACCTTCCGGCTGCAGCCTCCCTTAAGCCA...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCTTGTACAGGCTTCTaGTGTCCTCCACAGCGAACT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSCTGF*CPPQRT
Trigger: AGTTCGCTGTGGAGGACAGCAGAAGCCTGTACAAGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGAAGTATTGTAGCTaGAAGCCCCTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWKYCS*KPLLPP
Trigger: AGGAGGAAGGAGGGGCTTCCAGCTACAATACTTCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GGCAAGGTTCAGACAGCTTTGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGTTCATGGTCTGAGGTTTaGCCTATGTATTCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GKVQTALVTGVLNNGWVGSWSEV*PMYSAR
Trigger: TCTGGCCGAATACATAGGCCAAACCTCAGACCATGA...ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTTGGGTGAAGGTAACCTaGCTTTCATGGTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCWVKVT*LSWSEV
Trigger: AACCTCAGACCATGAAAGCCAGGTTACCTTCACCCA...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp ATGTCCTGTCATGTTCCTTCAGGGAACTCTGGGATCTGGGAGGTGGTCGTGTTATCCTTCATTGTTCTTTaGAATGAAGCTGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: MSCHVPSGNSGIWEVVVLSFIVL*NEADLP
Trigger: TGGGAGATCAGCTTCATTCCAAAGAACAATGAAGGA...TAACACGACCACCTCCCAGATCCCAGAGTTCCCTGAAGGAACATGACAGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAACTTTGGCTCGAGGTaGGGTCCATTCCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVNFGSR*GPFHKS
Trigger: GCTTTTGTGGAATGGACCCCACCTCGAGCCAAAGTT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGAACTTTGGCTCGAGGTaGGGTCCATTCCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWNFGSR*GPFHKS
Trigger: GCTTTTGTGGAATGGACCCCACCTCGAGCCAAAGTT...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCCATACTCTGTGCCTaGAACCAGATCTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSILCA*NQICEG
Trigger: ACCCTCACAGATCTGGTTCCAGGCACAGAGTATGGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTTCTGTAGTGATCAATaGGACCACTGGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVFCSDQ*DHWPWS
Trigger: GGACCAAGGCCAGTGGTCCCATTGATCACTACAGAA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACCAGCGTGCCTCTTGGTaGCATCCAAGAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNQRASW*HPRGPP
Trigger: TGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTG...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGAGGTTACCGTCCCATaGACAGCTACAAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVEVTVP*TATRFT
Trigger: AGTGAACCTTGTAGCTGTCCATGGGACGGTAACCTC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTACACTTGCAGCTTGTaGCTTAGCTCCCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVYTCSL*LSSPLR
Trigger: CCTCAATGGGGAGCTAAGCCACAAGCTGCAAGTGTA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGGCTGTTATCCTGTaGATGTTGTCTAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWAVIL*MLSSPS
Trigger: GCTAGGGCTAGACAACATCCACAGGATAACAGCCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
3UTR CAA 72 bp AGCTATTGCATGACCCAGGGCAAGGTTCAGACAGCTTaGGTAACTGGAGTTCTAAACAATGGTTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SYCMTQGKVQTA*VTGVLNNGWVG
Trigger: ACCAACCCAACCATTGTTTAGAACTCCAGTTACCAAAGCTGTCTGAACCTTGCCCTGGGTCATGCAATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp CCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGNFYRLEGTWG*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTGGCTTTCATGGTCTaGGGTTTGGCCTATGTATTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLAFMV*GLAYVF
Trigger: GAATACATAGGCCAAACCTCAGACCATGAAAGCCAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGTGCCCCGTACACTGTTaGGGCTTATTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLCPVHC*GLFHIQ
Trigger: CTGAATATGAAATAAGCCTCAACAGTGTACGGGGCA...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGACATGGCACAGTTGGTaGCTGCAACATCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVTWHSW*LQHHCL
Trigger: GAGACAATGATGTTGCAGTCACCAACTGTGCCATGT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGTCTCTCCAGCAATTaGAAAGTGTGTGAGGACGAT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGLSSN*KVCEDD
Trigger: ATCGTCCTCACACACTTTGCAATTGCTGGAGAGACC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCATGGTCTGAGGTTTaGCCTATGTATTCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSWSEV*PMYSAR
Trigger: TCTGGCCGAATACATAGGCCAAACCTCAGACCATGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTAACCTGGCTTTCATaGTCTGAGGTTTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVTWLS*SEVWPM
Trigger: CATAGGCCAAACCTCAGACCATGAAAGCCAGGTTAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGGGTGAAGGTAACCTaGCTTTCATGGTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVWVKVT*LSWSEV
Trigger: AACCTCAGACCATGAAAGCCAGGTTACCTTCACCCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVFPDSS*YCTGLA
Trigger: TGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGTTTCAGTCCTGTCTaGTTAAAGGACGTCACATCG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGFSPV*LKDVTS
Trigger: CGATGTGACGTCCTTTAACCAGACAGGACTGAAACC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTAGGAGATCCCAGAAGATaGGGTAAAAGTAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVGDPRR*GKSNSV
Trigger: TACAGAATTACTTTTACCCCATCTTCTGGGATCTCC...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGCGGCTTCCATCGGTaGACTTGTATGTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVCGFHR*TCMSRH
Trigger: ATGTCTTGACATACAAGTCCACCGATGGAAGCCGCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
3UTR CAA 72 bp CTGATGATGTCTTTAATGTGGCCACTCACGTGGCTTTaGTGTTTCCACTGTGGGGCCTCTAAGGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LMMSLMWPLTWL*CFHCGASKVCF
Trigger: AAAACAAACCTTAGAGGCCCCACAGTGGAAACACAAAAGCCACGTGAGTGGCCACATTAAAGACATCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp AATAAGTGTCTGAGGTGTTCCAGAGGAGTTACCATTTaGAGGGGGACCTCAATTCACTCTTGGGAAGACCTA +
Preference number: 4 (lower is better)
Translates to: NKCLRCSRGVTI*RGTSIHSWEDL
Trigger: TAGGTCTTCCCAAGAGTGAATTGAGGTCCCCCTCAAAATGGTAACTCCTCTGGAACACCTCAGACACTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTGCCCCGTACACTGTTaGGGCTTATTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVCPVHC*GLFHIQ
Trigger: CTGAATATGAAATAAGCCTCAACAGTGTACGGGGCA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGATTCACTGTCACAAATaGACTGGCCATCGACACACA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVIHCHK*TGHRHT
Trigger: TGTGTGTCGATGGCCAGTGCATTTGTGACAGTGAAT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTTCACCAGCTAAGGTaGTGTACACAACCTTGTACT +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVHQLR*CTQPCT
Trigger: AGTACAAGGTTGTGTACAGCACCTTAGCTGGTGAAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGCAGAATGAGTCTGTCTaGTGGGGGAGATGGGTCACT +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGQNESV*WGRWVT
Trigger: AGTGACCCATCTCCCCCAGCAGACAGACTCATTCTG...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGTCAGTTTGTCCATTTTaGCGCCTCTGGAATACAATC +
Preference number: 4 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLSVCPF*RLWNTI
Trigger: GATTGTATTCCAGAGGCGGCAAAATGGACAAACTGA...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACGTTGTAGGTGAGACCTaGCTCCAGCTCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNVVGET*LQLHDG
Trigger: ACCATCATGGAGCTGGAGCCAGGTCTCACCTACAAC...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TTTGGGCACCTGGAAATTTCTATAGGCTTGAGGGTACTTGGGGTTTGTGTGTGTTTTCTACAAAGGGGATaGAGAATTCATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FGHLEISIGLRVLGVCVCFLQRG*RIHGLS
Trigger: GGAAAGGCCATGAATTCTCCATCCCCTTTGTAGAAA...ACACACACAAACCCCAAGTACCCTCAAGCCTATAGAAATTTCCAGGTGCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp TCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATaGTTGTTGTTGGGGATTTTGTGGAAGTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: SMAVSGDWLLLL*LLLGILWKCTF
Trigger: GAAGGTACACTTCCACAAAATCCCCAACAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGAGAGATAGAGGTCTCTaGGGAGGCTGTTACCATGAG +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGRDRGL*GGCYHE
Trigger: CTCATGGTAACAGCCTCCTCAGAGACCTCTATCTCT...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCAGTTTGTCCATTTTaGCGCCTCTGGAATACAATC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSVCPF*RLWNTI
Trigger: GATTGTATTCCAGAGGCGGCAAAATGGACAAACTGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTTGGAAGTATTGTAGCTaGAAGCCCCTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVWKYCS*KPLLPP
Trigger: AGGAGGAAGGAGGGGCTTCCAGCTACAATACTTCCA...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGATCTCTGTTGTAAATTaGGTGCTTGAGGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVISVVN*VLEASL
Trigger: GAGTGAAGCCTCAAGCACCCAATTTACAACAGAGAT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTCCATACTCTGTGCCTaGAACCAGATCTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNSILCA*NQICEG
Trigger: ACCCTCACAGATCTGGTTCCAGGCACAGAGTATGGA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTTTCTACAAAGGGGATaGAGAATTCATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVFLQRG*RIHGLS
Trigger: GGAAAGGCCATGAATTCTCCATCCCCTTTGTAGAAA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
3UTR CAA 72 bp TCTGGGCTATTTCTTACTATTTCTGACAGTAATAGTTaGGGGCTGAGGGTTTCTCTGCAGCATAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: SGLFLTISDSNS*GLRVSLQHSMR
Trigger: TCTCATGCTATGCTGCAGAGAAACCCTCAGCCCCAAACTATTACTGTCAGAAATAGTAAGAAATAGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp TTGGCTCTCCCTCTTCAATCCTCTATAGCCTTTTGTTaGATTTCATCAGAGTGTGCACCACCTGATGAGAAT +
Preference number: 4 (lower is better)
Translates to: LALPLQSSIAFC*ISSECAPPDEN
Trigger: ATTCTCATCAGGTGGTGCACACTCTGATGAAATCAAACAAAAGGCTATAGAGGATTGAAGAGGGAGAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCAGGTTTACACCAATaGGCATGTTCTTCAAGACTA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSGLHQ*ACSSRL
Trigger: TAGTCTTGAAGAACATGCTCATTGGTGTAAACCTGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCCTTCATTGTTCTTTaGAATGAAGCTGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSFIVL*NEADLP
Trigger: TGGGAGATCAGCTTCATTCCAAAGAACAATGAAGGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGAGATCCCAGAAGATaGGGTAAAAGTAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGDPRR*GKSNSV
Trigger: TACAGAATTACTTTTACCCCATCTTCTGGGATCTCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGATTCACTGTCACAAATaGACTGGCCATCGACACACA +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGIHCHK*TGHRHT
Trigger: TGTGTGTCGATGGCCAGTGCATTTGTGACAGTGAAT...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR GCA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGTTCACCAGCTAAGGTaGTGTACACAACCTTGTACT +
Preference number: 4 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVVHQLR*CTQPCT
Trigger: AGTACAAGGTTGTGTACAGCACCTTAGCTGGTGAAC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CCA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGATCTCTGTTGTAAATTaGGTGCTTGAGGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGISVVN*VLEASL
Trigger: GAGTGAAGCCTCAAGCACCCAATTTACAACAGAGAT...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp CTTCCTGAGTACAATGTACCTACATCTCAACGAATCTaGTACTTTCTCTTCAGAGGCCATGGTAGTAACTTA +
Preference number: 4 (lower is better)
Translates to: LPEYNVPTSQRI*YFLFRGHGSNL
Trigger: TAAGTTACTACCATGGCCTCTGAAGAGAAAGTACAAGATTCGTTGAGATGTAGGTACATTGTACTCAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR TCA 90 bp TGTAGTTGTTTGAACACACTCATAACTCTTCCTTTGCAAACTCTAGGGTCAAACTCAGGTTTACACCAATaGGCATGTTCTTCAAGACTA +
Preference number: 4 (lower is better)
Translates to: CSCLNTLITLPLQTLGSNSGLHQ*ACSSRL
Trigger: TAGTCTTGAAGAACATGCTCATTGGTGTAAACCTGA...GTTTGACCCTAGAGTTTGCAAAGGAAGAGTTATGAGTGTGTTCAAACAACTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp AAGTTAATAGAGGAGATCTTAGGAGCCAGGACCTTGTaGAATGGATATCCTGCAATAAATAGTCTTAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLIEEILGARTL*NGYPAINSLKL
Trigger: CAGCTTAAGACTATTTATTGCAGGATATCCATTCAACAAGGTCCTGGCTCCTAAGATCTCCTCTATTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp CTTTCCTTTAATTGCGATGACTCACCAAGACCAACTTaGATTCTGCTTTTCTATTACAGATGGTTAAACCTA +
Preference number: 4 (lower is better)
Translates to: LSFNCDDSPRPT*ILLFYYRWLNL
Trigger: TAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGGTGAGTCATCGCAATTAAAGGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
3UTR CAA 72 bp ATTAAGTTAATAGAGGAGATCTTAGGAGCCAGGACCTaGTTGAATGGATATCCTGCAATAAATAGTCTTAAG +
Preference number: 4 (lower is better)
Translates to: IKLIEEILGART*LNGYPAINSLK
Trigger: CTTAAGACTATTTATTGCAGGATATCCATTCAACAAGGTCCTGGCTCCTAAGATCTCCTCTATTAACTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS GCA 90 bp GGGCAACTGCTGAGCAGTCAGGGCCCTGGTAGCCTTCCTCACAGATaGAGAGCCCCTCCTGGCAGTGACCTCGCCCACTGCAGGCATTCA +
Preference number: 5 (lower is better)
Translates to: GQLLSSQGPGSLPHR*RAPPGSDLAHCRHS
Trigger: TGAATGCCTGCAGTGGGCGAGGTCACTGCCAGGAGGGGCTCTGCATCTGTGAGGAAGGCTACCAGGGCCCTGACTGCTCAGCAGTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp GAGCCAGGTCTAAGGGCTTGCACGGAGTACTGGCTTAAGGGAGGCTaGAGCCGGAAGGTCGTCTTCCCGCCTTCGCCACCCACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: EPGLRACTEYWLKGG*SRKVVFPPSPPTKP
Trigger: TGGCTTGGTGGGTGGCGAAGGCGGGAAGACGACCTTCCGGCTGCAGCCTCCCTTAAGCCAGTACTCCGTGCAAGCCCTTAGACCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 90 bp TCACTGCCATCGGCCCGTCCCATTCCAGCTCAATGGACCTGTCGCTaGTACCAGCCACTCGCAAGTCCTCTGGAGGGGCAACTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLPSARPIPAQWTCR*YQPLASPLEGQLLS
Trigger: GCTCAGCAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTGAGCTGGAATGGGACGGGCCGATGGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 90 bp TCACTGCCATCGGCCCGTCCCATTCCAGCTCAATGGACCTGTCGCTaGTACCAGCCACTCGCAAGTCCTCTGGAGGGGCAACTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLPSARPIPAQWTCR*YQPLASPLEGQLWQ
Trigger: CTGCCACAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTGAGCTGGAATGGGACGGGCCGATGGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS GCA 90 bp CCCGACTGGAGCAGCCCAGTGGGCAGTAGGGCTCTGAGCAGTTCTTaGCAAACCAGCCTTCATTGCAGATGCAGCCACAGGACTCGAAGC +
Preference number: 5 (lower is better)
Translates to: PDWSSPVGSRALSSS*QTSLHCRCSHRTRS
Trigger: GCTTCGAGTCCTGTGGCTGCATCTGCAATGAAGGCTGGTTTGGCAAGAACTGCTCAGAGCCCTACTGCCCACTGGGCTGCTCCAGTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp TTTTCAATCGCAGCTCTGGGCGGCTGCCAGGAGATCAGTGCGCTTTaGCTGGTGACTTCACTGGCTGTCAGGTTGTCAGGAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FSIAALGGCQEISAL*LVTSLAVRLSGGSR
Trigger: CCTGGACCCTCCTGACAACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp AGTCCTCTGGAGGGGCAACTGTGGCAGCGCTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCAGCAAGGACACCTCCCTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SPLEGQLWQRFPDSS*YCTGLAARTPPSPA
Trigger: TGCTGGAGAGGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGTTGCCCCTCCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS-3UTR CAA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTTCCCCGTACTTCCCGTaGAGGTTGGTCCGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFISPYFP*RLVRWQ
Trigger: CTGCCACCGGACCAACCTCAACGGGAAGTACGGGGA...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS TCA 90 bp GTATTCGGCCAGAGTATCATCTTCAGCACTCATGTCCTGCTCAGCTaGGGCCTCCAGCCCCGAGGAGCAGAGGCTTTCAAGTGGCACGTT +
Preference number: 5 (lower is better)
Translates to: VFGQSIIFSTHVLLS*GLQPRGAEAFKWHV
Trigger: AACGTGCCACTTGAAAGCCTCTGCTCCTCGGGGCTGGAGGCCTCAGCTGAGCAGGACATGAGTGCTGAAGATGATACTCTGGCCGAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 90 bp CACACAGAGCCCTCGGGAACTGCAGTCTGTTGGGCACCGGAGCTCTaGACAGTCATCTCCGCTGTATTCACTGTCACAAATGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: HTEPSGTAVCWAPEL*TVISAVFTVTNALA
Trigger: GGCCAGTGCATTTGTGACAGTGAATACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp ACCGGAGCTCTGAACAGTCATCTCCGCTGTATTCACTGTCACAAATaGACTGGCCATCGACACACACACCCCGACTGGAGCAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: TGALNSHLRCIHCHK*TGHRHTHPDWSSPV
Trigger: CACTGGGCTGCTCCAGTCGGGGTGTGTGTGTCGATGGCCAGTGCATTTGTGACAGTGAATACAGCGGAGATGACTGTTCAGAGCTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp AAGCTGATCTCCCACCCGTCGAAGGAGAAAGAGAAGGGCTCCCACTaGACCTCCACGGTGGTCTCTGTGATCGTCTTGAACTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: KLISHPSKEKEKGSH*TSTVVSVIVLNCSP
Trigger: AGGGCTACAGTTCAAGACGATCACAGAGACCACCGTGGAGGTGCAGTGGGAGCCCTTCTCTTTCTCCTTCGACGGGTGGGAGATCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000192457.2
CDS GCA 90 bp GACATAGTTTTCAATCGCAGCTCTGGGCGGCTGCCAGGAGATCAGTaGGCTTTGCCTGGTGACTTCACTGGCTGTCAGGTTGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DIVFNRSSGRLPGDQ*ALPGDFTGCQVVRR
Trigger: CCTCCTGACAACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAAACTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp GGACATAGTCCAGTTGTCCTGTGGCAGCGCTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCAGCAAGGACACCTCCCTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: GHSPVVLWQRFPDSS*YCTGLAARTPPSPA
Trigger: TGCTGGAGAGGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGGACAACTGGACTATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp ATTCACTGTCACAAATGCACTGGCCATCGACACACACACCCCGACTaGAGCAGCCCAGTGGGCAGTAGGGCTCTGAGCAGTTCTTGCCAA +
Preference number: 5 (lower is better)
Translates to: IHCHKCTGHRHTHPD*SSPVGSRALSSSCQ
Trigger: TTGGCAAGAACTGCTCAGAGCCCTACTGCCCACTGGGCTGCTCCAGTCGGGGTGTGTGTGTCGATGGCCAGTGCATTTGTGACAGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGAAGACAGCGTGCCTCTaGGTGGCATCCAAGAGGACC +
Preference number: 5 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLKTACL*VASKRT
Trigger: GGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTT...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS GCA 90 bp GCTTCTGCTGTCCTCCACAGCGAACTTGTCATAGTAGGCAAAGACTaGTTCCTGTCCATCCCGCATATCCACACGCAGCTCATAGCGGCC +
Preference number: 5 (lower is better)
Translates to: ASAVLHSELVIVGKD*FLSIPHIHTQLIAA
Trigger: GGCCGCTATGAGCTGCGTGTGGATATGCGGGATGGACAGGAAGCAGTCTTTGCCTACTATGACAAGTTCGCTGTGGAGGACAGCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTAGGAGGGTGGAGAAGTaGGTGGCAATGGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIRRVEK*VAMVPL
Trigger: GAGTGGCACCATTGCCACCAACTTCTCCACCCTCCT...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS GCA 90 bp CTGAGCTTCGGCCTCGCTGTTATCCCATTCCAGGTCAAGGCTAGTTaGTGTGCGGGAACCCACTCGCAAATTCTTGGGAGCATCAATCTC +
Preference number: 5 (lower is better)
Translates to: LSFGLAVIPFQVKAS*CAGTHSQILGSINL
Trigger: GAGATTGATGCTCCCAAGAATTTGCGAGTGGGTTCCCGCACAGCAACTAGCCTTGACCTGGAATGGGATAACAGCGAGGCCGAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp ATAGGGCGGAAGCCTGTGAAGGCATCCACAGTAGACTCCAGGCTCTaGTGCCGACCCCTCTCAGCAGTGATGGAGATAATGTATTCTGCT +
Preference number: 5 (lower is better)
Translates to: IGRKPVKASTVDSRL*CRPLSAVMEIMYSA
Trigger: AGCAGAATACATTATCTCCATCACTGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTCTACTGTGGATGCCTTCACAGGCTTCCGCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp GTCCCTGGGGCTGTAGTTCAGAATGAGTCTGTCTGCTGGGGGAGATaGGTCACTCCAGGTGATATTGACACTGGAGGAGGTCACATGAGA +
Preference number: 5 (lower is better)
Translates to: VPGAVVQNESVCWGR*VTPGDIDTGGGHMR
Trigger: TCTCATGTGACCTCCTCCAGTGTCAATATCACCTGGAGTGACCCATCTCCCCCAGCAGACAGACTCATTCTGAACTACAGCCCCAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp ATTCAGTGGCTGGCTGTAGACCCATCAAGACAGCGTGCCTCTTGGTaGCATCCAAGAGGACCTCCAACATGTCTTCCTCTTTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: IQWLAVDPSRQRASW*HPRGPPTCLPLCPW
Trigger: CCAGGGACAAAGAGGAAGACATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 90 bp AATGGGACCACTGGCCTTGGTCCAGATGAGAGAGATAGAGGTCTCTaGGGAGGCTGTTACCATGAGGTCTCGGGGACTGTCAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: NGTTGLGPDERDRGL*GGCYHEVSGTVKFS
Trigger: ACTGAACTTGACAGTCCCCGAGACCTCATGGTAACAGCCTCCTCAGAGACCTCTATCTCTCTCATCTGGACCAAGGCCAGTGGTCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp TGCCCTTGGGTACCAGCACTTCGTGGTACTGTTCACCAGCTAAGGTaGTGTACACAACCTTGTACTCCTGAGCTTCGGCCTCGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: CPWVPALRGTVHQLR*CTQPCTPELRPRCY
Trigger: ATAACAGCGAGGCCGAAGCTCAGGAGTACAAGGTTGTGTACAGCACCTTAGCTGGTGAACAGTACCACGAAGTGCTGGTACCCAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp GTCTTCCTCTTTGTCCCTGGGGCTGTAGTTCAGAATGAGTCTGTCTaGTGGGGGAGATGGGTCACTCCAGGTGATATTGACACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VFLFVPGAVVQNESV*WGRWVTPGDIDTGG
Trigger: TCCTCCAGTGTCAATATCACCTGGAGTGACCCATCTCCCCCAGCAGACAGACTCATTCTGAACTACAGCCCCAGGGACAAAGAGGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp GATGTTGCTAATGACAGCGTAGACGCTGATGTTGTAGGTGAGACCTaGCTCCAGCTCCATGATGGTGACACCACTCCAATCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: DVANDSVDADVVGET*LQLHDGDTTPISRH
Trigger: GTGCCTGGAGATTGGAGTGGTGTCACCATCATGGAGCTGGAGCCAGGTCTCACCTACAACATCAGCGTCTACGCTGTCATTAGCAACATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000192457.2
CDS CCA 90 bp TTCCTCTTTGTCCCTGGGGCTGTAGTTCAGAATGAGTCTGTCTGCTaGGGGAGATGGGTCACTCCAGGTGATATTGACACTGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLFVPGAVVQNESVC*GRWVTPGDIDTGGG
Trigger: ACCTCCTCCAGTGTCAATATCACCTGGAGTGACCCATCTCCCCCAGCAGACAGACTCATTCTGAACTACAGCCCCAGGGACAAAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp CTCCCTGCCCCGTACACTGTTGAGGCTTATTTCATATTCAGTAGCTaGATACAGCCTGGTGATGGCGAACTCTGTCACGGTGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LPAPYTVEAYFIFSS*IQPGDGELCHGVGH
Trigger: GTGCCCAACACCGTGACAGAGTTCGCCATCACCAGGCTGTATCCAGCTACTGAATATGAAATAAGCCTCAACAGTGTACGGGGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTCATGGGCAGGCTTTTTaGGGGAGGTTGATCTTGTGG +
Preference number: 5 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIHGQAF*GRLILW
Trigger: CCACAAGATCAACCTCCCCAAAAAAGCCTGCCCATG...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GCTCAGCAGGTGATCATCAGCCCAGGAGGACTCTTGCTTGTGGCTCAAAGCTTGGTGACTGCAACATCATaGTCTCTGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: AQQVIISPGGLLLVAQSLVTATS*SLSSVE
Trigger: CTCCACTGAGGACAGAGACAATGATGTTGCAGTCAC...CAAGCTTTGAGCCACAAGCAAGAGTCCTCCTGGGCTGATGATCACCTGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS TCA 90 bp GGAGATGGGTCACTCCAGGTGATATTGACACTGGAGGAGGTCACATaGGAAAAGTGCAAATGGGAGATAGGGCGGAAGCCTGTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GDGSLQVILTLEEVT*EKCKWEIGRKPVKA
Trigger: TGCCTTCACAGGCTTCCGCCCTATCTCCCATTTGCACTTTTCTCATGTGACCTCCTCCAGTGTCAATATCACCTGGAGTGACCCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp GAACCCACTCGCAAATTCTTGGGAGCATCAATCTCTGTTGTAAATTaGGTGCTTGAGGCTTCACTCTCATTGGTCCCCCGGACTGCGCTG +
Preference number: 5 (lower is better)
Translates to: EPTRKFLGASISVVN*VLEASLSLVPRTAL
Trigger: CAGCGCAGTCCGGGGGACCAATGAGAGTGAAGCCTCAAGCACCCAATTTACAACAGAGATTGATGCTCCCAAGAATTTGCGAGTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp GTAGTCTTGGTAGTTGGGCCAATGCCCTTGGGTACCAGCACTTCGTaGTACTGTTCACCAGCTAAGGTGCTGTACACAACCTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: VVLVVGPMPLGTSTS*YCSPAKVLYTTLYS
Trigger: GGAGTACAAGGTTGTGTACAGCACCTTAGCTGGTGAACAGTACCACGAAGTGCTGGTACCCAAGGGCATTGGCCCAACTACCAAGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGTCACTGGCTGTCAGGTaGTCAGGAGGGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLSLAVR*SGGSRR
Trigger: CCTCCTGGACCCTCCTGACAACCTGACAGCCAGTGA...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCCCCGTACTTCCCGTaGAGGTTGGTCCGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSPYFP*RLVRWQ
Trigger: CTGCCACCGGACCAACCTCAACGGGAAGTACGGGGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp AGGTTACCGTCCCATGGACAGCTACAAGGTTCACTATATATTCAGTaGCTGGCTGTAGACCCATCAAGACAGCGTGCCTCTTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: RLPSHGQLQGSLYIQ*LAVDPSRQRASWWH
Trigger: ATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAATATATAGTGAACCTTGTAGCTGTCCATGGGACGGTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp AGGTGTCCTCAGCATCCACTATCAGCTCTTTGCGGCTTCCATCGGTaGACTTGTATGTCAAGACATAGTTTTCAATCGCAGCTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: RCPQHPLSALCGFHR*TCMSRHSFQSQLWA
Trigger: CGCCCAGAGCTGCGATTGAAAACTATGTCTTGACATACAAGTCCACCGATGGAAGCCGCAAAGAGCTGATAGTGGATGCTGAGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACCAAACCAGCCTTCATaGCAGATGCAGCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKPNQPS*QMQPQD
Trigger: GTCCTGTGGCTGCATCTGCAATGAAGGCTGGTTTGG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGGAACTGCAGTCTGTaGGGCACCGGAGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGNCSL*GTGALN
Trigger: GTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCACTGGCTGTCAGGTaGTCAGGAGGGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSLAVR*SGGSRR
Trigger: CCTCCTGGACCCTCCTGACAACCTGACAGCCAGTGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GGCAGTGAATCCATGGCAGTCTCTGGTGACTGGTTGTTACTGTTATTGTTGTTGGGAGATCAGTGCGCTTaGCCTGGTGACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: GSESMAVSGDWLLLLLLLGDQCA*PGDFTG
Trigger: GCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCC...CAACAACAATAACAGTAACAACCAGTCACCAGAGACTGCCATGGATTCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS TCA 90 bp GGTTTCAGTCCTGTCTGGTTAAAGGACGTCACATCGCTGGGGAGCTaGGCAATCACCCCTCCTTCATTGTTCTTTGGAATGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: GFSPVWLKDVTSLGS*AITPPSLFFGMKLI
Trigger: GATCAGCTTCATTCCAAAGAACAATGAAGGAGGGGTGATTGCTCAGCTCCCCAGCGATGTGACGTCCTTTAACCAGACAGGACTGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 90 bp TTCACTATATATTCAGTGGCTGGCTGTAGACCCATCAAGACAGCGTaGCTCTTGGTGGCATCCAAGAGGACCTCCAACATGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FTIYSVAGCRPIKTA*LLVASKRTSNMSSS
Trigger: AGAGGAAGACATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAATATATAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 90 bp AGTCCTATCCCTGGGCACAGTGACTTCGGAGGAGATCCCAGAAGATaGGGTAAAAGTAATTCTGTAGTGATCAATGGGACCACTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SPIPGHSDFGGDPRR*GKSNSVVINGTTGL
Trigger: AAGGCCAGTGGTCCCATTGATCACTACAGAATTACTTTTACCCCATCTTCTGGGATCTCCTCCGAAGTCACTGTGCCCAGGGATAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCACAGGCAGGTACCATaGGCACATTGCCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVHRQVP*AHCPFP
Trigger: AGGGAAGGGGCAATGTGCCAATGGTACCTGCCTGTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCACAGGCAGGTACCATaGGCACATTGCCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWHRQVP*AHCPFP
Trigger: AGGGAAGGGGCAATGTGCCAATGGTACCTGCCTGTG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTCACCAAGTCTCCCTTTATTATCACCCCTCCTTCATaGTTCTTTGGAATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TSGSWEHHFAPLTKSPFIITPPS*FFGMKL
Trigger: CAGCTTCATTCCAAAGAACAATGAAGGAGGGGTGAT...AATAAAGGGAGACTTGGTGAGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAAGACAGCGTGCCTCTaGGTGGCATCCAAGAGGACC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVKTACL*VASKRT
Trigger: GGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGGAGGGTGGAGAAGTaGGTGGCAATGGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRRVEK*VAMVPL
Trigger: GAGTGGCACCATTGCCACCAACTTCTCCACCCTCCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGAGATCAGTGCGCTTaGCCTGGTGACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGDQCA*PGDFTG
Trigger: GCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAACTTCCTATGCGGATCTaGTACAGGCTTCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKLPMRI*YRLLLS
Trigger: GGACAGCAGAAGCCTGTACAAGATCCGCATAGGAAG...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS GCA 90 bp CTGCAGTGCCATTGTAACTTCCTATGCGGATCTTGTACAGGCTTCTaGTGTCCTCCACAGCGAACTTGTCATAGTAGGCAAAGACTGCTT +
Preference number: 5 (lower is better)
Translates to: LQCHCNFLCGSCTGF*CPPQRTCHSRQRLL
Trigger: AAGCAGTCTTTGCCTACTATGACAAGTTCGCTGTGGAGGACAGCAGAAGCCTGTACAAGATCCGCATAGGAAGTTACAATGGCACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCAAACCAGCCTTCATaGCAGATGCAGCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPNQPS*QMQPQD
Trigger: GTCCTGTGGCTGCATCTGCAATGAAGGCTGGTTTGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp TCTGTGAGAAAAGAGGTGGGTGATCAGTCAGGACTGGTTAGCAGGGAGCATGTACCCACTCGCAAATTCTaGGGAGCATCAATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SVRKEVGDQSGLVSREHVPTRKF*GASISV
Trigger: AACAGAGATTGATGCTCCCAAGAATTTGCGAGTGGG...TACATGCTCCCTGCTAACCAGTCCTGACTGATCACCCACCTCTTTTCTCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ATGTATCCCGGGGAAGTGCTTTGCCCCCTTTCTGAAATCCTAGGAGGAAGAAAATCACTCCAGGTGATATaGACACTGGAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: MYPGEVLCPLSEILGGRKSLQVI*TLEEVT
Trigger: TGTGACCTCCTCCAGTGTCAATATCACCTGGAGTGA...TTTTCTTCCTCCTAGGATTTCAGAAAGGGGGCAAAGCACTTCCCCGGGATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp CTCATAAGTGATTCAGTGGACATCTGGGAGCTGGGAGCACCACTTTGCCCCTCTATCAGTTTGTCCATTTaGCCGCCTCTGGAATACAAT +
Preference number: 5 (lower is better)
Translates to: LISDSVDIWELGAPLCPSISLSI*PPLEYN
Trigger: ATTGTATTCCAGAGGCGGCAAAATGGACAAACTGAT...AGAGGGGCAAAGTGGTGCTCCCAGCTCCCAGATGTCCACTGAATCACTTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS CCA 90 bp TTGATCTTGTGGGTGAAGGTAACCTGGCTTTCATGGTCTGAGGTTTaGCCTATGTATTCGGCCAGAGTATCATCTTCAGCACTCATGTCC +
Preference number: 5 (lower is better)
Translates to: LILWVKVTWLSWSEV*PMYSARVSSSALMS
Trigger: GGACATGAGTGCTGAAGATGATACTCTGGCCGAATACATAGGCCAAACCTCAGACCATGAAAGCCAGGTTACCTTCACCCACAAGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCATGGGCAGGCTTTTTaGGGGAGGTTGATCTTGTGG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVHGQAF*GRLILW
Trigger: CCACAAGATCAACCTCCCCAAAAAAGCCTGCCCATG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGGCTCTGAGCAGTTCTaGCCAAACCAGCCTTCATTG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVGSEQF*PNQPSL
Trigger: CAATGAAGGCTGGTTTGGCAAGAACTGCTCAGAGCC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTGGGAACTGCAGTCTGTaGGGCACCGGAGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVGNCSL*GTGALN
Trigger: GTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCC...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGATGGGACCACTGGCCTaGGTCCAGATGAGAGAGATA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVMGPLA*VQMREI
Trigger: TATCTCTCTCATCTGGACCAAGGCCAGTGGTCCCAT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGATGGGACCACTGGCCTaGGTCCAGATGAGAGAGATA +
Preference number: 5 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWMGPLA*VQMREI
Trigger: TATCTCTCTCATCTGGACCAAGGCCAGTGGTCCCAT...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGTACACTTGCAGCTaGTGGCTTAGCTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQYTCS*WLSSPL
Trigger: CAATGGGGAGCTAAGCCACAAGCTGCAAGTGTACTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTTCCTATGCGGATCTaGTACAGGCTTCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLPMRI*YRLLLS
Trigger: GGACAGCAGAAGCCTGTACAAGATCCGCATAGGAAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTACTTCCCGTTGAGGTaGGTCCGGTGGCAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVYFPLR*VRWQFL
Trigger: TAAGAACTGCCACCGGACCAACCTCAACGGGAAGTA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGTCACTCCAGGTGATATaGACACTGGAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVSLQVI*TLEEVT
Trigger: TGTGACCTCCTCCAGTGTCAATATCACCTGGAGTGA...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGGTGACTGCAACATCATaGTCTCTGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVVTATS*SLSSVE
Trigger: CTCCACTGAGGACAGAGACAATGATGTTGCAGTCAC...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGAGAATGAAATCAACTTaGGCTCGAGGTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVRMKST*ARGGVH
Trigger: ATGGACCCCACCTCGAGCCAAAGTTGATTTCATTCT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCCCACTCGCAAATTCTaGGGAGCATCAATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVPTRKF*GASISV
Trigger: AACAGAGATTGATGCTCCCAAGAATTTGCGAGTGGG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGATCACCCCTCCTTCATaGTTCTTTGGAATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVITPPS*FFGMKL
Trigger: CAGCTTCATTCCAAAGAACAATGAAGGAGGGGTGAT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTGCCCCGTACACTGTaGAGGCTTATTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLPRTL*RLISYS
Trigger: TGAATATGAAATAAGCCTCAACAGTGTACGGGGCAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAGGATATTAGGAGTGACTCTCACCTCTTTAGAGATAGGGTGTTAGGTAGCTGGCTGCCCCGTACACTGTaGAGGCTTATTTCATATTCA +
Preference number: 5 (lower is better)
Translates to: KDIRSDSHLFRDRVLGSWLPRTL*RLISYS
Trigger: TGAATATGAAATAAGCCTCAACAGTGTACGGGGCAG...CCAGCTACCTAACACCCTATCTCTAAAGAGGTGAGAGTCACTCCTAATATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGCAGTACACTTGCAGCTaGTGGCTTAGCTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGQYTCS*WLSSPL
Trigger: CAATGGGGAGCTAAGCCACAAGCTGCAAGTGTACTG...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp GAAGGAGTGTTCTTTAATGTTGGTCTAGGAGACAGGGTTGAGTATATTAGTGTTTACTTCCCGTTGAGGTaGGTCCGGTGGCAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: EGVFFNVGLGDRVEYISVYFPLR*VRWQFL
Trigger: TAAGAACTGCCACCGGACCAACCTCAACGGGAAGTA...AACACTAATATACTCAACCCTGTCTCCTAGACCAACATTAAAGAACACTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp ACCCAGGGAGGATGGATGAAAACCAAGCATCTTTGTGTAGCCTTGGCAAGTTTGCTAATTGTGATGTTTTaGGGAGGATCAATTCCTGTA +
Preference number: 5 (lower is better)
Translates to: TQGGWMKTKHLCVALASLLIVMF*GGSIPV
Trigger: TACAGGAATTGATCCTCCCAAAAACATCACAATTAG...CAAACTTGCCAAGGCTACACAAAGATGCTTGGTTTTCATCCATCCTCCCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGATCAGTTTGTCCATTTaGCCGCCTCTGGAATACAAT +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVISLSI*PPLEYN
Trigger: ATTGTATTCCAGAGGCGGCAAAATGGACAAACTGAT...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp CCAAGACCAACTTTGATTCTGCTTTTCTATTACAGATGGTTAAACCTAAAGGGGAGAATGAAATCAACTTaGGCTCGAGGTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: PRPTLILLFYYRWLNLKGRMKST*ARGGVH
Trigger: ATGGACCCCACCTCGAGCCAAAGTTGATTTCATTCT...CCCCTTTAGGTTTAACCATCTGTAATAGAAAAGCAGAATCAAAGTTGGTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCAGGAATGCTTTGTTTaGAGTTCATTACTGCAGATA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVQECFV*SSLLQI
Trigger: TATCTGCAGTAATGAACTCAAAACAAAGCATTCCTG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS-3UTR CAA 90 bp AAATACAAACAAATGACAGAAAAGATTGTTTGGCTGGTGGCTGGCTGCCCAGTGCTAATTGTGATGTTTTaGGGAGGATCAATTCCTGTA +
Preference number: 5 (lower is better)
Translates to: KYKQMTEKIVWLVAGCPVLIVMF*GGSIPV
Trigger: TACAGGAATTGATCCTCCCAAAAACATCACAATTAG...CACTGGGCAGCCAGCCACCAGCCAAACAATCTTTTCTGTCATTTGTTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp CCTTCCCTGAACAGTCCCCAGGGCAGCGCAGCTCCCTaGAGTCCTCGCCTGTGTAGGGCTCTTCACAGACAC +
Preference number: 6 (lower is better)
Translates to: PSLNSPQGSAAP*SPRLCRALHRH
Trigger: GTGTCTGTGAAGAGCCCTACACAGGCGAGGACTGCAGGGAGCTGCGCTGCCCTGGGGACTGTTCAGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp CTCGCCCACTGCAGGCATTCAGACACCGTCGCTGGCTaGAGTCCTCACCAGCATAGCCCTCTTGGCACAGGC +
Preference number: 6 (lower is better)
Translates to: LAHCRHSDTVAG*SPHQHSPLGTG
Trigger: GCCTGTGCCAAGAGGGCTATGCTGGTGAGGACTGCAGCCAGCGACGGTGTCTGAATGCCTGCAGTGGGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp CTAAGGGCTTGCACGGAGTACTGGCTTAAGGGAGGCTaGAGCCGGAAGGTCGTCTTCCCGCCTTCGCCACCC +
Preference number: 6 (lower is better)
Translates to: LRACTEYWLKGG*SRKVVFPPSPP
Trigger: GGGTGGCGAAGGCGGGAAGACGACCTTCCGGCTGCAGCCTCCCTTAAGCCAGTACTCCGTGCAAGCCCTTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp TCGGCCCGTCCCATTCCAGCTCAATGGACCTGTCGCTaGTACCAGCCACTCGCAAGTCCTCTGGAGGGGCAA +
Preference number: 6 (lower is better)
Translates to: SARPIPAQWTCR*YQPLASPLEGQ
Trigger: TTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTGAGCTGGAATGGGACGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000192457.2
CDS GCA 72 bp GCAGCTCTGGGCGGCTGCCAGGAGATCAGTGCGCTTTaGCTGGTGACTTCACTGGCTGTCAGGTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: AALGGCQEISAL*LVTSLAVRLSG
Trigger: TCCTGACAACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCCTGGCAGCCGCCCAGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CACAAATGCACTGGCCATCGACACACACACCCCGACTaGAGCAGCCCAGTGGGCAGTAGGGCTCTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: HKCTGHRHTHPD*SSPVGSRALSS
Trigger: ACTGCTCAGAGCCCTACTGCCCACTGGGCTGCTCCAGTCGGGGTGTGTGTGTCGATGGCCAGTGCATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CACCAGCATAGCCCTCTTGGCACAGGCAGGTACCATTaGCACATTGCCCCTTCCCTGAACAGTCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: HQHSPLGTGRYH*HIAPSLNSPQG
Trigger: GCCCTGGGGACTGTTCAGGGAAGGGGCAATGTGCCAATGGTACCTGCCTGTGCCAAGAGGGCTATGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp GGACCTGTCGCTGATACCAGCCACTCGCAAGTCCTCTaGAGGGGCAACTGTGGCAGCGCTTTCCTGACAGCA +
Preference number: 6 (lower is better)
Translates to: GPVADTSHSQVL*RGNCGSAFLTA
Trigger: TGCTGTCAGGAAAGCGCTGCCACAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS CAA 72 bp CCCCATCCACACAGAGCCCTCGGGAACTGCAGTCTGTaGGGCACCGGAGCTCTGAACAGTCATCTCCGCTGT +
Preference number: 6 (lower is better)
Translates to: PHPHRALGNCSL*GTGALNSHLRC
Trigger: ACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCTGTGTGGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp TCAGTAGCTGGATACAGCCTGGTGATGGCGAACTCTGTCACGGTGTaGGGCACTACGGAGCTGTCTAGCCGTCCCACTTGGGTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: SVAGYSLVMANSVTV*GTTELSSRPTWVGR
Trigger: CCGACCCACCCAAGTGGGACGGCTAGACAGCTCCGTAGTGCCCAACACCGTGACAGAGTTCGCCATCACCAGGCTGTATCCAGCTACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp GAGGGGCAACTGTGGCAGCGCTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCAGCAAGGACACCTCCC +
Preference number: 6 (lower is better)
Translates to: EGQLWQRFPDSS*YCTGLAARTPP
Trigger: GGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGTTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS CAA 72 bp GGATACAGCCTGGTGATGGCGAACTCTGTCACGGTGTaGGGCACTACGGAGCTGTCTAGCCGTCCCACTTGG +
Preference number: 6 (lower is better)
Translates to: GYSLVMANSVTV*GTTELSSRPTW
Trigger: CCAAGTGGGACGGCTAGACAGCTCCGTAGTGCCCAACACCGTGACAGAGTTCGCCATCACCAGGCTGTATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp GTTTTCAATCGCAGCTCTGGGCGGCTGCCAGGAGATCAGTGCGCTTaGCCTGGTGACTTCACTGGCTGTCAGGTTGTCAGGAGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: VFNRSSGRLPGDQCA*PGDFTGCQVVRRVQ
Trigger: CTGGACCCTCCTGACAACCTGACAGCCAGTGAAGTCACCAGGCAAAGCGCACTGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GTCCTGTGGCAGCGCTTTCCTGACAGCAGTTGGTATTaGACTGGTCTCGCAGCAAGGACACCTCCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: VLWQRFPDSSWY*TGLAARTPPSP
Trigger: TGGAGAGGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GGCCGTCGGCTGGTAAGAGATCACATATTCCGTCACTaGCATCGGCCCGTCCCATTCCAGCTCAATGGACCT +
Preference number: 6 (lower is better)
Translates to: GRRLVRDHIFRH*HRPVPFQLNGP
Trigger: AGGTCCATTGAGCTGGAATGGGACGGGCCGATGGCAGTGACGGAATATGTGATCTCTTACCAGCCGACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000192457.2
CDS CCA 72 bp CCAGTTGTCCTGTGGCAGCGCTTTCCTGACAGCAGTTaGTATTGCACTGGTCTCGCAGCAAGGACACCTCCC +
Preference number: 6 (lower is better)
Translates to: PVVLWQRFPDSS*YCTGLAARTPP
Trigger: GGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGGACAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp AAGTCCTCTGGAGGGGCAACTGTGGCAGCGCTTTCCTaGCAGCAGTTGGTATTGCACTGGTCTCGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: KSSGGATVAALS*QQLVLHWSRSK
Trigger: CTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGTTGCCCCTCCAGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS GCA 72 bp AGACACATTCCCCATCCACACAGAGCCCTCGGGAACTaGAGTCTGTTGGGCACCGGAGCTCTGAACAGTCAT +
Preference number: 6 (lower is better)
Translates to: RHIPHPHRALGN*SLLGTGALNSH
Trigger: ATGACTGTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCTGTGTGGATGGGGAATGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GGCCTCGCTGTTATCCCATTCCAGGTCAAGGCTAGTTaGTGTGCGGGAACCCACTCGCAAATTCTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: GLAVIPFQVKAS*CAGTHSQILGS
Trigger: GCTCCCAAGAATTTGCGAGTGGGTTCCCGCACAGCAACTAGCCTTGACCTGGAATGGGATAACAGCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp CAACTGTGGCAGCGCTTTCCTGACAGCAGTTGGTATTaGACTGGTCTCGCAGCAAGGACACCTCCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: QLWQRFPDSSWY*TGLAARTPPSP
Trigger: TGGAGAGGGAGGTGTCCTTGCTGCGAGACCAGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS CCA 72 bp CAGTCATCTCCGCTGTATTCACTGTCACAAATGCACTaGCCATCGACACACACACCCCGACTGGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: QSSPLYSLSQMH*PSTHTPRLEQP
Trigger: GGGCTGCTCCAGTCGGGGTGTGTGTGTCGATGGCCAGTGCATTTGTGACAGTGAATACAGCGGAGATGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp TACCAGCCACTCGCAAGTCCTCTGGAGGGGCAACTGTaGCAGCGCTTTCCTGACAGCAGTTGGTATTGCACT +
Preference number: 6 (lower is better)
Translates to: YQPLASPLEGQL*QRFPDSSWYCT
Trigger: AGTGCAATACCAACTGCTGTCAGGAAAGCGCTGCCACAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192457.2
CDS CAA 72 bp GTGGCTGGCTGTAGACCCATCAAGACAGCGTGCCTCTaGGTGGCATCCAAGAGGACCTCCAACATGTCTTCC +
Preference number: 6 (lower is better)
Translates to: VAGCRPIKTACL*VASKRTSNMSS
Trigger: GGAAGACATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp AGACACATTCCCCATCCACACAGAGCCCTCGGGAACTGCAGTCTGTaGGGCACCGGAGCTCTGAACAGTCATCTCCGCTGTATTCACTGT +
Preference number: 6 (lower is better)
Translates to: RHIPHPHRALGNCSL*GTGALNSHLRCIHC
Trigger: ACAGTGAATACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCCGAGGGCTCTGTGTGGATGGGGAATGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp AAGCCTGTGAAGGCATCCACAGTAGACTCCAGGCTCTaGTGCCGACCCCTCTCAGCAGTGATGGAGATAATG +
Preference number: 6 (lower is better)
Translates to: KPVKASTVDSRL*CRPLSAVMEIM
Trigger: CATTATCTCCATCACTGCTGAGAGGGGTCGGCAGCAGAGCCTGGAGTCTACTGTGGATGCCTTCACAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp GCTGAGGCCTCCAGCCCCGAGGAGCAGAGGCTTTCAAGTGGCACGTaGATGTTATACACATGGTTGAAGACCATAGGCTGTTCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: AEASSPEEQRLSSGT*MLYTWLKTIGCSLL
Trigger: CAGCAAGGAACAGCCTATGGTCTTCAACCATGTGTATAACATCAACGTGCCACTTGAAAGCCTCTGCTCCTCGGGGCTGGAGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000193325.2
CDS CAA 90 bp CCAACTCCATACTCTGTGCCTGGAACCAGATCTGTGAGGGTAGTCTaGGTAGTTGGGCCAATGCCCTTGGGTACCAGCACTTCGTGGTAC +
Preference number: 6 (lower is better)
Translates to: PTPYSVPGTRSVRVV*VVGPMPLGTSTSWY
Trigger: GTACCACGAAGTGCTGGTACCCAAGGGCATTGGCCCAACTACCAAGACTACCCTCACAGATCTGGTTCCAGGCACAGAGTATGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp CCCTCGGGAACTGCAGTCTGTTGGGCACCGGAGCTCTaGACAGTCATCTCCGCTGTATTCACTGTCACAAAT +
Preference number: 6 (lower is better)
Translates to: PSGTAVCWAPEL*TVISAVFTVTN
Trigger: ATTTGTGACAGTGAATACAGCGGAGATGACTGTTCAGAGCTCCGGTGCCCAACAGACTGCAGTTCCCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp TATTCAGTGGCTGGCTGTAGACCCATCAAGACAGCGTaGCTCTTGGTGGCATCCAAGAGGACCTCCAACATG +
Preference number: 6 (lower is better)
Translates to: YSVAGCRPIKTA*LLVASKRTSNM
Trigger: CATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GTCCTCCACAGCGAACTTGTCATAGTAGGCAAAGACTaGTTCCTGTCCATCCCGCATATCCACACGCAGCTC +
Preference number: 6 (lower is better)
Translates to: VLHSELVIVGKD*FLSIPHIHTQL
Trigger: GAGCTGCGTGTGGATATGCGGGATGGACAGGAAGCAGTCTTTGCCTACTATGACAAGTTCGCTGTGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp GTAGTTGGGCCAATGCCCTTGGGTACCAGCACTTCGTaGTACTGTTCACCAGCTAAGGTGCTGTACACAACC +
Preference number: 6 (lower is better)
Translates to: VVGPMPLGTSTS*YCSPAKVLYTT
Trigger: GGTTGTGTACAGCACCTTAGCTGGTGAACAGTACCACGAAGTGCTGGTACCCAAGGGCATTGGCCCAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp GTCCCTGGGGCTGTAGTTCAGAATGAGTCTGTCTGCTaGGGGAGATGGGTCACTCCAGGTGATATTGACACT +
Preference number: 6 (lower is better)
Translates to: VPGAVVQNESVC*GRWVTPGDIDT
Trigger: AGTGTCAATATCACCTGGAGTGACCCATCTCCCCCAGCAGACAGACTCATTCTGAACTACAGCCCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CTGGCTGTAGACCCATCAAGACAGCGTGCCTCTTGGTaGCATCCAAGAGGACCTCCAACATGTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LAVDPSRQRASW*HPRGPPTCLPL
Trigger: AAGAGGAAGACATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp CTTGGGAGCATCAATCTCTGTTGTAAATTGGGTGCTTaGGGCTTCACTCTCATTGGTCCCCCGGACTGCGCT +
Preference number: 6 (lower is better)
Translates to: LGSINLCCKLGA*GFTLIGPPDCA
Trigger: AGCGCAGTCCGGGGGACCAATGAGAGTGAAGCCTCAAGCACCCAATTTACAACAGAGATTGATGCTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp TGTCCTCAGTGGAGAAAGGACGTCCCTGGTGATAGCTaGGGGAGTCTCCTGCAGTGCCATTGTAACTTCCTA +
Preference number: 6 (lower is better)
Translates to: CPQWRKDVPGDS*GSLLQCHCNFL
Trigger: TAGGAAGTTACAATGGCACTGCAGGAGACTCCCTCAGCTATCACCAGGGACGTCCTTTCTCCACTGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GTACCAGCACTTCGTGGTACTGTTCACCAGCTAAGGTaGTGTACACAACCTTGTACTCCTGAGCTTCGGCCT +
Preference number: 6 (lower is better)
Translates to: VPALRGTVHQLR*CTQPCTPELRP
Trigger: AGGCCGAAGCTCAGGAGTACAAGGTTGTGTACAGCACCTTAGCTGGTGAACAGTACCACGAAGTGCTGGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp AATGACAGCGTAGACGCTGATGTTGTAGGTGAGACCTaGCTCCAGCTCCATGATGGTGACACCACTCCAATC +
Preference number: 6 (lower is better)
Translates to: NDSVDADVVGET*LQLHDGDTTPI
Trigger: GATTGGAGTGGTGTCACCATCATGGAGCTGGAGCCAGGTCTCACCTACAACATCAGCGTCTACGCTGTCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000192457.2
CDS CCA 72 bp ACTTGTATGTCAAGACATAGTTTTCAATCGCAGCTCTaGGCGGCTGCCAGGAGATCAGTGCGCTTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: TCMSRHSFQSQL*AAARRSVRFAW
Trigger: CCAGGCAAAGCGCACTGATCTCCTGGCAGCCGCCCAGAGCTGCGATTGAAAACTATGTCTTGACATACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp AGTACCTGGGAAGAGCTTGCACATGGGCAGGCTTTTTaGGGGAGGTTGATCTTGTGGGTGAAGGTAACCTGG +
Preference number: 6 (lower is better)
Translates to: STWEELAHGQAF*GRLILWVKVTW
Trigger: CCAGGTTACCTTCACCCACAAGATCAACCTCCCCAAAAAAGCCTGCCCATGTGCAAGCTCTTCCCAGGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp AGTTCCTGCAGTACCTGGGAAGAGCTTGCACATGGGCAGGCTTTTTaGGGGAGGTTGATCTTGTGGGTGAAGGTAACCTGGCTTTCATGG +
Preference number: 6 (lower is better)
Translates to: SSCSTWEELAHGQAF*GRLILWVKVTWLSW
Trigger: CCATGAAAGCCAGGTTACCTTCACCCACAAGATCAACCTCCCCAAAAAAGCCTGCCCATGTGCAAGCTCTTCCCAGGTACTGCAGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp ACCAGGGTGCAGATGCGTTCACTCTCCTCCCTGCCCCGTACACTGTaGAGGCTTATTTCATATTCAGTAGCTGGATACAGCCTGGTGATG +
Preference number: 6 (lower is better)
Translates to: TRVQMRSLSSLPRTL*RLISYSVAGYSLVM
Trigger: CATCACCAGGCTGTATCCAGCTACTGAATATGAAATAAGCCTCAACAGTGTACGGGGCAGGGAGGAGAGTGAACGCATCTGCACCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp ATATATTCAGTGGCTGGCTGTAGACCCATCAAGACAGCGTGCCTCTaGGTGGCATCCAAGAGGACCTCCAACATGTCTTCCTCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: IYSVAGCRPIKTACL*VASKRTSNMSSSLS
Trigger: GGACAAAGAGGAAGACATGTTGGAGGTCCTCTTGGATGCCACCAAGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAATATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp CCTGTCTGGTTAAAGGACGTCACATCGCTGGGGAGCTaGGCAATCACCCCTCCTTCATTGTTCTTTGGAATG +
Preference number: 6 (lower is better)
Translates to: PVWLKDVTSLGS*AITPPSLFFGM
Trigger: CATTCCAAAGAACAATGAAGGAGGGGTGATTGCTCAGCTCCCCAGCGATGTGACGTCCTTTAACCAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp CACAGTACACTTGCAGCTTGTGGCTTAGCTCCCCATTaGGGAAGATGGTGTAAACGCCACTCAGAGTGTCTC +
Preference number: 6 (lower is better)
Translates to: HSTLAACGLAPH*GRWCKRHSECL
Trigger: GAGACACTCTGAGTGGCGTTTACACCATCTTCCTCAATGGGGAGCTAAGCCACAAGCTGCAAGTGTACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp CTTTCTGTAGTCACCTCCAGCCGACACTCAGAAGGCTaGAGCATGGATCCCAACAGGATCAGGTTTACACCA +
Preference number: 6 (lower is better)
Translates to: LSVVTSSRHSEG*SMDPNRIRFTP
Trigger: TGGTGTAAACCTGATCCTGTTGGGATCCATGCTCAAGCCTTCTGAGTGTCGGCTGGAGGTGACTACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
ENSMUST00000193325.2
CDS CAA 72 bp GCTTTCCACTGGAGCAAGGCTTCTGTAGGTGTGATGTaGGTAGCGATCAAATCCATGGGGCTATCCATGGCT +
Preference number: 6 (lower is better)
Translates to: AFHWSKASVGVM*VAIKSMGLSMA
Trigger: AGCCATGGATAGCCCCATGGATTTGATCGCTACCAACATCACACCTACAGAAGCCTTGCTCCAGTGGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp TCCAGGTCAAGGCTAGTTGCTGTGCGGGAACCCACTCGCAAATTCTaGGGAGCATCAATCTCTGTTGTAAATTGGGTGCTTGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SRSRLVAVREPTRKF*GASISVVNWVLEAS
Trigger: TGAAGCCTCAAGCACCCAATTTACAACAGAGATTGATGCTCCCAAGAATTTGCGAGTGGGTTCCCGCACAGCAACTAGCCTTGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp TCACTCCAGGTGATATTGACACTGGAGGAGGTCACATaGGAAAAGTGCAAATGGGAGATAGGGCGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: SLQVILTLEEVT*EKCKWEIGRKP
Trigger: AGGCTTCCGCCCTATCTCCCATTTGCACTTTTCTCATGTGACCTCCTCCAGTGTCAATATCACCTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CGCAAATTCTTGGGAGCATCAATCTCTGTTGTAAATTaGGTGCTTGAGGCTTCACTCTCATTGGTCCCCCGG +
Preference number: 6 (lower is better)
Translates to: RKFLGASISVVN*VLEASLSLVPR
Trigger: CCGGGGGACCAATGAGAGTGAAGCCTCAAGCACCCAATTTACAACAGAGATTGATGCTCCCAAGAATTTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp TCCCATGGACAGCTACAAGGTTCACTATATATTCAGTaGCTGGCTGTAGACCCATCAAGACAGCGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: SHGQLQGSLYIQ*LAVDPSRQRAS
Trigger: AGAGGCACGCTGTCTTGATGGGTCTACAGCCAGCCACTGAATATATAGTGAACCTTGTAGCTGTCCATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp CAGATGCGTTCACTCTCCTCCCTGCCCCGTACACTGTaGAGGCTTATTTCATATTCAGTAGCTGGATACAGC +
Preference number: 6 (lower is better)
Translates to: QMRSLSSLPRTL*RLISYSVAGYS
Trigger: GCTGTATCCAGCTACTGAATATGAAATAAGCCTCAACAGTGTACGGGGCAGGGAGGAGAGTGAACGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp GATCTTGTGGGTGAAGGTAACCTGGCTTTCATGGTCTaGGGTTTGGCCTATGTATTCGGCCAGAGTATCATC +
Preference number: 6 (lower is better)
Translates to: DLVGEGNLAFMV*GLAYVFGQSII
Trigger: GATGATACTCTGGCCGAATACATAGGCCAAACCTCAGACCATGAAAGCCAGGTTACCTTCACCCACAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp GAGGACGATGACATAATTTTCCACTTCACCCATGGGTaGTTTCCACTGGAGCAAGGCTTCTGTAGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: EDDDIIFHFTHG*FPLEQGFCRCD
Trigger: ATCACACCTACAGAAGCCTTGCTCCAGTGGAAAGCACCCATGGGTGAAGTGGAAAATTATGTCATCGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp TGGGTGAAGGTAACCTGGCTTTCATGGTCTGAGGTTTaGCCTATGTATTCGGCCAGAGTATCATCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: WVKVTWLSWSEV*PMYSARVSSSA
Trigger: TGCTGAAGATGATACTCTGGCCGAATACATAGGCCAAACCTCAGACCATGAAAGCCAGGTTACCTTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp AGGTTGATCTTGTGGGTGAAGGTAACCTGGCTTTCATaGTCTGAGGTTTGGCCTATGTATTCGGCCAGAGTA +
Preference number: 6 (lower is better)
Translates to: RLILWVKVTWLS*SEVWPMYSARV
Trigger: TACTCTGGCCGAATACATAGGCCAAACCTCAGACCATGAAAGCCAGGTTACCTTCACCCACAAGATCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CCGTACACTGTTGAGGCTTATTTCATATTCAGTAGCTaGATACAGCCTGGTGATGGCGAACTCTGTCACGGT +
Preference number: 6 (lower is better)
Translates to: PYTVEAYFIFSS*IQPGDGELCHG
Trigger: ACCGTGACAGAGTTCGCCATCACCAGGCTGTATCCAGCTACTGAATATGAAATAAGCCTCAACAGTGTACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp AGGCTAGTTGCTGTGCGGGAACCCACTCGCAAATTCTaGGGAGCATCAATCTCTGTTGTAAATTGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: RLVAVREPTRKF*GASISVVNWVL
Trigger: AAGCACCCAATTTACAACAGAGATTGATGCTCCCAAGAATTTGCGAGTGGGTTCCCGCACAGCAACTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp GAGCTCCAGGACACCGTCAGGGAGTCCTTAGTCACGTaGCTAATTGTGATGTTTTTGGGAGGATCAATTCCT +
Preference number: 6 (lower is better)
Translates to: ELQDTVRESLVT*LIVMFLGGSIP
Trigger: AGGAATTGATCCTCCCAAAAACATCACAATTAGCAACGTGACTAAGGACTCCCTGACGGTGTCCTGGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp GCAACAGGAGAGCTCCAGGACACCGTCAGGGAGTCCTTAGTCACGTaGCTAATTGTGATGTTTTTGGGAGGATCAATTCCTGTAGTGATA +
Preference number: 6 (lower is better)
Translates to: ATGELQDTVRESLVT*LIVMFLGGSIPVVI
Trigger: TATCACTACAGGAATTGATCCTCCCAAAAACATCACAATTAGCAACGTGACTAAGGACTCCCTGACGGTGTCCTGGAGCTCTCCTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS GCA 72 bp CATTGTAACTTCCTATGCGGATCTTGTACAGGCTTCTaGTGTCCTCCACAGCGAACTTGTCATAGTAGGCAA +
Preference number: 6 (lower is better)
Translates to: HCNFLCGSCTGF*CPPQRTCHSRQ
Trigger: TTGCCTACTATGACAAGTTCGCTGTGGAGGACAGCAGAAGCCTGTACAAGATCCGCATAGGAAGTTACAATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp TTTTTGGGGAGGTTGATCTTGTGGGTGAAGGTAACCTaGCTTTCATGGTCTGAGGTTTGGCCTATGTATTCG +
Preference number: 6 (lower is better)
Translates to: FLGRLILWVKVT*LSWSEVWPMYS
Trigger: CGAATACATAGGCCAAACCTCAGACCATGAAAGCCAGGTTACCTTCACCCACAAGATCAACCTCCCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp CAGCATCCACTATCAGCTCTTTGCGGCTTCCATCGGTaGACTTGTATGTCAAGACATAGTTTTCAATCGCAG +
Preference number: 6 (lower is better)
Translates to: QHPLSALCGFHR*TCMSRHSFQSQ
Trigger: CTGCGATTGAAAACTATGTCTTGACATACAAGTCCACCGATGGAAGCCGCAAAGAGCTGATAGTGGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 90 bp GACACCGTCAGGGAGTCCTTAGTCACGTTGCTAATTGTGATGTTTTaGGGAGGATCAATTCCTGTAGTGATAGAACCCACTATGGGTTCA +
Preference number: 6 (lower is better)
Translates to: DTVRESLVTLLIVMF*GGSIPVVIEPTMGS
Trigger: TGAACCCATAGTGGGTTCTATCACTACAGGAATTGATCCTCCCAAAAACATCACAATTAGCAACGTGACTAAGGACTCCCTGACGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CCA 72 bp ATAGAACCCACTATGGGTTCAGAGGTTACCGTCCCATaGACAGCTACAAGGTTCACTATATATTCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: IEPTMGSEVTVP*TATRFTIYSVA
Trigger: AGCCACTGAATATATAGTGAACCTTGTAGCTGTCCATGGGACGGTAACCTCTGAACCCATAGTGGGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS CAA 72 bp AGGGAGTCCTTAGTCACGTTGCTAATTGTGATGTTTTaGGGAGGATCAATTCCTGTAGTGATAGAACCCACT +
Preference number: 6 (lower is better)
Translates to: RESLVTLLIVMF*GGSIPVVIEPT
Trigger: AGTGGGTTCTATCACTACAGGAATTGATCCTCCCAAAAACATCACAATTAGCAACGTGACTAAGGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6
CDS TCA 72 bp AGTCCTGGCATTCATAGTGGCAGGAATGCTTTGTTTTaGGTTCATTACTGCAGATATTCCAACTCCATACTC +
Preference number: 6 (lower is better)
Translates to: SPGIHSGRNALF*VHYCRYSNSIL
Trigger: GAGTATGGAGTTGGAATATCTGCAGTAATGAACTCAAAACAAAGCATTCCTGCCACTATGAATGCCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111669.9
ENSMUST00000192069.6